Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51965 |
| fragaria_vesca | FvH4_6g32590 |
| malus_domestica | MD09G1200200.v1.1 |
| prunus_persica | Prupe.3G056800_v2.0.a1 |
| pyrus_communis | pycom09g11780 pycom15g36760 |
| rosa_chinensis | RchiOBHm_Chr2g0141041 |
| rosa_laevigata | RLG00000019910 |
| rosa_multiflora | Rmu_sc0004769.1_g000016 Rmu_sc0012897.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00104260 |
| rosa_rugosa | Rorug02G0366300 |
| rosa_samantha | Rh2AG417700 Rh2BG427600 Rh2CG404000 Rh2DG437100 |
| rosa_wichuraiana | Rw2G034190 Rw2G034250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 729 |
| AarI | CACCTGC | 1 cut(s) | 440 |
| Acc36I | ACCTGC | 3 cut(s) | 440, 1396, 1728 |
| AccBSI | CCGCTC | 1 cut(s) | 519 |
| AccII | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| AclWI | GGATC | 3 cut(s) | 493, 1260, 1851 |
| AcsI | RAATTY | 1 cut(s) | 409 |
| AcuI | CTGAAG | 3 cut(s) | 600, 641, 1113 |
| AcyI | GRCGYC | 1 cut(s) | 718 |
| AfaI | GTAC | 6 cut(s) | 98, 854, 1064, 1265, 1370, 1475 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 477, 511, 1635, 1964 |
| AflII | CTTAAG | 1 cut(s) | 1859 |
| AflIII | ACRYGT | 5 cut(s) | 593, 753, 1161, 1260, 1266 |
| AgsI | TTSAA | 6 cut(s) | 1078, 1402, 1538, 1727, 1887, 1907 |
| AjiI | CACGTC | 2 cut(s) | 261, 594 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 222, 254 |
| AluBI | AGCT | 9 cut(s) | 733, 1102, 1208, 1236, 1388, 1494, 1505, 1543, 1858 |
| AluI | AGCT | 9 cut(s) | 733, 1102, 1208, 1236, 1388, 1494, 1505, 1543, 1858 |
| Alw26I | GTCTC | 3 cut(s) | 145, 626, 906 |
| AlwI | GGATC | 3 cut(s) | 493, 1260, 1851 |
| AoxI | GGCC | 8 cut(s) | 31, 130, 562, 660, 1005, 1046, 1311, 1450 |
| ApeKI | GCWGC | 3 cut(s) | 1099, 1767, 1864 |
| ApoI | RAATTY | 1 cut(s) | 409 |
| AspLEI | GCGC | 4 cut(s) | 51, 78, 672, 769 |
| AspS9I | GGNCC | 3 cut(s) | 130, 514, 1451 |
| AsuC2I | CCSGG | 2 cut(s) | 478, 493 |
| AsuNHI | GCTAGC | 1 cut(s) | 769 |
| AvaII | GGWCC | 1 cut(s) | 514 |
| BbsI | GAAGAC | 1 cut(s) | 588 |
| BbvCI | CCTCAGC | 1 cut(s) | 1833 |
| BbvI | GCAGC | 3 cut(s) | 1111, 1754, 1876 |
| BccI | CCATC | 3 cut(s) | 24, 988, 1016 |
| BceAI | ACGGC | 2 cut(s) | 1465, 1883 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1678, 1712, 1726, 1760 |
| BclI | TGATCA | 2 cut(s) | 864, 1590 |
| BcnI | CCSGG | 2 cut(s) | 478, 493 |
| BcoDI | GTCTC | 3 cut(s) | 145, 626, 906 |
| BfaI | CTAG | 2 cut(s) | 770, 984 |
| BfmI | CTRYAG | 1 cut(s) | 1684 |
| BfrI | CTTAAG | 1 cut(s) | 1859 |
| BfuAI | ACCTGC | 3 cut(s) | 440, 1396, 1728 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 570 |
