Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0013399

Physical Location & Seq

Genomic Coordinates Reverse (-)

56210576 .. 56212604

Gene Structure 2029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G034250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAGACACCGCCGCCACCTGAGACTGGTTCTGGCAATCCCCACGCGCCGCCACTACGCCACAAAATACACCGCCAAAGTAACCTCAACGTCCCCAACCGGCCGCACCCTCTCCGTCGAGGTGACCCCACCACCTCCCCTCCCCACCGACATCCGCGGCTACACTCTCCCCCGCCGCGACCTCGTCTGCAAAGCCACCCAAATCATCCTCCACCAATCCCGCTCCGCCACGTCGGATCCCTTCCTCGACCTCTCCGACTACCTCTCCTCCCTCTCCCTCTCCCTCACCCCCGCCGAAGCCTCCGAGATCCTCAAGTCCCTAAACGACCCCGACCTCGCCTTAAAATTCTTCCGATTCTGCCCCTCCCTTTCCCCCAAATTCCAACACGACGCCTTCAGCTGCAACCGCCTCCTCCTCATCCTCTCCAAGTCCGCCGCCCCCGCCCGCTTCGACCTCGCCCGCTCGATCGTCTCCGACATGCACCGCTCCAACATACGCGGCAACATCTCCACCGTCAATCTCCTCATCGGCCTCTTCGGCAACACCGACGACCTGGAAACCACCATGGGCCTGGTGAAGAAATGGAGCCTCAGCATGACCTCCTACACATACAAATGTCTAGTTCAGGCCTTCTTGCGATCCTACAATTCCACCAAGGCCTTCCAGTCCTACATGGAAATGCGTCGCCATGGTCACAAATTGGACATTTACTCTTACAATATGCTGCTGCATGCACTTGCCAAAGACGAAAAGGTTGAGCAGGCACACAAGGTGTTTGAAGATATGAAGAGGAAGGATTGCGAGCCGGATGAGTTTACATACACAATCATGATCAGAATGAGTGGGAAATTGGGTAAAGGGGATGAGTGTATGGCGTTTTTTCGGGAATTGTTGAACAAAGGTTGCAATTTGAATTTGATTGTTTATAATACCGTCATTCAGGCTCTTGCTAGGAGCAACATGGTTGATAAGGCGGTCCTTGTGCCGAATGAGTTTACTTACAGTGTGATTTTGAATCTTTTGGTTGCGCAAGGGCAGCTTGGTAGGTTAGATGAGGTGGTGGAGATGTCGAAGAGATATGTGACTAAGTCTATATACGCGTATCTTGTTAAGACGTTGAGCAAATTGGGTCATGATGATGAAGCCCACCGGCTGTTCTGCAACATGTGGAAATTCCATGACAAGGGGGATCGGGATGCGTACATGTCGATGTTAGAGAGTTTGTGTTCTGCAGGTAAAACTGCGGAGGCCGTTGATATGTTGAGTAACATTCATGAGAAAGGGGTATCCACTGACACTATGATGTATAACACAGTGTTGGCCGCGCTTGGGAGGTTGAAGCAAATATCAAATCTTCATGAAGTGTTTGAAAAGATGAAAAATGATGGCCCTGAACCGGATATATTTACCTACAACATTCTGATTTCCAGCTTTGGTAGGGCTGGGAAGGTTGATGAGGCGATGACAATATTCGAACAGCTTGAGAACAGTGATTGTAAACCTGATATCGTATCTTACAATTCATTGATCAATTGCCTTGGGAAGAATGGTGATGTGGATGAAGCCCACATGAGGTTCAAGGAGATGCAGGAGAAAGGGTTCAGCCCTGATGTTGTCACCTACAGCACTCTAATCGAGTGCTTTGGCAAGACAGATAGGGTTGACATGGCGTGCAGGTTGTTCGATGACATGCTTGCTCAAGGCTGCTGTCCAAACATTGTCACCTACAACATCTTGCTTGATTGTCTTGAGAGGTGTGGGAGGACCGCCGAGGCAGTGGATTTGTATGCAAAACTTAAGCAGCAGGGTTTGACGCCGGATTGGATTACATATTCAGTGCTTGAACGACTGCAAAGTGGTTCTCATAGGAAATTCAGAGTCCGTAGGCAGAGTCCTATCACAGGTTGGGTTGTCAGCCCTATAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

642

Amino Acids

72.88

Weight (kDa)

8.58

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	201 - 248	1.5e-08	PPR repeat family
