FvH4_6g34220

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0009631
Physical Location & Seq
Forward (+)
26997430 .. 27000365
2936 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g34220.t1

Sequence Viewer

Length: 1695 bp
ATGGAAGAAGACGAAGACACGTTTTCGCCGTTCTGGCTCCCCAGCACTCCCCGCCGCCGTCTCCGCCGCTCCTCCTCCTCTCTTCTCTTCAGCTCCGGCGCCTTCGTCCTCCTCCTCCTCGCCGTAGCTCTAGCCTTCATTTTTGTCATAATCCCTTCTGTACATTCCTTTACATCTCAGATTTTCAGACCCAACATGGTGAAGAAGAGCTGGGACTCCCTCAACTTGGTCCTCGTCCTCTTCGCCATTGTCTGCGGCTTTCTCGGCAGAAACACCGCCGGCAACGACGACGGCGGCGTTTCGGTTAGTGCTGCTGCTCAGCCGGAAGAGGTGGTCAAGTCTGTCCCGTCAACGCCGCGCCAGTGGTACGAGTATTCAGATCGGACGGTGTATAATGATCATCGTGGTGTTAACAGAGTGAGCTCCATGAGAAGCAGCAGCTCGTACCCGGATCTCCGACAAGACTCCGATTGGGTCGCCAGAGATGACAGGTGGCGATTCTACGACGATACCCACGTCAGCAACTACCGTGTTCCGGACTCCGGTCAGGTCCAGCGACACCGCCGTCGGGCGTCGTGGCATGAAGAGTATGATGTCACTCGCACCAAGAATATTCCGGTGGACACTTTTGTGGTCCGTACAGAACAAGCTTCACCATCATCTACACCAAAAGCTGCTGTTTCTGTTTCTCCGCCGCATGAGGTGGCGCCGCCGCGTAAGTCGAAGAGGACGTACCAAGCTGTGGGGGAGAAAGAGACAAGAAATGATGATTTGGAGGTCAAGAGTAGTAGTTTCAGACAACCGCCGCCGGTACCTGCCTCACAATCGCCACCGAAACCGGCGGCATTGCCGGTGTATGAAGAAGTAGCGGAGGTAAAGAGTCAAAAGAGAGAGAAGAATGTGAAGAAAAGAGGAGTTGCAACTACAAAAGAGTTCTTGATCACTTCACTGAGGGGGAAGAAGAAGAGGCAGAGACAAAAGAGTGTCGAAAACTTCGAAACTCTACTCAACTCCGCCACTGCTTCTTCTTCTTCAATGCCACTACATCCACCGCCGTCGCCGCCACCTCCGCCACCTCCGCCACCTCCACCGCCGCCGCCGCCGTCAGTCTTCCACAGCTTGTTTCAATCAAAGAAACCAAAACCCAAAAAATCTCATCACTCAGTTTCACACTCACCACCCCCGCCGCCGTCTCCGCCGGTCACTTCCGCCGCTCGAATGTCGAGGACCAAGGCCCAAGTCAGGCCCACGATGACGGCGCAGAAGCCGCCATTGCCGGTGAAGGTGAAGAGCTTCAACATTGTAGAAGATGAAGCAGCAAACAGCGGAGGAGACTCCCCACTAATGTCTCGCATTCCGCCACCGCCGCCGTTGCCGCCGTTTAGAATGCCGGAGCTGAAGTTCGTTGTGCACGGAGACTTTGTTAGAATCAAAAGCAACAACAGCTCAAGAAGTGGGTCGCCGGATTTTGACGATGAAGGTGAGGATTCGCCGACCAATGAGAGTAGCCCGTTGAGTGGAAATGAGTCGCCGGCGAGACCAGTATTCTGTCCGAGCCCAGATGTGAACACGAAAGCTGATACCTTCATAGCGAGGTTCAGAGCCGGTCTGAGGTTGGAGAAGATCAACTCTGTGAATGAGAGAGGGAGGTCTAATTTGGGCCCGGGTTCGACTGAAAGATTAGGCCCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04062 ko04144 ko04520 ko04530 ko04666 ko04810 ko05100 ko05130 ko05131 ko05132 ko05231 map04062 map04144 map04520 map04530 map04666 map04810 map05100 map05130 map05131 map05132 map05231