| BisI | GCNGC | 7 cut(s) | 13, 79, 187, 716, 1100, 1768, 1865 |
| BlsI | GCNGC | 7 cut(s) | 14, 80, 188, 717, 1101, 1769, 1866 |
| Bme1390I | CCNGG | 2 cut(s) | 478, 493 |
| Bme18I | GGWCC | 1 cut(s) | 514 |
| BmgBI | CACGTC | 2 cut(s) | 261, 594 |
| BmgT120I | GGNCC | 3 cut(s) | 130, 514, 1451 |
| BmiI | GGNNCC | 2 cut(s) | 26, 1453 |
| BmrFI | CCNGG | 2 cut(s) | 478, 493 |
| BmsI | GCATC | 2 cut(s) | 754, 1638 |
| BmtI | GCTAGC | 1 cut(s) | 773 |
| BpiI | GAAGAC | 1 cut(s) | 588 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1833 |
| BpuEI | CTTGAG | 3 cut(s) | 1565, 1746, 1832 |
| BpuMI | CCSGG | 2 cut(s) | 478, 493 |
| BsaAI | YACGTR | 4 cut(s) | 530, 852, 1062, 1473 |
| BsaBI | GATNNNNATC | 2 cut(s) | 702, 863 |
| BsaHI | GRCGYC | 1 cut(s) | 718 |
| BsaJI | CCNNGG | 5 cut(s) | 28, 147, 184, 1305, 1600 |
| BsaWI | WCCGGW | 2 cut(s) | 384, 1879 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 477, 511, 1635, 1964 |
| Bse118I | RCCGGY | 2 cut(s) | 1199, 1212 |
| Bse1I | ACTGG | 1 cut(s) | 244 |
| Bse3DI | GCAATG | 1 cut(s) | 829 |
| Bse8I | GATNNNNATC | 2 cut(s) | 702, 863 |
| BseDI | CCNNGG | 5 cut(s) | 28, 147, 184, 1305, 1600 |
| BseGI | GGATG | 6 cut(s) | 180, 323, 552, 769, 847, 1627 |
| BseJI | GATNNNNATC | 2 cut(s) | 702, 863 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 477, 511, 1635, 1964 |
| BseMI | GCAATG | 1 cut(s) | 829 |
| BseMII | CTCAG | 4 cut(s) | 11, 1316, 1432, 1824 |
| BseNI | ACTGG | 1 cut(s) | 244 |
| BseRI | GAGGAG | 4 cut(s) | 17, 289, 434, 437 |
| BseXI | GCAGC | 3 cut(s) | 1111, 1754, 1876 |
| BseYI | CCCAGC | 2 cut(s) | 1102, 1505 |
| Bsh1236I | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| Bsh1285I | CGRYCG | 1 cut(s) | 497 |
| BshFI | GGCC | 8 cut(s) | 33, 132, 564, 662, 1007, 1048, 1313, 1452 |
| BsiEI | CGRYCG | 1 cut(s) | 497 |
| BsiSI | CCGG | 7 cut(s) | 385, 478, 493, 839, 1200, 1213, 1880 |
| BslFI | GGGAC | 2 cut(s) | 378, 1271 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 477, 511, 1635, 1964 |
| BsmAI | GTCTC | 3 cut(s) | 145, 626, 906 |
| BsmBI | CGTCTC | 1 cut(s) | 145 |
| BsmFI | GGGAC | 2 cut(s) | 378, 1271 |
| BsnI | GGCC | 8 cut(s) | 33, 132, 564, 662, 1007, 1048, 1313, 1452 |
| Bsp1407I | TGTACA | 1 cut(s) | 1368 |
| Bsp143I | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| BspANI | GGCC | 8 cut(s) | 33, 132, 564, 662, 1007, 1048, 1313, 1452 |
| BspCNI | CTCAG | 4 cut(s) | 12, 1317, 1431, 1825 |
| BspFNI | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| BspHI | TCATGA | 2 cut(s) | 861, 1336 |
| BspLI | GGNNCC | 2 cut(s) | 26, 1453 |
