Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013399

Physical Location & Seq

Genomic Coordinates Reverse (-)

25632706 .. 25635325

Gene Structure 2620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g32590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGAGACACCGCCGCCACCTGAGACTCATCCTCACCATCCCCACGCACCGCCACTACGCCACAAAATACACCGCCAAAGTAACCTCCACCTCCCCAACCGGCCGCACCCTCTCCGTCGAGGTCACCCCTCCTCCTCCTCTCCCCACCGACATCCGCGGCTACACTCTCACCCGCCGCGACCTCGTCTGCAAAGCCACCCAAATCATCCTCCACCAATCCCGCTCCGCCACGTCAGACCCCTTCCTCGACCTCGCTGACTACCTCTCCTCCCTCTCCGTCTCCCTCACCCCCGCCGAGGCCTCCGAGATTCTCAAGTCCCTCAACGACGCCGACCTCGCCTTGAAATTCTTCCGATTCTGCCCCTCCCTCTCCCCGAAATTCCAGCACGACGCCTTCACCTGCAACCGCATCCTCCTCATCCTCTCCAAGTCCGCCGCCCCCGCGCGGTTCGACCTCGCCCGCTCGATCGTCTCCGATATGCACCGCTCCAATATACGCGGCAACATCTCCACCGTCAATCTCCTCATCGGCCTCTTCGGCAGCAGCGATGATCTCGAAACAACCATGGAGCTGGTGAAGAAATGGAGCCTTAAAATGAACTCTTACACATACAAATGTCTGGTTCAGGCCTTCTTGCGCTCTTACGATACGGCGAAAGCCTTCCAGTGCTACATGGAATTGCGGCGGCATGGCTACAAGTTGGACATTTATTGTTACAATATGCTGCTTCATGCGATGGCGAAAGACGAAAAGGTTGAGCAGGCGTACAAGGTGTTTGAAGATATGAAGAAGAAGCATTGCGAGCCGGATGAGTTTACATACACGATCATGATCAGAATGAGTGGGAAATTGGGTAAAGGGGAAGAGTCTCTGGTGTTTTTTCAGGAGTTGTTGGACAAAGGTTGTAATTTGAATTTGATTGTTTATAATACCATCATTCAGGCTCTTGCGAGGAGCAACATGGTTGATAAGGCCATACTTGTGTTCATGAAAATGGTGGAAGCCAATTGTAGGCCGAACGAGTTTACGTACAGTGTGATTTTGAATCTTTTGATTGCACAAGGGCAGCTTAGTAGGTTAGATGAGTTGGTGGAGGTGTCAAAGAGATATGTGACTAAGTCTATATATGCGTATCTTGTTAAGACGTTGAGCAAATTGGGTCATGATGATGAAGCCCACCGGCTATTCTGCAACATGTGGAAGTTCCATGACAAGGGGGATCGAGATGCTTACATGTCGATGTTAGAGAGTTTGTGTGCTGCAGGTAAAACCGCAGAGGCCGTTGATTTGCTGAGCAACATTCATGAGAAAGGGGTATCCACTGACACTATGATGTATAACACAGTATTAGCGGCGCTTGGGAAGTCGAAGCAAGTATCACATCTTCATGAAGTGTATGAAAAGATGAAAACCGATGGCCCTGAACCAGATATATTTACCTACAACATTGTGATTTCCGGCTTTGGTAGGGCTGGGAAGGTTGATGAGGCGATGACAGTATTCGAACAGCTTGAGAACAGTGATTGTAAACCCGATATTGTGTCTTACAATTCATTGATCAATTGCCTTGGGAAGAATGGTGATGTGGATGAAGCCCACATGAGGTTTAAGGAGATGCAGGAAAAAGGGTTCAGCCCTGATGTTGTCACCTACAGCACTCTAATAGAGTGCTTTGGCAAGACGGATAGGGTTGAAATGGCATGCAGATTGTTTGATGACATGCTTGCTCGAGGCTGCTGTCCCAACATTGTGACATACAACATCCTGCTTGATTGTCTTGAAAGGTGTGGGAGGACTGCCGAGGCAGTGGATTTGTATGCAAAACTTAAGCAGCAGGGCTTGACGCCCGATTGGATTACATATGCAGTGCTTGAACGACTGCAAAGTGGTTCTCATAAGAAATTCAGAGTCCGCAGGCAGAGTCCAATGACAGGTTGGGTTGTTAGCCCTATAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

653

Amino Acids