Pfam Domains
Protein Families
DUF761

Protein Analysis

565

Amino Acids

62.44

Weight (kDa)

9.87

Isoelectric Point (pI)

73.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 520 - 546 1.3e-06 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 564
Acc36I ACCTGC 1 cut(s) 823
Acc65I GGTACC 1 cut(s) 811
AccB1I GGYRCC 3 cut(s) 98, 706, 811
AccB7I CCANNNNNTGG 1 cut(s) 742
AccBSI CCGCTC 2 cut(s) 69, 1214
AccII CGCG 2 cut(s) 358, 715
AccIII TCCGGA 1 cut(s) 535
AclWI GGATC 1 cut(s) 459
AcuI CTGAAG 2 cut(s) 73, 1418
AcyI GRCGYC 3 cut(s) 99, 572, 707
AfaI GTAC 6 cut(s) 162, 368, 446, 640, 734, 813
AfiI CCNNNNNNNGG 8 cut(s) 226, 535, 542, 568, 742, 1242, 1517, 1611
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 3 cut(s) 1035, 1127, 1297
AjiI CACGTC 1 cut(s) 517
AleI CACNNNNGTG 1 cut(s) 629
AloI GAACNNNNNNTCC 2 cut(s) 1385, 1417
Alw21I GWGCWC 2 cut(s) 425, 1413
Alw26I GTCTC 8 cut(s) 65, 749, 967, 1197, 1326, 1353, 1410, 1531
Alw44I GTGCAC 1 cut(s) 1409
AlwI GGATC 1 cut(s) 459
Ama87I CYCGRG 1 cut(s) 1663
Aor13HI TCCGGA 1 cut(s) 535
AoxI GGCC 4 cut(s) 1233, 1244, 1660, 1684
ApaI GGGCCC 1 cut(s) 1664
ApaLI GTGCAC 1 cut(s) 1409
ApeKI GCWGC 6 cut(s) 311, 314, 435, 438, 674, 1316
Asp700I GAANNNNTTC 1 cut(s) 1292
Asp718I GGTACC 1 cut(s) 811
AspLEI GCGC 4 cut(s) 101, 360, 709, 1261
AspS9I GGNCC 9 cut(s) 229, 550, 634, 1227, 1234, 1245, 1660, 1661, 1685
AsuC2I CCSGG 3 cut(s) 449, 1664, 1665
AsuHPI GGTGA 6 cut(s) 211, 645, 1167, 1291, 1297, 1493
AsuII TTCGAA 1 cut(s) 996
AvaI CYCGRG 1 cut(s) 1663
AvaII GGWCC 4 cut(s) 229, 550, 634, 1227
BaeGI GKGCMC 2 cut(s) 1413, 1664
BaeI ACNNNNGTAYC 2 cut(s) 501, 534
BanI GGYRCC 3 cut(s) 98, 706, 811
BanII GRGCYC 3 cut(s) 425, 1559, 1664
BarI GAAGNNNNNNTAC 2 cut(s) 716, 748
BbsI GAAGAC 3 cut(s) 15, 21, 1102
Bbv12I GWGCWC 2 cut(s) 425, 1413
BbvI GCAGC 6 cut(s) 298, 301, 447, 450, 661, 1328
BccI CCATC 1 cut(s) 664
BclI TGATCA 2 cut(s) 397, 939
BcnI CCSGG 3 cut(s) 449, 1664, 1665
BcoDI GTCTC 8 cut(s) 65, 749, 967, 1197, 1326, 1353, 1410, 1531
BfaI CTAG 1 cut(s) 131
BfoI RGCGCY 2 cut(s) 102, 710
