NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52380 AT1G52380 AT1G52380 AT1G52380 AT3G15970 AT3G15970 |
| fragaria_vesca | FvH4_6g31000 |
| malus_domestica | MD09G1214400.v1.1 MD17G1196800.v1.1 |
| prunus_persica | Prupe.3G072500_v2.0.a1 |
| pyrus_communis | pycom09g13120 pycom09g13130 pycom17g20180 pycom17g20190 |
| rosa_chinensis | RchiOBHm_Chr2g0137631 |
| rosa_laevigata | RLG00000019665 |
| rosa_multiflora | Rmu_sc0000765.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00106980 |
| rosa_rugosa | Rorug02G0343600 Rorug02G0343700 |
| rosa_samantha | Rh2AG391400 Rh2BG399000 Rh2CG378400 Rh2DG414000 |
| rosa_wichuraiana | Rw2G032060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 292 |
| AccB1I | GGYRCC | 1 cut(s) | 635 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 491 |
| AciI | CCGC | 4 cut(s) | 5, 270, 935, 953 |
| AclWI | GGATC | 1 cut(s) | 1011 |
| AcsI | RAATTY | 3 cut(s) | 300, 965, 1229 |
| AcuI | CTGAAG | 5 cut(s) | 174, 261, 441, 651, 1028 |
| AfaI | GTAC | 1 cut(s) | 763 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 215, 491, 855 |
| AgsI | TTSAA | 8 cut(s) | 124, 646, 864, 891, 965, 1087, 1201, 1207 |
| AhlI | ACTAGT | 1 cut(s) | 1048 |
| AjnI | CCWGG | 3 cut(s) | 73, 397, 872 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 474, 506 |
| AluBI | AGCT | 8 cut(s) | 194, 245, 314, 425, 488, 661, 1114, 1268 |
| AluI | AGCT | 8 cut(s) | 194, 245, 314, 425, 488, 661, 1114, 1268 |
| Alw21I | GWGCWC | 1 cut(s) | 1254 |
| Alw26I | GTCTC | 4 cut(s) | 66, 551, 815, 905 |
| AlwI | GGATC | 1 cut(s) | 1011 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 398 |
| AoxI | GGCC | 2 cut(s) | 129, 857 |
| ApeKI | GCWGC | 3 cut(s) | 44, 434, 658 |
| ApoI | RAATTY | 3 cut(s) | 300, 965, 1229 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 734, 766 |
| AspLEI | GCGC | 1 cut(s) | 225 |
| AspS9I | GGNCC | 3 cut(s) | 129, 857, 1215 |
| AsuHPI | GGTGA | 3 cut(s) | 566, 581, 890 |
| AsuII | TTCGAA | 1 cut(s) | 740 |
| AsuNHI | GCTAGC | 1 cut(s) | 145 |
| AvaII | GGWCC | 1 cut(s) | 1215 |
| BanI | GGYRCC | 1 cut(s) | 635 |
| BauI | CACGAG | 1 cut(s) | 63 |
| BbsI | GAAGAC | 2 cut(s) | 375, 1286 |
| Bbv12I | GWGCWC | 1 cut(s) | 1254 |
| BbvI | GCAGC | 3 cut(s) | 31, 421, 670 |
| BccI | CCATC | 6 cut(s) | 34, 302, 545, 740, 1172, 1205 |
| BciT130I | CCWGG | 3 cut(s) | 75, 399, 874 |
| BclI | TGATCA | 1 cut(s) | 412 |
| BcoDI | GTCTC | 4 cut(s) | 66, 551, 815, 905 |
| BcuI | ACTAGT | 1 cut(s) | 1048 |
| BfaI | CTAG | 6 cut(s) | 107, 146, 246, 288, 305, 1049 |
