NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52380 AT1G52380 AT1G52380 AT1G52380 AT3G15970 AT3G15970 |
| fragaria_vesca | FvH4_6g31000 |
| malus_domestica | MD09G1214400.v1.1 MD17G1196800.v1.1 |
| prunus_persica | Prupe.3G072500_v2.0.a1 |
| pyrus_communis | pycom09g13120 pycom09g13130 pycom17g20180 pycom17g20190 |
| rosa_chinensis | RchiOBHm_Chr2g0137631 |
| rosa_laevigata | RLG00000019665 |
| rosa_multiflora | Rmu_sc0000765.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00106980 |
| rosa_rugosa | Rorug02G0343600 Rorug02G0343700 |
| rosa_samantha | Rh2AG391400 Rh2BG399000 Rh2CG378400 Rh2DG414000 |
| rosa_wichuraiana | Rw2G032060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 292, 334 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 191 |
| AccI | GTMKAC | 1 cut(s) | 220 |
| AccIII | TCCGGA | 1 cut(s) | 544 |
| AciI | CCGC | 4 cut(s) | 5, 175, 830, 860 |
| AclWI | GGATC | 2 cut(s) | 530, 709 |
| AcsI | RAATTY | 6 cut(s) | 748, 758, 890, 1127, 1154, 1222 |
| AcuI | CTGAAG | 2 cut(s) | 282, 417 |
| AfaI | GTAC | 6 cut(s) | 432, 553, 679, 766, 786, 1025 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 191, 215, 242, 446 |
| AgsI | TTSAA | 9 cut(s) | 104, 124, 405, 657, 756, 868, 890, 1126, 1132 |
| AjnI | CCWGG | 1 cut(s) | 73 |
| AluBI | AGCT | 7 cut(s) | 44, 272, 362, 443, 564, 577, 1039 |
| AluI | AGCT | 7 cut(s) | 44, 272, 362, 443, 564, 577, 1039 |
| Alw21I | GWGCWC | 1 cut(s) | 566 |
| Alw26I | GTCTC | 6 cut(s) | 104, 467, 737, 830, 964, 976 |
| AlwI | GGATC | 2 cut(s) | 530, 709 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 191, 257, 275, 365 |
| Ama87I | CYCGRG | 1 cut(s) | 63 |
| Aor13HI | TCCGGA | 1 cut(s) | 544 |
| AoxI | GGCC | 2 cut(s) | 76, 129 |
| ApeKI | GCWGC | 6 cut(s) | 44, 181, 272, 275, 362, 878 |
| ApoI | RAATTY | 6 cut(s) | 748, 758, 890, 1127, 1154, 1222 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 751 |
| AspLEI | GCGC | 1 cut(s) | 251 |
| AspS9I | GGNCC | 2 cut(s) | 129, 194 |
| AsuHPI | GGTGA | 1 cut(s) | 482 |
| AvaI | CYCGRG | 1 cut(s) | 63 |
| AvaII | GGWCC | 1 cut(s) | 194 |
| AxyI | CCTNAGG | 1 cut(s) | 423 |
| BanII | GRGCYC | 2 cut(s) | 566, 778 |
| BbsI | GAAGAC | 2 cut(s) | 497, 1217 |
| Bbv12I | GWGCWC | 1 cut(s) | 566 |
| BbvI | GCAGC | 6 cut(s) | 31, 193, 259, 262, 349, 865 |
| BccI | CCATC | 5 cut(s) | 656, 791, 893, 1097, 1130 |
| BceAI | ACGGC | 1 cut(s) | 1218 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 77, 111 |
| BciT130I | CCWGG | 1 cut(s) | 75 |
| BclI | TGATCA | 1 cut(s) | 712 |
| BcoDI | GTCTC | 6 cut(s) | 104, 467, 737, 830, 964, 976 |
| BfaI | CTAG | 1 cut(s) | 1017 |
| BfmI | CTRYAG | 1 cut(s) | 1143 |
| BfuAI | ACCTGC | 2 cut(s) | 292, 334 |
| BglII | AGATCT | 1 cut(s) | 928 |