BfuAI ACCTGC 1 cut(s) 823
BglI GCCNNNNNGGC 1 cut(s) 34
BlpI GCTNAGC 1 cut(s) 318
Bme1390I CCNGG 3 cut(s) 449, 1664, 1665
Bme18I GGWCC 4 cut(s) 229, 550, 634, 1227
BmeT110I CYCGRG 1 cut(s) 1663
BmgBI CACGTC 1 cut(s) 517
BmgT120I GGNCC 9 cut(s) 229, 550, 634, 1227, 1234, 1245, 1660, 1661, 1685
BmiI GGNNCC 5 cut(s) 38, 100, 708, 813, 1662
BmrFI CCNGG 3 cut(s) 449, 1664, 1665
BoxI GACNNNNGTC 1 cut(s) 543
BpiI GAAGAC 3 cut(s) 15, 21, 1102
Bpu1102I GCTNAGC 1 cut(s) 318
Bpu14I TTCGAA 1 cut(s) 996
BpuEI CTTGAG 1 cut(s) 1432
BpuMI CCSGG 3 cut(s) 449, 1664, 1665
BsaHI GRCGYC 3 cut(s) 99, 572, 707
BsaI GGTCTC 1 cut(s) 1531
BsaJI CCNNGG 2 cut(s) 1230, 1663
BsaWI WCCGGW 3 cut(s) 535, 542, 616
BsaXI ACNNNNNCTCC 4 cut(s) 1385, 1407, 1415, 1437
Bsc4I CCNNNNNNNGG 8 cut(s) 226, 535, 542, 568, 742, 1242, 1517, 1611
Bse118I RCCGGY 8 cut(s) 278, 808, 838, 850, 1198, 1276, 1531, 1604
Bse1I ACTGG 2 cut(s) 361, 1541
Bse3DI GCAATG 2 cut(s) 845, 1271
BseAI TCCGGA 1 cut(s) 535
BseDI CCNNGG 2 cut(s) 1230, 1663
BseGI GGATG 1 cut(s) 1045
BseLI CCNNNNNNNGG 8 cut(s) 226, 535, 542, 568, 742, 1242, 1517, 1611
BseMI GCAATG 2 cut(s) 845, 1271
BseMII CTCAG 5 cut(s) 191, 332, 941, 1176, 1601
BseNI ACTGG 2 cut(s) 361, 1541
BseRI GAGGAG 8 cut(s) 61, 64, 67, 101, 104, 107, 927, 1344
BseSI GKGCMC 2 cut(s) 1413, 1664
BseXI GCAGC 6 cut(s) 298, 301, 447, 450, 661, 1328
BseYI CCCAGC 2 cut(s) 41, 210
Bsh1236I CGCG 2 cut(s) 358, 715
BshFI GGCC 4 cut(s) 1235, 1246, 1662, 1686
BshNI GGYRCC 3 cut(s) 98, 706, 811
BsiHKAI GWGCWC 2 cut(s) 425, 1413
BsiHKCI CYCGRG 1 cut(s) 1663
BslFI GGGAC 2 cut(s) 227, 329
BslI CCNNNNNNNGG 8 cut(s) 226, 535, 542, 568, 742, 1242, 1517, 1611
BsmAI GTCTC 8 cut(s) 65, 749, 967, 1197, 1326, 1353, 1410, 1531
BsmBI CGTCTC 2 cut(s) 65, 1197
BsmFI GGGAC 2 cut(s) 227, 329
BsmI GAATGC 2 cut(s) 1353, 1392
BsnI GGCC 4 cut(s) 1235, 1246, 1662, 1686
Bso31I GGTCTC 1 cut(s) 1531
BsoBI CYCGRG 1 cut(s) 1663
Bsp119I TTCGAA 1 cut(s) 996
Bsp120I GGGCCC 1 cut(s) 1660
Bsp1286I GDGCHC 4 cut(s) 425, 1413, 1559, 1664
Bsp13I TCCGGA 1 cut(s) 535
Bsp1407I TGTACA 1 cut(s) 160
Bsp143I GATC 5 cut(s) 379, 397, 451, 939, 1623