| BspMI | ACCTGC | 3 cut(s) | 440, 1396, 1728 |
| BspOI | GCTAGC | 1 cut(s) | 773 |
| BspPI | GGATC | 3 cut(s) | 493, 1260, 1851 |
| BspTI | CTTAAG | 1 cut(s) | 1859 |
| BsrBI | CCGCTC | 1 cut(s) | 519 |
| BsrDI | GCAATG | 1 cut(s) | 829 |
| BsrFI | RCCGGY | 2 cut(s) | 1199, 1212 |
| BsrGI | TGTACA | 1 cut(s) | 1368 |
| BsrI | ACTGG | 1 cut(s) | 244 |
| BssAI | RCCGGY | 2 cut(s) | 1199, 1212 |
| BssECI | CCNNGG | 5 cut(s) | 28, 147, 184, 1305, 1600 |
| BssMI | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| BssNI | GRCGYC | 1 cut(s) | 718 |
| BssT1I | CCWWGG | 1 cut(s) | 1600 |
| Bst4CI | ACNGT | 6 cut(s) | 547, 1067, 1378, 1428, 1613, 1808 |
| BstACI | GRCGYC | 1 cut(s) | 718 |
| BstAFI | CTTAAG | 1 cut(s) | 1859 |
| BstAUI | TGTACA | 1 cut(s) | 1368 |
| BstBAI | YACGTR | 4 cut(s) | 530, 852, 1062, 1473 |
| BstC8I | GCNNGC | 8 cut(s) | 653, 771, 795, 836, 1046, 1735, 1758, 1949 |
| BstDEI | CTNAG | 5 cut(s) | 20, 1149, 1325, 1418, 1833 |
| BstDSI | CCRYGG | 2 cut(s) | 184, 1305 |
| BstF5I | GGATG | 6 cut(s) | 180, 323, 552, 769, 847, 1627 |
| BstFNI | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| BstHHI | GCGC | 4 cut(s) | 51, 78, 672, 769 |
| BstKTI | GATC | 7 cut(s) | 501, 861, 867, 1255, 1593, 1846, 1962 |
| BstMAI | GTCTC | 3 cut(s) | 145, 626, 906 |
| BstMBI | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| BstMCI | CGRYCG | 1 cut(s) | 497 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 570, 835, 1205, 1864 |
| BstNSI | RCATGY | 5 cut(s) | 757, 1270, 1324, 1737, 1756 |
| BstSCI | CCNGG | 2 cut(s) | 476, 491 |
| BstSFI | CTRYAG | 1 cut(s) | 1684 |
| BstSNI | TACGTA | 3 cut(s) | 852, 1062, 1473 |
| BstUI | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| BstV1I | GCAGC | 3 cut(s) | 1111, 1754, 1876 |
| BstV2I | GAAGAC | 1 cut(s) | 588 |
| BstX2I | RGATCY | 1 cut(s) | 1843 |
| BstYI | RGATCY | 1 cut(s) | 1843 |
| BsuRI | GGCC | 8 cut(s) | 33, 132, 564, 662, 1007, 1048, 1313, 1452 |
| BtgI | CCRYGG | 2 cut(s) | 184, 1305 |
| BtrI | CACGTC | 2 cut(s) | 261, 594 |
| BtsCI | GGATG | 6 cut(s) | 180, 323, 552, 769, 847, 1627 |
| BtsI | GCAGTG | 2 cut(s) | 99, 1845 |
| BtsIMutI | CAGTG | 5 cut(s) | 99, 576, 1072, 1426, 1845 |
| BveI | ACCTGC | 3 cut(s) | 440, 1396, 1728 |
| Cac8I | GCNNGC | 8 cut(s) | 653, 771, 795, 836, 1046, 1735, 1758, 1949 |
| CciI | TCATGA | 2 cut(s) | 861, 1336 |
| CfoI | GCGC | 4 cut(s) | 51, 78, 672, 769 |
| Cfr10I | RCCGGY | 2 cut(s) | 1199, 1212 |
| Cfr13I | GGNCC | 3 cut(s) | 130, 514, 1451 |
| Cfr42I | CCGCGG | 2 cut(s) | 187, 1308 |
| CseI | GACGC | 3 cut(s) | 213, 707, 1268 |
