NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52380 AT1G52380 AT1G52380 AT1G52380 AT3G15970 AT3G15970 |
| fragaria_vesca | FvH4_6g31000 |
| malus_domestica | MD09G1214400.v1.1 MD17G1196800.v1.1 |
| prunus_persica | Prupe.3G072500_v2.0.a1 |
| pyrus_communis | pycom09g13120 pycom09g13130 pycom17g20180 pycom17g20190 |
| rosa_chinensis | RchiOBHm_Chr2g0137631 |
| rosa_laevigata | RLG00000019665 |
| rosa_multiflora | Rmu_sc0000765.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00106980 |
| rosa_rugosa | Rorug02G0343600 Rorug02G0343700 |
| rosa_samantha | Rh2AG391400 Rh2BG399000 Rh2CG378400 Rh2DG414000 |
| rosa_wichuraiana | Rw2G032060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 292 |
| AccB1I | GGYRCC | 1 cut(s) | 644 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 500 |
| AccI | GTMKAC | 1 cut(s) | 627 |
| AciI | CCGC | 4 cut(s) | 5, 858, 962, 1281 |
| AclI | AACGTT | 1 cut(s) | 1151 |
| AcsI | RAATTY | 3 cut(s) | 384, 974, 1238 |
| AcuI | CTGAAG | 4 cut(s) | 261, 465, 660, 1037 |
| AfaI | GTAC | 3 cut(s) | 279, 637, 772 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 215, 430, 500, 755, 864 |
| AgsI | TTSAA | 8 cut(s) | 124, 655, 873, 900, 974, 1096, 1210, 1216 |
| AhlI | ACTAGT | 1 cut(s) | 1057 |
| AjnI | CCWGG | 2 cut(s) | 73, 406 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 483, 515 |
| AluBI | AGCT | 5 cut(s) | 245, 497, 670, 1123, 1277 |
| AluI | AGCT | 5 cut(s) | 245, 497, 670, 1123, 1277 |
| Alw26I | GTCTC | 3 cut(s) | 104, 560, 914 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 407 |
| AoxI | GGCC | 3 cut(s) | 76, 129, 866 |
| ApeKI | GCWGC | 4 cut(s) | 44, 347, 667, 860 |
| ApoI | RAATTY | 3 cut(s) | 384, 974, 1238 |
| AseI | ATTAAT | 1 cut(s) | 834 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 844 |
| AspS9I | GGNCC | 4 cut(s) | 129, 194, 866, 1224 |
| AsuHPI | GGTGA | 2 cut(s) | 539, 575 |
| AsuNHI | GCTAGC | 1 cut(s) | 145 |
| AvaII | GGWCC | 2 cut(s) | 194, 1224 |
| BanI | GGYRCC | 1 cut(s) | 644 |
| BauI | CACGAG | 1 cut(s) | 63 |
| BbsI | GAAGAC | 2 cut(s) | 384, 1295 |
| BbvI | GCAGC | 4 cut(s) | 31, 334, 679, 872 |
| BccI | CCATC | 7 cut(s) | 244, 518, 554, 749, 977, 1181, 1214 |
| BciT130I | CCWGG | 2 cut(s) | 75, 408 |
| BciVI | GTATCC | 1 cut(s) | 213 |
| BcoDI | GTCTC | 3 cut(s) | 104, 560, 914 |
| BcuI | ACTAGT | 1 cut(s) | 1057 |
| BfaI | CTAG | 5 cut(s) | 107, 146, 246, 882, 1058 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfuAI | ACCTGC | 1 cut(s) | 292 |
| BfuI | GTATCC | 1 cut(s) | 213 |