Bsp1720I GCTNAGC 1 cut(s) 318
BspANI GGCC 4 cut(s) 1235, 1246, 1662, 1686
BspCNI CTCAG 5 cut(s) 190, 331, 942, 1175, 1602
BspEI TCCGGA 1 cut(s) 535
BspFNI CGCG 2 cut(s) 358, 715
BspLI GGNNCC 5 cut(s) 38, 100, 708, 813, 1662
BspMI ACCTGC 1 cut(s) 823
BspPI GGATC 1 cut(s) 459
BspQI GCTCTTC 2 cut(s) 200, 1283
BspT104I TTCGAA 1 cut(s) 996
BspT107I GGYRCC 3 cut(s) 98, 706, 811
BspTNI GGTCTC 1 cut(s) 1531
BsrBI CCGCTC 2 cut(s) 69, 1214
BsrDI GCAATG 2 cut(s) 845, 1271
BsrFI RCCGGY 8 cut(s) 278, 808, 838, 850, 1198, 1276, 1531, 1604
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 2 cut(s) 361, 1541
BssAI RCCGGY 8 cut(s) 278, 808, 838, 850, 1198, 1276, 1531, 1604
BssECI CCNNGG 2 cut(s) 1230, 1663
BssMI GATC 5 cut(s) 379, 397, 451, 939, 1623
BssNI GRCGYC 3 cut(s) 99, 572, 707
BssT1I CCWWGG 1 cut(s) 1230
Bst4CI ACNGT 2 cut(s) 388, 530
Bst6I CTCTTC 9 cut(s) 87, 92, 200, 245, 321, 579, 719, 959, 1283
BstACI GRCGYC 3 cut(s) 99, 572, 707
BstAUI TGTACA 1 cut(s) 160
BstBI TTCGAA 1 cut(s) 996
BstC8I GCNNGC 2 cut(s) 280, 1533
BstDEI CTNAG 5 cut(s) 177, 318, 950, 1162, 1610
BstF5I GGATG 1 cut(s) 1045
BstFNI CGCG 2 cut(s) 358, 715
BstH2I RGCGCY 2 cut(s) 102, 710
BstHHI GCGC 4 cut(s) 101, 360, 709, 1261
BstKTI GATC 5 cut(s) 382, 400, 454, 942, 1626
BstMAI GTCTC 8 cut(s) 65, 749, 967, 1197, 1326, 1353, 1410, 1531
BstMBI GATC 5 cut(s) 379, 397, 451, 939, 1623
BstPAI GACNNNNGTC 1 cut(s) 543
BstSCI CCNGG 3 cut(s) 447, 1662, 1663
BstSLI GKGCMC 2 cut(s) 1413, 1664
BstUI CGCG 2 cut(s) 358, 715
BstV1I GCAGC 6 cut(s) 298, 301, 447, 450, 661, 1328
BstV2I GAAGAC 3 cut(s) 15, 21, 1102
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BsuRI GGCC 4 cut(s) 1235, 1246, 1662, 1686
BtrI CACGTC 1 cut(s) 517
BtsCI GGATG 1 cut(s) 1045
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 3 cut(s) 368, 947, 1017
BveI ACCTGC 1 cut(s) 823
Cac8I GCNNGC 2 cut(s) 280, 1533
CfoI GCGC 4 cut(s) 101, 360, 709, 1261
Cfr10I RCCGGY 8 cut(s) 278, 808, 838, 850, 1198, 1276, 1531, 1604
Cfr13I GGNCC 9 cut(s) 229, 550, 634, 1227, 1234, 1245, 1660, 1661, 1685
Cfr9I CCCGGG 1 cut(s) 1663
CseI GACGC 1 cut(s) 561
