FvH4_6g35770
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
28218700 .. 28227742
9043 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g35770.t2

Sequence Viewer

Length: 5457 bp
ATGGCTGCCCCCAATAAGTTTTTCTCGCAGTTTATTTCCTTGGTGAAATCATGGATCCCTTGGCGGTCTGAGCCGCCTAATGTTTCGAGGGATTTTTGGATGCCTGATGATAGCTGCAGGGTGTGCTACGAGTGTGATGCACAGTTCACTGTGTTTAACCGTAAACATCATTGCCGGCTTTGTGGACGAGTTTTCTGTGCCAAGTGTACAGAAAACTCAATTCCTCCCCCAAGTATAGATCGGGTAGAGAGGGAAAGGATTCGTGTCTGCAATTTTTGTTACAAGCAACATGAGCAAGGCATAGCTTCTACTCATGAAAATGGAACACAGATTGCTAATCTAGATCTTAGTACCTCACCATCAGAAACAAGTTTTACTAGCTTCAAGTCCTGCGGCACTGGTAACAGCAGTAGCTTCACTCTTAACTCAGTCCCATACTCAACTGGACCATACCAACGTCTTCAAAACAGTTCTGGTCTTAGCCCCTGTCAATCATCTCTCATGGGAACAATCACAGAAAAGCACAGCAAGTATGCCTCCTGGAGGACCAATGATTTTGTTGCAGATATAGCGGATTCATCTCCAAATCATTACGAAATTTCAACAACCAGGAGTGATGACGAGGATGTCGATTACGGGACATATCAGTCAAATTCTAAGAATTATCCCCAAGTCAGTGATTACTATGATCATGTAGAGTTTTATGACATGAGCAATCATGATGAATCACATAAGGTGGATATTGATGGCGGAAACATTGATGCAAAGCATTTAAGCAGCTCCCCATTACTTCACAGTTTTGACTCGCAGGGTTCGGATGAAATTCCACCGCTTGAAAAGAAAGAAGATGAACATGATATGGGTGATGAATGTGCTTCTTCTTTATGTTCTGCAGGGGATGTTGACATAGAATCTTTGGATTTTGAGAAAAATGCCCTTCTCTGGCTCCCCCCTGAACCAGAAGATGAAGAAGATGAAAGAGAAACGGTTCTTCTTGATGATGATGATGATGGTGATGCTGCAGGAGAGTGGGGAACCTTACGTGCATCAAGCAGTTTTGGCAGTGGGGAGTCTCGCAATAGGGACCGATCTGGTGAGGAGCATAAAAAGGTGATGAAGAATGTGGTTGATGGGCACTTTAGGGCTTTGGTAGCCCAGCTATTGCAGGTTGAGAACCTCCCTGTAGGCCAGGAAGGTGAAAATGAAAGTTGGTTGGAGATCATTACATATCTGTCGTGGGAAGCTGCTACACTATTAAAGCCAGATATGAGCAAAGGGGGAGGGATGGATCCTGGTGGTTATGTAAAAGTAAAATGCATAGCTTCTGGACGTCCCTCTGACAGTATGGTGGTCAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGACGAATGGCATCTAAAATGGAGAAACCTCGGTTCATGATTCTTGGTGGTGCTCTTGAGTACCAGCGAGTTTCTAACCTATTGTCAAGTTTTGATACTCTTCTACAGCAGGAGATGGACCATCTAAAGATGGCAGTAGCAAAGATTGAAGCACACCACCCTGATGTCCTACTGGTGGAGAAATCAGTTTCTCGATATGCTCAGGAATATCTTCTTGCAAAAGACATATCACTTGTTCTTAATATCAAGAGGTCACTTTTAGAGCGCATAGCTCGCTGTACAGGTGCTCAAATAGTTCCCTCTATTGATCATCTCTCTTCACAAAAGTTGGGCTACTGTGACACATTTCATGTGGAGAGGTTCCTGGAAGATCTTGGTTCTGCTGGCCAGGGTGGGAAGAAACTGGTGAAGACATTGATGTATTTTGAAGGCTGCCCAAAACCGTTGGGTTGTACTATTTTACTCAGAGGTGCCAATGGGGATGAATTGAAAAAAGTGAAGCATGTGGTTCAGTATGGGGTTTTTGCAGCATATCACTTGGCTTTGGAGACATCCTTCCTTGCTGATGAAGGAGCCTCTCTGCCTGAACTTCCATTCCAGTCTCCAATTACTGTGGCACTTCCAGATAAACCATCAAGTATTGAGAGGTCCATCTCAACAGTACCTGGTTTTAAAATTGATGCCAATGGAACATCTCAGGGAGCTCAACATCAGAATGAACCAATAAGAGCCAACAGTGTCCCGGTTTCAGATTTTGAGTCAGCAGTTAGGAGTAGACCACCATGTTTACTAACTGGTCGTAGCTCTCTACCTGTCCGTCTGACTTCAAGTTCCACCGATTATACTCGTTTACACTCTGCCGCTCCTGGGAATGGTGTTTCCTTTCATATCGGTGATAATCAAAATGAAATGGACTCTAAAGATTCTTGGGTGGTGGAAACTTCTGCTAGCAAACCTGGCTCTGATATCATGTCTAATCATCTTACTGCAAATAGCATGGGATCTTCGGAGACCATGGGACAAGGTGTCTTGTCCAATACCCAAAATGATCCAAGTGTAAATCAGCTAGGTAGTTCAAACAACCCAACGATGCATCAAGATGGTCAAACCCATGCTGCAGATTCAGGAACTATGAATGAAGAGTTCCCTCCATCACCTGCTGACCATCAGAGCATCTTAGTTTCCTTGTCATCTCGATGCGTGTGGAAGGGCACTGTCTGTGAGAGGTCACATCTGTTCCGAATTAAATACTACGGAAGTTTTGATAAACCTTTAGGACGGTTTTTGCGAGACCATTTATTTGATCAGACGTATCAATGCCATTCTTGCGAGATGCCTTCAGAGGCACATGTTCATTGTTATACTCACCGACAGGGTACTCTCACTATATCTGTTAAGAGGCTGCCAGAAATTTTCTTACCAGGTGAAAGGGAAGGGAAGATCTGGATGTGGCACAGATGTTTGAGGTGTCCAAGGATCAGTGGATTTCCTCCTGCCACTCGGAGAATAGTGATGTCTGATGCTGCATGGGGTTTGTCATTTGGAAAGTTTTTGGAGCTCAGTTTTTCAAACCATGCAGCTGCAAGCAGGGTGGCGAGCTGTGGCCATTCCTTACATAGAGATTGTCTTCGTTTTTATGGATTTGGGAAAATGGTTGCTTGCTTTCGGTATGCATCGATTGATGTTCATTCTGTCTACCTTCCACCCTCCAAACTGGATTTCATTTCCAAGAAGCAGGAGTGGATACAAAAGGAAACTAATGAGGTTGTTGATCGAGCAGAGCTTCTGTTCTCTGAAGTACTTAATGCTCTTCGTCAAATCGTGGAGAAAAGATCTGGTTCAGGGTCAATCACTAGTGGTATTTTAACAGCTGAATCCCGACACCAAATAGTGGAATTGGAAGGAATGTTACAGAAGGAGAAGGTAGAATTTGAGGAGTTACTCCAGAAAACTTTGACTAGAGAACCTAAGAAGGGCCAACCTGTTATTGACATTCTGGAGATCAATCGATTGCGGAGGCAGTTATTTTTCCAATCATATATGTGGGACCACCGCTTGGTTTATGCAGCCAGTCTAGATAACAACAGCTTCCAAGATAGTTTGAGCAGTTCAATTCCCGCTGAGGAGAAACCCATGGCTACTAATGAAAAGCTTGCTGGGATGGACGTAGAAAGAAAGCCAGGAAAAGGCTATAATAGTTGTGATTCCTACCTGGTGGATACACTGCTTCGTGATGGCTTTGACCATGATGGAGGCTTTACTAGTCCTGCTATCAATGCTGACATGGTTCATGCAGCTCATGTGGACATGAACAATGATTTGAATAAGGATAAAGGTCAAGCTAATCTCCCTACTAGCACAAGTGTTGGTGCTCAATTTGCTCCTTTGACACCAAGGACAGGTCATCGTAGGGTCCTTTCTGATGGCGAGCTTCCTCGCATGCTGAATTTGTCAGATACCCTTGAGACTGCATGGACCGGTGAAAATCTTATGAAAGGTGTAAAAGCAAGGGAGAACACCTGTCCAGTTCCTGTCGTGCCCGTAGAAAATTCTTCAAATGCCTCTTCAGTAGAGGGATTGAATTTAAACCATGCAGAAGCCCGAAATGGGACCAAAGTTGCGCATCATGTGTCACCTGCATTGTCGACCAAGGGGTCTGAGAATATGGAAGACAGAGCAAGGTGGTTAAAAATGCCCTTTCTAAACTTCTACTGGTCGCTAAATAAGAATTTTTTATCTGCTGCTCAGAAGTTTGATACACTTGGTGAGTACAATCCGGTATACATTTCATCCTTTCGGGAATTGGAACTGGAAGGTGGTGCTAGGCTGCTCTTGCCTGTGGGTGATAATGATACTGTTGTCCCTGTATATGACGATGAGCCTGCAAGTCTTATAGCCTATGCCCTTGTTTCTTCAGATTACAAGTTACAAACCAGTGATGAGGGGGAAAGAGCAAAAGACAATGGAGATGTTGTGGCCACAGTATCTTTTACTGATTCAGTCATTATGCATCCAGATGATGACACTGTGTCTGAAACTCATAGAAGTCTTGGGTCTACTGAGGAGAGCATACTATCTATGTCTGGATCTCGTGGCTCCCTGGGTTTGGATCCACTTTCATATACAAAGGCTTTGCATGCAAGAGTGTCTTTTGGAGATGATGGCCCGCTTGGTCAGGTTAAGTACTCTGTCACATGTTATTATGCAAAGCGTTTTGAAGCCTTAAGGAAGATGTGTTGTCCCTCTGAGCTTGACTTTGTAAGATCCCTTGGTCGTTGTAAAAAATGGGGAGCCCAAGGTGGTAAGAGCAATGTCTTTTTTGCAAAAACCTTGGATGACCGGTTTATCATCAAACAAGTCACCAAGACAGAGCTGGAATCATTCATCAAATTCGCTCCTGCATATTTCAAGTACCTCTCTGATTCAATTAGCACTGGAAGTCCAACCTGCCTGGCAAAAATTCTGGGGATATATCAGGTTACGTCAAAGCATGTTAAGGGAGGGAAAGAAACAAAGATGGATGTTTTGATTATGGAGAATCTTCTGTTCGGAAGGACTGTAACACGAGTCTATGATCTCAAAGGATCTTCGAGGTCAAGGTATAATCCTGATTCTAGTGGGAGTAACAAGGTTTTGCTGGATCAGAACTTGATAGAGGCAATGCCAACATCTCCAATATTCGTGGGAAACAAGGCAAAGCGGCTGTTGGAGAGAGCTGTCTGGAATGATACCGCTTTCCTTGCTTCAATTGACGTAATGGATTATTCATTACTGGTCGGGGTAGATGAAGAGAAGCATGAGTTAGTACTTGGGATAATTGATTTCATGAGGCAGTATACATGGGATAAGCACCTGGAAACGTGGGTTAAAGCTTCAGGAATCCTTGGTGGGCCAAAGAACGCATCTCCAACCGTAATTTCACCAAAGCAATACAAGAAAAGATTCAGGAAGGCCATGACAACCTATTTTCTGATGGTTCCAGATCAGTGGTCTCCTCCATGTATAGTTCCAAGTACATCCCAGTCTGATTTCGGTGAAGAGGCTGCACACGGGGGCACCTCGGTTGAATGA

Protein Analysis

1819

Amino Acids

201.93

Weight (kDa)

5.82

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 5 - 149 2.4e-20 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1061 - 1227 3.9e-34 Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K PF01504 1226 - 1283 5e-08 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2551, 4030
AasI GACNNNNNNGTC 3 cut(s) 626, 646, 4039
AatII GACGTC 1 cut(s) 1333
Acc16I TGCGCA 1 cut(s) 4008
Acc36I ACCTGC 4 cut(s) 1156, 2551, 4030, 4841
AccB1I GGYRCC 2 cut(s) 1856, 5441
AccB7I CCANNNNNTGG 2 cut(s) 3277, 3442
AccBSI CCGCTC 1 cut(s) 2249
AccI GTMKAC 6 cut(s) 2161, 3081, 4031, 4167, 4442, 5222
AcoI YGGCCR 3 cut(s) 1771, 2989, 4362
