Hydroxyproline-rich glycoprotein family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72790 |
| fragaria_vesca | FvH4_6g34220 |
| malus_domestica | MD09G1187300.v1.1 MD17G1172100.v1.1 |
| prunus_persica | Prupe.3G044600_v2.0.a1 |
| pyrus_communis | pycom09g10390 pycom17g16930 pycom17g16940 |
| rosa_chinensis | RchiOBHm_Chr2g0144551 |
| rosa_laevigata | RLG00000014981 RLG00000020088 RLG00000036003 |
| rosa_multiflora | Rmu_sc0005789.1_g000003 Rmu_sc0029105.1_g000001 Rmu_sc0029106.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101210 |
| rosa_rugosa | Rorug02G0387800 |
| rosa_samantha | Rh2AG439800 Rh2BG449800 Rh2CG426800 Rh2DG459700 |
| rosa_wichuraiana | Rw2G035980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 66, 110 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1496 |
| AccBSI | CCGCTC | 1 cut(s) | 81 |
| AccII | CGCG | 2 cut(s) | 385, 757 |
| AccIII | TCCGGA | 1 cut(s) | 559 |
| AclWI | GGATC | 3 cut(s) | 401, 506, 652 |
| AcsI | RAATTY | 2 cut(s) | 991, 1153 |
| AcuI | CTGAAG | 2 cut(s) | 85, 1397 |
| AcyI | GRCGYC | 3 cut(s) | 67, 111, 596 |
| AfaI | GTAC | 6 cut(s) | 395, 419, 470, 664, 776, 852 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 559, 592, 1496 |
| AgeI | ACCGGT | 1 cut(s) | 513 |
| AgsI | TTSAA | 2 cut(s) | 1032, 1115 |
| AjiI | CACGTC | 1 cut(s) | 541 |
| AjnI | CCWGG | 1 cut(s) | 599 |
| AleI | CACNNNNGTG | 1 cut(s) | 653 |
| Alw21I | GWGCWC | 2 cut(s) | 1274, 1392 |
| Alw26I | GTCTC | 5 cut(s) | 30, 967, 1059, 1475, 1510 |
| Alw44I | GTGCAC | 1 cut(s) | 1388 |
| AlwI | GGATC | 3 cut(s) | 401, 506, 652 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 848 |
| Aor13HI | TCCGGA | 1 cut(s) | 559 |
| AoxI | GGCC | 3 cut(s) | 1212, 1236, 1636 |
| ApaI | GGGCCC | 1 cut(s) | 1640 |
| ApaLI | GTGCAC | 1 cut(s) | 1388 |
| ApeKI | GCWGC | 8 cut(s) | 46, 315, 335, 338, 341, 459, 462, 1016 |
| ApoI | RAATTY | 2 cut(s) | 991, 1153 |
| AsiGI | ACCGGT | 1 cut(s) | 513 |
| AspLEI | GCGC | 3 cut(s) | 69, 113, 847 |
| AspS9I | GGNCC | 6 cut(s) | 574, 1206, 1213, 1237, 1636, 1637 |
| AsuC2I | CCSGG | 3 cut(s) | 64, 554, 1640 |
| AsuHPI | GGTGA | 4 cut(s) | 223, 1276, 1308, 1472 |
| AsuII | TTCGAA | 1 cut(s) | 996 |
| AvaII | GGWCC | 2 cut(s) | 574, 1206 |
| BaeGI | GKGCMC | 2 cut(s) | 1392, 1640 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 525, 558 |