74.14

Weight (kDa)

8.44

Isoelectric Point (pI)

41.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	190 - 296	3.2e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	200 - 248	3e-07	PPR repeat family
PPR_long	PF17177	204 - 373	1.9e-16	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	226 - 283	3.5e-12	Pentatricopeptide repeat domain
TPR_24	PF23276	227 - 326	3.6e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	231 - 263	2.6e-06	PPR repeat
PPR_2	PF13041	235 - 280	3.1e-17	PPR repeat family
PPR_3	PF13812	294 - 350	1.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	300 - 333	9e-07	PPR repeat
PPR_2	PF13041	305 - 350	6.2e-13	PPR repeat family
PPR	PF01535	308 - 337	9.3e-06	PPR repeat
TPR_24	PF23276	411 - 503	4.5e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	430 - 489	1.7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	442 - 489	2.7e-11	PPR repeat family
PPR_1	PF12854	473 - 504	2.7e-11	PPR repeat
PPR_2	PF13041	476 - 523	2.3e-14	PPR repeat family
PPR	PF01535	479 - 509	3.4e-07	PPR repeat
PPR_3	PF13812	486 - 526	1e-05	Pentatricopeptide repeat domain
TPR_24	PF23276	489 - 608	1.9e-09	Fungal tetratrico peptide repeats
PPR_long	PF17177	494 - 626	2e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	500 - 560	6.1e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	508 - 539	7.1e-10	PPR repeat
PPR_2	PF13041	511 - 559	7.3e-18	PPR repeat family
PPR	PF01535	514 - 544	2.6e-09	PPR repeat
PPR_3	PF13812	536 - 591	6.4e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	542 - 574	4.7e-09	PPR repeat
PPR_2	PF13041	546 - 593	5.3e-17	PPR repeat family
PPR	PF01535	549 - 579	9.5e-07	PPR repeat
PPR_3	PF13812	569 - 624	2.9e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	577 - 605	3.6e-07	PPR repeat
PPR_2	PF13041	581 - 624	3.5e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51965
fragaria_vesca	FvH4_6g32590
malus_domestica	MD09G1200200.v1.1
prunus_persica	Prupe.3G056800_v2.0.a1
pyrus_communis	pycom09g11780 pycom15g36760
rosa_chinensis	RchiOBHm_Chr2g0141041
rosa_laevigata	RLG00000019910
rosa_multiflora	Rmu_sc0004769.1_g000016 Rmu_sc0012897.1_g000006
rosa_roxburghii	Rroxscaffold_2G00104260
rosa_rugosa	Rorug02G0366300
rosa_samantha	Rh2AG417700 Rh2BG427600 Rh2CG404000 Rh2DG437100
rosa_wichuraiana	Rw2G034190 Rw2G034250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	927
