Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0013399

Physical Location & Seq

Genomic Coordinates Reverse (-)

56149700 .. 56151736

Gene Structure 2037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G034190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGAGACACCGCCGCCACCTGAGACTGGTTCTGGCAATCCCCACGCGCCGCCACTACGCCACAAAATACACCGCCAAAGTAACCTCAACCTCCCCGACCGGCCGCACCCTCTCCGTCGAGGTGACCCCACCACCTCCCCTCCCCACCGACATCCGCGGCTACACTCTCCCCCGCCGCGACCTCGTCTGCAAAGCCACCCAAATCATCCTCCACCAATCCCGCTCCGCCACGTCGGACCCCTTCCTCGACCTCTCCGACTACCTCTCCTCCCTCTCCCTCTCCCTCACCCCCGCCGAAGCCTCCGAGATCCTCAAGTCCCTAAACGACCCCGACCTCGCCTTAAAATTCTTCCGATTCTGCCCCTCCCTTTCCCCCAAATTCCAACACGACGCCTTCAGCTGCAACCGCCTCCTCCTCATCCTCTCCAAGTCCGCCGCCCCCGCCCGCTTCGACCTCGCCCGCTCGATCGTCTCCGACATGCACCGCTCCAACATACGCGGCAACATCTCCACCGTCAATCTCCTCATCGGGCCTCTTCGGCAACACCGACGACCTGGAAACCACCATGGGCCTGTTCAGGCCTTCTTGCGATCCTACAATTCCACCAAGGCCTTCCAGTCCTACATGGAAATGCGTCGCCATGGTCACACAATTGGACATTTACTCTTACCATATGCTGCTGCATGCACTTGCCAAAGACGAAAGGTTGAGCAGGCACACAAGGTGTTTGAAGATATGAAGAGGAAGGATTGCGAGCCGGATGAGTTTACATACACAATCATGATCAGAATGAGTGGGAAATTGGGTAAAGGGGATGAGTGTATGGCGTTTTTTCGGGAATTGTTGAACAAAGGTTGCAATTTGAATTTGATTGTTTATAATACCGTCATTCAGGCTCTTGCTAGGAGCAACATGGTTGATAAGGCGGTCCTTGTGTTTGTGAAAATGGTGGAAGCTGATTGTAGGCCGAATGAGTTTACTTACAGTGTGATTTTGAATCTTTTGGTTGCGCAAGGGCAGCTTGGTAGGTTAGATGAGGTGGTGGAGATGTCGAAGAGATATGTGACTAAGTCTATATACGCGTATCTTGTTAAGACGTTGAGCAAATTGGGTCATGATGATGAAGCCCACCGGCTGTTCTGCAACATGTGGAAATTCCATGACAAGGGGGATCGGGATGCGTACATGTCGATGTTAGAGAGTTTGTGTCTGCAGTGTTGGCCGCTTGGGAGGTTGAAGCAAATATCAAATCTTCATGAAGTGTTTGAAAAGATGAAAAATGATGGCCCTGAACCGGATATATTTACCTACAACATTCTGATTTCCAGCTTTGGTAGGGCTGGGAAGGTTGATGAGGCGATGACAATATTCGAACAGCTTGAGAACAGTGATTGTAAACCTGATATCGTATCTTACAATTCATTGATCAATTGCCTTGGGAAGAATGGTGATGTGGATGAAGCCCACATGAGGTTCAAGGAGATGCAGGAGAAAGGGTTCAGCCCTGATGTTGTCACCTACAGCACTCTAATCGAGTGCTTTGGCAAGACAGATAGGGTTGACATGGCGTGCAGGTTGTTCGATGACATGCTTGCTCAAGGCTGCTGTCCAAACATTGTCACCTACAACATCTTGCTTGATTGTCTTGAGAGGTGTGGGAGGACTGCCGAGGCAGTGGATTTGTATGCAAAACTTAAGCAGCAGGGTTTGACGCCGGATTGGATTACATATTCAGTGCTTGAACGACTGCAAAGTGGTTCTCATAGGAAATTCAGAGTTCGTAGGCAGAGTCCTATCACAGGTTGGGTTGTCAGCCCTATAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

608

Amino Acids

69.31

Weight (kDa)

9.0

Isoelectric Point (pI)