| BanI | GGYRCC | 2 cut(s) | 66, 110 |
| BanII | GRGCYC | 4 cut(s) | 449, 1274, 1538, 1640 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 758, 790 |
| BbsI | GAAGAC | 2 cut(s) | 15, 1090 |
| Bbv12I | GWGCWC | 2 cut(s) | 1274, 1392 |
| BbvI | GCAGC | 8 cut(s) | 58, 322, 325, 327, 328, 471, 474, 1003 |
| BccI | CCATC | 4 cut(s) | 175, 305, 688, 1448 |
| BceAI | ACGGC | 8 cut(s) | 119, 322, 573, 727, 1036, 1251, 1342, 1408 |
| BciT130I | CCWGG | 1 cut(s) | 601 |
| BcnI | CCSGG | 3 cut(s) | 64, 554, 1640 |
| BcoDI | GTCTC | 5 cut(s) | 30, 967, 1059, 1475, 1510 |
| BfaI | CTAG | 1 cut(s) | 1485 |
| BfoI | RGCGCY | 3 cut(s) | 70, 114, 848 |
| BlpI | GCTNAGC | 1 cut(s) | 345 |
| Bme1390I | CCNGG | 4 cut(s) | 64, 554, 601, 1640 |
| Bme18I | GGWCC | 2 cut(s) | 574, 1206 |
| BmgBI | CACGTC | 1 cut(s) | 541 |
| BmgT120I | GGNCC | 6 cut(s) | 574, 1206, 1213, 1237, 1636, 1637 |
| BmiI | GGNNCC | 6 cut(s) | 41, 68, 112, 448, 558, 1638 |
| BmrFI | CCNGG | 4 cut(s) | 64, 554, 601, 1640 |
| BmsI | GCATC | 2 cut(s) | 607, 1051 |
| BpiI | GAAGAC | 2 cut(s) | 15, 1090 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 345 |
| Bpu14I | TTCGAA | 1 cut(s) | 996 |
| BpuEI | CTTGAG | 1 cut(s) | 1411 |
| BpuMI | CCSGG | 3 cut(s) | 64, 554, 1640 |
| BsaHI | GRCGYC | 3 cut(s) | 67, 111, 596 |
| BsaI | GGTCTC | 1 cut(s) | 1510 |
| BsaJI | CCNNGG | 5 cut(s) | 62, 274, 699, 755, 1209 |
| BsaWI | WCCGGW | 3 cut(s) | 513, 559, 640 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1364, 1394 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 559, 592, 1496 |
| Bse118I | RCCGGY | 7 cut(s) | 290, 513, 721, 853, 1177, 1255, 1510 |
| Bse1I | ACTGG | 1 cut(s) | 1476 |
| Bse3DI | GCAATG | 4 cut(s) | 863, 1250, 1349, 1566 |
| BseAI | TCCGGA | 1 cut(s) | 559 |
| BseBI | CCWGG | 1 cut(s) | 601 |
| BseDI | CCNNGG | 5 cut(s) | 62, 274, 699, 755, 1209 |
| BseGI | GGATG | 4 cut(s) | 117, 695, 823, 1042 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 559, 592, 1496 |
| BseMI | GCAATG | 4 cut(s) | 863, 1250, 1349, 1566 |
| BseMII | CTCAG | 4 cut(s) | 203, 359, 941, 1580 |
| BseNI | ACTGG | 1 cut(s) | 1476 |
| BseRI | GAGGAG | 9 cut(s) | 79, 86, 113, 116, 119, 716, 933, 967, 1636 |
| BseSI | GKGCMC | 2 cut(s) | 1392, 1640 |
| BseXI | GCAGC | 8 cut(s) | 58, 322, 325, 327, 328, 471, 474, 1003 |
| BseYI | CCCAGC | 1 cut(s) | 222 |
