Rorug03G0160600

Protein downstream neighbor of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0005886
Physical Location & Seq
Forward (+)
13307698 .. 13312758
5061 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0160600.1

Sequence Viewer

Length: 1638 bp
ATGCTCAACACCGCCAACGGTATGATGTCATCAACGGCTTCGTCGTCGTCGGCCAACAACAGCGCTCAGTCGCCGGGGCTTAAGACCTATTTCAAGACCCCCGAGGGAAGGTACAAGCTTCAGTACGAGAAGGCTCACCCTTCCGGTCTTCTTCACTACCCTCATGGCAAAACTGTCACTCAGGTAACGTTAGCGCATCTTAAGGACAAGCCTGCCCCAACAACCCCGACCGCACCATCTTCAAGCTTCAGCACTAGCAGTGGTGTGCGGTCAGCTGCAGCAAGGTTGTTGGGTGCTAGTAATGGGAGCAGGCTTAGCTTTGTTGGAGGGAATGGTGTGAGTAAGAGTGTTAGCGCGAGTAGTAGAGTTGGGTCTTTGGTGGCTTCCAGTTCAAGTAATTCAACTTCTACTTCCAACTTTGATGGGAAAGGGTCTTACTTGATCTTCAATGTGGGAGATGCAATCTTCATTAGTGATTTGAATACTCAAGACAAGGATCCAATAAAGTCTATACATTTCAGTACTTCAAACCCTGTGTGCCATGCATTTGATCAAGATGCAAAGGATGGTCATGATTTGATTATTGGATTGAATTCCGGCGATGTCTACTCAGTGTCACTGAGACAACAATTACAGGATGTTGGAAAGAAGCTTGTTGGTGCTCAGCATTATAACAAAGATGGTTCTGTTAGTAATAGCCGTTGTACTAGTATTGCATGGGTTCCTGGTGGTGATGGCTCTTTTGTTGTTGCTCATGCTGATGGGAATCTGTATGTATATGAAAAGAGCAAAGATGGTGCAGGCGATACTTCTTTCCCTGTTATAAAAGATCAATCTCAATTTTCTGTTGCACATGCACGTTACAGTAAGAGTAACCCAATTGCCAGATGGCATATATGCTTAGGTTCAATTAATAGTATTGCTTTCTCAACTGATGGAGCTTATCTAGCAACTGTTGGAAGAGATGGTTATCTACGTGTTTTTGACTACTCAAAAGAGCAACTTGTATGTGGTGGCAAAAGTTACTATGGTGCTCAGCTATGTTGCGCTTGGAGCACGGATGGAAAATACATACTGGCAGGAGGTGAAGATGATCTGGTTCAAGTTTGGAGTATGGAAGATCGGAAAGTTGTAGCTTGGGGAGAGGGGCACAATTCTTGGGTCAGTGGAGTGGCGTTTGATTCATATTCAGAAGGTATCGGGGAAACTGTCATGTACCGGTTTGGTTCCGTCGGTCAGGACACACAGTTACTTCTGTGGGACCTGGAAATGGATGAGATTGTGGTGCCATTGCGCCGATGCCCTCCAGGTGGCTCCCCCACATATAGTACTGGAAGCCAGTCATCTCATTGGGACAATGCACTACCAGTGGGTACGTTGCAGCCTGCTCCAAGCATGCGAGATGTTCCAAAGATCTCACCGCTTGTTGCTCACCGTGTGCACACTGAACCTCTCTCCGGCGTGATGTTTACACAAGAATCTGTTCTTACTGTCTGCCGAGAAGGGAATATTAAAATTTGGATGAGACCTGGGGTTTCAGAAAGCCAATCAAGCAATGGGGAAACCGTGTTAAGTCCCAGCTTGAAGGAGAAGCCTTTGCTGTCAAGCAAGGTTGGCAGTGCCAGTCATAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

545

Amino Acids

58.17

Weight (kDa)

7.25

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_Nup120_160 PF11715 152 - 337 2.3e-06 Nucleoporin Nup120/160, beta-propeller domain
