Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0007109

Physical Location & Seq

Genomic Coordinates Forward (+)

21079805 .. 21082646

Gene Structure 2842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1214400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGCGGATTTGGAAAATGCTCTTCCACTTAATAAGAAGCGAGCTGCTGGGAGGGAACTCTCTCGGGATAACCCAGGCCTTGATGACGAGGACGATGCTTCTGAACCAGAGGCAGGAACTTTCAAGAGGGCCAGTGAGGAGGTGCTGGCAACCAGAAGAATTGTTAAGGTTCGTCGCCAGCAGACTACATCTGCCCCCACTGCTAATACTTCCAATCCTTTTGCTGGCATACGCTTGGTTCCTCCAACAGAAGAAAGTCCAGCCCCTGCTGAAGCTGCAGCTAGCTCACCACCTGCCTGTGAGACACGAGTTTCAGATGAGGATAATAAGCAGCCAGAAAGCAAGGTTGAACAGGCTGATCAAGTTGGGGATGACTCTGCAGCAGATAAGGAGAACGTTGTGAAGGAGAACAATGAAATTTCCAGTGAGGCAACGGAACCTGAACCAGATGTGGGTGAAAATAAGACAAATGGGGGTGAGACGGTAAATGAGGAAGAGGAAAAGGCTGAAATTAAAGATAAGAAAGATAATGAAGATAACAAGGATAACAAAAGCGAAAATGTAGATCCAAGTCCGGAAGGTAACTCGTTGAGCTCATTCCAACAGCTTTCGAGTAGCCAAAATGCCTTCACAAATATCTCTGGAACCGGGTTCTCCACATCTAGTTTTTCATTTGGGCTTATTTCAAAGGATGGGTCCACATTGGGTACTGGCTCTGGTTCACTTTTTGGATCAAATATTGATAAGCCTTCTGGTTTTGGTCTCTCGAGTAATGGAAGTTCTTCACTCTTTGGCACATCAGGCCCCTCAATTGTACCTAAGAGTGATGGTGCTGCCTTCCCGCAAATGCAAGAGGTTGCAGTTGAGACTGGGGAAGAAAATGAGAAAGTGGTTTTCACTGCTGATGCTGCGTTGTTTGAGTTTATTGATGGAGGCTGGAAGGAACGTGGAAAGGGAGATCTGAAAGTTAATGTATCTGAATCTGAGAAAGCCAGACTTGTTATGAGACTGAAGGGAATTAGAAAGGTAATTCTGAATGCAAGCCTTTACCCAGACATGAAGCTCGCGAACATGGAGAAGAAAGGTGTTACATTTGCCTGCATGAACAGCATCGATGAAAAGAAGGATGGGCTTTCCACCTTTGCTTTGAAGTTCAAGGATGGTTCCGTAGTCGAGGAATTTCGTGCTGCTGTTACAGCACATAAAGATAAAGGAAAGGCACCTACAGCTATGAAGACTCCAGAAAATTCTCCCAAGGCATCAGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000056 GO:0000082 GO:0000226 GO:0000278 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006403 GO:0006405 GO:0006508 GO:0006511 GO:0006606 GO:0006611 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0008104 GO:0008150 GO:0008152 GO:0008536 GO:0009056 GO:0009057 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017016 GO:0017038 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0022402 GO:0022613 GO:0030163 GO:0031267 GO:0031323 GO:0031326 GO:0031503 GO:0031935 GO:0031938 GO:0033036 GO:0033043 GO:0033044 GO:0033365 GO:0033750 GO:0034504 GO:0034613 GO:0042254 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051020 GO:0051128 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051603 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0060255 GO:0060968 GO:0065007 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902275 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05166 map05166

Pfam Domains

Protein Families

NUP50 Ran_BP1

Protein Analysis

424

Amino Acids

45.08

Weight (kDa)