| Bsh1236I | CGCG | 2 cut(s) | 385, 757 |
| BshFI | GGCC | 3 cut(s) | 1214, 1238, 1638 |
| BshNI | GGYRCC | 2 cut(s) | 66, 110 |
| BshTI | ACCGGT | 1 cut(s) | 513 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1274, 1392 |
| BsiWI | CGTACG | 1 cut(s) | 662 |
| BslFI | GGGAC | 3 cut(s) | 149, 239, 1325 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 559, 592, 1496 |
| BsmAI | GTCTC | 5 cut(s) | 30, 967, 1059, 1475, 1510 |
| BsmBI | CGTCTC | 1 cut(s) | 1059 |
| BsmFI | GGGAC | 3 cut(s) | 149, 239, 1325 |
| BsmI | GAATGC | 3 cut(s) | 175, 1332, 1371 |
| BsnI | GGCC | 3 cut(s) | 1214, 1238, 1638 |
| Bso31I | GGTCTC | 1 cut(s) | 1510 |
| Bsp119I | TTCGAA | 1 cut(s) | 996 |
| Bsp120I | GGGCCC | 1 cut(s) | 1636 |
| Bsp1286I | GDGCHC | 5 cut(s) | 449, 1274, 1392, 1538, 1640 |
| Bsp13I | TCCGGA | 1 cut(s) | 559 |
| Bsp1407I | TGTACA | 1 cut(s) | 417 |
| Bsp143I | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 345 |
| BspANI | GGCC | 3 cut(s) | 1214, 1238, 1638 |
| BspCNI | CTCAG | 4 cut(s) | 202, 358, 942, 1581 |
| BspEI | TCCGGA | 1 cut(s) | 559 |
| BspFNI | CGCG | 2 cut(s) | 385, 757 |
| BspLI | GGNNCC | 6 cut(s) | 41, 68, 112, 448, 558, 1638 |
| BspPI | GGATC | 3 cut(s) | 401, 506, 652 |
| BspQI | GCTCTTC | 2 cut(s) | 212, 1262 |
| BspT104I | TTCGAA | 1 cut(s) | 996 |
| BspT107I | GGYRCC | 2 cut(s) | 66, 110 |
| BspTNI | GGTCTC | 1 cut(s) | 1510 |
| BsrBI | CCGCTC | 1 cut(s) | 81 |
| BsrDI | GCAATG | 4 cut(s) | 863, 1250, 1349, 1566 |
| BsrFI | RCCGGY | 7 cut(s) | 290, 513, 721, 853, 1177, 1255, 1510 |
| BsrGI | TGTACA | 1 cut(s) | 417 |
| BsrI | ACTGG | 1 cut(s) | 1476 |
| BssAI | RCCGGY | 7 cut(s) | 290, 513, 721, 853, 1177, 1255, 1510 |
| BssECI | CCNNGG | 5 cut(s) | 62, 274, 699, 755, 1209 |
| BssMI | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| BssNI | GRCGYC | 3 cut(s) | 67, 111, 596 |
| BssT1I | CCWWGG | 1 cut(s) | 1209 |
| Bst2UI | CCWGG | 1 cut(s) | 601 |
| Bst4CI | ACNGT | 2 cut(s) | 415, 1092 |
| Bst6I | CTCTTC | 6 cut(s) | 104, 212, 761, 818, 908, 1262 |
| BstACI | GRCGYC | 3 cut(s) | 67, 111, 596 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 617 |
| BstAUI | TGTACA | 1 cut(s) | 417 |
| BstBI | TTCGAA | 1 cut(s) | 996 |
| BstC8I | GCNNGC | 2 cut(s) | 843, 1512 |
| BstDEI | CTNAG | 4 cut(s) | 189, 345, 950, 1589 |
| BstDSI | CCRYGG | 1 cut(s) | 755 |
| BstF5I | GGATG | 4 cut(s) | 117, 695, 823, 1042 |