| BisI | GCNGC | 7 cut(s) | 45, 175, 182, 273, 276, 363, 879 |
| BlsI | GCNGC | 7 cut(s) | 46, 176, 183, 274, 277, 364, 880 |
| Bme1390I | CCNGG | 1 cut(s) | 75 |
| Bme18I | GGWCC | 1 cut(s) | 194 |
| BmeT110I | CYCGRG | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 2 cut(s) | 129, 194 |
| BmiI | GGNNCC | 4 cut(s) | 231, 420, 667, 777 |
| BmrFI | CCNGG | 1 cut(s) | 75 |
| BmrI | ACTGGG | 1 cut(s) | 627 |
| BmsI | GCATC | 4 cut(s) | 85, 197, 865, 1205 |
| BmuI | ACTGGG | 1 cut(s) | 627 |
| BpiI | GAAGAC | 2 cut(s) | 497, 1217 |
| BpmI | CTGGAG | 2 cut(s) | 762, 861 |
| BpuEI | CTTGAG | 1 cut(s) | 971 |
| Bsa29I | ATCGAT | 1 cut(s) | 1089 |
| BsaI | GGTCTC | 1 cut(s) | 737 |
| BsaJI | CCNNGG | 2 cut(s) | 73, 1230 |
| BsaWI | WCCGGW | 1 cut(s) | 544 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 191, 215, 242, 446 |
| Bse1I | ACTGG | 7 cut(s) | 118, 132, 288, 622, 685, 779, 844 |
| Bse21I | CCTNAGG | 1 cut(s) | 423 |
| BseAI | TCCGGA | 1 cut(s) | 544 |
| BseBI | CCWGG | 1 cut(s) | 75 |
| BseCI | ATCGAT | 1 cut(s) | 1089 |
| BseDI | CCNNGG | 2 cut(s) | 73, 1230 |
| BseGI | GGATG | 3 cut(s) | 667, 1108, 1141 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 191, 215, 242, 446 |
| BseMII | CTCAG | 1 cut(s) | 414 |
| BseNI | ACTGG | 7 cut(s) | 118, 132, 288, 622, 685, 779, 844 |
| BseRI | GAGGAG | 3 cut(s) | 152, 326, 500 |
| BseXI | GCAGC | 6 cut(s) | 31, 193, 259, 262, 349, 865 |
| BsgI | GTGCAG | 1 cut(s) | 261 |
| BshFI | GGCC | 2 cut(s) | 78, 131 |
| BshVI | ATCGAT | 1 cut(s) | 1089 |
| BsiHKAI | GWGCWC | 1 cut(s) | 566 |
| BsiHKCI | CYCGRG | 1 cut(s) | 63 |
| BsiSI | CCGG | 1 cut(s) | 545 |
| BslFI | GGGAC | 2 cut(s) | 239, 970 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 191, 215, 242, 446 |
| BsmAI | GTCTC | 6 cut(s) | 104, 467, 737, 830, 964, 976 |
| BsmFI | GGGAC | 2 cut(s) | 239, 970 |
| BsmI | GAATGC | 1 cut(s) | 1018 |
| BsnI | GGCC | 2 cut(s) | 78, 131 |
| Bso31I | GGTCTC | 1 cut(s) | 737 |
| BsoBI | CYCGRG | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 2 cut(s) | 566, 778 |
| Bsp13I | TCCGGA | 1 cut(s) | 544 |
| Bsp1407I | TGTACA | 1 cut(s) | 430 |
| Bsp143I | GATC | 4 cut(s) | 535, 701, 712, 928 |
| BspACI | CCGC | 4 cut(s) | 5, 175, 830, 860 |
| BspANI | GGCC | 2 cut(s) | 78, 131 |
| BspCNI | CTCAG | 1 cut(s) | 415 |
| BspDI | ATCGAT | 1 cut(s) | 1089 |
| BspEI | TCCGGA | 1 cut(s) | 544 |
| BspLI | GGNNCC | 4 cut(s) | 231, 420, 667, 777 |
| BspMI | ACCTGC | 2 cut(s) | 292, 334 |
| BspPI | GGATC | 2 cut(s) | 530, 709 |
| BspTNI | GGTCTC | 1 cut(s) | 737 |
| BsrGI | TGTACA | 1 cut(s) | 430 |
| BsrI | ACTGG | 7 cut(s) | 118, 132, 288, 622, 685, 779, 844 |
| BssECI | CCNNGG | 2 cut(s) | 73, 1230 |