AcuI CTGAAG 5 cut(s) 2709, 3201, 3936, 4284, 5244
AcyI GRCGYC 1 cut(s) 1330
AdeI CACNNNGTG 1 cut(s) 4151
AflII CTTAAG 1 cut(s) 4609
AflIII ACRYGT 2 cut(s) 2734, 4580
AgeI ACCGGT 2 cut(s) 3863, 4725
AhdI GACNNNNNGTC 2 cut(s) 2411, 4414
AhlI ACTAGT 2 cut(s) 3239, 3647
AjuI GAANNNNNNNTTGG 5 cut(s) 37, 3089, 3121, 5287, 5319
AloI GAACNNNNNNTCC 2 cut(s) 1965, 1997
Alw21I GWGCWC 5 cut(s) 1441, 1675, 2092, 2946, 3760
Alw26I GTCTC 7 cut(s) 1077, 1928, 1992, 2390, 2670, 3845, 5382
AlwNI CAGNNNCTG 2 cut(s) 2051, 3917
AoxI GGCC 8 cut(s) 1186, 1771, 2989, 3361, 4362, 4549, 5276, 5337
ArsI GACNNNNNNTTYG 2 cut(s) 2669, 2701
AsiGI ACCGGT 2 cut(s) 3863, 4725
Asp700I GAANNNNTTC 4 cut(s) 258, 987, 1596, 5327
AspLEI GCGC 2 cut(s) 1653, 4009
AsuC2I CCSGG 1 cut(s) 2129
AsuNHI GCTAGC 1 cut(s) 2333
AvaII GGWCC 9 cut(s) 446, 546, 1084, 1504, 2034, 3433, 3799, 3861, 3996
BaeGI GKGCMC 4 cut(s) 1137, 2600, 3927, 5444
BaeI ACNNNNGTAYC 2 cut(s) 4230, 4263
BalI TGGCCA 3 cut(s) 1773, 2991, 4364
BamHI GGATCC 3 cut(s) 54, 1288, 4495
BanI GGYRCC 2 cut(s) 1856, 5441
BanII GRGCYC 3 cut(s) 2092, 2946, 4681
BarI GAAGNNNNNNTAC 2 cut(s) 3279, 3311
BauI CACGAG 2 cut(s) 4476, 4950
BbsI GAAGAC 4 cut(s) 452, 1802, 3005, 4062
Bbv12I GWGCWC 5 cut(s) 1441, 1675, 2092, 2946, 3760
BbvCI CCTCAGC 1 cut(s) 3507
BcgI CGANNNNNNTGC 4 cut(s) 119, 153, 4250, 4284
BciVI GTATCC 2 cut(s) 3123, 3598
BclI TGATCA 3 cut(s) 688, 1693, 2689
BcnI CCSGG 1 cut(s) 2129
BcoDI GTCTC 7 cut(s) 1077, 1928, 1992, 2390, 2670, 3845, 5382
BcuI ACTAGT 2 cut(s) 3239, 3647
BfmI CTRYAG 6 cut(s) 115, 891, 1020, 1182, 1490, 2502
BfrI CTTAAG 1 cut(s) 4609
BfuAI ACCTGC 4 cut(s) 1156, 2551, 4030, 4841
BfuI GTATCC 2 cut(s) 3123, 3598
BglII AGATCT 4 cut(s) 343, 1756, 2826, 3218
BmcAI AGTACT 3 cut(s) 3186, 4571, 5193
Bme18I GGWCC 9 cut(s) 446, 546, 1084, 1504, 2034, 3433, 3799, 3861, 3996
BmeRI GACNNNNNGTC 2 cut(s) 2411, 4414
BmrI ACTGGG 1 cut(s) 5401
BmtI GCTAGC 1 cut(s) 2337
BmuI ACTGGG 1 cut(s) 5401
BpiI GAAGAC 4 cut(s) 452, 1802, 3005, 4062
BpmI CTGGAG 3 cut(s) 562, 3314, 3404
Bpu10I CCTNAGC 2 cut(s) 1587, 3507
BpuEI CTTGAG 2 cut(s) 1463, 3869
BpuMI CCSGG 1 cut(s) 2129