Csp6I GTAC 6 cut(s) 161, 367, 445, 639, 733, 812
CviAII CATG 4 cut(s) 196, 427, 581, 698
CviQI GTAC 6 cut(s) 161, 367, 445, 639, 733, 812
DdeI CTNAG 5 cut(s) 177, 318, 950, 1162, 1610
DinI GGCGCC 2 cut(s) 100, 708
DpnI GATC 5 cut(s) 381, 399, 453, 941, 1625
DpnII GATC 5 cut(s) 379, 397, 451, 939, 1623
DrdI GACNNNNNNGTC 1 cut(s) 564
DseDI GACNNNNNNGTC 1 cut(s) 564
Eam1104I CTCTTC 9 cut(s) 87, 92, 200, 245, 321, 579, 719, 959, 1283
EarI CTCTTC 9 cut(s) 87, 92, 200, 245, 321, 579, 719, 959, 1283
EciI GGCGGA 8 cut(s) 53, 681, 1003, 1059, 1068, 1185, 1198, 1347
Ecl136II GAGCTC 1 cut(s) 423
Eco130I CCWWGG 1 cut(s) 1230
Eco24I GRGCYC 3 cut(s) 425, 1559, 1664
Eco31I GGTCTC 1 cut(s) 1531
Eco47I GGWCC 4 cut(s) 229, 550, 634, 1227
Eco53kI GAGCTC 1 cut(s) 423
Eco57I CTGAAG 2 cut(s) 73, 1418
Eco88I CYCGRG 1 cut(s) 1663
EcoICRI GAGCTC 1 cut(s) 423
EcoT14I CCWWGG 1 cut(s) 1230
EcoT38I GRGCYC 3 cut(s) 425, 1559, 1664
EgeI GGCGCC 2 cut(s) 100, 708
EheI GGCGCC 2 cut(s) 100, 708
ErhI CCWWGG 1 cut(s) 1230
Esp3I CGTCTC 2 cut(s) 65, 1197
FaeI CATG 4 cut(s) 199, 430, 584, 701
FaiI YATR 9 cut(s) 149, 197, 393, 428, 582, 591, 699, 858, 1589
FaqI GGGAC 2 cut(s) 227, 329
FatI CATG 4 cut(s) 195, 426, 580, 697
FauI CCCGC 2 cut(s) 59, 1191
FbaI TGATCA 2 cut(s) 397, 939
FokI GGATG 1 cut(s) 1032
FriOI GRGCYC 3 cut(s) 425, 1559, 1664
FspBI CTAG 1 cut(s) 131
GlaI GCGC 4 cut(s) 100, 359, 708, 1260
GsaI CCCAGC 2 cut(s) 45, 214
HaeII RGCGCY 2 cut(s) 102, 710
HaeIII GGCC 4 cut(s) 1235, 1246, 1662, 1686
HgaI GACGC 1 cut(s) 561
HhaI GCGC 4 cut(s) 101, 360, 709, 1261
Hin1I GRCGYC 3 cut(s) 99, 572, 707
Hin1II CATG 4 cut(s) 199, 430, 584, 701
Hin6I GCGC 4 cut(s) 99, 358, 707, 1259
HinP1I GCGC 4 cut(s) 99, 358, 707, 1259
HincII GTYRAC 2 cut(s) 351, 412
HindII GTYRAC 2 cut(s) 351, 412
HindIII AAGCTT 1 cut(s) 648
HinfI GANTC 9 cut(s) 215, 464, 498, 539, 880, 1334, 1428, 1487, 1526
HpaI GTTAAC 1 cut(s) 412
HphI GGTGA 6 cut(s) 211, 645, 1167, 1291, 1297, 1493
Hpy166II GTNNAC 5 cut(s) 351, 412, 622, 1411, 1567
Hpy188III TCNNGA 4 cut(s) 536, 781, 937, 1449
Hpy8I GTNNAC 5 cut(s) 351, 412, 622, 1411, 1567