4.7

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUP50	PF08911	12 - 77	8.6e-18	NUP50 (Nucleoporin 50 kDa)
Ran_BP1	PF00638	288 - 399	2e-19	RanBP1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007109)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52380 AT1G52380 AT1G52380 AT1G52380 AT3G15970 AT3G15970
fragaria_vesca	FvH4_6g31000
malus_domestica	MD09G1214400.v1.1 MD17G1196800.v1.1
prunus_persica	Prupe.3G072500_v2.0.a1
pyrus_communis	pycom09g13120 pycom09g13130 pycom17g20180 pycom17g20190
rosa_chinensis	RchiOBHm_Chr2g0137631
rosa_laevigata	RLG00000019665
rosa_multiflora	Rmu_sc0000765.1_g000029
rosa_roxburghii	Rroxscaffold_2G00106980
rosa_rugosa	Rorug02G0343600 Rorug02G0343700
rosa_samantha	Rh2AG391400 Rh2BG399000 Rh2CG378400 Rh2DG414000
rosa_wichuraiana	Rw2G032060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	301
Acc36I	ACCTGC	1 cut(s)	301
AccB1I	GGYRCC	1 cut(s)	1219
AccII	CGCG	1 cut(s)	1067
AccIII	TCCGGA	1 cut(s)	574
AciI	CCGC	2 cut(s)	5, 842
AclI	AACGTT	1 cut(s)	396
AclWI	GGATC	2 cut(s)	560, 739
AcsI	RAATTY	3 cut(s)	417, 1178, 1246
AcuI	CTGAAG	2 cut(s)	291, 1031
AfaI	GTAC	2 cut(s)	709, 816
AfiI	CCNNNNNNNGG	3 cut(s)	113, 224, 452
AgsI	TTSAA	5 cut(s)	124, 350, 687, 1150, 1156
AjnI	CCWGG	1 cut(s)	73
AluBI	AGCT	8 cut(s)	44, 275, 281, 285, 594, 607, 1063, 1229
AluI	AGCT	8 cut(s)	44, 275, 281, 285, 594, 607, 1063, 1229
Alw21I	GWGCWC	1 cut(s)	596
Alw26I	GTCTC	5 cut(s)	296, 473, 767, 860, 1000
AlwI	GGATC	2 cut(s)	560, 739
AlwNI	CAGNNNCTG	1 cut(s)	266
Ama87I	CYCGRG	2 cut(s)	63, 766
Aor13HI	TCCGGA	1 cut(s)	574
AoxI	GGCC	3 cut(s)	76, 129, 802
ApeKI	GCWGC	8 cut(s)	44, 275, 278, 331, 380, 833, 908, 1187
ApoI	RAATTY	3 cut(s)	417, 1178, 1246
ArsI	GACNNNNNNTTYG	2 cut(s)	680, 712
Asp700I	GAANNNNTTC	1 cut(s)	781
AspS9I	GGNCC	3 cut(s)	129, 696, 803
AsuC2I	CCSGG	1 cut(s)	649
AsuHPI	GGTGA	3 cut(s)	279, 467, 488
AsuNHI	GCTAGC	1 cut(s)	281
AvaI	CYCGRG	2 cut(s)	63, 766
AvaII	GGWCC	1 cut(s)	696
BanI	GGYRCC	1 cut(s)	1219
BanII	GRGCYC	1 cut(s)	596
BauI	CACGAG	1 cut(s)	306
BbsI	GAAGAC	1 cut(s)	1241
Bbv12I	GWGCWC	1 cut(s)	596
BbvI	GCAGC	8 cut(s)	31, 262, 290, 343, 392, 820, 895, 1174
BccI	CCATC	5 cut(s)	686, 821, 923, 1121, 1154
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BciT130I	CCWGG	1 cut(s)	75
BclI	TGATCA	1 cut(s)	358