| BglII | AGATCT | 1 cut(s) | 1012 |
| BisI | GCNGC | 5 cut(s) | 45, 348, 668, 858, 861 |
| BlsI | GCNGC | 5 cut(s) | 46, 349, 669, 859, 862 |
| BmcAI | AGTACT | 1 cut(s) | 772 |
| Bme1390I | CCNGG | 2 cut(s) | 75, 408 |
| Bme18I | GGWCC | 2 cut(s) | 194, 1224 |
| BmgT120I | GGNCC | 4 cut(s) | 129, 194, 866, 1224 |
| BmiI | GGNNCC | 3 cut(s) | 231, 646, 1225 |
| BmrFI | CCNGG | 2 cut(s) | 75, 408 |
| BmrI | ACTGGG | 2 cut(s) | 384, 720 |
| BmsI | GCATC | 2 cut(s) | 301, 949 |
| BmtI | GCTAGC | 1 cut(s) | 149 |
| BmuI | ACTGGG | 2 cut(s) | 384, 720 |
| BpiI | GAAGAC | 2 cut(s) | 384, 1295 |
| BpmI | CTGGAG | 1 cut(s) | 945 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| Bsa29I | ATCGAT | 1 cut(s) | 1173 |
| BsaBI | GATNNNNATC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 4 cut(s) | 73, 407, 750, 1071 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 215, 430, 500, 755, 864 |
| Bse8I | GATNNNNATC | 1 cut(s) | 315 |
| BseBI | CCWGG | 2 cut(s) | 75, 408 |
| BseCI | ATCGAT | 1 cut(s) | 1173 |
| BseDI | CCNNGG | 4 cut(s) | 73, 407, 750, 1071 |
| BseGI | GGATG | 3 cut(s) | 760, 1192, 1225 |
| BseJI | GATNNNNATC | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 215, 430, 500, 755, 864 |
| BseMII | CTCAG | 1 cut(s) | 420 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| BseXI | GCAGC | 4 cut(s) | 31, 334, 679, 872 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| BsgI | GTGCAG | 1 cut(s) | 270 |
| BshFI | GGCC | 3 cut(s) | 78, 131, 868 |
| BshNI | GGYRCC | 1 cut(s) | 644 |
| BshVI | ATCGAT | 1 cut(s) | 1173 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 215, 430, 500, 755, 864 |
| BsmAI | GTCTC | 3 cut(s) | 104, 560, 914 |
| BsmI | GAATGC | 1 cut(s) | 1102 |
| BsnI | GGCC | 3 cut(s) | 78, 131, 868 |
| Bsp143I | GATC | 2 cut(s) | 805, 1012 |
| BspACI | CCGC | 4 cut(s) | 5, 858, 962, 1281 |
| BspANI | GGCC | 3 cut(s) | 78, 131, 868 |
| BspCNI | CTCAG | 1 cut(s) | 421 |
| BspDI | ATCGAT | 1 cut(s) | 1173 |
| BspHI | TCATGA | 1 cut(s) | 1062 |
| BspLI | GGNNCC | 3 cut(s) | 231, 646, 1225 |
| BspMAI | CTGCAG | 1 cut(s) | 352 |
| BspMI | ACCTGC | 1 cut(s) | 292 |
| BspOI | GCTAGC | 1 cut(s) | 149 |
| BspT107I | GGYRCC | 1 cut(s) | 644 |
| BssECI | CCNNGG | 4 cut(s) | 73, 407, 750, 1071 |
| BssMI | GATC | 2 cut(s) | 805, 1012 |
| BssSI | CACGAG | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 2 cut(s) | 750, 1071 |
| Bst2BI | CACGAG | 1 cut(s) | 63 |
| Bst2UI | CCWGG | 2 cut(s) | 75, 408 |
| Bst4CI | ACNGT | 2 cut(s) | 553, 625 |