| BssMI | GATC | 4 cut(s) | 535, 701, 712, 928 |
| BssNAI | GTATAC | 1 cut(s) | 221 |
| BssT1I | CCWWGG | 1 cut(s) | 1230 |
| Bst1107I | GTATAC | 1 cut(s) | 221 |
| Bst2UI | CCWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 2 cut(s) | 225, 1085 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 257, 284 |
| BstAUI | TGTACA | 1 cut(s) | 430 |
| BstC8I | GCNNGC | 5 cut(s) | 42, 147, 179, 186, 1075 |
| BstDEI | CTNAG | 3 cut(s) | 33, 423, 789 |
| BstF5I | GGATG | 3 cut(s) | 667, 1108, 1141 |
| BstHHI | GCGC | 1 cut(s) | 251 |
| BstKTI | GATC | 4 cut(s) | 538, 704, 715, 931 |
| BstMAI | GTCTC | 6 cut(s) | 104, 467, 737, 830, 964, 976 |
| BstMBI | GATC | 4 cut(s) | 535, 701, 712, 928 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 257, 284, 359, 878, 1172, 1202 |
| BstNI | CCWGG | 1 cut(s) | 75 |
| BstSCI | CCNGG | 1 cut(s) | 73 |
| BstSFI | CTRYAG | 1 cut(s) | 1143 |
| BstV1I | GCAGC | 6 cut(s) | 31, 193, 259, 262, 349, 865 |
| BstV2I | GAAGAC | 2 cut(s) | 497, 1217 |
| BstX2I | RGATCY | 2 cut(s) | 535, 928 |
| BstYI | RGATCY | 2 cut(s) | 535, 928 |
| BstZ17I | GTATAC | 1 cut(s) | 221 |
| Bsu15I | ATCGAT | 1 cut(s) | 1089 |
| Bsu36I | CCTNAGG | 1 cut(s) | 423 |
| BsuRI | GGCC | 2 cut(s) | 78, 131 |
| BsuTUI | ATCGAT | 1 cut(s) | 1089 |
| BtsCI | GGATG | 3 cut(s) | 667, 1108, 1141 |
| BtsI | GCAGTG | 1 cut(s) | 1161 |
| BtsIMutI | CAGTG | 4 cut(s) | 139, 295, 393, 1161 |
| BveI | ACCTGC | 2 cut(s) | 292, 334 |
| Cac8I | GCNNGC | 5 cut(s) | 42, 147, 179, 186, 1075 |
| CaiI | CAGNNNCTG | 4 cut(s) | 191, 257, 275, 365 |
| CfoI | GCGC | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 2 cut(s) | 129, 194 |
| ClaI | ATCGAT | 1 cut(s) | 1089 |
| Csp6I | GTAC | 6 cut(s) | 431, 552, 678, 765, 785, 1024 |
| CviAII | CATG | 3 cut(s) | 434, 1033, 1078 |
| CviQI | GTAC | 6 cut(s) | 431, 552, 678, 765, 785, 1024 |
| DdeI | CTNAG | 3 cut(s) | 33, 423, 789 |
| DpnI | GATC | 4 cut(s) | 537, 703, 714, 930 |
| DpnII | GATC | 4 cut(s) | 535, 701, 712, 928 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 564 |
| Eco130I | CCWWGG | 1 cut(s) | 1230 |
| Eco147I | AGGCCT | 1 cut(s) | 78 |
| Eco24I | GRGCYC | 2 cut(s) | 566, 778 |
| Eco31I | GGTCTC | 1 cut(s) | 737 |
| Eco47I | GGWCC | 1 cut(s) | 194 |
| Eco53kI | GAGCTC | 1 cut(s) | 564 |
| Eco57I | CTGAAG | 2 cut(s) | 282, 417 |
| Eco81I | CCTNAGG | 1 cut(s) | 423 |
| Eco88I | CYCGRG | 1 cut(s) | 63 |
| EcoICRI | GAGCTC | 1 cut(s) | 564 |
| EcoRII | CCWGG | 1 cut(s) | 73 |
| EcoT14I | CCWWGG | 1 cut(s) | 1230 |
| EcoT38I | GRGCYC | 2 cut(s) | 566, 778 |
| ErhI | CCWWGG | 1 cut(s) | 1230 |
| FaeI | CATG | 3 cut(s) | 437, 1036, 1081 |
| FaiI | YATR | 9 cut(s) | 221, 435, 980, 1034, 1049, 1079, 1145, 1179, 1208 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 84, 116 |
