NUP50 (Nucleoporin 50 kDa)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52380 AT1G52380 AT1G52380 AT1G52380 AT3G15970 AT3G15970 |
| fragaria_vesca | FvH4_6g31000 |
| malus_domestica | MD09G1214400.v1.1 MD17G1196800.v1.1 |
| prunus_persica | Prupe.3G072500_v2.0.a1 |
| pyrus_communis | pycom09g13120 pycom09g13130 pycom17g20180 pycom17g20190 |
| rosa_chinensis | RchiOBHm_Chr2g0137631 |
| rosa_laevigata | RLG00000019665 |
| rosa_multiflora | Rmu_sc0000765.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00106980 |
| rosa_rugosa | Rorug02G0343600 Rorug02G0343700 |
| rosa_samantha | Rh2AG391400 Rh2BG399000 Rh2CG378400 Rh2DG414000 |
| rosa_wichuraiana | Rw2G032060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 301 |
| Acc36I | ACCTGC | 1 cut(s) | 301 |
| AccB1I | GGYRCC | 1 cut(s) | 854 |
| AccI | GTMKAC | 1 cut(s) | 235 |
| AccII | CGCG | 1 cut(s) | 790 |
| AccIII | TCCGGA | 1 cut(s) | 595 |
| AciI | CCGC | 2 cut(s) | 11, 204 |
| AclWI | GGATC | 2 cut(s) | 581, 760 |
| AcoI | YGGCCR | 1 cut(s) | 153 |
| AcsI | RAATTY | 3 cut(s) | 941, 1199, 1267 |
| AfaI | GTAC | 4 cut(s) | 150, 193, 730, 837 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 230, 254, 455 |
| AgsI | TTSAA | 7 cut(s) | 130, 350, 518, 708, 941, 1171, 1177 |
| AjiI | CACGTC | 1 cut(s) | 681 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AluBI | AGCT | 8 cut(s) | 50, 281, 365, 452, 615, 628, 1084, 1250 |
| AluI | AGCT | 8 cut(s) | 50, 281, 365, 452, 615, 628, 1084, 1250 |
| Alw21I | GWGCWC | 1 cut(s) | 617 |
| Alw26I | GTCTC | 5 cut(s) | 72, 296, 788, 881, 1021 |
| AlwI | GGATC | 2 cut(s) | 581, 760 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 272 |
| Ama87I | CYCGRG | 1 cut(s) | 69 |
| Aor13HI | TCCGGA | 1 cut(s) | 595 |
| AoxI | GGCC | 4 cut(s) | 82, 135, 153, 824 |
| ApaI | GGGCCC | 1 cut(s) | 828 |
| ApeKI | GCWGC | 8 cut(s) | 50, 266, 275, 278, 331, 380, 929, 1208 |
| ApoI | RAATTY | 3 cut(s) | 941, 1199, 1267 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 701, 733 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 802 |
| AspLEI | GCGC | 1 cut(s) | 287 |
| AspS9I | GGNCC | 3 cut(s) | 135, 824, 825 |
| AsuHPI | GGTGA | 2 cut(s) | 470, 491 |
| AsuNHI | GCTAGC | 1 cut(s) | 281 |
| AvaI | CYCGRG | 1 cut(s) | 69 |
| BaeGI | GKGCMC | 1 cut(s) | 828 |
| BalI | TGGCCA | 1 cut(s) | 155 |
| BanI | GGYRCC | 1 cut(s) | 854 |
| BanII | GRGCYC | 2 cut(s) | 617, 828 |
| BauI | CACGAG | 1 cut(s) | 306 |
| BbsI | GAAGAC | 1 cut(s) | 1262 |
| Bbv12I | GWGCWC | 1 cut(s) | 617 |
| BbvI | GCAGC | 8 cut(s) | 37, 262, 278, 290, 343, 367, 916, 1195 |
| BccI | CCATC | 6 cut(s) | 542, 707, 842, 944, 1142, 1175 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 83, 117 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BclI | TGATCA | 2 cut(s) | 358, 763 |
| BcoDI | GTCTC | 5 cut(s) | 72, 296, 788, 881, 1021 |
| BfaI | CTAG | 1 cut(s) | 282 |
| BfmI | CTRYAG | 3 cut(s) | 264, 276, 381 |
| BfuAI | ACCTGC | 1 cut(s) | 301 |