| Bst6I | CTCTTC | 3 cut(s) | 578, 591, 596 |
| BstC8I | GCNNGC | 4 cut(s) | 147, 335, 1125, 1159 |
| BstDEI | CTNAG | 2 cut(s) | 33, 429 |
| BstF5I | GGATG | 3 cut(s) | 760, 1192, 1225 |
| BstKTI | GATC | 2 cut(s) | 808, 1015 |
| BstMAI | GTCTC | 3 cut(s) | 104, 560, 914 |
| BstMBI | GATC | 2 cut(s) | 805, 1012 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 293, 1049 |
| BstNI | CCWGG | 2 cut(s) | 75, 408 |
| BstSCI | CCNGG | 2 cut(s) | 73, 406 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstV1I | GCAGC | 4 cut(s) | 31, 334, 679, 872 |
| BstV2I | GAAGAC | 2 cut(s) | 384, 1295 |
| BstX2I | RGATCY | 1 cut(s) | 1012 |
| BstYI | RGATCY | 1 cut(s) | 1012 |
| Bsu15I | ATCGAT | 1 cut(s) | 1173 |
| BsuI | GTATCC | 1 cut(s) | 213 |
| BsuRI | GGCC | 3 cut(s) | 78, 131, 868 |
| BsuTUI | ATCGAT | 1 cut(s) | 1173 |
| BtsCI | GGATG | 3 cut(s) | 760, 1192, 1225 |
| BtsI | GCAGTG | 1 cut(s) | 951 |
| BtsIMutI | CAGTG | 7 cut(s) | 139, 270, 295, 397, 493, 777, 951 |
| BveI | ACCTGC | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 4 cut(s) | 147, 335, 1125, 1159 |
| CaiI | CAGNNNCTG | 1 cut(s) | 407 |
| CciI | TCATGA | 1 cut(s) | 1062 |
| Cfr13I | GGNCC | 4 cut(s) | 129, 194, 866, 1224 |
| ClaI | ATCGAT | 1 cut(s) | 1173 |
| Csp6I | GTAC | 3 cut(s) | 278, 636, 771 |
| CviAII | CATG | 5 cut(s) | 419, 633, 1063, 1117, 1162 |
| CviQI | GTAC | 3 cut(s) | 278, 636, 771 |
| DdeI | CTNAG | 2 cut(s) | 33, 429 |
| DpnI | GATC | 2 cut(s) | 807, 1014 |
| DpnII | GATC | 2 cut(s) | 805, 1012 |
| Eam1104I | CTCTTC | 3 cut(s) | 578, 591, 596 |
| EarI | CTCTTC | 3 cut(s) | 578, 591, 596 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 2 cut(s) | 750, 1071 |
| Eco147I | AGGCCT | 1 cut(s) | 78 |
| Eco47I | GGWCC | 2 cut(s) | 194, 1224 |
| Eco57I | CTGAAG | 4 cut(s) | 261, 465, 660, 1037 |
| EcoO109I | RGGNCCY | 2 cut(s) | 194, 866 |
| EcoRII | CCWGG | 2 cut(s) | 73, 406 |
| EcoT14I | CCWWGG | 2 cut(s) | 750, 1071 |
| ErhI | CCWWGG | 2 cut(s) | 750, 1071 |
| FaeI | CATG | 5 cut(s) | 422, 636, 1066, 1120, 1165 |
| FaiI | YATR | 8 cut(s) | 420, 634, 1064, 1118, 1133, 1163, 1229, 1286 |
| FatI | CATG | 5 cut(s) | 418, 632, 1062, 1116, 1161 |
| FblI | GTMKAC | 1 cut(s) | 627 |
| Fnu4HI | GCNGC | 5 cut(s) | 45, 348, 668, 858, 861 |
| FokI | GGATG | 3 cut(s) | 767, 1199, 1232 |
| Fsp4HI | GCNGC | 5 cut(s) | 45, 348, 668, 858, 861 |
| FspBI | CTAG | 5 cut(s) | 107, 146, 246, 882, 1058 |
| GluI | GCNGC | 5 cut(s) | 45, 348, 668, 858, 861 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| GsuI | CTGGAG | 1 cut(s) | 945 |