WD40_Prp19 PF24814 235 - 423 2.6e-09 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 291 - 427 6e-11 WDR3 first beta-propeller domain
WDR55 PF24796 293 - 395 1.4e-06 WDR55
Beta-prop_TEP1_2nd PF25047 301 - 425 5.5e-09 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 303 - 424 1.9e-13 WDR5 beta-propeller domain
WD40_MABP1-WDR62_1st PF24780 303 - 394 4.5e-06 MABP1/WDR62 first WD40 domain
Beta-prop_EML_2 PF23414 307 - 395 2.2e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_THOC3 PF25174 348 - 428 3.7e-08 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 672, 824
AccB1I GGYRCC 1 cut(s) 1285
AccI GTMKAC 1 cut(s) 606
AccII CGCG 1 cut(s) 356
AciI CCGC 4 cut(s) 12, 231, 268, 1421
AclI AACGTT 1 cut(s) 188
AclWI GGATC 2 cut(s) 491, 504
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 2 cut(s) 592, 1515
AcuI CTGAAG 2 cut(s) 104, 232
AdeI CACNNNGTG 1 cut(s) 1438
AfaI GTAC 7 cut(s) 113, 125, 523, 706, 1217, 1330, 1375
AfeI AGCGCT 1 cut(s) 64
AfiI CCNNNNNNNGG 4 cut(s) 108, 1270, 1310, 1457
AflII CTTAAG 2 cut(s) 80, 200
AflIII ACRYGT 1 cut(s) 976
AgeI ACCGGT 1 cut(s) 1218
AhlI ACTAGT 1 cut(s) 707
AjnI CCWGG 4 cut(s) 724, 1263, 1306, 1528
AluBI AGCT 9 cut(s) 118, 246, 275, 318, 652, 941, 1039, 1136, 1581
AluI AGCT 9 cut(s) 118, 246, 275, 318, 652, 941, 1039, 1136, 1581
Alw21I GWGCWC 4 cut(s) 664, 1036, 1058, 1443
Alw26I GTCTC 2 cut(s) 616, 1519
Alw44I GTGCAC 1 cut(s) 1439
AlwI GGATC 2 cut(s) 491, 504
Ama87I CYCGRG 1 cut(s) 101
Aor51HI AGCGCT 1 cut(s) 64
AoxI GGCC 1 cut(s) 51
ApaLI GTGCAC 1 cut(s) 1439
ApeKI GCWGC 3 cut(s) 275, 278, 1381
ApoI RAATTY 2 cut(s) 592, 1515
AseI ATTAAT 1 cut(s) 912
AsiGI ACCGGT 1 cut(s) 1218
Asp700I GAANNNNTTC 1 cut(s) 1482
AspLEI GCGC 5 cut(s) 65, 196, 356, 1049, 1296
AspS9I GGNCC 1 cut(s) 1261
AsuC2I CCSGG 1 cut(s) 75
AsuHPI GGTGA 5 cut(s) 128, 743, 1097, 1410, 1424
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 1 cut(s) 1261
BaeGI GKGCMC 2 cut(s) 1152, 1443
BamHI GGATCC 1 cut(s) 496
BanI GGYRCC 1 cut(s) 1285
BarI GAAGNNNNNNTAC 2 cut(s) 388, 420
BbsI GAAGAC 1 cut(s) 140
Bbv12I GWGCWC 4 cut(s) 664, 1036, 1058, 1443
BbvI GCAGC 3 cut(s) 262, 290, 1393
BceAI ACGGC 2 cut(s) 51, 684
BciT130I CCWGG 4 cut(s) 726, 1265, 1308, 1530
BclI TGATCA 1 cut(s) 550
BcnI CCSGG 1 cut(s) 75