| BfmI | CTRYAG | 2 cut(s) | 45, 435 |
| BfuAI | ACCTGC | 1 cut(s) | 292 |
| BisI | GCNGC | 4 cut(s) | 45, 270, 435, 659 |
| BlsI | GCNGC | 4 cut(s) | 46, 271, 436, 660 |
| BmcAI | AGTACT | 1 cut(s) | 763 |
| Bme1390I | CCNGG | 3 cut(s) | 75, 399, 874 |
| Bme18I | GGWCC | 1 cut(s) | 1215 |
| BmgT120I | GGNCC | 3 cut(s) | 129, 857, 1215 |
| BmiI | GGNNCC | 5 cut(s) | 231, 483, 621, 637, 1216 |
| BmrFI | CCNGG | 3 cut(s) | 75, 399, 874 |
| BmrI | ACTGGG | 2 cut(s) | 375, 711 |
| BmsI | GCATC | 4 cut(s) | 210, 265, 283, 940 |
| BmtI | GCTAGC | 1 cut(s) | 149 |
| BmuI | ACTGGG | 2 cut(s) | 375, 711 |
| BpiI | GAAGAC | 2 cut(s) | 375, 1286 |
| BpmI | CTGGAG | 2 cut(s) | 360, 936 |
| Bpu14I | TTCGAA | 1 cut(s) | 740 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| BsaI | GGTCTC | 1 cut(s) | 815 |
| BsaJI | CCNNGG | 2 cut(s) | 872, 873 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 178, 208 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 215, 491, 855 |
| Bse1I | ACTGG | 6 cut(s) | 132, 381, 565, 706, 769, 919 |
| BseBI | CCWGG | 3 cut(s) | 75, 399, 874 |
| BseDI | CCNNGG | 2 cut(s) | 872, 873 |
| BseGI | GGATG | 6 cut(s) | 100, 225, 751, 882, 1183, 1216 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 215, 491, 855 |
| BseNI | ACTGG | 6 cut(s) | 132, 381, 565, 706, 769, 919 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| BseXI | GCAGC | 3 cut(s) | 31, 421, 670 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| BsgI | GTGCAG | 1 cut(s) | 270 |
| BshFI | GGCC | 2 cut(s) | 131, 859 |
| BshNI | GGYRCC | 1 cut(s) | 635 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1254 |
| BsiSI | CCGG | 1 cut(s) | 182 |
| BslFI | GGGAC | 1 cut(s) | 854 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 215, 491, 855 |
| BsmAI | GTCTC | 4 cut(s) | 66, 551, 815, 905 |
| BsmFI | GGGAC | 1 cut(s) | 854 |
| BsmI | GAATGC | 1 cut(s) | 1093 |
| BsnI | GGCC | 2 cut(s) | 131, 859 |
| Bso31I | GGTCTC | 1 cut(s) | 815 |
| Bsp119I | TTCGAA | 1 cut(s) | 740 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1254 |
| Bsp143I | GATC | 2 cut(s) | 412, 1003 |
| BspACI | CCGC | 4 cut(s) | 5, 270, 935, 953 |
| BspANI | GGCC | 2 cut(s) | 131, 859 |
| BspLI | GGNNCC | 5 cut(s) | 231, 483, 621, 637, 1216 |
| BspMAI | CTGCAG | 2 cut(s) | 49, 439 |
| BspMI | ACCTGC | 1 cut(s) | 292 |
| BspOI | GCTAGC | 1 cut(s) | 149 |
| BspPI | GGATC | 1 cut(s) | 1011 |
| BspT104I | TTCGAA | 1 cut(s) | 740 |
| BspT107I | GGYRCC | 1 cut(s) | 635 |
| BspTNI | GGTCTC | 1 cut(s) | 815 |