PPR_long	PF17177	208 - 331	4.3e-13	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	226 - 283	2.7e-11	Pentatricopeptide repeat domain
TPR_24	PF23276	228 - 326	1.3e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	231 - 263	5.2e-06	PPR repeat
PPR_2	PF13041	235 - 280	3.3e-17	PPR repeat family
PPR	PF01535	237 - 267	6.6e-06	PPR repeat
TPR_24	PF23276	401 - 493	3.3e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	421 - 479	5.5e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	432 - 478	1.2e-10	PPR repeat family
PPR_long	PF17177	455 - 616	1.4e-11	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	463 - 494	5.7e-11	PPR repeat
PPR_3	PF13812	465 - 516	2.9e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	466 - 513	7.2e-14	PPR repeat family
PPR	PF01535	469 - 499	4.6e-07	PPR repeat
TPR_24	PF23276	479 - 598	2.4e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	490 - 550	3.5e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	498 - 529	7e-10	PPR repeat
PPR_2	PF13041	501 - 549	7.2e-18	PPR repeat family
PPR	PF01535	504 - 534	2.6e-09	PPR repeat
PPR_3	PF13812	526 - 581	4.1e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	532 - 564	1.1e-09	PPR repeat
PPR_2	PF13041	536 - 583	2.6e-16	PPR repeat family
PPR	PF01535	539 - 569	3.8e-06	PPR repeat
PPR_3	PF13812	559 - 614	6.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	568 - 595	4.9e-07	PPR repeat
PPR_2	PF13041	571 - 614	4.5e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51965
fragaria_vesca	FvH4_6g32590
malus_domestica	MD09G1200200.v1.1
prunus_persica	Prupe.3G056800_v2.0.a1
pyrus_communis	pycom09g11780 pycom15g36760
rosa_chinensis	RchiOBHm_Chr2g0141041
rosa_laevigata	RLG00000019910
rosa_multiflora	Rmu_sc0004769.1_g000016 Rmu_sc0012897.1_g000006
rosa_roxburghii	Rroxscaffold_2G00104260
rosa_rugosa	Rorug02G0366300
rosa_samantha	Rh2AG417700 Rh2BG427600 Rh2CG404000 Rh2DG437100
rosa_wichuraiana	Rw2G034190 Rw2G034250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	927
Acc16I	TGCGCA	1 cut(s)	1029
Acc36I	ACCTGC	2 cut(s)	1223, 1665
AccBSI	CCGCTC	3 cut(s)	222, 462, 486
AccII	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
AclWI	GGATC	5 cut(s)	230, 243, 301, 633, 1197
AcoI	YGGCCR	2 cut(s)	100, 1320
AcsI	RAATTY	5 cut(s)	344, 377, 913, 1172, 1871
AcuI	CTGAAG	1 cut(s)	379
AcyI	GRCGYC	2 cut(s)	390, 1814
AdeI	CACNNNGTG	1 cut(s)	772
AfaI	GTAC	1 cut(s)	1202