BcoDI GTCTC 2 cut(s) 616, 1519
BcuI ACTAGT 1 cut(s) 707
BfaI CTAG 4 cut(s) 255, 297, 708, 947
BfmI CTRYAG 1 cut(s) 276
BfoI RGCGCY 1 cut(s) 66
BfrI CTTAAG 2 cut(s) 80, 200
BglII AGATCT 1 cut(s) 1413
BisI GCNGC 3 cut(s) 276, 279, 1382
BlpI GCTNAGC 3 cut(s) 314, 663, 1035
BlsI GCNGC 3 cut(s) 277, 280, 1383
BmcAI AGTACT 2 cut(s) 523, 1330
Bme1390I CCNGG 5 cut(s) 75, 726, 1265, 1308, 1530
Bme18I GGWCC 1 cut(s) 1261
BmeT110I CYCGRG 1 cut(s) 101
BmgT120I GGNCC 1 cut(s) 1261
BmiI GGNNCC 6 cut(s) 498, 723, 1228, 1262, 1287, 1315
BmrFI CCNGG 5 cut(s) 75, 726, 1265, 1308, 1530
BmsI GCATC 4 cut(s) 205, 448, 547, 1289
BpiI GAAGAC 1 cut(s) 140
BpmI CTGGAG 1 cut(s) 1290
Bpu10I CCTNAGC 1 cut(s) 901
Bpu1102I GCTNAGC 3 cut(s) 314, 663, 1035
BpuEI CTTGAG 1 cut(s) 471
BpuMI CCSGG 1 cut(s) 75
BsaAI YACGTR 1 cut(s) 977
BsaBI GATNNNNATC 2 cut(s) 765, 969
BsaI GGTCTC 1 cut(s) 1519
BsaJI CCNNGG 3 cut(s) 74, 102, 1529
BsaWI WCCGGW 2 cut(s) 143, 1218
Bsc4I CCNNNNNNNGG 4 cut(s) 108, 1270, 1310, 1457
Bse118I RCCGGY 1 cut(s) 1218
Bse1I ACTGG 6 cut(s) 387, 1080, 1336, 1339, 1367, 1623
Bse3DI GCAATG 2 cut(s) 1289, 1561
Bse8I GATNNNNATC 2 cut(s) 765, 969
BseBI CCWGG 4 cut(s) 726, 1265, 1308, 1530
BseDI CCNNGG 3 cut(s) 74, 102, 1529
BseGI GGATG 5 cut(s) 571, 643, 1066, 1279, 1527
BseJI GATNNNNATC 2 cut(s) 765, 969
BseLI CCNNNNNNNGG 4 cut(s) 108, 1270, 1310, 1457
BseMI GCAATG 2 cut(s) 1289, 1561
BseMII CTCAG 6 cut(s) 80, 194, 611, 624, 677, 1049
BseNI ACTGG 6 cut(s) 387, 1080, 1336, 1339, 1367, 1623
BseSI GKGCMC 2 cut(s) 1152, 1443
BseXI GCAGC 3 cut(s) 262, 290, 1393
BseYI CCCAGC 1 cut(s) 1577
BsgI GTGCAG 1 cut(s) 819
Bsh1236I CGCG 1 cut(s) 356
Bsh1285I CGRYCG 1 cut(s) 231
BshFI GGCC 1 cut(s) 53
BshNI GGYRCC 1 cut(s) 1285
BshTI ACCGGT 1 cut(s) 1218
BsiEI CGRYCG 1 cut(s) 231
BsiHKAI GWGCWC 4 cut(s) 664, 1036, 1058, 1443
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 5 cut(s) 74, 144, 597, 1219, 1458
BslFI GGGAC 3 cut(s) 1274, 1367, 1560
BslI CCNNNNNNNGG 4 cut(s) 108, 1270, 1310, 1457
BsmAI GTCTC 2 cut(s) 616, 1519
BsmFI GGGAC 3 cut(s) 1274, 1367, 1560
BsnI GGCC 1 cut(s) 53
Bso31I GGTCTC 1 cut(s) 1519
BsoBI CYCGRG 1 cut(s) 101
Bsp1286I GDGCHC 5 cut(s) 664, 1036, 1058, 1152, 1443