| BglII | AGATCT | 1 cut(s) | 979 |
| BisI | GCNGC | 8 cut(s) | 51, 267, 276, 279, 332, 381, 930, 1209 |
| BlsI | GCNGC | 8 cut(s) | 52, 268, 277, 280, 333, 382, 931, 1210 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmeT110I | CYCGRG | 1 cut(s) | 69 |
| BmgBI | CACGTC | 1 cut(s) | 681 |
| BmgT120I | GGNCC | 3 cut(s) | 135, 824, 825 |
| BmiI | GGNNCC | 4 cut(s) | 246, 826, 856, 1186 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BmrI | ACTGGG | 2 cut(s) | 678, 900 |
| BmsI | GCATC | 6 cut(s) | 91, 100, 215, 472, 916, 1289 |
| BmtI | GCTAGC | 1 cut(s) | 285 |
| BmuI | ACTGGG | 2 cut(s) | 678, 900 |
| BpiI | GAAGAC | 1 cut(s) | 1262 |
| BpuEI | CTTGAG | 1 cut(s) | 1016 |
| BsaI | GGTCTC | 1 cut(s) | 788 |
| BsaJI | CCNNGG | 2 cut(s) | 79, 1275 |
| BsaWI | WCCGGW | 1 cut(s) | 595 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 230, 254, 455 |
| Bse1I | ACTGG | 8 cut(s) | 138, 156, 297, 423, 673, 684, 736, 895 |
| Bse3DI | GCAATG | 1 cut(s) | 866 |
| BseAI | TCCGGA | 1 cut(s) | 595 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 2 cut(s) | 79, 1275 |
| BseGI | GGATG | 4 cut(s) | 376, 718, 1153, 1186 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 230, 254, 455 |
| BseMI | GCAATG | 1 cut(s) | 866 |
| BseMII | CTCAG | 2 cut(s) | 843, 996 |
| BseNI | ACTGG | 8 cut(s) | 138, 156, 297, 423, 673, 684, 736, 895 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 1 cut(s) | 828 |
| BseXI | GCAGC | 8 cut(s) | 37, 262, 278, 290, 343, 367, 916, 1195 |
| BseYI | CCCAGC | 2 cut(s) | 53, 365 |
| Bsh1236I | CGCG | 1 cut(s) | 790 |
| BshFI | GGCC | 4 cut(s) | 84, 137, 155, 826 |
| BshNI | GGYRCC | 1 cut(s) | 854 |
| BsiHKAI | GWGCWC | 1 cut(s) | 617 |
| BsiHKCI | CYCGRG | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 596 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 230, 254, 455 |
| BsmAI | GTCTC | 5 cut(s) | 72, 296, 788, 881, 1021 |
| BsmI | GAATGC | 1 cut(s) | 1063 |
| BsnI | GGCC | 4 cut(s) | 84, 137, 155, 826 |
| Bso31I | GGTCTC | 1 cut(s) | 788 |
| BsoBI | CYCGRG | 1 cut(s) | 69 |
| Bsp120I | GGGCCC | 1 cut(s) | 824 |
| Bsp1286I | GDGCHC | 2 cut(s) | 617, 828 |
| Bsp13I | TCCGGA | 1 cut(s) | 595 |
| Bsp1407I | TGTACA | 1 cut(s) | 191 |
| Bsp143I | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| BspACI | CCGC | 2 cut(s) | 11, 204 |
| BspANI | GGCC | 4 cut(s) | 84, 137, 155, 826 |
| BspCNI | CTCAG | 2 cut(s) | 842, 997 |
| BspEI | TCCGGA | 1 cut(s) | 595 |
| BspFNI | CGCG | 1 cut(s) | 790 |
| BspLI | GGNNCC | 4 cut(s) | 246, 826, 856, 1186 |
| BspMAI | CTGCAG | 3 cut(s) | 268, 280, 385 |
| BspMI | ACCTGC | 1 cut(s) | 301 |
| BspOI | GCTAGC | 1 cut(s) | 285 |
| BspPI | GGATC | 2 cut(s) | 581, 760 |
| BspT107I | GGYRCC | 1 cut(s) | 854 |
| BspTNI | GGTCTC | 1 cut(s) | 788 |
| BsrDI | GCAATG | 1 cut(s) | 866 |
| BsrGI | TGTACA | 1 cut(s) | 191 |
| BsrI | ACTGG | 8 cut(s) | 138, 156, 297, 423, 673, 684, 736, 895 |
| BssECI | CCNNGG | 2 cut(s) | 79, 1275 |