AfiI	CCNNNNNNNGG	6 cut(s)	25, 1183, 1329, 1396, 1572, 1901
AflII	CTTAAG	1 cut(s)	1796
AflIII	ACRYGT	3 cut(s)	1098, 1164, 1203
AgsI	TTSAA	8 cut(s)	779, 895, 913, 1015, 1339, 1370, 1579, 1844
AjiI	CACGTC	1 cut(s)	231
AjnI	CCWGG	2 cut(s)	552, 570
AloI	GAACNNNNNNTCC	2 cut(s)	1583, 1615
AluBI	AGCT	4 cut(s)	399, 1039, 1431, 1480
AluI	AGCT	4 cut(s)	399, 1039, 1431, 1480
Alw26I	GTCTC	2 cut(s)	16, 475
AlwI	GGATC	5 cut(s)	230, 243, 301, 633, 1197
AoxI	GGCC	8 cut(s)	100, 529, 568, 627, 657, 1248, 1320, 1387
ApeKI	GCWGC	6 cut(s)	399, 724, 727, 1036, 1704, 1801
ApoI	RAATTY	5 cut(s)	344, 377, 913, 1172, 1871
Asp700I	GAANNNNTTC	1 cut(s)	1598
AspLEI	GCGC	3 cut(s)	48, 1030, 1327
AspS9I	GGNCC	4 cut(s)	568, 976, 1388, 1764
AsuHPI	GGTGA	6 cut(s)	133, 277, 586, 1562, 1609, 1714
AsuII	TTCGAA	1 cut(s)	1473
AvaII	GGWCC	2 cut(s)	976, 1764
BamHI	GGATCC	1 cut(s)	235
BbvCI	CCTCAGC	1 cut(s)	590
BbvI	GCAGC	6 cut(s)	386, 711, 714, 1048, 1691, 1813
BccI	CCATC	1 cut(s)	1379
BceAI	ACGGC	1 cut(s)	1235
BcgI	CGANNNNNNTGC	4 cut(s)	1615, 1649, 1663, 1697
BciT130I	CCWGG	2 cut(s)	554, 572
BciVI	GTATCC	1 cut(s)	1297
BclI	TGATCA	2 cut(s)	831, 1527
BcoDI	GTCTC	2 cut(s)	16, 475
BfaI	CTAG	2 cut(s)	620, 951
BfmI	CTRYAG	2 cut(s)	1230, 1621
BfrI	CTTAAG	1 cut(s)	1796
BfuAI	ACCTGC	2 cut(s)	1223, 1665
BfuI	GTATCC	1 cut(s)	1297
BglI	GCCNNNNNGGC	1 cut(s)	537
Bme1390I	CCNGG	2 cut(s)	554, 572
Bme18I	GGWCC	2 cut(s)	976, 1764
BmgBI	CACGTC	1 cut(s)	231
BmgT120I	GGNCC	4 cut(s)	568, 976, 1388, 1764
BmiI	GGNNCC	2 cut(s)	237, 587
BmrFI	CCNGG	2 cut(s)	554, 572
BmsI	GCATC	2 cut(s)	1186, 1575
Bpu10I	CCTNAGC	1 cut(s)	590
Bpu14I	TTCGAA	1 cut(s)	1473
BpuEI	CTTGAG	4 cut(s)	296, 1502, 1683, 1769
BsaHI	GRCGYC	2 cut(s)	390, 1814
BsaJI	CCNNGG	6 cut(s)	154, 564, 654, 688, 1537, 1770
BsaWI	WCCGGW	1 cut(s)	1396
BsaXI	ACNNNNNCTCC	8 cut(s)	123, 153, 248, 251, 278, 281, 1583, 1613
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 1183, 1329, 1396, 1572, 1901
Bse118I	RCCGGY	2 cut(s)	98, 1149
Bse1I	ACTGG	2 cut(s)	30, 664
BseBI	CCWGG	2 cut(s)	554, 572
BseDI	CCNNGG	6 cut(s)	154, 564, 654, 688, 1537, 1770
BseGI	GGATG	7 cut(s)	150, 204, 417, 814, 868, 1201, 1564
BseLI	CCNNNNNNNGG	6 cut(s)	25, 1183, 1329, 1396, 1572, 1901
BseMII	CTCAG	2 cut(s)	11, 604
BseNI	ACTGG	2 cut(s)	30, 664
BseRI	GAGGAG	4 cut(s)	256, 401, 404, 512
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	6 cut(s)	386, 711, 714, 1048, 1691, 1813
BseYI	CCCAGC	1 cut(s)	1442