Bsp143I GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
Bsp1720I GCTNAGC 3 cut(s) 314, 663, 1035
BspACI CCGC 4 cut(s) 12, 231, 268, 1421
BspANI GGCC 1 cut(s) 53
BspCNI CTCAG 6 cut(s) 79, 193, 612, 623, 676, 1048
BspFNI CGCG 1 cut(s) 356
BspHI TCATGA 1 cut(s) 571
BspLI GGNNCC 6 cut(s) 498, 723, 1228, 1262, 1287, 1315
BspMAI CTGCAG 1 cut(s) 280
BspPI GGATC 2 cut(s) 491, 504
BspT107I GGYRCC 1 cut(s) 1285
BspTI CTTAAG 2 cut(s) 80, 200
BspTNI GGTCTC 1 cut(s) 1519
BsrDI GCAATG 2 cut(s) 1289, 1561
BsrFI RCCGGY 1 cut(s) 1218
BsrI ACTGG 6 cut(s) 387, 1080, 1336, 1339, 1367, 1623
BssAI RCCGGY 1 cut(s) 1218
BssECI CCNNGG 3 cut(s) 74, 102, 1529
BssMI GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
Bst2UI CCWGG 4 cut(s) 726, 1265, 1308, 1530
Bst4CI ACNGT 9 cut(s) 20, 175, 866, 955, 1210, 1248, 1436, 1492, 1567
Bst6I CTCTTC 1 cut(s) 955
BstAFI CTTAAG 2 cut(s) 80, 200
BstBAI YACGTR 1 cut(s) 977
BstC8I GCNNGC 5 cut(s) 213, 311, 802, 1386, 1397
BstDEI CTNAG 8 cut(s) 66, 180, 314, 610, 620, 663, 901, 1035
BstF5I GGATG 5 cut(s) 571, 643, 1066, 1279, 1527
BstFNI CGCG 1 cut(s) 356
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 5 cut(s) 65, 196, 356, 1049, 1296
BstKTI GATC 7 cut(s) 444, 499, 553, 832, 1096, 1123, 1416
BstMAI GTCTC 2 cut(s) 616, 1519
BstMBI GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
BstMCI CGRYCG 1 cut(s) 231
BstMWI GCNNNNNNNGC 5 cut(s) 315, 947, 1053, 1551, 1614
BstNI CCWGG 4 cut(s) 726, 1265, 1308, 1530
BstNSI RCATGY 2 cut(s) 857, 1399
BstSCI CCNGG 5 cut(s) 73, 724, 1263, 1306, 1528
BstSFI CTRYAG 1 cut(s) 276
BstSLI GKGCMC 2 cut(s) 1152, 1443
BstUI CGCG 1 cut(s) 356
BstV1I GCAGC 3 cut(s) 262, 290, 1393
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 2 cut(s) 496, 1413
BstYI RGATCY 2 cut(s) 496, 1413
BsuRI GGCC 1 cut(s) 53
BtgZI GCGATG 1 cut(s) 615
BtsCI GGATG 5 cut(s) 571, 643, 1066, 1279, 1527
BtsI GCAGTG 2 cut(s) 265, 1624
BtsIMutI CAGTG 7 cut(s) 265, 617, 618, 1171, 1374, 1443, 1624
Cac8I GCNNGC 5 cut(s) 213, 311, 802, 1386, 1397
CciI TCATGA 1 cut(s) 571
CfoI GCGC 5 cut(s) 65, 196, 356, 1049, 1296
Cfr10I RCCGGY 1 cut(s) 1218
Cfr13I GGNCC 1 cut(s) 1261
Csp6I GTAC 7 cut(s) 112, 124, 522, 705, 1216, 1329, 1374