52.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	226 - 357	2.4e-14	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	231 - 264	2.6e-12	PPR repeat family
PPR_3	PF13812	278 - 336	1.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	284 - 317	7e-07	PPR repeat
PPR_2	PF13041	289 - 335	5.3e-12	PPR repeat family
PPR_2	PF13041	413 - 444	5.5e-06	PPR repeat family
PPR_long	PF17177	420 - 582	6.2e-12	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	421 - 482	9.6e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	429 - 460	5.4e-11	PPR repeat
PPR_2	PF13041	432 - 479	6.7e-14	PPR repeat family
PPR	PF01535	435 - 465	4.3e-07	PPR repeat
TPR_24	PF23276	446 - 564	5.3e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	456 - 516	5.1e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	464 - 495	6.5e-10	PPR repeat
PPR_2	PF13041	467 - 515	6.7e-18	PPR repeat family
PPR	PF01535	470 - 500	2.4e-09	PPR repeat
PPR_3	PF13812	492 - 547	3.7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	498 - 530	1e-09	PPR repeat
PPR_2	PF13041	502 - 549	2.4e-16	PPR repeat family
PPR	PF01535	505 - 535	3.5e-06	PPR repeat
PPR_3	PF13812	525 - 580	6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	534 - 561	4.6e-07	PPR repeat
PPR_2	PF13041	537 - 580	4.2e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51965
fragaria_vesca	FvH4_6g32590
malus_domestica	MD09G1200200.v1.1
prunus_persica	Prupe.3G056800_v2.0.a1
pyrus_communis	pycom09g11780 pycom15g36760
rosa_chinensis	RchiOBHm_Chr2g0141041
rosa_laevigata	RLG00000019910
rosa_multiflora	Rmu_sc0004769.1_g000016 Rmu_sc0012897.1_g000006
rosa_roxburghii	Rroxscaffold_2G00104260
rosa_rugosa	Rorug02G0366300
rosa_samantha	Rh2AG417700 Rh2BG427600 Rh2CG404000 Rh2DG437100
rosa_wichuraiana	Rw2G034190 Rw2G034250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	879
Acc16I	TGCGCA	1 cut(s)	1011
Acc36I	ACCTGC	1 cut(s)	1563
AccBSI	CCGCTC	3 cut(s)	222, 462, 486
AccII	CGCG	5 cut(s)	46, 156, 177, 498, 1082
AclWI	GGATC	3 cut(s)	301, 585, 1179
AcoI	YGGCCR	2 cut(s)	100, 1220
AcsI	RAATTY	5 cut(s)	344, 377, 865, 1154, 1769
AcuI	CTGAAG	1 cut(s)	379
AcyI	GRCGYC	2 cut(s)	390, 1712
AdeI	CACNNNGTG	1 cut(s)	724
AfaI	GTAC	1 cut(s)	1184
AfiI	CCNNNNNNNGG	5 cut(s)	25, 1165, 1294, 1470, 1799
AflII	CTTAAG	1 cut(s)	1694