BcnI	CCSGG	1 cut(s)	649
BcoDI	GTCTC	5 cut(s)	296, 473, 767, 860, 1000
BfaI	CTAG	2 cut(s)	282, 663
BfmI	CTRYAG	3 cut(s)	276, 378, 1224
BfuAI	ACCTGC	1 cut(s)	301
BglII	AGATCT	1 cut(s)	958
BisI	GCNGC	8 cut(s)	45, 276, 279, 332, 381, 834, 909, 1188
BlsI	GCNGC	8 cut(s)	46, 277, 280, 333, 382, 835, 910, 1189
Bme1390I	CCNGG	2 cut(s)	75, 649
Bme18I	GGWCC	1 cut(s)	696
BmeT110I	CYCGRG	2 cut(s)	63, 766
BmgT120I	GGNCC	3 cut(s)	129, 696, 803
BmiI	GGNNCC	7 cut(s)	240, 438, 646, 697, 805, 1165, 1221
BmrFI	CCNGG	2 cut(s)	75, 649
BmrI	ACTGGG	1 cut(s)	879
BmsI	GCATC	4 cut(s)	85, 895, 1119, 1268
BmtI	GCTAGC	1 cut(s)	285
BmuI	ACTGGG	1 cut(s)	879
BpiI	GAAGAC	1 cut(s)	1241
BpmI	CTGGAG	1 cut(s)	1224
BpuMI	CCSGG	1 cut(s)	649
Bsa29I	ATCGAT	1 cut(s)	1113
BsaI	GGTCTC	1 cut(s)	767
BsaJI	CCNNGG	2 cut(s)	73, 1254
BsaWI	WCCGGW	1 cut(s)	574
Bsc4I	CCNNNNNNNGG	3 cut(s)	113, 224, 452
Bse1I	ACTGG	4 cut(s)	132, 423, 715, 874
BseAI	TCCGGA	1 cut(s)	574
BseBI	CCWGG	1 cut(s)	75
BseCI	ATCGAT	1 cut(s)	1113
BseDI	CCNNGG	2 cut(s)	73, 1254
BseGI	GGATG	4 cut(s)	376, 697, 1132, 1165
BseLI	CCNNNNNNNGG	3 cut(s)	113, 224, 452
BseMII	CTCAG	1 cut(s)	975
BseNI	ACTGG	4 cut(s)	132, 423, 715, 874
BseRI	GAGGAG	1 cut(s)	152
BseXI	GCAGC	8 cut(s)	31, 262, 290, 343, 392, 820, 895, 1174
BseYI	CCCAGC	1 cut(s)	47
Bsh1236I	CGCG	1 cut(s)	1067
BshFI	GGCC	3 cut(s)	78, 131, 804
BshNI	GGYRCC	1 cut(s)	1219
BshVI	ATCGAT	1 cut(s)	1113
BsiHKAI	GWGCWC	1 cut(s)	596
BsiHKCI	CYCGRG	2 cut(s)	63, 766
BsiSI	CCGG	2 cut(s)	575, 648
BslI	CCNNNNNNNGG	3 cut(s)	113, 224, 452
BsmAI	GTCTC	5 cut(s)	296, 473, 767, 860, 1000
BsmBI	CGTCTC	1 cut(s)	473
BsmI	GAATGC	1 cut(s)	1042
BsnI	GGCC	3 cut(s)	78, 131, 804
Bso31I	GGTCTC	1 cut(s)	767
BsoBI	CYCGRG	2 cut(s)	63, 766
Bsp1286I	GDGCHC	1 cut(s)	596
Bsp13I	TCCGGA	1 cut(s)	574
Bsp143I	GATC	4 cut(s)	358, 565, 731, 958
Bsp68I	TCGCGA	1 cut(s)	1067
BspACI	CCGC	2 cut(s)	5, 842
BspANI	GGCC	3 cut(s)	78, 131, 804
BspCNI	CTCAG	1 cut(s)	976
BspDI	ATCGAT	1 cut(s)	1113
BspEI	TCCGGA	1 cut(s)	574
BspFNI	CGCG	1 cut(s)	1067
BspLI	GGNNCC	7 cut(s)	240, 438, 646, 697, 805, 1165, 1221
BspMAI	CTGCAG	2 cut(s)	280, 382
BspMI	ACCTGC	1 cut(s)	301
BspOI	GCTAGC	1 cut(s)	285
BspPI	GGATC	2 cut(s)	560, 739
BspQI	GCTCTTC	1 cut(s)	27
BspT107I	GGYRCC	1 cut(s)	1219
BspTNI	GGTCTC	1 cut(s)	767