BsgI	GTGCAG	1 cut(s)	1693
Bsh1236I	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
Bsh1285I	CGRYCG	2 cut(s)	103, 468
BshFI	GGCC	8 cut(s)	102, 531, 570, 629, 659, 1250, 1322, 1389
BsiEI	CGRYCG	2 cut(s)	103, 468
BsiSI	CCGG	5 cut(s)	99, 806, 1150, 1397, 1817
BslFI	GGGAC	2 cut(s)	76, 301
BslI	CCNNNNNNNGG	6 cut(s)	25, 1183, 1329, 1396, 1572, 1901
BsmAI	GTCTC	2 cut(s)	16, 475
BsmBI	CGTCTC	1 cut(s)	475
BsmFI	GGGAC	2 cut(s)	76, 301
BsnI	GGCC	8 cut(s)	102, 531, 570, 629, 659, 1250, 1322, 1389
Bsp119I	TTCGAA	1 cut(s)	1473
Bsp143I	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
Bsp19I	CCATGG	2 cut(s)	564, 688
BspANI	GGCC	8 cut(s)	102, 531, 570, 629, 659, 1250, 1322, 1389
BspCNI	CTCAG	2 cut(s)	12, 603
BspFNI	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
BspHI	TCATGA	4 cut(s)	828, 1132, 1273, 1357
BspLI	GGNNCC	2 cut(s)	237, 587
BspMAI	CTGCAG	1 cut(s)	1234
BspMI	ACCTGC	2 cut(s)	1223, 1665
BspPI	GGATC	5 cut(s)	230, 243, 301, 633, 1197
BspT104I	TTCGAA	1 cut(s)	1473
BspTI	CTTAAG	1 cut(s)	1796
BsrBI	CCGCTC	3 cut(s)	222, 462, 486
BsrFI	RCCGGY	2 cut(s)	98, 1149
BsrI	ACTGG	2 cut(s)	30, 664
BssAI	RCCGGY	2 cut(s)	98, 1149
BssECI	CCNNGG	6 cut(s)	154, 564, 654, 688, 1537, 1770
BssMI	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
BssNI	GRCGYC	2 cut(s)	390, 1814
BssT1I	CCWWGG	4 cut(s)	564, 654, 688, 1537
Bst2UI	CCWGG	2 cut(s)	554, 572
Bst4CI	ACNGT	5 cut(s)	514, 934, 1004, 1315, 1490
Bst6I	CTCTTC	3 cut(s)	539, 782, 1067
BstACI	GRCGYC	2 cut(s)	390, 1814
BstAFI	CTTAAG	1 cut(s)	1796
BstBI	TTCGAA	1 cut(s)	1473
BstC8I	GCNNGC	7 cut(s)	445, 460, 732, 762, 803, 1672, 1695
BstDEI	CTNAG	3 cut(s)	20, 590, 1086
BstDSI	CCRYGG	3 cut(s)	154, 564, 688
BstEII	GGTNACC	1 cut(s)	121
BstENI	CCTNNNNNAGG	1 cut(s)	1899
BstF5I	GGATG	7 cut(s)	150, 204, 417, 814, 868, 1201, 1564
BstFNI	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
BstHHI	GCGC	3 cut(s)	48, 1030, 1327
BstKTI	GATC	7 cut(s)	238, 309, 468, 641, 834, 1192, 1530
BstMAI	GTCTC	2 cut(s)	16, 475
BstMBI	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
BstMCI	CGRYCG	2 cut(s)	103, 468
BstMWI	GCNNNNNNNGC	4 cut(s)	405, 440, 537, 1036
BstNI	CCWGG	2 cut(s)	554, 572
BstNSI	RCATGY	5 cut(s)	481, 734, 1168, 1207, 1693
BstPI	GGTNACC	1 cut(s)	121
BstSCI	CCNGG	2 cut(s)	552, 570
BstSFI	CTRYAG	2 cut(s)	1230, 1621
BstUI	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
BstV1I	GCAGC	6 cut(s)	386, 711, 714, 1048, 1691, 1813