AflIII	ACRYGT	3 cut(s)	1080, 1146, 1185
AgsI	TTSAA	8 cut(s)	731, 847, 865, 997, 1237, 1268, 1477, 1742
AjiI	CACGTC	1 cut(s)	231
AjnI	CCWGG	1 cut(s)	553
AloI	GAACNNNNNNTCC	2 cut(s)	1481, 1513
AluBI	AGCT	5 cut(s)	399, 956, 1021, 1329, 1378
AluI	AGCT	5 cut(s)	399, 956, 1021, 1329, 1378
Alw26I	GTCTC	2 cut(s)	16, 475
AlwI	GGATC	3 cut(s)	301, 585, 1179
AoxI	GGCC	8 cut(s)	100, 530, 569, 579, 609, 965, 1220, 1285
ApeKI	GCWGC	6 cut(s)	399, 677, 680, 1018, 1602, 1699
ApoI	RAATTY	5 cut(s)	344, 377, 865, 1154, 1769
Asp700I	GAANNNNTTC	1 cut(s)	1496
AspLEI	GCGC	2 cut(s)	48, 1012
AspS9I	GGNCC	5 cut(s)	235, 530, 569, 928, 1286
AsuHPI	GGTGA	5 cut(s)	133, 277, 1460, 1507, 1612
AsuII	TTCGAA	1 cut(s)	1371
AvaII	GGWCC	2 cut(s)	235, 928
BbvI	GCAGC	6 cut(s)	386, 664, 667, 1030, 1589, 1711
BccI	CCATC	1 cut(s)	1277
BcgI	CGANNNNNNTGC	4 cut(s)	1513, 1547, 1561, 1595
BciT130I	CCWGG	1 cut(s)	555
BclI	TGATCA	2 cut(s)	783, 1425
BcoDI	GTCTC	2 cut(s)	16, 475
BfaI	CTAG	1 cut(s)	903
BfmI	CTRYAG	2 cut(s)	1211, 1519
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	1 cut(s)	1563
BglI	GCCNNNNNGGC	1 cut(s)	538
Bme1390I	CCNGG	1 cut(s)	555
Bme18I	GGWCC	2 cut(s)	235, 928
BmgBI	CACGTC	1 cut(s)	231
BmgT120I	GGNCC	5 cut(s)	235, 530, 569, 928, 1286
BmiI	GGNNCC	1 cut(s)	237
BmrFI	CCNGG	1 cut(s)	555
BmsI	GCATC	2 cut(s)	1168, 1473
Bpu14I	TTCGAA	1 cut(s)	1371
BpuEI	CTTGAG	4 cut(s)	296, 1400, 1581, 1667
BsaHI	GRCGYC	2 cut(s)	390, 1712
BsaJI	CCNNGG	6 cut(s)	154, 565, 606, 640, 1435, 1668
BsaWI	WCCGGW	1 cut(s)	1294
BsaXI	ACNNNNNCTCC	8 cut(s)	123, 153, 248, 251, 278, 281, 1481, 1511
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 1165, 1294, 1470, 1799
Bse118I	RCCGGY	2 cut(s)	98, 1131
Bse1I	ACTGG	2 cut(s)	30, 616
BseBI	CCWGG	1 cut(s)	555
BseDI	CCNNGG	6 cut(s)	154, 565, 606, 640, 1435, 1668
BseGI	GGATG	7 cut(s)	150, 204, 417, 766, 820, 1183, 1462
BseLI	CCNNNNNNNGG	5 cut(s)	25, 1165, 1294, 1470, 1799
BseMII	CTCAG	1 cut(s)	11
BseNI	ACTGG	2 cut(s)	30, 616
BseRI	GAGGAG	4 cut(s)	256, 401, 404, 512
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	6 cut(s)	386, 664, 667, 1030, 1589, 1711
BseYI	CCCAGC	1 cut(s)	1340
BsgI	GTGCAG	1 cut(s)	1591
Bsh1236I	CGCG	5 cut(s)	46, 156, 177, 498, 1082
Bsh1285I	CGRYCG	3 cut(s)	99, 103, 468