| BssMI | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| BssNAI | GTATAC | 1 cut(s) | 236 |
| BssSI | CACGAG | 1 cut(s) | 306 |
| BssT1I | CCWWGG | 1 cut(s) | 1275 |
| Bst1107I | GTATAC | 1 cut(s) | 236 |
| Bst2BI | CACGAG | 1 cut(s) | 306 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| Bst4CI | ACNGT | 2 cut(s) | 66, 1130 |
| Bst6I | CTCTTC | 1 cut(s) | 492 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 272, 293 |
| BstAUI | TGTACA | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 5 cut(s) | 48, 185, 283, 1063, 1120 |
| BstDEI | CTNAG | 3 cut(s) | 829, 840, 1005 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 252 |
| BstF5I | GGATG | 4 cut(s) | 376, 718, 1153, 1186 |
| BstFNI | CGCG | 1 cut(s) | 790 |
| BstHHI | GCGC | 1 cut(s) | 287 |
| BstKTI | GATC | 5 cut(s) | 361, 589, 755, 766, 982 |
| BstMAI | GTCTC | 5 cut(s) | 72, 296, 788, 881, 1021 |
| BstMBI | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BstSFI | CTRYAG | 3 cut(s) | 264, 276, 381 |
| BstSLI | GKGCMC | 1 cut(s) | 828 |
| BstUI | CGCG | 1 cut(s) | 790 |
| BstV1I | GCAGC | 8 cut(s) | 37, 262, 278, 290, 343, 367, 916, 1195 |
| BstV2I | GAAGAC | 1 cut(s) | 1262 |
| BstX2I | RGATCY | 1 cut(s) | 979 |
| BstYI | RGATCY | 1 cut(s) | 979 |
| BstZ17I | GTATAC | 1 cut(s) | 236 |
| BsuRI | GGCC | 4 cut(s) | 84, 137, 155, 826 |
| BtrI | CACGTC | 1 cut(s) | 681 |
| BtsCI | GGATG | 4 cut(s) | 376, 718, 1153, 1186 |
| BtsI | GCAGTG | 2 cut(s) | 194, 918 |
| BtsIMutI | CAGTG | 5 cut(s) | 145, 194, 304, 430, 918 |
| BveI | ACCTGC | 1 cut(s) | 301 |
| Cac8I | GCNNGC | 5 cut(s) | 48, 185, 283, 1063, 1120 |
| CaiI | CAGNNNCTG | 1 cut(s) | 272 |
| CfoI | GCGC | 1 cut(s) | 287 |
| Cfr13I | GGNCC | 3 cut(s) | 135, 824, 825 |
| Csp6I | GTAC | 4 cut(s) | 149, 192, 729, 836 |
| CviAII | CATG | 3 cut(s) | 1078, 1093, 1123 |
| CviQI | GTAC | 4 cut(s) | 149, 192, 729, 836 |
| DdeI | CTNAG | 3 cut(s) | 829, 840, 1005 |
| DpnI | GATC | 5 cut(s) | 360, 588, 754, 765, 981 |
| DpnII | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| EaeI | YGGCCR | 1 cut(s) | 153 |
| Eam1104I | CTCTTC | 1 cut(s) | 492 |
| EarI | CTCTTC | 1 cut(s) | 492 |
| EciI | GGCGGA | 1 cut(s) | 26 |
| Ecl136II | GAGCTC | 1 cut(s) | 615 |
| Eco130I | CCWWGG | 1 cut(s) | 1275 |
| Eco147I | AGGCCT | 1 cut(s) | 84 |
| Eco24I | GRGCYC | 2 cut(s) | 617, 828 |
| Eco31I | GGTCTC | 1 cut(s) | 788 |
| Eco53kI | GAGCTC | 1 cut(s) | 615 |
| Eco88I | CYCGRG | 1 cut(s) | 69 |
| EcoICRI | GAGCTC | 1 cut(s) | 615 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 252 |
| EcoO109I | RGGNCCY | 2 cut(s) | 824, 825 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| EcoT14I | CCWWGG | 1 cut(s) | 1275 |
| EcoT38I | GRGCYC | 2 cut(s) | 617, 828 |
| ErhI | CCWWGG | 1 cut(s) | 1275 |
| FaeI | CATG | 3 cut(s) | 1081, 1096, 1126 |
| FaiI | YATR | 8 cut(s) | 236, 1025, 1079, 1094, 1124, 1190, 1224, 1253 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1002, 1034 |
| FatI | CATG | 3 cut(s) | 1077, 1092, 1122 |