BstX2I	RGATCY	2 cut(s)	235, 306
BstXI	CCANNNNNNTGG	1 cut(s)	571
BstYI	RGATCY	2 cut(s)	235, 306
BstZI	CGGCCG	1 cut(s)	100
BsuI	GTATCC	1 cut(s)	1297
BsuRI	GGCC	8 cut(s)	102, 531, 570, 629, 659, 1250, 1322, 1389
BtgI	CCRYGG	3 cut(s)	154, 564, 688
BtgZI	GCGATG	1 cut(s)	1475
BtrI	CACGTC	1 cut(s)	231
BtsCI	GGATG	7 cut(s)	150, 204, 417, 814, 868, 1201, 1564
BtsI	GCAGTG	1 cut(s)	1782
BtsIMutI	CAGTG	6 cut(s)	1009, 1290, 1320, 1495, 1782, 1842
BveI	ACCTGC	2 cut(s)	1223, 1665
Cac8I	GCNNGC	7 cut(s)	445, 460, 732, 762, 803, 1672, 1695
CciI	TCATGA	4 cut(s)	828, 1132, 1273, 1357
CfoI	GCGC	3 cut(s)	48, 1030, 1327
Cfr10I	RCCGGY	2 cut(s)	98, 1149
Cfr13I	GGNCC	4 cut(s)	568, 976, 1388, 1764
Cfr42I	CCGCGG	1 cut(s)	157
CseI	GACGC	3 cut(s)	398, 671, 1822
Csp6I	GTAC	1 cut(s)	1201
CviQI	GTAC	1 cut(s)	1201
DdeI	CTNAG	3 cut(s)	20, 590, 1086
DpnI	GATC	7 cut(s)	237, 308, 467, 640, 833, 1191, 1529
DpnII	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
DraIII	CACNNNGTG	1 cut(s)	772
EaeI	YGGCCR	2 cut(s)	100, 1320
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	3 cut(s)	539, 782, 1067
EarI	CTCTTC	3 cut(s)	539, 782, 1067
EciI	GGCGGA	2 cut(s)	214, 421
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	4 cut(s)	564, 654, 688, 1537
Eco147I	AGGCCT	2 cut(s)	629, 659
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	2 cut(s)	976, 1764
Eco52I	CGGCCG	1 cut(s)	100
Eco57I	CTGAAG	1 cut(s)	379
Eco91I	GGTNACC	1 cut(s)	121
EcoNI	CCTNNNNNAGG	1 cut(s)	1899
EcoO65I	GGTNACC	1 cut(s)	121
EcoRII	CCWGG	2 cut(s)	552, 570
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	4 cut(s)	564, 654, 688, 1537
ErhI	CCWWGG	4 cut(s)	564, 654, 688, 1537
Esp3I	CGTCTC	1 cut(s)	475
FalI	AAGNNNNNCTT	2 cut(s)	1023, 1055
FaqI	GGGAC	2 cut(s)	76, 301
FauI	CCCGC	6 cut(s)	179, 227, 298, 448, 452, 467
FbaI	TGATCA	2 cut(s)	831, 1527
FokI	GGATG	7 cut(s)	137, 191, 404, 821, 875, 1208, 1571
FspBI	CTAG	2 cut(s)	620, 951
FspI	TGCGCA	1 cut(s)	1029
GlaI	GCGC	3 cut(s)	47, 1029, 1326
GsaI	CCCAGC	1 cut(s)	1446
HaeIII	GGCC	8 cut(s)	102, 531, 570, 629, 659, 1250, 1322, 1389
HapII	CCGG	5 cut(s)	99, 806, 1150, 1397, 1817
HgaI	GACGC	3 cut(s)	398, 671, 1822
HhaI	GCGC	3 cut(s)	48, 1030, 1327
Hin1I	GRCGYC	2 cut(s)	390, 1814
Hin6I	GCGC	3 cut(s)	46, 1028, 1325
HinP1I	GCGC	3 cut(s)	46, 1028, 1325
HincII	GTYRAC	1 cut(s)	1663
HindII	GTYRAC	1 cut(s)	1663
HinfI	GANTC	4 cut(s)	354, 1015, 1878, 1891
HpaII	CCGG	5 cut(s)	99, 806, 1150, 1397, 1817