BshFI	GGCC	8 cut(s)	102, 532, 571, 581, 611, 967, 1222, 1287
BsiEI	CGRYCG	3 cut(s)	99, 103, 468
BsiSI	CCGG	5 cut(s)	99, 758, 1132, 1295, 1715
BslFI	GGGAC	1 cut(s)	301
BslI	CCNNNNNNNGG	5 cut(s)	25, 1165, 1294, 1470, 1799
BsmAI	GTCTC	2 cut(s)	16, 475
BsmBI	CGTCTC	1 cut(s)	475
BsmFI	GGGAC	1 cut(s)	301
BsnI	GGCC	8 cut(s)	102, 532, 571, 581, 611, 967, 1222, 1287
Bsp119I	TTCGAA	1 cut(s)	1371
Bsp143I	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
Bsp19I	CCATGG	2 cut(s)	565, 640
BspANI	GGCC	8 cut(s)	102, 532, 571, 581, 611, 967, 1222, 1287
BspCNI	CTCAG	1 cut(s)	12
BspFNI	CGCG	5 cut(s)	46, 156, 177, 498, 1082
BspHI	TCATGA	3 cut(s)	780, 1114, 1255
BspLI	GGNNCC	1 cut(s)	237
BspMAI	CTGCAG	1 cut(s)	1215
BspMI	ACCTGC	1 cut(s)	1563
BspPI	GGATC	3 cut(s)	301, 585, 1179
BspT104I	TTCGAA	1 cut(s)	1371
BspTI	CTTAAG	1 cut(s)	1694
BsrBI	CCGCTC	3 cut(s)	222, 462, 486
BsrFI	RCCGGY	2 cut(s)	98, 1131
BsrI	ACTGG	2 cut(s)	30, 616
BssAI	RCCGGY	2 cut(s)	98, 1131
BssECI	CCNNGG	6 cut(s)	154, 565, 606, 640, 1435, 1668
BssMI	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
BssNI	GRCGYC	2 cut(s)	390, 1712
BssT1I	CCWWGG	4 cut(s)	565, 606, 640, 1435
Bst2UI	CCWGG	1 cut(s)	555
Bst4CI	ACNGT	4 cut(s)	514, 886, 986, 1388
Bst6I	CTCTTC	3 cut(s)	540, 734, 1049
BstACI	GRCGYC	2 cut(s)	390, 1712
BstAFI	CTTAAG	1 cut(s)	1694
BstBI	TTCGAA	1 cut(s)	1371
BstC8I	GCNNGC	7 cut(s)	445, 460, 685, 714, 755, 1570, 1593
BstDEI	CTNAG	2 cut(s)	20, 1068
BstDSI	CCRYGG	3 cut(s)	154, 565, 640
BstEII	GGTNACC	1 cut(s)	121
BstENI	CCTNNNNNAGG	1 cut(s)	1797
BstF5I	GGATG	7 cut(s)	150, 204, 417, 766, 820, 1183, 1462
BstFNI	CGCG	5 cut(s)	46, 156, 177, 498, 1082
BstHHI	GCGC	2 cut(s)	48, 1012
BstKTI	GATC	6 cut(s)	309, 468, 593, 786, 1174, 1428
BstMAI	GTCTC	2 cut(s)	16, 475
BstMBI	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
BstMCI	CGRYCG	3 cut(s)	99, 103, 468
BstMWI	GCNNNNNNNGC	5 cut(s)	405, 440, 538, 1018, 1219
BstNI	CCWGG	1 cut(s)	555
BstNSI	RCATGY	5 cut(s)	481, 687, 1150, 1189, 1591
BstPI	GGTNACC	1 cut(s)	121
BstSCI	CCNGG	1 cut(s)	553
BstSFI	CTRYAG	2 cut(s)	1211, 1519
BstUI	CGCG	5 cut(s)	46, 156, 177, 498, 1082
BstV1I	GCAGC	6 cut(s)	386, 664, 667, 1030, 1589, 1711
BstX2I	RGATCY	1 cut(s)	306
BstYI	RGATCY	1 cut(s)	306
BstZI	CGGCCG	1 cut(s)	100