| FauI | CCCGC | 1 cut(s) | 211 |
| FbaI | TGATCA | 2 cut(s) | 358, 763 |
| FblI | GTMKAC | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 8 cut(s) | 51, 267, 276, 279, 332, 381, 930, 1209 |
| FokI | GGATG | 4 cut(s) | 383, 725, 1160, 1193 |
| FriOI | GRGCYC | 2 cut(s) | 617, 828 |
| Fsp4HI | GCNGC | 8 cut(s) | 51, 267, 276, 279, 332, 381, 930, 1209 |
| FspBI | CTAG | 1 cut(s) | 282 |
| GlaI | GCGC | 1 cut(s) | 286 |
| GluI | GCNGC | 8 cut(s) | 51, 267, 276, 279, 332, 381, 930, 1209 |
| GsaI | CCCAGC | 2 cut(s) | 57, 369 |
| HaeIII | GGCC | 4 cut(s) | 84, 137, 155, 826 |
| HapII | CCGG | 1 cut(s) | 596 |
| HhaI | GCGC | 1 cut(s) | 287 |
| Hin1II | CATG | 3 cut(s) | 1081, 1096, 1126 |
| Hin6I | GCGC | 1 cut(s) | 285 |
| HinP1I | GCGC | 1 cut(s) | 285 |
| HinfI | GANTC | 5 cut(s) | 14, 374, 1001, 1029, 1258 |
| HpaII | CCGG | 1 cut(s) | 596 |
| HphI | GGTGA | 2 cut(s) | 470, 491 |
| Hpy166II | GTNNAC | 3 cut(s) | 192, 236, 743 |
| Hpy188I | TCNGA | 8 cut(s) | 19, 109, 316, 984, 1000, 1006, 1056, 1285 |
| Hpy188III | TCNNGA | 6 cut(s) | 71, 130, 596, 663, 1087, 1262 |
| Hpy8I | GTNNAC | 3 cut(s) | 192, 236, 743 |
| Hpy99I | CGWCG | 1 cut(s) | 183 |
| HpyCH4III | ACNGT | 2 cut(s) | 66, 1130 |
| HpyCH4IV | ACGT | 2 cut(s) | 680, 967 |
| HpyCH4V | TGCA | 9 cut(s) | 113, 266, 278, 383, 485, 722, 871, 1061, 1122 |
| HpyF3I | CTNAG | 3 cut(s) | 829, 840, 1005 |
| HpySE526I | ACGT | 2 cut(s) | 680, 967 |
| Hsp92II | CATG | 3 cut(s) | 1081, 1096, 1126 |
| HspAI | GCGC | 1 cut(s) | 285 |
| Kpn2I | TCCGGA | 1 cut(s) | 595 |
| Ksp22I | TGATCA | 2 cut(s) | 358, 763 |
| Kzo9I | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| LmnI | GCTCC | 1 cut(s) | 257 |
| Lsp1109I | GCAGC | 8 cut(s) | 37, 262, 278, 290, 343, 367, 916, 1195 |
| LweI | GCATC | 6 cut(s) | 91, 100, 215, 472, 916, 1289 |
| MaeI | CTAG | 1 cut(s) | 282 |
| MaeII | ACGT | 2 cut(s) | 680, 967 |
| MaeIII | GTNAC | 3 cut(s) | 602, 1108, 1213 |
| MalI | GATC | 5 cut(s) | 360, 588, 754, 765, 981 |
| MboI | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| MboII | GAAGA | 9 cut(s) | 174, 509, 530, 548, 566, 795, 908, 1111, 1267 |
| MflI | RGATCY | 1 cut(s) | 979 |
| MhlI | GDGCHC | 2 cut(s) | 617, 828 |
| MlsI | TGGCCA | 1 cut(s) | 155 |
| MluCI | AATT | 7 cut(s) | 165, 513, 941, 1038, 1050, 1199, 1267 |
| MluNI | TGGCCA | 1 cut(s) | 155 |
| MlyI | GAGTC | 3 cut(s) | 368, 1023, 1252 |
| MmeI | TCCRAC | 2 cut(s) | 275, 646 |
| Mox20I | TGGCCA | 1 cut(s) | 155 |
| MroI | TCCGGA | 1 cut(s) | 595 |
| MroXI | GAANNNNTTC | 1 cut(s) | 802 |
| MscI | TGGCCA | 1 cut(s) | 155 |
| MseI | TTAA | 3 cut(s) | 36, 990, 1291 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1091 |
| Msp20I | TGGCCA | 1 cut(s) | 155 |
| MspA1I | CMGCKG | 1 cut(s) | 452 |
| MspI | CCGG | 1 cut(s) | 596 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| Mva1269I | GAATGC | 1 cut(s) | 1063 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| MvnI | CGCG | 1 cut(s) | 790 |