Hpy99I CGWCG 6 cut(s) 290, 293, 509, 570, 577, 1060
HpyAV CCTTC 6 cut(s) 112, 145, 165, 1276, 1472, 1594
HpyCH4III ACNGT 2 cut(s) 388, 530
HpyCH4IV ACGT 3 cut(s) 20, 516, 731
HpyCH4V TGCA 2 cut(s) 920, 1411
HpyF3I CTNAG 5 cut(s) 177, 318, 950, 1162, 1610
HpySE526I ACGT 3 cut(s) 20, 516, 731
Hsp92I GRCGYC 3 cut(s) 99, 572, 707
Hsp92II CATG 4 cut(s) 199, 430, 584, 701
HspAI GCGC 4 cut(s) 99, 358, 707, 1259
KasI GGCGCC 2 cut(s) 98, 706
Kpn2I TCCGGA 1 cut(s) 535
KpnI GGTACC 1 cut(s) 815
KroI GCCGGC 2 cut(s) 278, 1531
KroNI GCCGGC 2 cut(s) 280, 1533
Ksp22I TGATCA 2 cut(s) 397, 939
KspAI GTTAAC 1 cut(s) 412
Kzo9I GATC 5 cut(s) 379, 397, 451, 939, 1623
LguI GCTCTTC 2 cut(s) 200, 1283
LmnI GCTCC 5 cut(s) 42, 74, 98, 428, 1393
Lsp1109I GCAGC 6 cut(s) 298, 301, 447, 450, 661, 1328
MaeI CTAG 1 cut(s) 131
MaeII ACGT 3 cut(s) 20, 516, 731
MaeIII GTNAC 2 cut(s) 595, 1201
MalI GATC 5 cut(s) 381, 399, 453, 941, 1625
MbiI CCGCTC 2 cut(s) 69, 1214
MboI GATC 5 cut(s) 379, 397, 451, 939, 1623
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 4 cut(s) 425, 1413, 1559, 1664
MluCI AATT 2 cut(s) 1654, 1689
Mly113I GGCGCC 2 cut(s) 99, 707
MlyI GAGTC 6 cut(s) 209, 458, 533, 889, 1328, 1535
MmeI TCCRAC 2 cut(s) 481, 1596
MreI CGCCGGCG 1 cut(s) 1531
MroI TCCGGA 1 cut(s) 535
MroNI GCCGGC 2 cut(s) 278, 1531
MroXI GAANNNNTTC 1 cut(s) 1292
MseI TTAA 1 cut(s) 411
MslI CAYNNNNRTG 2 cut(s) 405, 629
MspA1I CMGCKG 1 cut(s) 1326
MspR9I CCNGG 3 cut(s) 449, 1664, 1665
Mva1269I GAATGC 2 cut(s) 1353, 1392
MvnI CGCG 2 cut(s) 358, 715
NaeI GCCGGC 2 cut(s) 280, 1533
NarI GGCGCC 2 cut(s) 99, 707
NciI CCSGG 3 cut(s) 449, 1664, 1665
NdeII GATC 5 cut(s) 379, 397, 451, 939, 1623
NgoMIV GCCGGC 2 cut(s) 278, 1531
NlaIII CATG 4 cut(s) 199, 430, 584, 701
NlaIV GGNNCC 5 cut(s) 38, 100, 708, 813, 1662
NmeAIII GCCGAG 1 cut(s) 243
NmuCI GTSAC 2 cut(s) 595, 1201
NspV TTCGAA 1 cut(s) 996
OliI CACNNNNGTG 1 cut(s) 629
PciSI GCTCTTC 2 cut(s) 200, 1283
PcsI WCGNNNNNNNCGW 5 cut(s) 26, 294, 513, 728, 993
PctI GAATGC 2 cut(s) 1353, 1392
PdiI GCCGGC 2 cut(s) 280, 1533
PdmI GAANNNNTTC 1 cut(s) 1292
PfeI GAWTC 3 cut(s) 498, 1428, 1487