| HaeIII | GGCC | 3 cut(s) | 78, 131, 868 |
| Hin1II | CATG | 5 cut(s) | 422, 636, 1066, 1120, 1165 |
| HincII | GTYRAC | 1 cut(s) | 628 |
| HindII | GTYRAC | 1 cut(s) | 628 |
| HindIII | AAGCTT | 1 cut(s) | 1121 |
| HinfI | GANTC | 5 cut(s) | 8, 341, 437, 1034, 1291 |
| HphI | GGTGA | 2 cut(s) | 539, 575 |
| Hpy166II | GTNNAC | 3 cut(s) | 491, 628, 785 |
| Hpy188I | TCNGA | 8 cut(s) | 13, 103, 183, 241, 307, 328, 1017, 1033 |
| Hpy188III | TCNNGA | 6 cut(s) | 65, 124, 463, 705, 1063, 1295 |
| Hpy8I | GTNNAC | 3 cut(s) | 491, 628, 785 |
| Hpy99I | CGWCG | 1 cut(s) | 177 |
| HpyCH4III | ACNGT | 2 cut(s) | 553, 625 |
| HpyCH4IV | ACGT | 1 cut(s) | 1151 |
| HpyCH4V | TGCA | 7 cut(s) | 251, 350, 904, 914, 1100, 1127, 1161 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 293, 1049 |
| HpyF3I | CTNAG | 2 cut(s) | 33, 429 |
| HpySE526I | ACGT | 1 cut(s) | 1151 |
| Hsp92II | CATG | 5 cut(s) | 422, 636, 1066, 1120, 1165 |
| Kzo9I | GATC | 2 cut(s) | 805, 1012 |
| Lsp1109I | GCAGC | 4 cut(s) | 31, 334, 679, 872 |
| LweI | GCATC | 2 cut(s) | 301, 949 |
| MaeI | CTAG | 5 cut(s) | 107, 146, 246, 882, 1058 |
| MaeII | ACGT | 1 cut(s) | 1151 |
| MaeIII | GTNAC | 4 cut(s) | 553, 887, 1147, 1252 |
| MalI | GATC | 2 cut(s) | 807, 1014 |
| MboI | GATC | 2 cut(s) | 805, 1012 |
| MfeI | CAATTG | 1 cut(s) | 873 |
| MflI | RGATCY | 1 cut(s) | 1012 |
| MluCI | AATT | 6 cut(s) | 384, 873, 974, 1077, 1089, 1238 |
| MlyI | GAGTC | 1 cut(s) | 1285 |
| MmeI | TCCRAC | 3 cut(s) | 206, 228, 481 |
| MroXI | GAANNNNTTC | 1 cut(s) | 844 |
| MseI | TTAA | 2 cut(s) | 165, 834 |
| MspA1I | CMGCKG | 1 cut(s) | 497 |
| MspR9I | CCNGG | 2 cut(s) | 75, 408 |
| MunI | CAATTG | 1 cut(s) | 873 |
| Mva1269I | GAATGC | 1 cut(s) | 1102 |
| MvaI | CCWGG | 2 cut(s) | 75, 408 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 293, 1049 |
| NdeII | GATC | 2 cut(s) | 805, 1012 |
| NheI | GCTAGC | 1 cut(s) | 145 |
| NlaIII | CATG | 5 cut(s) | 422, 636, 1066, 1120, 1165 |
| NlaIV | GGNNCC | 3 cut(s) | 231, 646, 1225 |
| NmuCI | GTSAC | 1 cut(s) | 887 |
| PagI | TCATGA | 1 cut(s) | 1062 |
| PceI | AGGCCT | 1 cut(s) | 78 |
| PctI | GAATGC | 1 cut(s) | 1102 |
| PdmI | GAANNNNTTC | 1 cut(s) | 844 |
| PfeI | GAWTC | 4 cut(s) | 8, 341, 437, 1034 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 500 |
| PkrI | GCNGC | 5 cut(s) | 46, 349, 669, 859, 862 |
| PleI | GAGTC | 1 cut(s) | 1285 |
| PpsI | GAGTC | 1 cut(s) | 1285 |
| PpuMI | RGGWCCY | 1 cut(s) | 194 |
| PshBI | ATTAAT | 1 cut(s) | 834 |