AarI	CACCTGC	1 cut(s)	407
Acc36I	ACCTGC	2 cut(s)	407, 1253
AccBSI	CCGCTC	3 cut(s)	222, 462, 486
AccII	CGCG	5 cut(s)	156, 177, 443, 445, 498
AclWI	GGATC	1 cut(s)	1227
AcoI	YGGCCR	1 cut(s)	100
AcsI	RAATTY	4 cut(s)	344, 377, 913, 1901
AcyI	GRCGYC	3 cut(s)	327, 390, 1844
AfaI	GTAC	2 cut(s)	767, 1031
AfiI	CCNNNNNNNGG	6 cut(s)	295, 444, 1011, 1213, 1602, 1931
AflII	CTTAAG	1 cut(s)	1826
AflIII	ACRYGT	2 cut(s)	1194, 1233
AgsI	TTSAA	7 cut(s)	343, 779, 913, 1045, 1694, 1781, 1874
AjiI	CACGTC	1 cut(s)	231
AloI	GAACNNNNNNTCC	2 cut(s)	1613, 1645
AluBI	AGCT	3 cut(s)	571, 1069, 1510
AluI	AGCT	3 cut(s)	571, 1069, 1510
Alw26I	GTCTC	4 cut(s)	16, 283, 475, 873
AlwI	GGATC	1 cut(s)	1227
Ama87I	CYCGRG	1 cut(s)	1728
AoxI	GGCC	8 cut(s)	100, 297, 529, 627, 972, 1013, 1278, 1417
ApeKI	GCWGC	7 cut(s)	540, 543, 724, 1066, 1259, 1734, 1831
ApoI	RAATTY	4 cut(s)	344, 377, 913, 1901
Asp700I	GAANNNNTTC	2 cut(s)	347, 659
AspLEI	GCGC	3 cut(s)	445, 639, 1357
AspS9I	GGNCC	1 cut(s)	1418
AsuHPI	GGTGA	8 cut(s)	25, 115, 160, 277, 388, 586, 1592, 1639
AsuII	TTCGAA	1 cut(s)	1503
AvaI	CYCGRG	1 cut(s)	1728
BarI	GAAGNNNNNNTAC	2 cut(s)	1368, 1400
BbvI	GCAGC	7 cut(s)	552, 555, 711, 1078, 1246, 1721, 1843
BccI	CCATC	4 cut(s)	44, 730, 941, 1409
BceAI	ACGGC	2 cut(s)	666, 1265
BciVI	GTATCC	1 cut(s)	1327
BclI	TGATCA	2 cut(s)	831, 1557
BcoDI	GTCTC	4 cut(s)	16, 283, 475, 873
BfmI	CTRYAG	2 cut(s)	1260, 1651
BfoI	RGCGCY	1 cut(s)	1358
BfrI	CTTAAG	1 cut(s)	1826
BfuAI	ACCTGC	2 cut(s)	407, 1253
BfuI	GTATCC	1 cut(s)	1327
BglI	GCCNNNNNGGC	1 cut(s)	537
BlpI	GCTNAGC	1 cut(s)	1292
BmeT110I	CYCGRG	1 cut(s)	1728
BmgBI	CACGTC	1 cut(s)	231
BmgT120I	GGNCC	1 cut(s)	1418
BmiI	GGNNCC	1 cut(s)	587
BmsI	GCATC	3 cut(s)	417, 1216, 1605
Bpu1102I	GCTNAGC	1 cut(s)	1292
Bpu14I	TTCGAA	1 cut(s)	1503
BpuEI	CTTGAG	2 cut(s)	296, 1532
BsaAI	YACGTR	1 cut(s)	1029
BsaBI	GATNNNNATC	1 cut(s)	830
BsaHI	GRCGYC	3 cut(s)	327, 390, 1844
BsaJI	CCNNGG	5 cut(s)	154, 294, 564, 1567, 1800
BsaXI	ACNNNNNCTCC	6 cut(s)	115, 145, 248, 251, 278, 281
Bsc4I	CCNNNNNNNGG	6 cut(s)	295, 444, 1011, 1213, 1602, 1931
Bse118I	RCCGGY	2 cut(s)	98, 1179
Bse1I	ACTGG	1 cut(s)	664
Bse3DI	GCAATG	1 cut(s)	796
Bse8I	GATNNNNATC	1 cut(s)	830
BseDI	CCNNGG	5 cut(s)	154, 294, 564, 1567, 1800
BseGI	GGATG	9 cut(s)	27, 36, 150, 204, 408, 417, 814, 1594, 1761