| BsrI | ACTGG | 6 cut(s) | 132, 381, 565, 706, 769, 919 |
| BssECI | CCNNGG | 2 cut(s) | 872, 873 |
| BssMI | GATC | 2 cut(s) | 412, 1003 |
| BssSI | CACGAG | 1 cut(s) | 63 |
| Bst2BI | CACGAG | 1 cut(s) | 63 |
| Bst2UI | CCWGG | 3 cut(s) | 75, 399, 874 |
| Bst4CI | ACNGT | 5 cut(s) | 60, 518, 544, 616, 1273 |
| Bst6I | CTCTTC | 3 cut(s) | 582, 587, 808 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 284 |
| BstBI | TTCGAA | 1 cut(s) | 740 |
| BstC8I | GCNNGC | 3 cut(s) | 147, 1116, 1150 |
| BstDEI | CTNAG | 1 cut(s) | 33 |
| BstF5I | GGATG | 6 cut(s) | 100, 225, 751, 882, 1183, 1216 |
| BstHHI | GCGC | 1 cut(s) | 225 |
| BstKTI | GATC | 2 cut(s) | 415, 1006 |
| BstMAI | GTCTC | 4 cut(s) | 66, 551, 815, 905 |
| BstMBI | GATC | 2 cut(s) | 412, 1003 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 191, 275, 284, 293, 431, 635, 1040 |
| BstNI | CCWGG | 3 cut(s) | 75, 399, 874 |
| BstSCI | CCNGG | 3 cut(s) | 73, 397, 872 |
| BstSFI | CTRYAG | 2 cut(s) | 45, 435 |
| BstV1I | GCAGC | 3 cut(s) | 31, 421, 670 |
| BstV2I | GAAGAC | 2 cut(s) | 375, 1286 |
| BstX2I | RGATCY | 1 cut(s) | 1003 |
| BstYI | RGATCY | 1 cut(s) | 1003 |
| BsuRI | GGCC | 2 cut(s) | 131, 859 |
| BtsCI | GGATG | 6 cut(s) | 100, 225, 751, 882, 1183, 1216 |
| BtsI | GCAGTG | 1 cut(s) | 942 |
| BtsIMutI | CAGTG | 3 cut(s) | 139, 388, 942 |
| BveI | ACCTGC | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 3 cut(s) | 147, 1116, 1150 |
| CaiI | CAGNNNCTG | 1 cut(s) | 398 |
| CfoI | GCGC | 1 cut(s) | 225 |
| Cfr13I | GGNCC | 3 cut(s) | 129, 857, 1215 |
| Csp6I | GTAC | 1 cut(s) | 762 |
| CviAII | CATG | 3 cut(s) | 410, 1108, 1153 |
| CviQI | GTAC | 1 cut(s) | 762 |
| DdeI | CTNAG | 1 cut(s) | 33 |
| DpnI | GATC | 2 cut(s) | 414, 1005 |
| DpnII | GATC | 2 cut(s) | 412, 1003 |
| Eam1104I | CTCTTC | 3 cut(s) | 582, 587, 808 |
| EarI | CTCTTC | 3 cut(s) | 582, 587, 808 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco31I | GGTCTC | 1 cut(s) | 815 |
| Eco47I | GGWCC | 1 cut(s) | 1215 |
| Eco57I | CTGAAG | 5 cut(s) | 174, 261, 441, 651, 1028 |
| EcoO109I | RGGNCCY | 1 cut(s) | 857 |
| EcoRI | GAATTC | 1 cut(s) | 300 |
| EcoRII | CCWGG | 3 cut(s) | 73, 397, 872 |
| FaeI | CATG | 3 cut(s) | 413, 1111, 1156 |
| FaiI | YATR | 9 cut(s) | 411, 417, 473, 1055, 1109, 1124, 1154, 1220, 1277 |
| FaqI | GGGAC | 1 cut(s) | 854 |
| FatI | CATG | 3 cut(s) | 409, 1107, 1152 |
| FbaI | TGATCA | 1 cut(s) | 412 |
| Fnu4HI | GCNGC | 4 cut(s) | 45, 270, 435, 659 |
| FokI | GGATG | 6 cut(s) | 107, 232, 758, 869, 1190, 1223 |