| BstFNI | CGCG | 2 cut(s) | 385, 757 |
| BstH2I | RGCGCY | 3 cut(s) | 70, 114, 848 |
| BstHHI | GCGC | 3 cut(s) | 69, 113, 847 |
| BstKTI | GATC | 7 cut(s) | 409, 427, 478, 501, 571, 660, 1605 |
| BstMAI | GTCTC | 5 cut(s) | 30, 967, 1059, 1475, 1510 |
| BstMBI | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| BstNI | CCWGG | 1 cut(s) | 601 |
| BstSCI | CCNGG | 4 cut(s) | 62, 552, 599, 1638 |
| BstSLI | GKGCMC | 2 cut(s) | 1392, 1640 |
| BstUI | CGCG | 2 cut(s) | 385, 757 |
| BstV1I | GCAGC | 8 cut(s) | 58, 322, 325, 327, 328, 471, 474, 1003 |
| BstV2I | GAAGAC | 2 cut(s) | 15, 1090 |
| BstX2I | RGATCY | 1 cut(s) | 406 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 36, 785 |
| BstYI | RGATCY | 1 cut(s) | 406 |
| BsuRI | GGCC | 3 cut(s) | 1214, 1238, 1638 |
| BtgI | CCRYGG | 1 cut(s) | 755 |
| BtgZI | GCGATG | 1 cut(s) | 324 |
| BtrI | CACGTC | 1 cut(s) | 541 |
| BtsCI | GGATG | 4 cut(s) | 117, 695, 823, 1042 |
| BtsIMutI | CAGTG | 3 cut(s) | 395, 947, 1483 |
| Cac8I | GCNNGC | 2 cut(s) | 843, 1512 |
| CaiI | CAGNNNCTG | 1 cut(s) | 848 |
| CfoI | GCGC | 3 cut(s) | 69, 113, 847 |
| Cfr10I | RCCGGY | 7 cut(s) | 290, 513, 721, 853, 1177, 1255, 1510 |
| Cfr13I | GGNCC | 6 cut(s) | 574, 1206, 1213, 1237, 1636, 1637 |
| Cfr42I | CCGCGG | 1 cut(s) | 758 |
| CseI | GACGC | 2 cut(s) | 374, 585 |
| Csp6I | GTAC | 6 cut(s) | 394, 418, 469, 663, 775, 851 |
| CspAI | ACCGGT | 1 cut(s) | 513 |
| CviAII | CATG | 3 cut(s) | 208, 451, 1228 |
| CviQI | GTAC | 6 cut(s) | 394, 418, 469, 663, 775, 851 |
| DdeI | CTNAG | 4 cut(s) | 189, 345, 950, 1589 |
| DinI | GGCGCC | 2 cut(s) | 68, 112 |
| DpnI | GATC | 7 cut(s) | 408, 426, 477, 500, 570, 659, 1604 |
| DpnII | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| Eam1104I | CTCTTC | 6 cut(s) | 104, 212, 761, 818, 908, 1262 |
| EarI | CTCTTC | 6 cut(s) | 104, 212, 761, 818, 908, 1262 |
| EciI | GGCGGA | 7 cut(s) | 65, 729, 741, 1038, 1056, 1177, 1329 |
| Ecl136II | GAGCTC | 1 cut(s) | 1272 |
| Eco130I | CCWWGG | 1 cut(s) | 1209 |
| Eco24I | GRGCYC | 4 cut(s) | 449, 1274, 1538, 1640 |
| Eco31I | GGTCTC | 1 cut(s) | 1510 |
| Eco47I | GGWCC | 2 cut(s) | 574, 1206 |
| Eco53kI | GAGCTC | 1 cut(s) | 1272 |
| Eco57I | CTGAAG | 2 cut(s) | 85, 1397 |
| EcoICRI | GAGCTC | 1 cut(s) | 1272 |
| EcoRII | CCWGG | 1 cut(s) | 599 |
| EcoT14I | CCWWGG | 1 cut(s) | 1209 |