| FaqI | GGGAC | 2 cut(s) | 239, 970 |
| FatI | CATG | 3 cut(s) | 433, 1032, 1077 |
| FbaI | TGATCA | 1 cut(s) | 712 |
| FblI | GTMKAC | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 7 cut(s) | 45, 175, 182, 273, 276, 363, 879 |
| FokI | GGATG | 3 cut(s) | 674, 1115, 1148 |
| FriOI | GRGCYC | 2 cut(s) | 566, 778 |
| Fsp4HI | GCNGC | 7 cut(s) | 45, 175, 182, 273, 276, 363, 879 |
| FspBI | CTAG | 1 cut(s) | 1017 |
| GlaI | GCGC | 1 cut(s) | 250 |
| GluI | GCNGC | 7 cut(s) | 45, 175, 182, 273, 276, 363, 879 |
| GsuI | CTGGAG | 2 cut(s) | 762, 861 |
| HaeIII | GGCC | 2 cut(s) | 78, 131 |
| HapII | CCGG | 1 cut(s) | 545 |
| HhaI | GCGC | 1 cut(s) | 251 |
| Hin1II | CATG | 3 cut(s) | 437, 1036, 1081 |
| Hin6I | GCGC | 1 cut(s) | 249 |
| HinP1I | GCGC | 1 cut(s) | 249 |
| HinfI | GANTC | 5 cut(s) | 8, 356, 950, 984, 1213 |
| HpaII | CCGG | 1 cut(s) | 545 |
| HphI | GGTGA | 1 cut(s) | 482 |
| Hpy166II | GTNNAC | 1 cut(s) | 221 |
| Hpy188I | TCNGA | 7 cut(s) | 13, 307, 328, 933, 949, 1011, 1240 |
| Hpy188III | TCNNGA | 7 cut(s) | 65, 101, 124, 545, 612, 736, 1217 |
| Hpy8I | GTNNAC | 1 cut(s) | 221 |
| HpyAV | CCTTC | 9 cut(s) | 32, 39, 45, 236, 379, 542, 607, 729, 1093 |
| HpyCH4III | ACNGT | 2 cut(s) | 225, 1085 |
| HpyCH4IV | ACGT | 1 cut(s) | 916 |
| HpyCH4V | TGCA | 4 cut(s) | 278, 820, 1077, 1161 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 257, 284, 359, 878, 1172, 1202 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 423, 789 |
| HpySE526I | ACGT | 1 cut(s) | 916 |
| Hsp92II | CATG | 3 cut(s) | 437, 1036, 1081 |
| HspAI | GCGC | 1 cut(s) | 249 |
| Kpn2I | TCCGGA | 1 cut(s) | 544 |
| Ksp22I | TGATCA | 1 cut(s) | 712 |
| Kzo9I | GATC | 4 cut(s) | 535, 701, 712, 928 |
| LmnI | GCTCC | 1 cut(s) | 781 |
| Lsp1109I | GCAGC | 6 cut(s) | 31, 193, 259, 262, 349, 865 |
| LweI | GCATC | 4 cut(s) | 85, 197, 865, 1205 |
| MaeI | CTAG | 1 cut(s) | 1017 |
| MaeII | ACGT | 1 cut(s) | 916 |
| MaeIII | GTNAC | 3 cut(s) | 265, 1063, 1168 |
| MalI | GATC | 4 cut(s) | 537, 703, 714, 930 |
| MboI | GATC | 4 cut(s) | 535, 701, 712, 928 |
| MflI | RGATCY | 2 cut(s) | 535, 928 |
| MhlI | GDGCHC | 2 cut(s) | 566, 778 |
| MluCI | AATT | 9 cut(s) | 159, 748, 758, 890, 993, 1005, 1127, 1154, 1222 |
| MlyI | GAGTC | 2 cut(s) | 978, 1207 |
| MmeI | TCCRAC | 2 cut(s) | 260, 595 |
| MroI | TCCGGA | 1 cut(s) | 544 |
| MroXI | GAANNNNTTC | 1 cut(s) | 751 |
| MseI | TTAA | 1 cut(s) | 165 |
| MspA1I | CMGCKG | 3 cut(s) | 272, 362, 443 |
| MspI | CCGG | 1 cut(s) | 545 |
| MspR9I | CCNGG | 1 cut(s) | 75 |
| Mva1269I | GAATGC | 1 cut(s) | 1018 |
| MvaI | CCWGG | 1 cut(s) | 75 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 257, 284, 359, 878, 1172, 1202 |