| Csp6I | GTAC | 6 cut(s) | 97, 853, 1063, 1264, 1369, 1474 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 511, 546, 1011, 1046 |
| CviQI | GTAC | 6 cut(s) | 97, 853, 1063, 1264, 1369, 1474 |
| DdeI | CTNAG | 5 cut(s) | 20, 1149, 1325, 1418, 1833 |
| DpnI | GATC | 7 cut(s) | 500, 860, 866, 1254, 1592, 1845, 1961 |
| DpnII | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| EciI | GGCGGA | 2 cut(s) | 133, 244 |
| Eco105I | TACGTA | 3 cut(s) | 852, 1062, 1473 |
| Eco130I | CCWWGG | 1 cut(s) | 1600 |
| Eco147I | AGGCCT | 3 cut(s) | 564, 662, 1048 |
| Eco32I | GATATC | 1 cut(s) | 1570 |
| Eco47I | GGWCC | 1 cut(s) | 514 |
| Eco57I | CTGAAG | 3 cut(s) | 600, 641, 1113 |
| EcoRV | GATATC | 1 cut(s) | 1570 |
| EcoT14I | CCWWGG | 1 cut(s) | 1600 |
| ErhI | CCWWGG | 1 cut(s) | 1600 |
| Esp3I | CGTCTC | 1 cut(s) | 145 |
| FaqI | GGGAC | 2 cut(s) | 378, 1271 |
| FauI | CCCGC | 2 cut(s) | 17, 207 |
| FauNDI | CATATG | 1 cut(s) | 1894 |
| FbaI | TGATCA | 2 cut(s) | 864, 1590 |
| Fnu4HI | GCNGC | 7 cut(s) | 13, 79, 187, 716, 1100, 1768, 1865 |
| FokI | GGATG | 6 cut(s) | 167, 310, 539, 776, 854, 1634 |
| Fsp4HI | GCNGC | 7 cut(s) | 13, 79, 187, 716, 1100, 1768, 1865 |
| FspBI | CTAG | 2 cut(s) | 770, 984 |
| GlaI | GCGC | 4 cut(s) | 50, 77, 671, 768 |
| GluI | GCNGC | 7 cut(s) | 13, 79, 187, 716, 1100, 1768, 1865 |
| GsaI | CCCAGC | 2 cut(s) | 1106, 1509 |
| HaeIII | GGCC | 8 cut(s) | 33, 132, 564, 662, 1007, 1048, 1313, 1452 |
| HapII | CCGG | 7 cut(s) | 385, 478, 493, 839, 1200, 1213, 1880 |
| HgaI | GACGC | 3 cut(s) | 213, 707, 1268 |
| HhaI | GCGC | 4 cut(s) | 51, 78, 672, 769 |
| Hin1I | GRCGYC | 1 cut(s) | 718 |
| Hin6I | GCGC | 4 cut(s) | 49, 76, 670, 767 |
| HinP1I | GCGC | 4 cut(s) | 49, 76, 670, 767 |
| HincII | GTYRAC | 2 cut(s) | 550, 1875 |
| HindII | GTYRAC | 2 cut(s) | 550, 1875 |
| HindIII | AAGCTT | 1 cut(s) | 1856 |
| HinfI | GANTC | 8 cut(s) | 378, 680, 899, 970, 1282, 1883, 1935, 1954 |
| HpaII | CCGG | 7 cut(s) | 385, 478, 493, 839, 1200, 1213, 1880 |
| Hpy188III | TCNNGA | 7 cut(s) | 343, 707, 862, 917, 1256, 1337, 1811 |
| Hpy99I | CGWCG | 3 cut(s) | 207, 265, 723 |
| HpyCH4III | ACNGT | 6 cut(s) | 547, 1067, 1378, 1428, 1613, 1808 |
| HpyCH4IV | ACGT | 7 cut(s) | 260, 529, 593, 851, 1061, 1178, 1472 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 570, 835, 1205, 1864 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 1149, 1325, 1418, 1833 |
| HpySE526I | ACGT | 7 cut(s) | 260, 529, 593, 851, 1061, 1178, 1472 |
| Hsp92I | GRCGYC | 1 cut(s) | 718 |
| HspAI | GCGC | 4 cut(s) | 49, 76, 670, 767 |
| Ksp22I | TGATCA | 2 cut(s) | 864, 1590 |