CspAI ACCGGT 1 cut(s) 1218
CviAII CATG 8 cut(s) 164, 542, 572, 717, 755, 854, 1213, 1396
CviQI GTAC 7 cut(s) 112, 124, 522, 705, 1216, 1329, 1374
DdeI CTNAG 8 cut(s) 66, 180, 314, 610, 620, 663, 901, 1035
DpnI GATC 7 cut(s) 443, 498, 552, 831, 1095, 1122, 1415
DpnII GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
DraIII CACNNNGTG 1 cut(s) 1438
EaeI YGGCCR 1 cut(s) 51
Eam1104I CTCTTC 1 cut(s) 955
EarI CTCTTC 1 cut(s) 955
Eco31I GGTCTC 1 cut(s) 1519
Eco47I GGWCC 1 cut(s) 1261
Eco47III AGCGCT 1 cut(s) 64
Eco57I CTGAAG 2 cut(s) 104, 232
Eco88I CYCGRG 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 1261
EcoRI GAATTC 1 cut(s) 592
EcoRII CCWGG 4 cut(s) 724, 1263, 1306, 1528
EcoT22I ATGCAT 1 cut(s) 547
FaeI CATG 8 cut(s) 167, 545, 575, 720, 758, 857, 1216, 1399
FalI AAGNNNNNCTT 2 cut(s) 987, 1019
FaqI GGGAC 3 cut(s) 1274, 1367, 1560
FatI CATG 8 cut(s) 163, 541, 571, 716, 754, 853, 1212, 1395
FbaI TGATCA 1 cut(s) 550
FblI GTMKAC 1 cut(s) 606
Fnu4HI GCNGC 3 cut(s) 276, 279, 1382
FokI GGATG 5 cut(s) 578, 650, 1073, 1286, 1534
Fsp4HI GCNGC 3 cut(s) 276, 279, 1382
FspBI CTAG 4 cut(s) 255, 297, 708, 947
GlaI GCGC 5 cut(s) 64, 195, 355, 1048, 1295
GluI GCNGC 3 cut(s) 276, 279, 1382
GsaI CCCAGC 1 cut(s) 1581
GsuI CTGGAG 1 cut(s) 1290
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 1 cut(s) 53
HapII CCGG 5 cut(s) 74, 144, 597, 1219, 1458
HhaI GCGC 5 cut(s) 65, 196, 356, 1049, 1296
Hin1II CATG 8 cut(s) 167, 545, 575, 720, 758, 857, 1216, 1399
Hin6I GCGC 5 cut(s) 63, 194, 354, 1047, 1294
HinP1I GCGC 5 cut(s) 63, 194, 354, 1047, 1294
HindIII AAGCTT 3 cut(s) 116, 244, 650
HinfI GANTC 3 cut(s) 766, 1181, 1478
HpaII CCGG 5 cut(s) 74, 144, 597, 1219, 1458
HphI GGTGA 5 cut(s) 128, 743, 1097, 1410, 1424
Hpy166II GTNNAC 3 cut(s) 607, 1441, 1470
Hpy188I TCNGA 3 cut(s) 1125, 1192, 1540
Hpy188III TCNNGA 5 cut(s) 94, 488, 554, 572, 1238
Hpy8I GTNNAC 3 cut(s) 607, 1441, 1470
Hpy99I CGWCG 4 cut(s) 46, 49, 52, 1235
HpyAV CCTTC 6 cut(s) 102, 124, 150, 1187, 1496, 1579
HpyCH4III ACNGT 9 cut(s) 20, 175, 866, 955, 1210, 1248, 1436, 1492, 1567
HpyCH4IV ACGT 4 cut(s) 188, 859, 976, 1376
HpyF10VI GCNNNNNNNGC 5 cut(s) 315, 947, 1053, 1551, 1614
HpyF3I CTNAG 8 cut(s) 66, 180, 314, 610, 620, 663, 901, 1035