BsrI	ACTGG	4 cut(s)	132, 423, 715, 874
BssECI	CCNNGG	2 cut(s)	73, 1254
BssMI	GATC	4 cut(s)	358, 565, 731, 958
BssSI	CACGAG	1 cut(s)	306
BssT1I	CCWWGG	1 cut(s)	1254
Bst2BI	CACGAG	1 cut(s)	306
Bst2UI	CCWGG	1 cut(s)	75
Bst4CI	ACNGT	1 cut(s)	484
Bst6I	CTCTTC	2 cut(s)	27, 489
BstC8I	GCNNGC	8 cut(s)	42, 147, 179, 226, 283, 1042, 1065, 1099
BstDEI	CTNAG	2 cut(s)	819, 984
BstF5I	GGATG	4 cut(s)	376, 697, 1132, 1165
BstFNI	CGCG	1 cut(s)	1067
BstKTI	GATC	4 cut(s)	361, 568, 734, 961
BstMAI	GTCTC	5 cut(s)	296, 473, 767, 860, 1000
BstMBI	GATC	4 cut(s)	358, 565, 731, 958
BstMWI	GCNNNNNNNGC	7 cut(s)	200, 275, 801, 908, 1107, 1196, 1226
BstNI	CCWGG	1 cut(s)	75
BstSCI	CCNGG	2 cut(s)	73, 647
BstSFI	CTRYAG	3 cut(s)	276, 378, 1224
BstUI	CGCG	1 cut(s)	1067
BstV1I	GCAGC	8 cut(s)	31, 262, 290, 343, 392, 820, 895, 1174
BstV2I	GAAGAC	1 cut(s)	1241
BstX2I	RGATCY	2 cut(s)	565, 958
BstYI	RGATCY	2 cut(s)	565, 958
Bsu15I	ATCGAT	1 cut(s)	1113
BsuRI	GGCC	3 cut(s)	78, 131, 804
BsuTUI	ATCGAT	1 cut(s)	1113
BtsCI	GGATG	4 cut(s)	376, 697, 1132, 1165
BtsI	GCAGTG	2 cut(s)	198, 897
BtsIMutI	CAGTG	4 cut(s)	139, 198, 430, 897
BtuMI	TCGCGA	1 cut(s)	1067
BveI	ACCTGC	1 cut(s)	301
Cac8I	GCNNGC	8 cut(s)	42, 147, 179, 226, 283, 1042, 1065, 1099
CaiI	CAGNNNCTG	1 cut(s)	266
Cfr13I	GGNCC	3 cut(s)	129, 696, 803
ClaI	ATCGAT	1 cut(s)	1113
Csp6I	GTAC	2 cut(s)	708, 815
CviAII	CATG	3 cut(s)	1057, 1072, 1102
CviQI	GTAC	2 cut(s)	708, 815
DdeI	CTNAG	2 cut(s)	819, 984
DpnI	GATC	4 cut(s)	360, 567, 733, 960
DpnII	GATC	4 cut(s)	358, 565, 731, 958
Eam1104I	CTCTTC	2 cut(s)	27, 489
EarI	CTCTTC	2 cut(s)	27, 489
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	594
Eco130I	CCWWGG	1 cut(s)	1254
Eco147I	AGGCCT	1 cut(s)	78
Eco24I	GRGCYC	1 cut(s)	596
Eco31I	GGTCTC	1 cut(s)	767
Eco47I	GGWCC	1 cut(s)	696
Eco53kI	GAGCTC	1 cut(s)	594
Eco57I	CTGAAG	2 cut(s)	291, 1031
Eco88I	CYCGRG	2 cut(s)	63, 766
EcoICRI	GAGCTC	1 cut(s)	594
EcoO109I	RGGNCCY	1 cut(s)	803
EcoRII	CCWGG	1 cut(s)	73
EcoT14I	CCWWGG	1 cut(s)	1254
EcoT38I	GRGCYC	1 cut(s)	596
ErhI	CCWWGG	1 cut(s)	1254
Esp3I	CGTCTC	1 cut(s)	473
FaeI	CATG	3 cut(s)	1060, 1075, 1105
FaiI	YATR	7 cut(s)	230, 1004, 1058, 1073, 1103, 1203, 1232
FalI	AAGNNNNNCTT	2 cut(s)	981, 1013
FatI	CATG	3 cut(s)	1056, 1071, 1101
FauI	CCCGC	1 cut(s)	849
FbaI	TGATCA	1 cut(s)	358