PflMI CCANNNNNTGG 1 cut(s) 742
PleI GAGTC 6 cut(s) 209, 458, 533, 888, 1328, 1534
PluTI GGCGCC 2 cut(s) 102, 710
PpsI GAGTC 6 cut(s) 209, 458, 533, 888, 1328, 1534
PshAI GACNNNNGTC 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 425
PspFI CCCAGC 2 cut(s) 41, 210
PspN4I GGNNCC 5 cut(s) 38, 100, 708, 813, 1662
PspOMI GGGCCC 1 cut(s) 1660
PspPI GGNCC 9 cut(s) 229, 550, 634, 1227, 1234, 1245, 1660, 1661, 1685
PsuI RGATCY 1 cut(s) 451
RsaI GTAC 6 cut(s) 162, 368, 446, 640, 734, 813
RsaNI GTAC 6 cut(s) 161, 367, 445, 639, 733, 812
RseI CAYNNNNRTG 2 cut(s) 405, 629
SacI GAGCTC 1 cut(s) 425
SapI GCTCTTC 2 cut(s) 200, 1283
SaqAI TTAA 1 cut(s) 411
Sau3AI GATC 5 cut(s) 379, 397, 451, 939, 1623
Sau96I GGNCC 9 cut(s) 229, 550, 634, 1227, 1234, 1245, 1660, 1661, 1685
SchI GAGTC 6 cut(s) 209, 458, 533, 889, 1328, 1535
ScrFI CCNGG 3 cut(s) 449, 1664, 1665
SduI GDGCHC 4 cut(s) 425, 1413, 1559, 1664
SfoI GGCGCC 2 cut(s) 100, 708
SfuI TTCGAA 1 cut(s) 996
SgrAI CRCCGGYG 1 cut(s) 1531
SinI GGWCC 4 cut(s) 229, 550, 634, 1227
SmaI CCCGGG 1 cut(s) 1665
SmiMI CAYNNNNRTG 2 cut(s) 405, 629
SmlI CTYRAG 1 cut(s) 1447
SmoI CTYRAG 1 cut(s) 1447
Sse9I AATT 2 cut(s) 1654, 1689
SspDI GGCGCC 2 cut(s) 98, 706
SspI AATATT 1 cut(s) 613
SspMI CTAG 1 cut(s) 131
SstI GAGCTC 1 cut(s) 425
StyD4I CCNGG 3 cut(s) 447, 1662, 1663
StyI CCWWGG 1 cut(s) 1230
TaaI ACNGT 2 cut(s) 388, 530
TaiI ACGT 3 cut(s) 23, 519, 734
TaqI TCGA 6 cut(s) 722, 987, 996, 1216, 1223, 1670
TasI AATT 2 cut(s) 1654, 1689
TatI WGTACW 1 cut(s) 160
TfiI GAWTC 3 cut(s) 498, 1428, 1487
Tru1I TTAA 1 cut(s) 411
Tru9I TTAA 1 cut(s) 411
TscAI CASTG 3 cut(s) 368, 954, 1024
TseFI GTSAC 2 cut(s) 595, 1201
TseI GCWGC 6 cut(s) 311, 314, 435, 438, 674, 1316
Tsp45I GTSAC 2 cut(s) 595, 1201
TspDTI ATGAA 6 cut(s) 127, 597, 873, 1326, 1491, 1576
TspGWI ACGGA 2 cut(s) 626, 1428
TspMI CCCGGG 1 cut(s) 1663
TspRI CASTG 3 cut(s) 368, 954, 1024
Van91I CCANNNNNTGG 1 cut(s) 742
VneI GTGCAC 1 cut(s) 1409
VpaK11BI GGWCC 4 cut(s) 229, 550, 634, 1227
XmaI CCCGGG 1 cut(s) 1663
XmnI GAANNNNTTC 1 cut(s) 1292
XspI CTAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.