| Fsp4HI | GCNGC | 4 cut(s) | 45, 270, 435, 659 |
| FspBI | CTAG | 6 cut(s) | 107, 146, 246, 288, 305, 1049 |
| GlaI | GCGC | 1 cut(s) | 224 |
| GluI | GCNGC | 4 cut(s) | 45, 270, 435, 659 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| GsuI | CTGGAG | 2 cut(s) | 360, 936 |
| HaeIII | GGCC | 2 cut(s) | 131, 859 |
| HapII | CCGG | 1 cut(s) | 182 |
| HhaI | GCGC | 1 cut(s) | 225 |
| Hin1II | CATG | 3 cut(s) | 413, 1111, 1156 |
| Hin6I | GCGC | 1 cut(s) | 223 |
| HinP1I | GCGC | 1 cut(s) | 223 |
| HinfI | GANTC | 5 cut(s) | 8, 98, 428, 1025, 1282 |
| HpaII | CCGG | 1 cut(s) | 182 |
| HphI | GGTGA | 3 cut(s) | 566, 581, 890 |
| Hpy166II | GTNNAC | 2 cut(s) | 529, 776 |
| Hpy188I | TCNGA | 5 cut(s) | 13, 103, 241, 1008, 1024 |
| Hpy188III | TCNNGA | 7 cut(s) | 65, 80, 124, 305, 320, 696, 1286 |
| Hpy8I | GTNNAC | 2 cut(s) | 529, 776 |
| Hpy99I | CGWCG | 2 cut(s) | 177, 977 |
| HpyCH4III | ACNGT | 5 cut(s) | 60, 518, 544, 616, 1273 |
| HpyCH4IV | ACGT | 2 cut(s) | 40, 1142 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 191, 275, 284, 293, 431, 635, 1040 |
| HpyF3I | CTNAG | 1 cut(s) | 33 |
| HpySE526I | ACGT | 2 cut(s) | 40, 1142 |
| Hsp92II | CATG | 3 cut(s) | 413, 1111, 1156 |
| HspAI | GCGC | 1 cut(s) | 223 |
| Ksp22I | TGATCA | 1 cut(s) | 412 |
| Kzo9I | GATC | 2 cut(s) | 412, 1003 |
| LmnI | GCTCC | 2 cut(s) | 199, 311 |
| Lsp1109I | GCAGC | 3 cut(s) | 31, 421, 670 |
| LweI | GCATC | 4 cut(s) | 210, 265, 283, 940 |
| MaeI | CTAG | 6 cut(s) | 107, 146, 246, 288, 305, 1049 |
| MaeII | ACGT | 2 cut(s) | 40, 1142 |
| MaeIII | GTNAC | 3 cut(s) | 878, 1138, 1243 |
| MalI | GATC | 2 cut(s) | 414, 1005 |
| MboI | GATC | 2 cut(s) | 412, 1003 |
| MfeI | CAATTG | 1 cut(s) | 864 |
| MflI | RGATCY | 1 cut(s) | 1003 |
| MhlI | GDGCHC | 1 cut(s) | 1254 |
| MluCI | AATT | 7 cut(s) | 300, 546, 864, 965, 1068, 1080, 1229 |
| MlyI | GAGTC | 1 cut(s) | 1276 |
| MmeI | TCCRAC | 2 cut(s) | 228, 472 |
| MseI | TTAA | 1 cut(s) | 165 |
| MspA1I | CMGCKG | 2 cut(s) | 272, 488 |
| MspI | CCGG | 1 cut(s) | 182 |
| MspR9I | CCNGG | 3 cut(s) | 75, 399, 874 |
| MunI | CAATTG | 1 cut(s) | 864 |
| Mva1269I | GAATGC | 1 cut(s) | 1093 |
| MvaI | CCWGG | 3 cut(s) | 75, 399, 874 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 191, 275, 284, 293, 431, 635, 1040 |
| NdeII | GATC | 2 cut(s) | 412, 1003 |
| NheI | GCTAGC | 1 cut(s) | 145 |
| NlaIII | CATG | 3 cut(s) | 413, 1111, 1156 |
| NlaIV | GGNNCC | 5 cut(s) | 231, 483, 621, 637, 1216 |
| NmuCI | GTSAC | 1 cut(s) | 878 |
| NspV | TTCGAA | 1 cut(s) | 740 |