Bsa29I ATCGAT 2 cut(s) 3062, 3394
BsaAI YACGTR 1 cut(s) 1043
BsaHI GRCGYC 1 cut(s) 1330
BsaI GGTCTC 3 cut(s) 2390, 2670, 5382
BsaWI WCCGGW 3 cut(s) 3863, 4162, 4725
BsaXI ACNNNNNCTCC 2 cut(s) 4344, 4374
Bse118I RCCGGY 3 cut(s) 174, 3863, 4725
Bse3DI GCAATG 3 cut(s) 169, 4702, 5052
BseCI ATCGAT 2 cut(s) 3062, 3394
BseMI GCAATG 3 cut(s) 169, 4702, 5052
BseRI GAGGAG 5 cut(s) 1112, 3335, 3524, 4463, 5370
BseSI GKGCMC 4 cut(s) 1137, 2600, 3927, 5444
BseYI CCCAGC 2 cut(s) 1155, 3542
BsgI GTGCAG 1 cut(s) 5415
BshFI GGCC 8 cut(s) 1188, 1773, 2991, 3363, 4364, 4551, 5278, 5339
BshNI GGYRCC 2 cut(s) 1856, 5441
BshTI ACCGGT 2 cut(s) 3863, 4725
BshVI ATCGAT 2 cut(s) 3062, 3394
BsiHKAI GWGCWC 5 cut(s) 1441, 1675, 2092, 2946, 3760
BsiSI CCGG 5 cut(s) 175, 2129, 3864, 4163, 4726
BsmAI GTCTC 7 cut(s) 1077, 1928, 1992, 2390, 2670, 3845, 5382
BsnI GGCC 8 cut(s) 1188, 1773, 2991, 3363, 4364, 4551, 5278, 5339
Bso31I GGTCTC 3 cut(s) 2390, 2670, 5382
Bsp1407I TGTACA 2 cut(s) 206, 1664
Bsp19I CCATGG 2 cut(s) 2400, 3519
BspANI GGCC 8 cut(s) 1188, 1773, 2991, 3363, 4364, 4551, 5278, 5339
BspDI ATCGAT 2 cut(s) 3062, 3394
BspHI TCATGA 4 cut(s) 313, 718, 1422, 5211
BspMAI CTGCAG 4 cut(s) 119, 895, 1024, 2506
BspMI ACCTGC 4 cut(s) 1156, 2551, 4030, 4841
BspOI GCTAGC 1 cut(s) 2337
BspQI GCTCTTC 1 cut(s) 3201
BspT107I GGYRCC 2 cut(s) 1856, 5441
BspTI CTTAAG 1 cut(s) 4609
BspTNI GGTCTC 3 cut(s) 2390, 2670, 5382
BsrBI CCGCTC 1 cut(s) 2249
BsrDI GCAATG 3 cut(s) 169, 4702, 5052
BsrFI RCCGGY 3 cut(s) 174, 3863, 4725
BsrGI TGTACA 2 cut(s) 206, 1664
BssAI RCCGGY 3 cut(s) 174, 3863, 4725
BssNAI GTATAC 2 cut(s) 4168, 5223
BssNI GRCGYC 1 cut(s) 1330
BssSI CACGAG 2 cut(s) 4476, 4950
Bst1107I GTATAC 2 cut(s) 4168, 5223
Bst2BI CACGAG 2 cut(s) 4476, 4950
Bst6I CTCTTC 7 cut(s) 1491, 1708, 2520, 3201, 3955, 5169, 5418
BstACI GRCGYC 1 cut(s) 1330
BstAFI CTTAAG 1 cut(s) 4609
BstAPI GCANNNNNTGC 1 cut(s) 123
BstAUI TGTACA 2 cut(s) 206, 1664
BstBAI YACGTR 1 cut(s) 1043
BstDSI CCRYGG 2 cut(s) 2400, 3519
BstENI CCTNNNNNAGG 1 cut(s) 541
BstHHI GCGC 2 cut(s) 1653, 4009
BstMAI GTCTC 7 cut(s) 1077, 1928, 1992, 2390, 2670, 3845, 5382