| KspI | CCGCGG | 2 cut(s) | 187, 1308 |
| Kzo9I | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| LmnI | GCTCC | 4 cut(s) | 30, 524, 987, 1233 |
| Lsp1109I | GCAGC | 3 cut(s) | 1111, 1754, 1876 |
| LweI | GCATC | 2 cut(s) | 754, 1638 |
| MaeI | CTAG | 2 cut(s) | 770, 984 |
| MaeII | ACGT | 7 cut(s) | 260, 529, 593, 851, 1061, 1178, 1472 |
| MaeIII | GTNAC | 7 cut(s) | 151, 246, 1328, 1348, 1525, 1678, 1783 |
| MalI | GATC | 7 cut(s) | 500, 860, 866, 1254, 1592, 1845, 1961 |
| MbiI | CCGCTC | 1 cut(s) | 519 |
| MboI | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| MboII | GAAGA | 6 cut(s) | 373, 593, 622, 832, 835, 1147 |
| MfeI | CAATTG | 1 cut(s) | 1039 |
| MflI | RGATCY | 1 cut(s) | 1843 |
| MluCI | AATT | 6 cut(s) | 409, 881, 1039, 1187, 1582, 1887 |
| MluI | ACGCGT | 2 cut(s) | 1161, 1260 |
| MlyI | GAGTC | 4 cut(s) | 908, 1291, 1944, 1963 |
| MmeI | TCCRAC | 6 cut(s) | 291, 303, 312, 546, 741, 1257 |
| MseI | TTAA | 3 cut(s) | 1641, 1860, 1985 |
| MslI | CAYNNNNRTG | 6 cut(s) | 860, 1013, 1200, 1271, 1319, 1419 |
| MspA1I | CMGCKG | 3 cut(s) | 186, 1102, 1307 |
| MspCI | CTTAAG | 1 cut(s) | 1859 |
| MspI | CCGG | 7 cut(s) | 385, 478, 493, 839, 1200, 1213, 1880 |
| MspR9I | CCNGG | 2 cut(s) | 478, 493 |
| MunI | CAATTG | 1 cut(s) | 1039 |
| MvnI | CGCG | 8 cut(s) | 49, 186, 202, 207, 507, 1163, 1262, 1307 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 570, 835, 1205, 1864 |
| NciI | CCSGG | 2 cut(s) | 478, 493 |
| NdeI | CATATG | 1 cut(s) | 1894 |
| NdeII | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| NheI | GCTAGC | 1 cut(s) | 769 |
| NlaIV | GGNNCC | 2 cut(s) | 26, 1453 |
| NmeAIII | GCCGAG | 2 cut(s) | 9, 172 |
| NmuCI | GTSAC | 4 cut(s) | 151, 246, 1525, 1678 |
| NspI | RCATGY | 5 cut(s) | 757, 1270, 1324, 1737, 1756 |
| PaeI | GCATGC | 1 cut(s) | 1737 |
| PagI | TCATGA | 2 cut(s) | 861, 1336 |
| PaqCI | CACCTGC | 1 cut(s) | 440 |
| PceI | AGGCCT | 3 cut(s) | 564, 662, 1048 |
| PciI | ACATGT | 2 cut(s) | 753, 1266 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 404 |
| PfeI | GAWTC | 4 cut(s) | 378, 680, 970, 1883 |
| PflFI | GACNNNGTC | 1 cut(s) | 1150 |
| PkrI | GCNGC | 7 cut(s) | 14, 80, 188, 717, 1101, 1769, 1866 |
| PleI | GAGTC | 4 cut(s) | 907, 1290, 1943, 1962 |
| PpsI | GAGTC | 4 cut(s) | 907, 1290, 1943, 1962 |
| Ppu21I | YACGTR | 4 cut(s) | 530, 852, 1062, 1473 |
| PscI | ACATGT | 2 cut(s) | 753, 1266 |
| PsiI | TTATAA | 1 cut(s) | 729 |
| PspFI | CCCAGC | 2 cut(s) | 1102, 1505 |
| PspN4I | GGNNCC | 2 cut(s) | 26, 1453 |
| PspPI | GGNCC | 3 cut(s) | 130, 514, 1451 |