| PasI | CCCWGGG | 1 cut(s) | 873 |
| PctI | GAATGC | 1 cut(s) | 1093 |
| PfeI | GAWTC | 4 cut(s) | 8, 98, 428, 1025 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 491 |
| PkrI | GCNGC | 4 cut(s) | 46, 271, 436, 660 |
| PleI | GAGTC | 1 cut(s) | 1276 |
| PpsI | GAGTC | 1 cut(s) | 1276 |
| Psp6I | CCWGG | 3 cut(s) | 73, 397, 872 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PspGI | CCWGG | 3 cut(s) | 73, 397, 872 |
| PspN4I | GGNNCC | 5 cut(s) | 231, 483, 621, 637, 1216 |
| PspPI | GGNCC | 3 cut(s) | 129, 857, 1215 |
| PstI | CTGCAG | 2 cut(s) | 49, 439 |
| PstNI | CAGNNNCTG | 1 cut(s) | 398 |
| PsuI | RGATCY | 1 cut(s) | 1003 |
| PvuII | CAGCTG | 1 cut(s) | 488 |
| RsaI | GTAC | 1 cut(s) | 763 |
| RsaNI | GTAC | 1 cut(s) | 762 |
| SaqAI | TTAA | 1 cut(s) | 165 |
| SatI | GCNGC | 4 cut(s) | 45, 270, 435, 659 |
| Sau3AI | GATC | 2 cut(s) | 412, 1003 |
| Sau96I | GGNCC | 3 cut(s) | 129, 857, 1215 |
| ScaI | AGTACT | 1 cut(s) | 763 |
| SchI | GAGTC | 1 cut(s) | 1276 |
| ScrFI | CCNGG | 3 cut(s) | 75, 399, 874 |
| SduI | GDGCHC | 1 cut(s) | 1254 |
| SfaNI | GCATC | 4 cut(s) | 210, 265, 283, 940 |
| SfcI | CTRYAG | 2 cut(s) | 45, 435 |
| SfuI | TTCGAA | 1 cut(s) | 740 |
| SinI | GGWCC | 1 cut(s) | 1215 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| SpeI | ACTAGT | 1 cut(s) | 1048 |
| Sse9I | AATT | 7 cut(s) | 300, 546, 864, 965, 1068, 1080, 1229 |
| SsiI | CCGC | 4 cut(s) | 5, 270, 935, 953 |
| SspMI | CTAG | 6 cut(s) | 107, 146, 246, 288, 305, 1049 |
| StyD4I | CCNGG | 3 cut(s) | 73, 397, 872 |
| TaaI | ACNGT | 5 cut(s) | 60, 518, 544, 616, 1273 |
| TaiI | ACGT | 2 cut(s) | 43, 1145 |
| TaqI | TCGA | 3 cut(s) | 665, 740, 972 |
| TaqII | GACCGA | 1 cut(s) | 803 |
| TasI | AATT | 7 cut(s) | 300, 546, 864, 965, 1068, 1080, 1229 |
| TatI | WGTACW | 1 cut(s) | 761 |
| TauI | GCSGC | 1 cut(s) | 272 |
| TfiI | GAWTC | 4 cut(s) | 8, 98, 428, 1025 |
| Tru1I | TTAA | 1 cut(s) | 165 |
| Tru9I | TTAA | 1 cut(s) | 165 |
| TscAI | CASTG | 3 cut(s) | 139, 388, 949 |
| TseFI | GTSAC | 1 cut(s) | 878 |
| TseI | GCWGC | 3 cut(s) | 44, 434, 658 |
| Tsp45I | GTSAC | 1 cut(s) | 878 |
| TspDTI | ATGAA | 7 cut(s) | 600, 624, 825, 1124, 1169, 1182, 1292 |
| TspGWI | ACGGA | 1 cut(s) | 990 |
| TspRI | CASTG | 3 cut(s) | 139, 388, 949 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 491 |
| VpaK11BI | GGWCC | 1 cut(s) | 1215 |
| XapI | RAATTY | 3 cut(s) | 300, 965, 1229 |
| XbaI | TCTAGA | 1 cut(s) | 304 |
| XspI | CTAG | 6 cut(s) | 107, 146, 246, 288, 305, 1049 |
| ZrmI | AGTACT | 1 cut(s) | 763 |