BstNSI RCATGY 6 cut(s) 1892, 2738, 3829, 4526, 4584, 4880
BstSFI CTRYAG 6 cut(s) 115, 891, 1020, 1182, 1490, 2502
BstSLI GKGCMC 4 cut(s) 1137, 2600, 3927, 5444
BstV2I GAAGAC 4 cut(s) 452, 1802, 3005, 4062
BstXI CCANNNNNNTGG 1 cut(s) 5373
BstZ17I GTATAC 2 cut(s) 4168, 5223
Bsu15I ATCGAT 2 cut(s) 3062, 3394
BsuI GTATCC 2 cut(s) 3123, 3598
BsuRI GGCC 8 cut(s) 1188, 1773, 2991, 3363, 4364, 4551, 5278, 5339
BsuTUI ATCGAT 2 cut(s) 3062, 3394
BtgI CCRYGG 2 cut(s) 2400, 3519
BtsI GCAGTG 2 cut(s) 1069, 3608
BveI ACCTGC 4 cut(s) 1156, 2551, 4030, 4841
CaiI CAGNNNCTG 2 cut(s) 2051, 3917
CciI TCATGA 4 cut(s) 313, 718, 1422, 5211
CfoI GCGC 2 cut(s) 1653, 4009
Cfr10I RCCGGY 3 cut(s) 174, 3863, 4725
ClaI ATCGAT 2 cut(s) 3062, 3394
CsiI ACCWGGT 3 cut(s) 2050, 2806, 3597
CspAI ACCGGT 2 cut(s) 3863, 4725
CspCI CAANNNNNGTGG 6 cut(s) 1980, 2015, 2958, 2993, 5049, 5084
DraI TTTAAA 2 cut(s) 2059, 3972
DraIII CACNNNGTG 1 cut(s) 4151
DrdI GACNNNNNNGTC 3 cut(s) 626, 646, 4039
DriI GACNNNNNGTC 2 cut(s) 2411, 4414
DseDI GACNNNNNNGTC 3 cut(s) 626, 646, 4039
EaeI YGGCCR 3 cut(s) 1771, 2989, 4362
Eam1104I CTCTTC 7 cut(s) 1491, 1708, 2520, 3201, 3955, 5169, 5418
Eam1105I GACNNNNNGTC 2 cut(s) 2411, 4414
EarI CTCTTC 7 cut(s) 1491, 1708, 2520, 3201, 3955, 5169, 5418
EciI GGCGGA 1 cut(s) 765
Ecl136II GAGCTC 2 cut(s) 2090, 2944
Eco24I GRGCYC 3 cut(s) 2092, 2946, 4681
Eco31I GGTCTC 3 cut(s) 2390, 2670, 5382
Eco32I GATATC 1 cut(s) 2353
Eco47I GGWCC 9 cut(s) 446, 546, 1084, 1504, 2034, 3433, 3799, 3861, 3996
Eco53kI GAGCTC 2 cut(s) 2090, 2944
Eco57I CTGAAG 5 cut(s) 2709, 3201, 3936, 4284, 5244
EcoICRI GAGCTC 2 cut(s) 2090, 2944
EcoNI CCTNNNNNAGG 1 cut(s) 541
EcoO109I RGGNCCY 1 cut(s) 3799
EcoRV GATATC 1 cut(s) 2353
EcoT22I ATGCAT 4 cut(s) 1319, 2481, 3061, 4398
EcoT38I GRGCYC 3 cut(s) 2092, 2946, 4681
FalI AAGNNNNNCTT 2 cut(s) 4519, 4551
FauI CCCGC 2 cut(s) 3511, 4560
FbaI TGATCA 3 cut(s) 688, 1693, 2689
FblI GTMKAC 6 cut(s) 2161, 3081, 4031, 4167, 4442, 5222
FriOI GRGCYC 3 cut(s) 2092, 2946, 4681
FspI TGCGCA 1 cut(s) 4008
GlaI GCGC 2 cut(s) 1652, 4008
GsaI CCCAGC 2 cut(s) 1159, 3546
GsuI CTGGAG 3 cut(s) 562, 3314, 3404