HphI	GGTGA	6 cut(s)	133, 277, 586, 1562, 1609, 1714
Hpy166II	GTNNAC	4 cut(s)	816, 996, 1499, 1663
Hpy188I	TCNGA	8 cut(s)	235, 256, 304, 353, 475, 836, 1422, 1877
Hpy188III	TCNNGA	7 cut(s)	829, 884, 1133, 1193, 1274, 1358, 1748
Hpy8I	GTNNAC	4 cut(s)	816, 996, 1499, 1663
Hpy99I	CGWCG	5 cut(s)	119, 235, 392, 551, 687
HpyAV	CCTTC	6 cut(s)	250, 403, 640, 670, 787, 1441
HpyCH4III	ACNGT	5 cut(s)	514, 934, 1004, 1315, 1490
HpyCH4IV	ACGT	3 cut(s)	89, 230, 1115
HpyF10VI	GCNNNNNNNGC	4 cut(s)	405, 440, 537, 1036
HpyF3I	CTNAG	3 cut(s)	20, 590, 1086
HpySE526I	ACGT	3 cut(s)	89, 230, 1115
Hsp92I	GRCGYC	2 cut(s)	390, 1814
HspAI	GCGC	3 cut(s)	46, 1028, 1325
Ksp22I	TGATCA	2 cut(s)	831, 1527
KspI	CCGCGG	1 cut(s)	157
Kzo9I	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
LmnI	GCTCC	4 cut(s)	227, 491, 585, 954
Lsp1109I	GCAGC	6 cut(s)	386, 711, 714, 1048, 1691, 1813
LweI	GCATC	2 cut(s)	1186, 1575
MaeI	CTAG	2 cut(s)	620, 951
MaeII	ACGT	3 cut(s)	89, 230, 1115
MaeIII	GTNAC	7 cut(s)	79, 121, 692, 1081, 1265, 1615, 1720
MalI	GATC	7 cut(s)	237, 308, 467, 640, 833, 1191, 1529
MbiI	CCGCTC	3 cut(s)	222, 462, 486
MboI	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
MboII	GAAGA	8 cut(s)	340, 526, 589, 791, 799, 1084, 1346, 1555
MfeI	CAATTG	1 cut(s)	1531
MflI	RGATCY	2 cut(s)	235, 306
MluI	ACGCGT	1 cut(s)	1098
MlyI	GAGTC	2 cut(s)	1887, 1900
MmeI	TCCRAC	5 cut(s)	213, 279, 406, 498, 513
MroXI	GAANNNNTTC	1 cut(s)	1598
MseI	TTAA	3 cut(s)	341, 1110, 1797
MslI	CAYNNNNRTG	6 cut(s)	613, 677, 827, 1137, 1208, 1301
MspA1I	CMGCKG	2 cut(s)	156, 399
MspCI	CTTAAG	1 cut(s)	1796
MspI	CCGG	5 cut(s)	99, 806, 1150, 1397, 1817
MspR9I	CCNGG	2 cut(s)	554, 572
MunI	CAATTG	1 cut(s)	1531
MvaI	CCWGG	2 cut(s)	554, 572
MvnI	CGCG	6 cut(s)	46, 156, 177, 498, 1100, 1325
MwoI	GCNNNNNNNGC	4 cut(s)	405, 440, 537, 1036
NcoI	CCATGG	2 cut(s)	564, 688
NdeII	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
NlaIV	GGNNCC	2 cut(s)	237, 587
NmeAIII	GCCGAG	1 cut(s)	1795
NmuCI	GTSAC	5 cut(s)	121, 692, 1081, 1615, 1720
NsbI	TGCGCA	1 cut(s)	1029
NspI	RCATGY	5 cut(s)	481, 734, 1168, 1207, 1693
NspV	TTCGAA	1 cut(s)	1473
PaeI	GCATGC	1 cut(s)	734
PagI	TCATGA	4 cut(s)	828, 1132, 1273, 1357
PceI	AGGCCT	2 cut(s)	629, 659
PciI	ACATGT	2 cut(s)	1164, 1203
PcsI	WCGNNNNNNNCGW	2 cut(s)	252, 543
PdmI	GAANNNNTTC	1 cut(s)	1598
PfeI	GAWTC	2 cut(s)	354, 1015
PflFI	GACNNNGTC	2 cut(s)	182, 1087
Ple19I	CGATCG	1 cut(s)	468