| Psp1406I | AACGTT | 1 cut(s) | 1151 |
| Psp5II | RGGWCCY | 1 cut(s) | 194 |
| Psp6I | CCWGG | 2 cut(s) | 73, 406 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PspGI | CCWGG | 2 cut(s) | 73, 406 |
| PspN4I | GGNNCC | 3 cut(s) | 231, 646, 1225 |
| PspPI | GGNCC | 4 cut(s) | 129, 194, 866, 1224 |
| PspPPI | RGGWCCY | 1 cut(s) | 194 |
| PstI | CTGCAG | 1 cut(s) | 352 |
| PstNI | CAGNNNCTG | 1 cut(s) | 407 |
| PsuI | RGATCY | 1 cut(s) | 1012 |
| PvuII | CAGCTG | 1 cut(s) | 497 |
| RsaI | GTAC | 3 cut(s) | 279, 637, 772 |
| RsaNI | GTAC | 3 cut(s) | 278, 636, 771 |
| SalI | GTCGAC | 1 cut(s) | 626 |
| SaqAI | TTAA | 2 cut(s) | 165, 834 |
| SatI | GCNGC | 5 cut(s) | 45, 348, 668, 858, 861 |
| Sau3AI | GATC | 2 cut(s) | 805, 1012 |
| Sau96I | GGNCC | 4 cut(s) | 129, 194, 866, 1224 |
| ScaI | AGTACT | 1 cut(s) | 772 |
| SchI | GAGTC | 1 cut(s) | 1285 |
| ScrFI | CCNGG | 2 cut(s) | 75, 408 |
| SfaNI | GCATC | 2 cut(s) | 301, 949 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| SinI | GGWCC | 2 cut(s) | 194, 1224 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| SpeI | ACTAGT | 1 cut(s) | 1057 |
| Sse9I | AATT | 6 cut(s) | 384, 873, 974, 1077, 1089, 1238 |
| SseBI | AGGCCT | 1 cut(s) | 78 |
| SsiI | CCGC | 4 cut(s) | 5, 858, 962, 1281 |
| SspI | AATATT | 1 cut(s) | 481 |
| SspMI | CTAG | 5 cut(s) | 107, 146, 246, 882, 1058 |
| StuI | AGGCCT | 1 cut(s) | 78 |
| StyD4I | CCNGG | 2 cut(s) | 73, 406 |
| StyI | CCWWGG | 2 cut(s) | 750, 1071 |
| TaaI | ACNGT | 2 cut(s) | 553, 625 |
| TaiI | ACGT | 1 cut(s) | 1154 |
| TaqI | TCGA | 3 cut(s) | 627, 674, 1173 |
| TasI | AATT | 6 cut(s) | 384, 873, 974, 1077, 1089, 1238 |
| TatI | WGTACW | 2 cut(s) | 635, 770 |
| TauI | GCSGC | 1 cut(s) | 860 |
| TfiI | GAWTC | 4 cut(s) | 8, 341, 437, 1034 |
| Tru1I | TTAA | 2 cut(s) | 165, 834 |
| Tru9I | TTAA | 2 cut(s) | 165, 834 |
| TscAI | CASTG | 7 cut(s) | 139, 277, 295, 397, 493, 784, 958 |
| TseFI | GTSAC | 1 cut(s) | 887 |
| TseI | GCWGC | 4 cut(s) | 44, 347, 667, 860 |
| Tsp45I | GTSAC | 1 cut(s) | 887 |
| TspDTI | ATGAA | 7 cut(s) | 609, 633, 753, 1133, 1178, 1191, 1301 |
| TspRI | CASTG | 7 cut(s) | 139, 277, 295, 397, 493, 784, 958 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 500 |
| VpaK11BI | GGWCC | 2 cut(s) | 194, 1224 |
| VspI | ATTAAT | 1 cut(s) | 834 |
| XapI | RAATTY | 3 cut(s) | 384, 974, 1238 |
| XmiI | GTMKAC | 1 cut(s) | 627 |
| XmnI | GAANNNNTTC | 1 cut(s) | 844 |
| XspI | CTAG | 5 cut(s) | 107, 146, 246, 882, 1058 |
| ZrmI | AGTACT | 1 cut(s) | 772 |