| EcoT38I | GRGCYC | 4 cut(s) | 449, 1274, 1538, 1640 |
| EgeI | GGCGCC | 2 cut(s) | 68, 112 |
| EheI | GGCGCC | 2 cut(s) | 68, 112 |
| ErhI | CCWWGG | 1 cut(s) | 1209 |
| Esp3I | CGTCTC | 1 cut(s) | 1059 |
| FaeI | CATG | 3 cut(s) | 211, 454, 1231 |
| FaqI | GGGAC | 3 cut(s) | 149, 239, 1325 |
| FatI | CATG | 3 cut(s) | 207, 450, 1227 |
| FauNDI | CATATG | 1 cut(s) | 613 |
| FokI | GGATG | 4 cut(s) | 104, 682, 830, 1029 |
| FriOI | GRGCYC | 4 cut(s) | 449, 1274, 1538, 1640 |
| FspBI | CTAG | 1 cut(s) | 1485 |
| GlaI | GCGC | 3 cut(s) | 68, 112, 846 |
| GsaI | CCCAGC | 1 cut(s) | 226 |
| HaeII | RGCGCY | 3 cut(s) | 70, 114, 848 |
| HaeIII | GGCC | 3 cut(s) | 1214, 1238, 1638 |
| HgaI | GACGC | 2 cut(s) | 374, 585 |
| HhaI | GCGC | 3 cut(s) | 69, 113, 847 |
| Hin1I | GRCGYC | 3 cut(s) | 67, 111, 596 |
| Hin1II | CATG | 3 cut(s) | 211, 454, 1231 |
| Hin6I | GCGC | 3 cut(s) | 67, 111, 845 |
| HinP1I | GCGC | 3 cut(s) | 67, 111, 845 |
| HincII | GTYRAC | 1 cut(s) | 436 |
| HindII | GTYRAC | 1 cut(s) | 436 |
| HindIII | AAGCTT | 1 cut(s) | 672 |
| HpaI | GTTAAC | 1 cut(s) | 436 |
| HphI | GGTGA | 4 cut(s) | 223, 1276, 1308, 1472 |
| Hpy166II | GTNNAC | 6 cut(s) | 378, 418, 436, 646, 1390, 1546 |
| Hpy188III | TCNNGA | 3 cut(s) | 560, 937, 1428 |
| Hpy8I | GTNNAC | 6 cut(s) | 378, 418, 436, 646, 1390, 1546 |
| Hpy99I | CGWCG | 7 cut(s) | 302, 305, 308, 415, 533, 594, 733 |
| HpyAV | CCTTC | 6 cut(s) | 124, 157, 744, 875, 1573, 1646 |
| HpyCH4III | ACNGT | 2 cut(s) | 415, 1092 |
| HpyCH4IV | ACGT | 3 cut(s) | 540, 773, 932 |
| HpyCH4V | TGCA | 4 cut(s) | 175, 1042, 1298, 1390 |
| HpyF3I | CTNAG | 4 cut(s) | 189, 345, 950, 1589 |
| HpySE526I | ACGT | 3 cut(s) | 540, 773, 932 |
| Hsp92I | GRCGYC | 3 cut(s) | 67, 111, 596 |
| Hsp92II | CATG | 3 cut(s) | 211, 454, 1231 |
| HspAI | GCGC | 3 cut(s) | 67, 111, 845 |
| KasI | GGCGCC | 2 cut(s) | 66, 110 |
| Kpn2I | TCCGGA | 1 cut(s) | 559 |
| KroI | GCCGGC | 1 cut(s) | 1510 |
| KroNI | GCCGGC | 1 cut(s) | 1512 |
| KspAI | GTTAAC | 1 cut(s) | 436 |
| KspI | CCGCGG | 1 cut(s) | 758 |
| Kzo9I | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| LguI | GCTCTTC | 2 cut(s) | 212, 1262 |
| LmnI | GCTCC | 6 cut(s) | 45, 86, 110, 452, 1277, 1372 |
| Lsp1109I | GCAGC | 8 cut(s) | 58, 322, 325, 327, 328, 471, 474, 1003 |
| LweI | GCATC | 2 cut(s) | 607, 1051 |