PleI	GAGTC	2 cut(s)	1886, 1899
PpsI	GAGTC	2 cut(s)	1886, 1899
PscI	ACATGT	2 cut(s)	1164, 1203
PsiI	TTATAA	1 cut(s)	927
Psp6I	CCWGG	2 cut(s)	552, 570
PspEI	GGTNACC	1 cut(s)	121
PspFI	CCCAGC	1 cut(s)	1442
PspGI	CCWGG	2 cut(s)	552, 570
PspN4I	GGNNCC	2 cut(s)	237, 587
PspPI	GGNCC	4 cut(s)	568, 976, 1388, 1764
PstI	CTGCAG	1 cut(s)	1234
PsuI	RGATCY	2 cut(s)	235, 306
PsyI	GACNNNGTC	2 cut(s)	182, 1087
PvuI	CGATCG	1 cut(s)	468
PvuII	CAGCTG	1 cut(s)	399
RsaI	GTAC	1 cut(s)	1202
RsaNI	GTAC	1 cut(s)	1201
RseI	CAYNNNNRTG	6 cut(s)	613, 677, 827, 1137, 1208, 1301
SacII	CCGCGG	1 cut(s)	157
SaqAI	TTAA	3 cut(s)	341, 1110, 1797
Sau3AI	GATC	7 cut(s)	235, 306, 465, 638, 831, 1189, 1527
Sau96I	GGNCC	4 cut(s)	568, 976, 1388, 1764
SchI	GAGTC	2 cut(s)	1887, 1900
ScrFI	CCNGG	2 cut(s)	554, 572
SfaNI	GCATC	2 cut(s)	1186, 1575
SfcI	CTRYAG	2 cut(s)	1230, 1621
Sfr303I	CCGCGG	1 cut(s)	157
SfuI	TTCGAA	1 cut(s)	1473
SgrBI	CCGCGG	1 cut(s)	157
SinI	GGWCC	2 cut(s)	976, 1764
SmiMI	CAYNNNNRTG	6 cut(s)	613, 677, 827, 1137, 1208, 1301
SmlI	CTYRAG	5 cut(s)	311, 1481, 1698, 1748, 1796
SmoI	CTYRAG	5 cut(s)	311, 1481, 1698, 1748, 1796
SphI	GCATGC	1 cut(s)	734
SseBI	AGGCCT	2 cut(s)	629, 659
SspI	AATATT	1 cut(s)	1470
SspMI	CTAG	2 cut(s)	620, 951
StuI	AGGCCT	2 cut(s)	629, 659
StyD4I	CCNGG	2 cut(s)	552, 570
StyI	CCWWGG	4 cut(s)	564, 654, 688, 1537
TaaI	ACNGT	5 cut(s)	514, 934, 1004, 1315, 1490
TaiI	ACGT	3 cut(s)	92, 233, 1118
TaqI	TCGA	9 cut(s)	117, 246, 450, 464, 1070, 1208, 1473, 1635, 1683
TauI	GCSGC	8 cut(s)	15, 51, 105, 159, 177, 437, 501, 1325
TfiI	GAWTC	2 cut(s)	354, 1015
Tru1I	TTAA	3 cut(s)	341, 1110, 1797
Tru9I	TTAA	3 cut(s)	341, 1110, 1797
TscAI	CASTG	6 cut(s)	1009, 1297, 1320, 1495, 1782, 1842
TseFI	GTSAC	5 cut(s)	121, 692, 1081, 1615, 1720
TseI	GCWGC	6 cut(s)	399, 724, 727, 1036, 1704, 1801
Tsp45I	GTSAC	5 cut(s)	121, 692, 1081, 1615, 1720
TspDTI	ATGAA	8 cut(s)	800, 1155, 1262, 1346, 1374, 1391, 1512, 1575
TspGWI	ACGGA	2 cut(s)	103, 1871
TspRI	CASTG	6 cut(s)	1009, 1297, 1320, 1495, 1782, 1842
Tth111I	GACNNNGTC	2 cut(s)	182, 1087
Vha464I	CTTAAG	1 cut(s)	1796
VpaK11BI	GGWCC	2 cut(s)	976, 1764
XagI	CCTNNNNNAGG	1 cut(s)	1899
XapI	RAATTY	5 cut(s)	344, 377, 913, 1172, 1871
XceI	RCATGY	5 cut(s)	481, 734, 1168, 1207, 1693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	568
XmnI	GAANNNNTTC	1 cut(s)	1598
XspI	CTAG	2 cut(s)	620, 951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.