BseJI	GATNNNNATC	1 cut(s)	830
BseLI	CCNNNNNNNGG	6 cut(s)	295, 444, 1011, 1213, 1602, 1931
BseMI	GCAATG	1 cut(s)	796
BseMII	CTCAG	2 cut(s)	11, 1283
BseNI	ACTGG	1 cut(s)	664
BseRI	GAGGAG	7 cut(s)	120, 123, 126, 256, 404, 512, 967
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	7 cut(s)	552, 555, 711, 1078, 1246, 1721, 1843
BseYI	CCCAGC	1 cut(s)	1472
Bsh1236I	CGCG	5 cut(s)	156, 177, 443, 445, 498
Bsh1285I	CGRYCG	2 cut(s)	103, 468
BshFI	GGCC	8 cut(s)	102, 299, 531, 629, 974, 1015, 1280, 1419
BsiEI	CGRYCG	2 cut(s)	103, 468
BsiHKCI	CYCGRG	1 cut(s)	1728
BsiSI	CCGG	4 cut(s)	99, 806, 1180, 1458
BslFI	GGGAC	2 cut(s)	301, 1725
BslI	CCNNNNNNNGG	6 cut(s)	295, 444, 1011, 1213, 1602, 1931
BsmAI	GTCTC	4 cut(s)	16, 283, 475, 873
BsmBI	CGTCTC	2 cut(s)	283, 475
BsmFI	GGGAC	2 cut(s)	301, 1725
BsnI	GGCC	8 cut(s)	102, 299, 531, 629, 974, 1015, 1280, 1419
BsoBI	CYCGRG	1 cut(s)	1728
Bsp119I	TTCGAA	1 cut(s)	1503
Bsp143I	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
Bsp1720I	GCTNAGC	1 cut(s)	1292
Bsp19I	CCATGG	1 cut(s)	564
BspANI	GGCC	8 cut(s)	102, 299, 531, 629, 974, 1015, 1280, 1419
BspCNI	CTCAG	2 cut(s)	12, 1284
BspFNI	CGCG	5 cut(s)	156, 177, 443, 445, 498
BspHI	TCATGA	5 cut(s)	828, 987, 1162, 1303, 1387
BspLI	GGNNCC	1 cut(s)	587
BspMAI	CTGCAG	1 cut(s)	1264
BspMI	ACCTGC	2 cut(s)	407, 1253
BspPI	GGATC	1 cut(s)	1227
BspT104I	TTCGAA	1 cut(s)	1503
BspTI	CTTAAG	1 cut(s)	1826
BsrBI	CCGCTC	3 cut(s)	222, 462, 486
BsrDI	GCAATG	1 cut(s)	796
BsrFI	RCCGGY	2 cut(s)	98, 1179
BsrI	ACTGG	1 cut(s)	664
BssAI	RCCGGY	2 cut(s)	98, 1179
BssECI	CCNNGG	5 cut(s)	154, 294, 564, 1567, 1800
BssMI	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
BssNI	GRCGYC	3 cut(s)	327, 390, 1844
BssT1I	CCWWGG	2 cut(s)	564, 1567
Bst4CI	ACNGT	5 cut(s)	514, 1034, 1345, 1498, 1520
Bst6I	CTCTTC	2 cut(s)	539, 858
BstACI	GRCGYC	3 cut(s)	327, 390, 1844
BstAFI	CTTAAG	1 cut(s)	1826
BstBAI	YACGTR	1 cut(s)	1029
BstBI	TTCGAA	1 cut(s)	1503
BstC8I	GCNNGC	6 cut(s)	460, 762, 803, 1702, 1725, 1916
BstDEI	CTNAG	4 cut(s)	20, 1070, 1116, 1292
BstDSI	CCRYGG	2 cut(s)	154, 564
BstEII	GGTNACC	1 cut(s)	121
BstF5I	GGATG	9 cut(s)	27, 36, 150, 204, 408, 417, 814, 1594, 1761
BstFNI	CGCG	5 cut(s)	156, 177, 443, 445, 498
BstH2I	RGCGCY	1 cut(s)	1358
BstHHI	GCGC	3 cut(s)	445, 639, 1357
BstKTI	GATC	6 cut(s)	468, 553, 828, 834, 1222, 1560