Fnu4HI	GCNGC	8 cut(s)	45, 276, 279, 332, 381, 834, 909, 1188
FokI	GGATG	4 cut(s)	383, 704, 1139, 1172
FriOI	GRGCYC	1 cut(s)	596
Fsp4HI	GCNGC	8 cut(s)	45, 276, 279, 332, 381, 834, 909, 1188
FspBI	CTAG	2 cut(s)	282, 663
GluI	GCNGC	8 cut(s)	45, 276, 279, 332, 381, 834, 909, 1188
GsaI	CCCAGC	1 cut(s)	51
GsuI	CTGGAG	1 cut(s)	1224
HaeIII	GGCC	3 cut(s)	78, 131, 804
HapII	CCGG	2 cut(s)	575, 648
Hin1II	CATG	3 cut(s)	1060, 1075, 1105
HinfI	GANTC	3 cut(s)	374, 980, 1237
HpaII	CCGG	2 cut(s)	575, 648
HphI	GGTGA	3 cut(s)	279, 467, 488
Hpy166II	GTNNAC	2 cut(s)	699, 722
Hpy188I	TCNGA	7 cut(s)	103, 316, 963, 979, 985, 1035, 1264
Hpy188III	TCNNGA	7 cut(s)	65, 124, 575, 642, 766, 1066, 1241
Hpy8I	GTNNAC	2 cut(s)	699, 722
Hpy99I	CGWCG	1 cut(s)	177
HpyAV	CCTTC	8 cut(s)	397, 572, 637, 759, 847, 934, 1006, 1117
HpyCH4III	ACNGT	1 cut(s)	484
HpyCH4IV	ACGT	2 cut(s)	396, 946
HpyCH4V	TGCA	6 cut(s)	278, 380, 850, 860, 1040, 1101
HpyF10VI	GCNNNNNNNGC	7 cut(s)	200, 275, 801, 908, 1107, 1196, 1226
HpyF3I	CTNAG	2 cut(s)	819, 984
HpySE526I	ACGT	2 cut(s)	396, 946
Hsp92II	CATG	3 cut(s)	1060, 1075, 1105
Kpn2I	TCCGGA	1 cut(s)	574
Ksp22I	TGATCA	1 cut(s)	358
Kzo9I	GATC	4 cut(s)	358, 565, 731, 958
LguI	GCTCTTC	1 cut(s)	27
Lsp1109I	GCAGC	8 cut(s)	31, 262, 290, 343, 392, 820, 895, 1174
LweI	GCATC	4 cut(s)	85, 895, 1119, 1268
MaeI	CTAG	2 cut(s)	282, 663
MaeII	ACGT	2 cut(s)	396, 946
MaeIII	GTNAC	3 cut(s)	581, 1087, 1192
MalI	GATC	4 cut(s)	360, 567, 733, 960
MboI	GATC	4 cut(s)	358, 565, 731, 958
MboII	GAAGA	9 cut(s)	14, 168, 263, 506, 545, 774, 887, 1090, 1246
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	2 cut(s)	565, 958
MhlI	GDGCHC	1 cut(s)	596
MluCI	AATT	8 cut(s)	159, 417, 510, 810, 1017, 1029, 1178, 1246
MlyI	GAGTC	2 cut(s)	368, 1231
MmeI	TCCRAC	2 cut(s)	269, 625
MroI	TCCGGA	1 cut(s)	574
MroXI	GAANNNNTTC	1 cut(s)	781
MseI	TTAA	4 cut(s)	30, 165, 513, 969
MspI	CCGG	2 cut(s)	575, 648
MspR9I	CCNGG	2 cut(s)	75, 649
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	1 cut(s)	1042
MvaI	CCWGG	1 cut(s)	75
MvnI	CGCG	1 cut(s)	1067
MwoI	GCNNNNNNNGC	7 cut(s)	200, 275, 801, 908, 1107, 1196, 1226
NciI	CCSGG	1 cut(s)	649
NdeII	GATC	4 cut(s)	358, 565, 731, 958
NheI	GCTAGC	1 cut(s)	281
NlaIII	CATG	3 cut(s)	1060, 1075, 1105
NlaIV	GGNNCC	7 cut(s)	240, 438, 646, 697, 805, 1165, 1221