| NdeII | GATC | 4 cut(s) | 535, 701, 712, 928 |
| NlaIII | CATG | 3 cut(s) | 437, 1036, 1081 |
| NlaIV | GGNNCC | 4 cut(s) | 231, 420, 667, 777 |
| PceI | AGGCCT | 1 cut(s) | 78 |
| PctI | GAATGC | 1 cut(s) | 1018 |
| PdmI | GAANNNNTTC | 1 cut(s) | 751 |
| PfeI | GAWTC | 3 cut(s) | 8, 356, 950 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 191 |
| PkrI | GCNGC | 7 cut(s) | 46, 176, 183, 274, 277, 364, 880 |
| PleI | GAGTC | 2 cut(s) | 978, 1207 |
| PpsI | GAGTC | 2 cut(s) | 978, 1207 |
| Psp124BI | GAGCTC | 1 cut(s) | 566 |
| Psp6I | CCWGG | 1 cut(s) | 73 |
| PspGI | CCWGG | 1 cut(s) | 73 |
| PspN4I | GGNNCC | 4 cut(s) | 231, 420, 667, 777 |
| PspPI | GGNCC | 2 cut(s) | 129, 194 |
| PstNI | CAGNNNCTG | 4 cut(s) | 191, 257, 275, 365 |
| PsuI | RGATCY | 2 cut(s) | 535, 928 |
| PvuII | CAGCTG | 3 cut(s) | 272, 362, 443 |
| RsaI | GTAC | 6 cut(s) | 432, 553, 679, 766, 786, 1025 |
| RsaNI | GTAC | 6 cut(s) | 431, 552, 678, 765, 785, 1024 |
| SacI | GAGCTC | 1 cut(s) | 566 |
| SaqAI | TTAA | 1 cut(s) | 165 |
| SatI | GCNGC | 7 cut(s) | 45, 175, 182, 273, 276, 363, 879 |
| Sau3AI | GATC | 4 cut(s) | 535, 701, 712, 928 |
| Sau96I | GGNCC | 2 cut(s) | 129, 194 |
| SchI | GAGTC | 2 cut(s) | 978, 1207 |
| ScrFI | CCNGG | 1 cut(s) | 75 |
| SduI | GDGCHC | 2 cut(s) | 566, 778 |
| SfaNI | GCATC | 4 cut(s) | 85, 197, 865, 1205 |
| SfcI | CTRYAG | 1 cut(s) | 1143 |
| SinI | GGWCC | 1 cut(s) | 194 |
| SmlI | CTYRAG | 1 cut(s) | 986 |
| SmoI | CTYRAG | 1 cut(s) | 986 |
| Sse9I | AATT | 9 cut(s) | 159, 748, 758, 890, 993, 1005, 1127, 1154, 1222 |
| SseBI | AGGCCT | 1 cut(s) | 78 |
| SsiI | CCGC | 4 cut(s) | 5, 175, 830, 860 |
| SspMI | CTAG | 1 cut(s) | 1017 |
| SstI | GAGCTC | 1 cut(s) | 566 |
| StuI | AGGCCT | 1 cut(s) | 78 |
| StyD4I | CCNGG | 1 cut(s) | 73 |
| StyI | CCWWGG | 1 cut(s) | 1230 |
| TaaI | ACNGT | 2 cut(s) | 225, 1085 |
| TaiI | ACGT | 1 cut(s) | 919 |
| TaqI | TCGA | 3 cut(s) | 581, 737, 1089 |
| TasI | AATT | 9 cut(s) | 159, 748, 758, 890, 993, 1005, 1127, 1154, 1222 |
| TatI | WGTACW | 1 cut(s) | 430 |
| TauI | GCSGC | 1 cut(s) | 177 |
| TfiI | GAWTC | 3 cut(s) | 8, 356, 950 |
| Tru1I | TTAA | 1 cut(s) | 165 |
| Tru9I | TTAA | 1 cut(s) | 165 |
| TscAI | CASTG | 4 cut(s) | 139, 295, 400, 1168 |
| TseI | GCWGC | 6 cut(s) | 44, 181, 272, 275, 362, 878 |
| TspDTI | ATGAA | 6 cut(s) | 450, 516, 1049, 1094, 1107, 1223 |
| TspGWI | ACGGA | 1 cut(s) | 431 |
| TspRI | CASTG | 4 cut(s) | 139, 295, 400, 1168 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 1 cut(s) | 194 |
| XapI | RAATTY | 6 cut(s) | 748, 758, 890, 1127, 1154, 1222 |
| XmiI | GTMKAC | 1 cut(s) | 220 |
| XmnI | GAANNNNTTC | 1 cut(s) | 751 |
| XspI | CTAG | 1 cut(s) | 1017 |