BstMAI	GTCTC	4 cut(s)	16, 283, 475, 873
BstMBI	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
BstMCI	CGRYCG	2 cut(s)	103, 468
BstMWI	GCNNNNNNNGC	4 cut(s)	335, 440, 537, 802
BstNSI	RCATGY	4 cut(s)	1198, 1237, 1704, 1723
BstPI	GGTNACC	1 cut(s)	121
BstSFI	CTRYAG	2 cut(s)	1260, 1651
BstSNI	TACGTA	1 cut(s)	1029
BstUI	CGCG	5 cut(s)	156, 177, 443, 445, 498
BstV1I	GCAGC	7 cut(s)	552, 555, 711, 1078, 1246, 1721, 1843
BstXI	CCANNNNNNTGG	1 cut(s)	571
BstZI	CGGCCG	1 cut(s)	100
BsuI	GTATCC	1 cut(s)	1327
BsuRI	GGCC	8 cut(s)	102, 299, 531, 629, 974, 1015, 1280, 1419
BtgI	CCRYGG	2 cut(s)	154, 564
BtgZI	GCGATG	3 cut(s)	561, 749, 1505
BtrI	CACGTC	1 cut(s)	231
BtsCI	GGATG	9 cut(s)	27, 36, 150, 204, 408, 417, 814, 1594, 1761
BtsI	GCAGTG	2 cut(s)	1812, 1872
BtsIMutI	CAGTG	6 cut(s)	671, 1039, 1320, 1525, 1812, 1872
BveI	ACCTGC	2 cut(s)	407, 1253
Cac8I	GCNNGC	6 cut(s)	460, 762, 803, 1702, 1725, 1916
CciI	TCATGA	5 cut(s)	828, 987, 1162, 1303, 1387
CfoI	GCGC	3 cut(s)	445, 639, 1357
Cfr10I	RCCGGY	2 cut(s)	98, 1179
Cfr13I	GGNCC	1 cut(s)	1418
Cfr42I	CCGCGG	1 cut(s)	157
CseI	GACGC	3 cut(s)	335, 398, 1852
Csp6I	GTAC	2 cut(s)	766, 1030
CviQI	GTAC	2 cut(s)	766, 1030
DdeI	CTNAG	4 cut(s)	20, 1070, 1116, 1292
DpnI	GATC	6 cut(s)	467, 552, 827, 833, 1221, 1559
DpnII	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
EaeI	YGGCCR	1 cut(s)	100
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	2 cut(s)	539, 858
EarI	CTCTTC	2 cut(s)	539, 858
EciI	GGCGGA	2 cut(s)	214, 421
EclXI	CGGCCG	1 cut(s)	100
Eco105I	TACGTA	1 cut(s)	1029
Eco130I	CCWWGG	2 cut(s)	564, 1567
Eco147I	AGGCCT	2 cut(s)	299, 629
Eco52I	CGGCCG	1 cut(s)	100
Eco88I	CYCGRG	1 cut(s)	1728
Eco91I	GGTNACC	1 cut(s)	121
EcoO65I	GGTNACC	1 cut(s)	121
EcoT14I	CCWWGG	2 cut(s)	564, 1567
ErhI	CCWWGG	2 cut(s)	564, 1567
Esp3I	CGTCTC	2 cut(s)	283, 475
FalI	AAGNNNNNCTT	2 cut(s)	1053, 1085
FaqI	GGGAC	2 cut(s)	301, 1725
FauI	CCCGC	5 cut(s)	179, 227, 298, 448, 467
FauNDI	CATATG	1 cut(s)	1861
FbaI	TGATCA	2 cut(s)	831, 1557
FokI	GGATG	9 cut(s)	14, 23, 137, 191, 395, 404, 821, 1601, 1748
GlaI	GCGC	3 cut(s)	444, 638, 1356
GsaI	CCCAGC	1 cut(s)	1476
HaeII	RGCGCY	1 cut(s)	1358
HaeIII	GGCC	8 cut(s)	102, 299, 531, 629, 974, 1015, 1280, 1419
HapII	CCGG	4 cut(s)	99, 806, 1180, 1458
HgaI	GACGC	3 cut(s)	335, 398, 1852
HhaI	GCGC	3 cut(s)	445, 639, 1357