| MaeI | CTAG | 1 cut(s) | 1485 |
| MaeII | ACGT | 3 cut(s) | 540, 773, 932 |
| MaeIII | GTNAC | 3 cut(s) | 293, 1180, 1326 |
| MalI | GATC | 7 cut(s) | 408, 426, 477, 500, 570, 659, 1604 |
| MbiI | CCGCTC | 1 cut(s) | 81 |
| MboI | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| MflI | RGATCY | 1 cut(s) | 406 |
| MhlI | GDGCHC | 5 cut(s) | 449, 1274, 1392, 1538, 1640 |
| MluCI | AATT | 5 cut(s) | 19, 829, 991, 1153, 1630 |
| Mly113I | GGCGCC | 2 cut(s) | 67, 111 |
| MlyI | GAGTC | 5 cut(s) | 221, 482, 557, 713, 1307 |
| MmeI | TCCRAC | 5 cut(s) | 434, 505, 859, 1299, 1575 |
| MreI | CGCCGGCG | 1 cut(s) | 1510 |
| MroI | TCCGGA | 1 cut(s) | 559 |
| MroNI | GCCGGC | 1 cut(s) | 1510 |
| MseI | TTAA | 1 cut(s) | 435 |
| MslI | CAYNNNNRTG | 1 cut(s) | 653 |
| MspA1I | CMGCKG | 3 cut(s) | 318, 757, 1305 |
| MspR9I | CCNGG | 4 cut(s) | 64, 554, 601, 1640 |
| Mva1269I | GAATGC | 3 cut(s) | 175, 1332, 1371 |
| MvaI | CCWGG | 1 cut(s) | 601 |
| MvnI | CGCG | 2 cut(s) | 385, 757 |
| NaeI | GCCGGC | 1 cut(s) | 1512 |
| NarI | GGCGCC | 2 cut(s) | 67, 111 |
| NciI | CCSGG | 3 cut(s) | 64, 554, 1640 |
| NdeI | CATATG | 1 cut(s) | 613 |
| NdeII | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| NgoMIV | GCCGGC | 1 cut(s) | 1510 |
| NlaIII | CATG | 3 cut(s) | 211, 454, 1231 |
| NlaIV | GGNNCC | 6 cut(s) | 41, 68, 112, 448, 558, 1638 |
| NmeAIII | GCCGAG | 1 cut(s) | 255 |
| NmuCI | GTSAC | 2 cut(s) | 1180, 1326 |
| NspV | TTCGAA | 1 cut(s) | 996 |
| OliI | CACNNNNGTG | 1 cut(s) | 653 |
| PciSI | GCTCTTC | 2 cut(s) | 212, 1262 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 306, 537, 770, 993 |
| PctI | GAATGC | 3 cut(s) | 175, 1332, 1371 |
| PdiI | GCCGGC | 1 cut(s) | 1512 |
| PfeI | GAWTC | 6 cut(s) | 522, 812, 1407, 1466, 1505, 1643 |
| Pfl23II | CGTACG | 1 cut(s) | 662 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1496 |
| PinAI | ACCGGT | 1 cut(s) | 513 |
| PleI | GAGTC | 5 cut(s) | 221, 482, 557, 712, 1307 |
| PluTI | GGCGCC | 2 cut(s) | 70, 114 |
| PpsI | GAGTC | 5 cut(s) | 221, 482, 557, 712, 1307 |
| Psp124BI | GAGCTC | 1 cut(s) | 1274 |
| Psp6I | CCWGG | 1 cut(s) | 599 |
| PspFI | CCCAGC | 1 cut(s) | 222 |
| PspGI | CCWGG | 1 cut(s) | 599 |
| PspLI | CGTACG | 1 cut(s) | 662 |
| PspN4I | GGNNCC | 6 cut(s) | 41, 68, 112, 448, 558, 1638 |
| PspOMI | GGGCCC | 1 cut(s) | 1636 |