HaeIII GGCC 8 cut(s) 1188, 1773, 2991, 3363, 4364, 4551, 5278, 5339
HapII CCGG 5 cut(s) 175, 2129, 3864, 4163, 4726
HhaI GCGC 2 cut(s) 1653, 4009
Hin1I GRCGYC 1 cut(s) 1330
Hin6I GCGC 2 cut(s) 1651, 4007
HinP1I GCGC 2 cut(s) 1651, 4007
HincII GTYRAC 2 cut(s) 904, 4032
HindII GTYRAC 2 cut(s) 904, 4032
HindIII AAGCTT 2 cut(s) 3536, 5256
HpaII CCGG 5 cut(s) 175, 2129, 3864, 4163, 4726
Hpy99I CGWCG 1 cut(s) 1392
HpyCH4IV ACGT 8 cut(s) 457, 1042, 1330, 2696, 3552, 4868, 5139, 5246
HpySE526I ACGT 8 cut(s) 457, 1042, 1330, 2696, 3552, 4868, 5139, 5246
Hsp92I GRCGYC 1 cut(s) 1330
HspAI GCGC 2 cut(s) 1651, 4007
KroI GCCGGC 1 cut(s) 174
KroNI GCCGGC 1 cut(s) 176
Ksp22I TGATCA 3 cut(s) 688, 1693, 2689
LguI GCTCTTC 1 cut(s) 3201
MabI ACCWGGT 3 cut(s) 2050, 2806, 3597
MaeII ACGT 8 cut(s) 457, 1042, 1330, 2696, 3552, 4868, 5139, 5246
MbiI CCGCTC 1 cut(s) 2249
MfeI CAATTG 1 cut(s) 5133
MlsI TGGCCA 3 cut(s) 1773, 2991, 4364
MluNI TGGCCA 3 cut(s) 1773, 2991, 4364
MlyI GAGTC 5 cut(s) 797, 1079, 2153, 2294, 4962
MmeI TCCRAC 4 cut(s) 1194, 4853, 5073, 5318
Mox20I TGGCCA 3 cut(s) 1773, 2991, 4364
Mph1103I ATGCAT 4 cut(s) 1319, 2481, 3061, 4398
MroNI GCCGGC 1 cut(s) 174
MroXI GAANNNNTTC 4 cut(s) 258, 987, 1596, 5327
MscI TGGCCA 3 cut(s) 1773, 2991, 4364
MslI CAYNNNNRTG 8 cut(s) 318, 1548, 2100, 2277, 2484, 2581, 3427, 4401
Msp20I TGGCCA 3 cut(s) 1773, 2991, 4364
MspA1I CMGCKG 3 cut(s) 2966, 3257, 3506
MspCI CTTAAG 1 cut(s) 4609
MspI CCGG 5 cut(s) 175, 2129, 3864, 4163, 4726
MunI CAATTG 1 cut(s) 5133
NaeI GCCGGC 1 cut(s) 176
NciI CCSGG 1 cut(s) 2129
NcoI CCATGG 2 cut(s) 2400, 3519
NgoMIV GCCGGC 1 cut(s) 174
NheI GCTAGC 1 cut(s) 2333
NmuCI GTSAC 6 cut(s) 1638, 1724, 2613, 4017, 4576, 4744
NsbI TGCGCA 1 cut(s) 4008
NsiI ATGCAT 4 cut(s) 1319, 2481, 3061, 4398
NspI RCATGY 6 cut(s) 1892, 2738, 3829, 4526, 4584, 4880
PaeI GCATGC 2 cut(s) 3829, 4526
PagI TCATGA 4 cut(s) 313, 718, 1422, 5211
PaqCI CACCTGC 2 cut(s) 2551, 4030
PasI CCCWGGG 1 cut(s) 4486
PciI ACATGT 2 cut(s) 2734, 4580
PciSI GCTCTTC 1 cut(s) 3201
PcsI WCGNNNNNNNCGW 2 cut(s) 627, 2671
PdiI GCCGGC 1 cut(s) 176
PdmI GAANNNNTTC 4 cut(s) 258, 987, 1596, 5327