HpySE526I ACGT 4 cut(s) 188, 859, 976, 1376
Hsp92II CATG 8 cut(s) 167, 545, 575, 720, 758, 857, 1216, 1399
HspAI GCGC 5 cut(s) 63, 194, 354, 1047, 1294
Ksp22I TGATCA 1 cut(s) 550
Kzo9I GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
LmnI GCTCC 5 cut(s) 306, 938, 1053, 1319, 1393
Lsp1109I GCAGC 3 cut(s) 262, 290, 1393
LweI GCATC 4 cut(s) 205, 448, 547, 1289
MaeI CTAG 4 cut(s) 255, 297, 708, 947
MaeII ACGT 4 cut(s) 188, 859, 976, 1376
MaeIII GTNAC 7 cut(s) 175, 184, 615, 860, 872, 1022, 1248
MalI GATC 7 cut(s) 443, 498, 552, 831, 1095, 1122, 1415
MboI GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
MboII GAAGA 8 cut(s) 140, 143, 231, 436, 457, 972, 1100, 1130
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 2 cut(s) 496, 1413
MhlI GDGCHC 5 cut(s) 664, 1036, 1058, 1152, 1443
MluCI AATT 8 cut(s) 397, 592, 629, 839, 879, 909, 1153, 1515
MmeI TCCRAC 4 cut(s) 304, 438, 622, 937
MnlI CCTC 7 cut(s) 97, 171, 320, 1076, 1138, 1314, 1461
Mph1103I ATGCAT 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 1482
MseI TTAA 5 cut(s) 81, 201, 912, 1512, 1571
MslI CAYNNNNRTG 1 cut(s) 759
MspA1I CMGCKG 1 cut(s) 275
MspCI CTTAAG 2 cut(s) 80, 200
MspI CCGG 5 cut(s) 74, 144, 597, 1219, 1458
MspR9I CCNGG 5 cut(s) 75, 726, 1265, 1308, 1530
MunI CAATTG 1 cut(s) 879
MvaI CCWGG 4 cut(s) 726, 1265, 1308, 1530
MvnI CGCG 1 cut(s) 356
MwoI GCNNNNNNNGC 5 cut(s) 315, 947, 1053, 1551, 1614
NciI CCSGG 1 cut(s) 75
NdeII GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
NlaIII CATG 8 cut(s) 167, 545, 575, 720, 758, 857, 1216, 1399
NlaIV GGNNCC 6 cut(s) 498, 723, 1228, 1262, 1287, 1315
NmeAIII GCCGAG 1 cut(s) 1523
NmuCI GTSAC 2 cut(s) 175, 615
NsiI ATGCAT 1 cut(s) 547
NspI RCATGY 2 cut(s) 857, 1399
PaeI GCATGC 1 cut(s) 1399
PagI TCATGA 1 cut(s) 571
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PdmI GAANNNNTTC 1 cut(s) 1482
PfeI GAWTC 3 cut(s) 766, 1181, 1478
PinAI ACCGGT 1 cut(s) 1218
PkrI GCNGC 3 cut(s) 277, 280, 1383
Ppu21I YACGTR 1 cut(s) 977
PpuMI RGGWCCY 1 cut(s) 1261
PshBI ATTAAT 1 cut(s) 912
PsiI TTATAA 2 cut(s) 672, 824
Psp1406I AACGTT 1 cut(s) 188
Psp5II RGGWCCY 1 cut(s) 1261
Psp6I CCWGG 4 cut(s) 724, 1263, 1306, 1528