Hin1I	GRCGYC	3 cut(s)	327, 390, 1844
Hin6I	GCGC	3 cut(s)	443, 637, 1355
HinP1I	GCGC	3 cut(s)	443, 637, 1355
HinfI	GANTC	7 cut(s)	24, 307, 354, 866, 1045, 1908, 1921
HpaII	CCGG	4 cut(s)	99, 806, 1180, 1458
HphI	GGTGA	8 cut(s)	25, 115, 160, 277, 388, 586, 1592, 1639
Hpy166II	GTNNAC	3 cut(s)	816, 1026, 1529
Hpy188I	TCNGA	6 cut(s)	235, 304, 353, 475, 836, 1907
Hpy188III	TCNNGA	9 cut(s)	554, 829, 884, 988, 1163, 1223, 1304, 1388, 1778
Hpy8I	GTNNAC	3 cut(s)	816, 1026, 1529
Hpy99I	CGWCG	3 cut(s)	119, 329, 392
HpyAV	CCTTC	5 cut(s)	250, 403, 640, 670, 1471
HpyCH4III	ACNGT	5 cut(s)	514, 1034, 1345, 1498, 1520
HpyCH4IV	ACGT	3 cut(s)	230, 1028, 1145
HpyF10VI	GCNNNNNNNGC	4 cut(s)	335, 440, 537, 802
HpyF3I	CTNAG	4 cut(s)	20, 1070, 1116, 1292
HpySE526I	ACGT	3 cut(s)	230, 1028, 1145
Hsp92I	GRCGYC	3 cut(s)	327, 390, 1844
HspAI	GCGC	3 cut(s)	443, 637, 1355
Ksp22I	TGATCA	2 cut(s)	831, 1557
KspI	CCGCGG	1 cut(s)	157
Kzo9I	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
LmnI	GCTCC	5 cut(s)	227, 491, 568, 585, 954
Lsp1109I	GCAGC	7 cut(s)	552, 555, 711, 1078, 1246, 1721, 1843
LweI	GCATC	3 cut(s)	417, 1216, 1605
MaeII	ACGT	3 cut(s)	230, 1028, 1145
MaeIII	GTNAC	6 cut(s)	79, 121, 713, 1111, 1645, 1750
MalI	GATC	6 cut(s)	467, 552, 827, 833, 1221, 1559
MbiI	CCGCTC	3 cut(s)	222, 462, 486
MboI	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
MboII	GAAGA	9 cut(s)	340, 526, 589, 791, 799, 802, 875, 1376, 1585
MfeI	CAATTG	2 cut(s)	1006, 1561
MlyI	GAGTC	4 cut(s)	18, 875, 1917, 1930
MmeI	TCCRAC	2 cut(s)	681, 873
MroXI	GAANNNNTTC	2 cut(s)	347, 659
MseI	TTAA	4 cut(s)	591, 1140, 1608, 1827
MslI	CAYNNNNRTG	8 cut(s)	613, 827, 980, 992, 1167, 1238, 1331, 1386
MspA1I	CMGCKG	1 cut(s)	156
MspCI	CTTAAG	1 cut(s)	1826
MspI	CCGG	4 cut(s)	99, 806, 1180, 1458
MunI	CAATTG	2 cut(s)	1006, 1561
MvnI	CGCG	5 cut(s)	156, 177, 443, 445, 498
MwoI	GCNNNNNNNGC	4 cut(s)	335, 440, 537, 802
NcoI	CCATGG	1 cut(s)	564
NdeI	CATATG	1 cut(s)	1861
NdeII	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
NlaIV	GGNNCC	1 cut(s)	587
NmeAIII	GCCGAG	2 cut(s)	319, 1825
NmuCI	GTSAC	4 cut(s)	121, 1111, 1645, 1750
NspI	RCATGY	4 cut(s)	1198, 1237, 1704, 1723
NspV	TTCGAA	1 cut(s)	1503
PaeI	GCATGC	1 cut(s)	1704
PaeR7I	CTCGAG	1 cut(s)	1728
PagI	TCATGA	5 cut(s)	828, 987, 1162, 1303, 1387
PaqCI	CACCTGC	1 cut(s)	407