PflMI CCANNNNNTGG 2 cut(s) 3277, 3442
PfoI TCCNGGA 2 cut(s) 539, 1749
PinAI ACCGGT 2 cut(s) 3863, 4725
PleI GAGTC 5 cut(s) 797, 1078, 2152, 2294, 4961
PpsI GAGTC 5 cut(s) 797, 1078, 2152, 2294, 4961
Ppu21I YACGTR 1 cut(s) 1043
PpuMI RGGWCCY 1 cut(s) 3799
PscI ACATGT 2 cut(s) 2734, 4580
Psp124BI GAGCTC 2 cut(s) 2092, 2946
Psp5II RGGWCCY 1 cut(s) 3799
PspFI CCCAGC 2 cut(s) 1155, 3542
PspPPI RGGWCCY 1 cut(s) 3799
PstI CTGCAG 4 cut(s) 119, 895, 1024, 2506
PstNI CAGNNNCTG 2 cut(s) 2051, 3917
PvuII CAGCTG 2 cut(s) 2966, 3257
RseI CAYNNNNRTG 8 cut(s) 318, 1548, 2100, 2277, 2484, 2581, 3427, 4401
SacI GAGCTC 2 cut(s) 2092, 2946
SalI GTCGAC 1 cut(s) 4030
SapI GCTCTTC 1 cut(s) 3201
ScaI AGTACT 3 cut(s) 3186, 4571, 5193
SchI GAGTC 5 cut(s) 797, 1079, 2153, 2294, 4962
SexAI ACCWGGT 3 cut(s) 2050, 2806, 3597
SfcI CTRYAG 6 cut(s) 115, 891, 1020, 1182, 1490, 2502
SinI GGWCC 9 cut(s) 446, 546, 1084, 1504, 2034, 3433, 3799, 3861, 3996
SmiMI CAYNNNNRTG 8 cut(s) 318, 1548, 2100, 2277, 2484, 2581, 3427, 4401
SmlI CTYRAG 3 cut(s) 1442, 3848, 4609
SmoI CTYRAG 3 cut(s) 1442, 3848, 4609
SpeI ACTAGT 2 cut(s) 3239, 3647
SphI GCATGC 2 cut(s) 3829, 4526
SspI AATATT 1 cut(s) 5064
SstI GAGCTC 2 cut(s) 2092, 2946
TaiI ACGT 8 cut(s) 460, 1045, 1333, 2699, 3555, 4871, 5142, 5249
TaqII GACCGA 1 cut(s) 1101
TatI WGTACW 8 cut(s) 206, 1664, 1838, 3184, 4155, 4569, 5191, 5399
TauI GCSGC 4 cut(s) 76, 396, 2249, 5089
TseFI GTSAC 6 cut(s) 1638, 1724, 2613, 4017, 4576, 4744
Tsp45I GTSAC 6 cut(s) 1638, 1724, 2613, 4017, 4576, 4744
TspGWI ACGGA 2 cut(s) 2192, 2655
Van91I CCANNNNNTGG 2 cut(s) 3277, 3442
Vha464I CTTAAG 1 cut(s) 4609
VpaK11BI GGWCC 9 cut(s) 446, 546, 1084, 1504, 2034, 3433, 3799, 3861, 3996
XagI CCTNNNNNAGG 1 cut(s) 541
XbaI TCTAGA 2 cut(s) 340, 3460
XceI RCATGY 6 cut(s) 1892, 2738, 3829, 4526, 4584, 4880
XcmI CCANNNNNNNNNTGG 1 cut(s) 4756
XmiI GTMKAC 6 cut(s) 2161, 3081, 4031, 4167, 4442, 5222
XmnI GAANNNNTTC 4 cut(s) 258, 987, 1596, 5327
ZraI GACGTC 1 cut(s) 1331
ZrmI AGTACT 3 cut(s) 3186, 4571, 5193
Zsp2I ATGCAT 4 cut(s) 1319, 2481, 3061, 4398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.