| PsuI | RGATCY | 1 cut(s) | 1843 |
| PsyI | GACNNNGTC | 1 cut(s) | 1150 |
| PvuII | CAGCTG | 1 cut(s) | 1102 |
| RsaI | GTAC | 6 cut(s) | 98, 854, 1064, 1265, 1370, 1475 |
| RsaNI | GTAC | 6 cut(s) | 97, 853, 1063, 1264, 1369, 1474 |
| RseI | CAYNNNNRTG | 6 cut(s) | 860, 1013, 1200, 1271, 1319, 1419 |
| SacII | CCGCGG | 2 cut(s) | 187, 1308 |
| SaqAI | TTAA | 3 cut(s) | 1641, 1860, 1985 |
| SatI | GCNGC | 7 cut(s) | 13, 79, 187, 716, 1100, 1768, 1865 |
| Sau3AI | GATC | 7 cut(s) | 498, 858, 864, 1252, 1590, 1843, 1959 |
| Sau96I | GGNCC | 3 cut(s) | 130, 514, 1451 |
| SchI | GAGTC | 4 cut(s) | 908, 1291, 1944, 1963 |
| ScrFI | CCNGG | 2 cut(s) | 478, 493 |
| SfaNI | GCATC | 2 cut(s) | 754, 1638 |
| SfcI | CTRYAG | 1 cut(s) | 1684 |
| Sfr303I | CCGCGG | 2 cut(s) | 187, 1308 |
| SgrBI | CCGCGG | 2 cut(s) | 187, 1308 |
| SinI | GGWCC | 1 cut(s) | 514 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 860, 1013, 1200, 1271, 1319, 1419 |
| SmlI | CTYRAG | 4 cut(s) | 1544, 1761, 1811, 1859 |
| SmoI | CTYRAG | 4 cut(s) | 1544, 1761, 1811, 1859 |
| SnaBI | TACGTA | 3 cut(s) | 852, 1062, 1473 |
| SphI | GCATGC | 1 cut(s) | 1737 |
| Sse9I | AATT | 6 cut(s) | 409, 881, 1039, 1187, 1582, 1887 |
| SseBI | AGGCCT | 3 cut(s) | 564, 662, 1048 |
| SspI | AATATT | 1 cut(s) | 1480 |
| SspMI | CTAG | 2 cut(s) | 770, 984 |
| StuI | AGGCCT | 3 cut(s) | 564, 662, 1048 |
| StyD4I | CCNGG | 2 cut(s) | 476, 491 |
| StyI | CCWWGG | 1 cut(s) | 1600 |
| TaaI | ACNGT | 6 cut(s) | 547, 1067, 1378, 1428, 1613, 1808 |
| TaiI | ACGT | 7 cut(s) | 263, 532, 596, 854, 1064, 1181, 1475 |
| TaqI | TCGA | 9 cut(s) | 483, 497, 696, 735, 1133, 1490, 1698, 1746, 1803 |
| TasI | AATT | 6 cut(s) | 409, 881, 1039, 1187, 1582, 1887 |
| TatI | WGTACW | 2 cut(s) | 96, 1368 |
| TauI | GCSGC | 4 cut(s) | 15, 81, 189, 718 |
| TfiI | GAWTC | 4 cut(s) | 378, 680, 970, 1883 |
| Tru1I | TTAA | 3 cut(s) | 1641, 1860, 1985 |
| Tru9I | TTAA | 3 cut(s) | 1641, 1860, 1985 |
| TscAI | CASTG | 5 cut(s) | 106, 583, 1072, 1426, 1845 |
| TseFI | GTSAC | 4 cut(s) | 151, 246, 1525, 1678 |
| TseI | GCWGC | 3 cut(s) | 1099, 1767, 1864 |
| Tsp45I | GTSAC | 4 cut(s) | 151, 246, 1525, 1678 |
| TspDTI | ATGAA | 7 cut(s) | 644, 833, 1325, 1446, 1454, 1575, 1638 |
| TspGWI | ACGGA | 2 cut(s) | 52, 127 |
| TspRI | CASTG | 5 cut(s) | 106, 583, 1072, 1426, 1845 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1150 |
| Vha464I | CTTAAG | 1 cut(s) | 1859 |
| VpaK11BI | GGWCC | 1 cut(s) | 514 |
| XapI | RAATTY | 1 cut(s) | 409 |
| XceI | RCATGY | 5 cut(s) | 757, 1270, 1324, 1737, 1756 |
| XspI | CTAG | 2 cut(s) | 770, 984 |