| PspPI | GGNCC | 6 cut(s) | 574, 1206, 1213, 1237, 1636, 1637 |
| PstNI | CAGNNNCTG | 1 cut(s) | 848 |
| PsuI | RGATCY | 1 cut(s) | 406 |
| RsaI | GTAC | 6 cut(s) | 395, 419, 470, 664, 776, 852 |
| RsaNI | GTAC | 6 cut(s) | 394, 418, 469, 663, 775, 851 |
| RseI | CAYNNNNRTG | 1 cut(s) | 653 |
| SacI | GAGCTC | 1 cut(s) | 1274 |
| SacII | CCGCGG | 1 cut(s) | 758 |
| SapI | GCTCTTC | 2 cut(s) | 212, 1262 |
| SaqAI | TTAA | 1 cut(s) | 435 |
| Sau3AI | GATC | 7 cut(s) | 406, 424, 475, 498, 568, 657, 1602 |
| Sau96I | GGNCC | 6 cut(s) | 574, 1206, 1213, 1237, 1636, 1637 |
| SchI | GAGTC | 5 cut(s) | 221, 482, 557, 713, 1307 |
| ScrFI | CCNGG | 4 cut(s) | 64, 554, 601, 1640 |
| SduI | GDGCHC | 5 cut(s) | 449, 1274, 1392, 1538, 1640 |
| SfaNI | GCATC | 2 cut(s) | 607, 1051 |
| SfoI | GGCGCC | 2 cut(s) | 68, 112 |
| Sfr303I | CCGCGG | 1 cut(s) | 758 |
| SfuI | TTCGAA | 1 cut(s) | 996 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1510 |
| SgrBI | CCGCGG | 1 cut(s) | 758 |
| SinI | GGWCC | 2 cut(s) | 574, 1206 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 653 |
| SmlI | CTYRAG | 1 cut(s) | 1426 |
| SmoI | CTYRAG | 1 cut(s) | 1426 |
| Sse9I | AATT | 5 cut(s) | 19, 829, 991, 1153, 1630 |
| SspDI | GGCGCC | 2 cut(s) | 66, 110 |
| SspI | AATATT | 1 cut(s) | 637 |
| SspMI | CTAG | 1 cut(s) | 1485 |
| SstI | GAGCTC | 1 cut(s) | 1274 |
| StyD4I | CCNGG | 4 cut(s) | 62, 552, 599, 1638 |
| StyI | CCWWGG | 1 cut(s) | 1209 |
| TaaI | ACNGT | 2 cut(s) | 415, 1092 |
| TaiI | ACGT | 3 cut(s) | 543, 776, 935 |
| TaqI | TCGA | 6 cut(s) | 764, 987, 996, 1195, 1202, 1646 |
| TasI | AATT | 5 cut(s) | 19, 829, 991, 1153, 1630 |
| TatI | WGTACW | 1 cut(s) | 417 |
| TfiI | GAWTC | 6 cut(s) | 522, 812, 1407, 1466, 1505, 1643 |
| Tru1I | TTAA | 1 cut(s) | 435 |
| Tru9I | TTAA | 1 cut(s) | 435 |
| TscAI | CASTG | 3 cut(s) | 395, 954, 1483 |
| TseFI | GTSAC | 2 cut(s) | 1180, 1326 |
| TseI | GCWGC | 8 cut(s) | 46, 315, 335, 338, 341, 459, 462, 1016 |
| Tsp45I | GTSAC | 2 cut(s) | 1180, 1326 |
| TspDTI | ATGAA | 5 cut(s) | 106, 139, 891, 1518, 1555 |
| TspGWI | ACGGA | 2 cut(s) | 650, 680 |
| TspRI | CASTG | 3 cut(s) | 395, 954, 1483 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1496 |
| VneI | GTGCAC | 1 cut(s) | 1388 |
| VpaK11BI | GGWCC | 2 cut(s) | 574, 1206 |
| XapI | RAATTY | 2 cut(s) | 991, 1153 |
| XspI | CTAG | 1 cut(s) | 1485 |