PceI	AGGCCT	2 cut(s)	299, 629
PciI	ACATGT	2 cut(s)	1194, 1233
PcsI	WCGNNNNNNNCGW	1 cut(s)	543
PdmI	GAANNNNTTC	2 cut(s)	347, 659
PfeI	GAWTC	3 cut(s)	307, 354, 1045
PflFI	GACNNNGTC	2 cut(s)	182, 1117
Ple19I	CGATCG	1 cut(s)	468
PleI	GAGTC	4 cut(s)	18, 874, 1916, 1929
PpsI	GAGTC	4 cut(s)	18, 874, 1916, 1929
Ppu21I	YACGTR	1 cut(s)	1029
PscI	ACATGT	2 cut(s)	1194, 1233
PsiI	TTATAA	1 cut(s)	927
PspEI	GGTNACC	1 cut(s)	121
PspFI	CCCAGC	1 cut(s)	1472
PspN4I	GGNNCC	1 cut(s)	587
PspPI	GGNCC	1 cut(s)	1418
PspXI	VCTCGAGB	1 cut(s)	1728
PstI	CTGCAG	1 cut(s)	1264
PsyI	GACNNNGTC	2 cut(s)	182, 1117
PvuI	CGATCG	1 cut(s)	468
RsaI	GTAC	2 cut(s)	767, 1031
RsaNI	GTAC	2 cut(s)	766, 1030
RseI	CAYNNNNRTG	8 cut(s)	613, 827, 980, 992, 1167, 1238, 1331, 1386
SacII	CCGCGG	1 cut(s)	157
SaqAI	TTAA	4 cut(s)	591, 1140, 1608, 1827
Sau3AI	GATC	6 cut(s)	465, 550, 825, 831, 1219, 1557
Sau96I	GGNCC	1 cut(s)	1418
SchI	GAGTC	4 cut(s)	18, 875, 1917, 1930
SfaNI	GCATC	3 cut(s)	417, 1216, 1605
SfcI	CTRYAG	2 cut(s)	1260, 1651
Sfr274I	CTCGAG	1 cut(s)	1728
Sfr303I	CCGCGG	1 cut(s)	157
SfuI	TTCGAA	1 cut(s)	1503
SgrBI	CCGCGG	1 cut(s)	157
SlaI	CTCGAG	1 cut(s)	1728
SmiMI	CAYNNNNRTG	8 cut(s)	613, 827, 980, 992, 1167, 1238, 1331, 1386
SmlI	CTYRAG	4 cut(s)	311, 1511, 1728, 1826
SmoI	CTYRAG	4 cut(s)	311, 1511, 1728, 1826
SnaBI	TACGTA	1 cut(s)	1029
SphI	GCATGC	1 cut(s)	1704
SseBI	AGGCCT	2 cut(s)	299, 629
StuI	AGGCCT	2 cut(s)	299, 629
StyI	CCWWGG	2 cut(s)	564, 1567
TaaI	ACNGT	5 cut(s)	514, 1034, 1345, 1498, 1520
TaiI	ACGT	3 cut(s)	233, 1031, 1148
TauI	GCSGC	9 cut(s)	15, 105, 159, 177, 437, 501, 685, 688, 1355
TfiI	GAWTC	3 cut(s)	307, 354, 1045
Tru1I	TTAA	4 cut(s)	591, 1140, 1608, 1827
Tru9I	TTAA	4 cut(s)	591, 1140, 1608, 1827
TscAI	CASTG	6 cut(s)	671, 1039, 1327, 1525, 1812, 1872
TseFI	GTSAC	4 cut(s)	121, 1111, 1645, 1750
TseI	GCWGC	7 cut(s)	540, 543, 724, 1066, 1259, 1734, 1831
Tsp45I	GTSAC	4 cut(s)	121, 1111, 1645, 1750
TspGWI	ACGGA	3 cut(s)	103, 265, 1697
TspRI	CASTG	6 cut(s)	671, 1039, 1327, 1525, 1812, 1872
Tth111I	GACNNNGTC	2 cut(s)	182, 1117
Vha464I	CTTAAG	1 cut(s)	1826
XapI	RAATTY	4 cut(s)	344, 377, 913, 1901
XceI	RCATGY	4 cut(s)	1198, 1237, 1704, 1723
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1932
XhoI	CTCGAG	1 cut(s)	1728
XmnI	GAANNNNTTC	2 cut(s)	347, 659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.