BsuRI	GGCC	8 cut(s)	102, 532, 571, 581, 611, 967, 1222, 1287
BtgI	CCRYGG	3 cut(s)	154, 565, 640
BtgZI	GCGATG	1 cut(s)	1373
BtrI	CACGTC	1 cut(s)	231
BtsCI	GGATG	7 cut(s)	150, 204, 417, 766, 820, 1183, 1462
BtsI	GCAGTG	2 cut(s)	1220, 1680
BtsIMutI	CAGTG	5 cut(s)	991, 1220, 1393, 1680, 1740
BveI	ACCTGC	1 cut(s)	1563
Cac8I	GCNNGC	7 cut(s)	445, 460, 685, 714, 755, 1570, 1593
CciI	TCATGA	3 cut(s)	780, 1114, 1255
CfoI	GCGC	2 cut(s)	48, 1012
Cfr10I	RCCGGY	2 cut(s)	98, 1131
Cfr13I	GGNCC	5 cut(s)	235, 530, 569, 928, 1286
Cfr42I	CCGCGG	1 cut(s)	157
CseI	GACGC	3 cut(s)	398, 623, 1720
Csp6I	GTAC	1 cut(s)	1183
CviQI	GTAC	1 cut(s)	1183
DdeI	CTNAG	2 cut(s)	20, 1068
DpnI	GATC	6 cut(s)	308, 467, 592, 785, 1173, 1427
DpnII	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
DraIII	CACNNNGTG	1 cut(s)	724
EaeI	YGGCCR	2 cut(s)	100, 1220
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	3 cut(s)	540, 734, 1049
EarI	CTCTTC	3 cut(s)	540, 734, 1049
EciI	GGCGGA	2 cut(s)	214, 421
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	4 cut(s)	565, 606, 640, 1435
Eco147I	AGGCCT	2 cut(s)	581, 611
Eco32I	GATATC	1 cut(s)	1405
Eco47I	GGWCC	2 cut(s)	235, 928
Eco52I	CGGCCG	1 cut(s)	100
Eco57I	CTGAAG	1 cut(s)	379
Eco91I	GGTNACC	1 cut(s)	121
EcoNI	CCTNNNNNAGG	1 cut(s)	1797
EcoO65I	GGTNACC	1 cut(s)	121
EcoRII	CCWGG	1 cut(s)	553
EcoRV	GATATC	1 cut(s)	1405
EcoT14I	CCWWGG	4 cut(s)	565, 606, 640, 1435
ErhI	CCWWGG	4 cut(s)	565, 606, 640, 1435
Esp3I	CGTCTC	1 cut(s)	475
FalI	AAGNNNNNCTT	2 cut(s)	1005, 1037
FaqI	GGGAC	1 cut(s)	301
FauI	CCCGC	6 cut(s)	179, 227, 298, 448, 452, 467
FauNDI	CATATG	1 cut(s)	673
FbaI	TGATCA	2 cut(s)	783, 1425
FokI	GGATG	7 cut(s)	137, 191, 404, 773, 827, 1190, 1469
FspBI	CTAG	1 cut(s)	903
FspI	TGCGCA	1 cut(s)	1011
GlaI	GCGC	2 cut(s)	47, 1011
GsaI	CCCAGC	1 cut(s)	1344
HaeIII	GGCC	8 cut(s)	102, 532, 571, 581, 611, 967, 1222, 1287
HapII	CCGG	5 cut(s)	99, 758, 1132, 1295, 1715
HgaI	GACGC	3 cut(s)	398, 623, 1720
HhaI	GCGC	2 cut(s)	48, 1012
Hin1I	GRCGYC	2 cut(s)	390, 1712
Hin6I	GCGC	2 cut(s)	46, 1010
HinP1I	GCGC	2 cut(s)	46, 1010
HincII	GTYRAC	1 cut(s)	1561
HindII	GTYRAC	1 cut(s)	1561
HinfI	GANTC	3 cut(s)	354, 997, 1789
HpaII	CCGG	5 cut(s)	99, 758, 1132, 1295, 1715
HphI	GGTGA	5 cut(s)	133, 277, 1460, 1507, 1612