| NdeII | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| NheI | GCTAGC | 1 cut(s) | 281 |
| NlaIII | CATG | 3 cut(s) | 1081, 1096, 1126 |
| NlaIV | GGNNCC | 4 cut(s) | 246, 826, 856, 1186 |
| PaqCI | CACCTGC | 1 cut(s) | 301 |
| PceI | AGGCCT | 1 cut(s) | 84 |
| PctI | GAATGC | 1 cut(s) | 1063 |
| PdmI | GAANNNNTTC | 1 cut(s) | 802 |
| PfeI | GAWTC | 2 cut(s) | 14, 1001 |
| PkrI | GCNGC | 8 cut(s) | 52, 268, 277, 280, 333, 382, 931, 1210 |
| PleI | GAGTC | 3 cut(s) | 368, 1023, 1252 |
| PpsI | GAGTC | 3 cut(s) | 368, 1023, 1252 |
| Psp124BI | GAGCTC | 1 cut(s) | 617 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspFI | CCCAGC | 2 cut(s) | 53, 365 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 4 cut(s) | 246, 826, 856, 1186 |
| PspOMI | GGGCCC | 1 cut(s) | 824 |
| PspPI | GGNCC | 3 cut(s) | 135, 824, 825 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 784, 816 |
| PstI | CTGCAG | 3 cut(s) | 268, 280, 385 |
| PstNI | CAGNNNCTG | 1 cut(s) | 272 |
| PsuI | RGATCY | 1 cut(s) | 979 |
| PvuII | CAGCTG | 1 cut(s) | 452 |
| RsaI | GTAC | 4 cut(s) | 150, 193, 730, 837 |
| RsaNI | GTAC | 4 cut(s) | 149, 192, 729, 836 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1091 |
| SacI | GAGCTC | 1 cut(s) | 617 |
| SaqAI | TTAA | 3 cut(s) | 36, 990, 1291 |
| SatI | GCNGC | 8 cut(s) | 51, 267, 276, 279, 332, 381, 930, 1209 |
| Sau3AI | GATC | 5 cut(s) | 358, 586, 752, 763, 979 |
| Sau96I | GGNCC | 3 cut(s) | 135, 824, 825 |
| SchI | GAGTC | 3 cut(s) | 368, 1023, 1252 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SduI | GDGCHC | 2 cut(s) | 617, 828 |
| SfaNI | GCATC | 6 cut(s) | 91, 100, 215, 472, 916, 1289 |
| SfcI | CTRYAG | 3 cut(s) | 264, 276, 381 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1091 |
| SmlI | CTYRAG | 1 cut(s) | 1031 |
| SmoI | CTYRAG | 1 cut(s) | 1031 |
| Sse9I | AATT | 7 cut(s) | 165, 513, 941, 1038, 1050, 1199, 1267 |
| SseBI | AGGCCT | 1 cut(s) | 84 |
| SsiI | CCGC | 2 cut(s) | 11, 204 |
| SspMI | CTAG | 1 cut(s) | 282 |
| SstI | GAGCTC | 1 cut(s) | 617 |
| StuI | AGGCCT | 1 cut(s) | 84 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| StyI | CCWWGG | 1 cut(s) | 1275 |
| TaaI | ACNGT | 2 cut(s) | 66, 1130 |
| TaiI | ACGT | 2 cut(s) | 683, 970 |
| TaqI | TCGA | 2 cut(s) | 632, 1194 |
| TasI | AATT | 7 cut(s) | 165, 513, 941, 1038, 1050, 1199, 1267 |
| TatI | WGTACW | 1 cut(s) | 191 |
| TfiI | GAWTC | 2 cut(s) | 14, 1001 |
| Tru1I | TTAA | 3 cut(s) | 36, 990, 1291 |
| Tru9I | TTAA | 3 cut(s) | 36, 990, 1291 |
| TscAI | CASTG | 5 cut(s) | 145, 194, 304, 430, 925 |
| TseI | GCWGC | 8 cut(s) | 50, 266, 275, 278, 331, 380, 929, 1208 |
| TspDTI | ATGAA | 6 cut(s) | 429, 681, 1094, 1139, 1152, 1268 |
| TspGWI | ACGGA | 1 cut(s) | 449 |
| TspRI | CASTG | 5 cut(s) | 145, 194, 304, 430, 925 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 252 |
| XapI | RAATTY | 3 cut(s) | 941, 1199, 1267 |
| XmiI | GTMKAC | 1 cut(s) | 235 |
| XmnI | GAANNNNTTC | 1 cut(s) | 802 |
| XspI | CTAG | 1 cut(s) | 282 |