PspFI CCCAGC 1 cut(s) 1577
PspGI CCWGG 4 cut(s) 724, 1263, 1306, 1528
PspN4I GGNNCC 6 cut(s) 498, 723, 1228, 1262, 1287, 1315
PspPI GGNCC 1 cut(s) 1261
PspPPI RGGWCCY 1 cut(s) 1261
PstI CTGCAG 1 cut(s) 280
PsuI RGATCY 2 cut(s) 496, 1413
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 7 cut(s) 113, 125, 523, 706, 1217, 1330, 1375
RsaNI GTAC 7 cut(s) 112, 124, 522, 705, 1216, 1329, 1374
RseI CAYNNNNRTG 1 cut(s) 759
SaqAI TTAA 5 cut(s) 81, 201, 912, 1512, 1571
SatI GCNGC 3 cut(s) 276, 279, 1382
Sau3AI GATC 7 cut(s) 441, 496, 550, 829, 1093, 1120, 1413
Sau96I GGNCC 1 cut(s) 1261
ScaI AGTACT 2 cut(s) 523, 1330
ScrFI CCNGG 5 cut(s) 75, 726, 1265, 1308, 1530
SduI GDGCHC 5 cut(s) 664, 1036, 1058, 1152, 1443
SfaNI GCATC 4 cut(s) 205, 448, 547, 1289
SfcI CTRYAG 1 cut(s) 276
SinI GGWCC 1 cut(s) 1261
SmiMI CAYNNNNRTG 1 cut(s) 759
SmlI CTYRAG 3 cut(s) 80, 200, 486
SmoI CTYRAG 3 cut(s) 80, 200, 486
SpeI ACTAGT 1 cut(s) 707
SphI GCATGC 1 cut(s) 1399
Sse9I AATT 8 cut(s) 397, 592, 629, 839, 879, 909, 1153, 1515
SsiI CCGC 4 cut(s) 12, 231, 268, 1421
SspI AATATT 1 cut(s) 1510
SspMI CTAG 4 cut(s) 255, 297, 708, 947
StyD4I CCNGG 5 cut(s) 73, 724, 1263, 1306, 1528
TaaI ACNGT 9 cut(s) 20, 175, 866, 955, 1210, 1248, 1436, 1492, 1567
TaiI ACGT 4 cut(s) 191, 862, 979, 1379
TaqII GACCGA 1 cut(s) 1223
TasI AATT 8 cut(s) 397, 592, 629, 839, 879, 909, 1153, 1515
TatI WGTACW 3 cut(s) 521, 704, 1328
TfiI GAWTC 3 cut(s) 766, 1181, 1478
Tru1I TTAA 5 cut(s) 81, 201, 912, 1512, 1571
Tru9I TTAA 5 cut(s) 81, 201, 912, 1512, 1571
TscAI CASTG 7 cut(s) 265, 618, 624, 1171, 1374, 1450, 1624
TseFI GTSAC 2 cut(s) 175, 615
TseI GCWGC 3 cut(s) 275, 278, 1381
Tsp45I GTSAC 2 cut(s) 175, 615
TspDTI ATGAA 3 cut(s) 457, 795, 1173
TspGWI ACGGA 2 cut(s) 1073, 1219
TspRI CASTG 7 cut(s) 265, 618, 624, 1171, 1374, 1450, 1624
Vha464I CTTAAG 2 cut(s) 80, 200
VneI GTGCAC 1 cut(s) 1439
VpaK11BI GGWCC 1 cut(s) 1261
VspI ATTAAT 1 cut(s) 912
XapI RAATTY 2 cut(s) 592, 1515
XceI RCATGY 2 cut(s) 857, 1399
XcmI CCANNNNNNNNNTGG 2 cut(s) 885, 1553
XmiI GTMKAC 1 cut(s) 606
XmnI GAANNNNTTC 1 cut(s) 1482
XspI CTAG 4 cut(s) 255, 297, 708, 947
ZrmI AGTACT 2 cut(s) 523, 1330
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.