Hpy166II	GTNNAC	4 cut(s)	768, 978, 1397, 1561
Hpy188I	TCNGA	8 cut(s)	235, 256, 304, 353, 475, 788, 1320, 1775
Hpy188III	TCNNGA	6 cut(s)	781, 836, 1115, 1175, 1256, 1646
Hpy8I	GTNNAC	4 cut(s)	768, 978, 1397, 1561
Hpy99I	CGWCG	5 cut(s)	119, 235, 392, 552, 639
HpyAV	CCTTC	6 cut(s)	250, 403, 592, 622, 739, 1339
HpyCH4III	ACNGT	4 cut(s)	514, 886, 986, 1388
HpyCH4IV	ACGT	2 cut(s)	230, 1097
HpyF10VI	GCNNNNNNNGC	5 cut(s)	405, 440, 538, 1018, 1219
HpyF3I	CTNAG	2 cut(s)	20, 1068
HpySE526I	ACGT	2 cut(s)	230, 1097
Hsp92I	GRCGYC	2 cut(s)	390, 1712
HspAI	GCGC	2 cut(s)	46, 1010
Ksp22I	TGATCA	2 cut(s)	783, 1425
KspI	CCGCGG	1 cut(s)	157
Kzo9I	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
LmnI	GCTCC	3 cut(s)	227, 491, 906
Lsp1109I	GCAGC	6 cut(s)	386, 664, 667, 1030, 1589, 1711
LweI	GCATC	2 cut(s)	1168, 1473
MaeI	CTAG	1 cut(s)	903
MaeII	ACGT	2 cut(s)	230, 1097
MaeIII	GTNAC	6 cut(s)	79, 121, 644, 1063, 1513, 1618
MalI	GATC	6 cut(s)	308, 467, 592, 785, 1173, 1427
MbiI	CCGCTC	3 cut(s)	222, 462, 486
MboI	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
MboII	GAAGA	7 cut(s)	340, 527, 743, 751, 1066, 1244, 1453
MfeI	CAATTG	2 cut(s)	651, 1429
MflI	RGATCY	1 cut(s)	306
MluI	ACGCGT	1 cut(s)	1080
MlyI	GAGTC	1 cut(s)	1798
MmeI	TCCRAC	5 cut(s)	213, 279, 406, 498, 513
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	3 cut(s)	341, 1092, 1695
MslI	CAYNNNNRTG	4 cut(s)	629, 779, 1119, 1190
MspA1I	CMGCKG	2 cut(s)	156, 399
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	5 cut(s)	99, 758, 1132, 1295, 1715
MspR9I	CCNGG	1 cut(s)	555
MunI	CAATTG	2 cut(s)	651, 1429
MvaI	CCWGG	1 cut(s)	555
MvnI	CGCG	5 cut(s)	46, 156, 177, 498, 1082
MwoI	GCNNNNNNNGC	5 cut(s)	405, 440, 538, 1018, 1219
NcoI	CCATGG	2 cut(s)	565, 640
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
NlaIV	GGNNCC	1 cut(s)	237
NmeAIII	GCCGAG	1 cut(s)	1693
NmuCI	GTSAC	5 cut(s)	121, 644, 1063, 1513, 1618
NsbI	TGCGCA	1 cut(s)	1011
NspI	RCATGY	5 cut(s)	481, 687, 1150, 1189, 1591
NspV	TTCGAA	1 cut(s)	1371
PaeI	GCATGC	1 cut(s)	687
PagI	TCATGA	3 cut(s)	780, 1114, 1255
PceI	AGGCCT	2 cut(s)	581, 611
PciI	ACATGT	2 cut(s)	1146, 1185
PcsI	WCGNNNNNNNCGW	2 cut(s)	252, 544
PdmI	GAANNNNTTC	1 cut(s)	1496
PfeI	GAWTC	2 cut(s)	354, 997
PflFI	GACNNNGTC	2 cut(s)	182, 1069
Ple19I	CGATCG	1 cut(s)	468