NruI	TCGCGA	1 cut(s)	1067
PaeR7I	CTCGAG	1 cut(s)	766
PaqCI	CACCTGC	1 cut(s)	301
PceI	AGGCCT	1 cut(s)	78
PciSI	GCTCTTC	1 cut(s)	27
PctI	GAATGC	1 cut(s)	1042
PdmI	GAANNNNTTC	1 cut(s)	781
PfeI	GAWTC	1 cut(s)	980
PkrI	GCNGC	8 cut(s)	46, 277, 280, 333, 382, 835, 910, 1189
PleI	GAGTC	2 cut(s)	368, 1231
PpsI	GAGTC	2 cut(s)	368, 1231
Psp124BI	GAGCTC	1 cut(s)	596
Psp1406I	AACGTT	1 cut(s)	396
Psp6I	CCWGG	1 cut(s)	73
PspFI	CCCAGC	1 cut(s)	47
PspGI	CCWGG	1 cut(s)	73
PspN4I	GGNNCC	7 cut(s)	240, 438, 646, 697, 805, 1165, 1221
PspPI	GGNCC	3 cut(s)	129, 696, 803
PsrI	GAACNNNNNNTAC	2 cut(s)	763, 795
PstI	CTGCAG	2 cut(s)	280, 382
PstNI	CAGNNNCTG	1 cut(s)	266
PsuI	RGATCY	2 cut(s)	565, 958
RruI	TCGCGA	1 cut(s)	1067
RsaI	GTAC	2 cut(s)	709, 816
RsaNI	GTAC	2 cut(s)	708, 815
SacI	GAGCTC	1 cut(s)	596
SapI	GCTCTTC	1 cut(s)	27
SaqAI	TTAA	4 cut(s)	30, 165, 513, 969
SatI	GCNGC	8 cut(s)	45, 276, 279, 332, 381, 834, 909, 1188
Sau3AI	GATC	4 cut(s)	358, 565, 731, 958
Sau96I	GGNCC	3 cut(s)	129, 696, 803
SchI	GAGTC	2 cut(s)	368, 1231
ScrFI	CCNGG	2 cut(s)	75, 649
SduI	GDGCHC	1 cut(s)	596
SfaNI	GCATC	4 cut(s)	85, 895, 1119, 1268
SfcI	CTRYAG	3 cut(s)	276, 378, 1224
Sfr274I	CTCGAG	1 cut(s)	766
SinI	GGWCC	1 cut(s)	696
SlaI	CTCGAG	1 cut(s)	766
SmlI	CTYRAG	1 cut(s)	766
SmoI	CTYRAG	1 cut(s)	766
Sse9I	AATT	8 cut(s)	159, 417, 510, 810, 1017, 1029, 1178, 1246
SseBI	AGGCCT	1 cut(s)	78
SsiI	CCGC	2 cut(s)	5, 842
SspI	AATATT	1 cut(s)	739
SspMI	CTAG	2 cut(s)	282, 663
SstI	GAGCTC	1 cut(s)	596
StuI	AGGCCT	1 cut(s)	78
StyD4I	CCNGG	2 cut(s)	73, 647
StyI	CCWWGG	1 cut(s)	1254
TaaI	ACNGT	1 cut(s)	484
TaiI	ACGT	2 cut(s)	399, 949
TaqI	TCGA	4 cut(s)	611, 767, 1113, 1173
TasI	AATT	8 cut(s)	159, 417, 510, 810, 1017, 1029, 1178, 1246
TfiI	GAWTC	1 cut(s)	980
Tru1I	TTAA	4 cut(s)	30, 165, 513, 969
Tru9I	TTAA	4 cut(s)	30, 165, 513, 969
TscAI	CASTG	4 cut(s)	139, 205, 430, 904
TseI	GCWGC	8 cut(s)	44, 275, 278, 331, 380, 833, 908, 1187
TspDTI	ATGAA	7 cut(s)	429, 546, 660, 1073, 1118, 1131, 1247
TspGWI	ACGGA	2 cut(s)	449, 1156
TspRI	CASTG	4 cut(s)	139, 205, 430, 904
VpaK11BI	GGWCC	1 cut(s)	696
XapI	RAATTY	3 cut(s)	417, 1178, 1246
XhoI	CTCGAG	1 cut(s)	766
XmnI	GAANNNNTTC	1 cut(s)	781
XspI	CTAG	2 cut(s)	282, 663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.