PleI	GAGTC	1 cut(s)	1797
PpsI	GAGTC	1 cut(s)	1797
PscI	ACATGT	2 cut(s)	1146, 1185
PsiI	TTATAA	1 cut(s)	879
Psp6I	CCWGG	1 cut(s)	553
PspEI	GGTNACC	1 cut(s)	121
PspFI	CCCAGC	1 cut(s)	1340
PspGI	CCWGG	1 cut(s)	553
PspN4I	GGNNCC	1 cut(s)	237
PspPI	GGNCC	5 cut(s)	235, 530, 569, 928, 1286
PstI	CTGCAG	1 cut(s)	1215
PsuI	RGATCY	1 cut(s)	306
PsyI	GACNNNGTC	2 cut(s)	182, 1069
PvuI	CGATCG	1 cut(s)	468
PvuII	CAGCTG	1 cut(s)	399
RsaI	GTAC	1 cut(s)	1184
RsaNI	GTAC	1 cut(s)	1183
RseI	CAYNNNNRTG	4 cut(s)	629, 779, 1119, 1190
SacII	CCGCGG	1 cut(s)	157
SaqAI	TTAA	3 cut(s)	341, 1092, 1695
Sau3AI	GATC	6 cut(s)	306, 465, 590, 783, 1171, 1425
Sau96I	GGNCC	5 cut(s)	235, 530, 569, 928, 1286
SchI	GAGTC	1 cut(s)	1798
ScrFI	CCNGG	1 cut(s)	555
SfaNI	GCATC	2 cut(s)	1168, 1473
SfcI	CTRYAG	2 cut(s)	1211, 1519
Sfr303I	CCGCGG	1 cut(s)	157
SfuI	TTCGAA	1 cut(s)	1371
SgrBI	CCGCGG	1 cut(s)	157
SinI	GGWCC	2 cut(s)	235, 928
SmiMI	CAYNNNNRTG	4 cut(s)	629, 779, 1119, 1190
SmlI	CTYRAG	5 cut(s)	311, 1379, 1596, 1646, 1694
SmoI	CTYRAG	5 cut(s)	311, 1379, 1596, 1646, 1694
SphI	GCATGC	1 cut(s)	687
SseBI	AGGCCT	2 cut(s)	581, 611
SspI	AATATT	1 cut(s)	1368
SspMI	CTAG	1 cut(s)	903
StuI	AGGCCT	2 cut(s)	581, 611
StyD4I	CCNGG	1 cut(s)	553
StyI	CCWWGG	4 cut(s)	565, 606, 640, 1435
TaaI	ACNGT	4 cut(s)	514, 886, 986, 1388
TaiI	ACGT	2 cut(s)	233, 1100
TaqI	TCGA	9 cut(s)	117, 246, 450, 464, 1052, 1190, 1371, 1533, 1581
TauI	GCSGC	8 cut(s)	15, 51, 105, 159, 177, 437, 501, 1225
TfiI	GAWTC	2 cut(s)	354, 997
Tru1I	TTAA	3 cut(s)	341, 1092, 1695
Tru9I	TTAA	3 cut(s)	341, 1092, 1695
TscAI	CASTG	5 cut(s)	991, 1220, 1393, 1680, 1740
TseFI	GTSAC	5 cut(s)	121, 644, 1063, 1513, 1618
TseI	GCWGC	6 cut(s)	399, 677, 680, 1018, 1602, 1699
Tsp45I	GTSAC	5 cut(s)	121, 644, 1063, 1513, 1618
TspDTI	ATGAA	7 cut(s)	752, 1137, 1244, 1272, 1289, 1410, 1473
TspGWI	ACGGA	1 cut(s)	103
TspRI	CASTG	5 cut(s)	991, 1220, 1393, 1680, 1740
Tth111I	GACNNNGTC	2 cut(s)	182, 1069
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	2 cut(s)	235, 928
XagI	CCTNNNNNAGG	1 cut(s)	1797
XapI	RAATTY	5 cut(s)	344, 377, 865, 1154, 1769
XceI	RCATGY	5 cut(s)	481, 687, 1150, 1189, 1591
XmnI	GAANNNNTTC	1 cut(s)	1496
XspI	CTAG	1 cut(s)	903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.