FvH4_6g41070

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0016373
Physical Location & Seq
Reverse (-)
32399678 .. 32405390
5713 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g41070.t1

Sequence Viewer

Length: 2079 bp
ATGCTTCAGCTCACACCCGCCCACCCCCTCCCTCCACCACCCCCACCACCACCACCACCCCCCCTCCCTCCACCACAAAGCCTCTCCTTCTCTATCCTCCAAAGCTGTCAAACCCTCAAAGAAGCCACCCAGCTCCACGCCCTCTCCCTCAAAACCGGCGCCTTCACCAACCCCTCCATCGCCTCCCGCCTCTTGTCCCTCTACGCAAACCCCTCCATCAACCACCTGCCCTACGCCCTCTCCGTCTTCTCCCACCTCCCCAACCCCAATCTCATCTCCTTCAACCTCCTCCTCAAATCCCACCTCCTCAACCACCGCTCCCACGACGCCCTCCTCCTCTTCTTCCGCCTCCTCCACCACCATGCGCCCGACAACTTCACGCTCCCCTCCGTCGTCAAGGCCTGCGCGCGCCTTGGCGCCGTTGCGGAAGGGAAGCAGGTGCACGCGCTCGCCCTGAAGATTGGATTAGGGTTGGAGATGTATGTGCAGAGCAGCTTGGTCAGCTTGTACTCGAAATGTGGAGCAATTGAATGTGCACGGAAGGTGTTTGATGAAATGCGTGAGAGGGATTTGGTGGCGTGGAACTCACTGATTGATGGGTACGCGAGGTGTGGGAGGGTTGACGTTGCGGTGGAGCTGTTTGAGGAGATGGAGGAGAGGGATGAGTTTTCGTGGACGGTTTTGGTGGATGGGCTGTCGAAATGTGGGCATGTTAAGAAGGCTAGGGAGGTTTTTGAGAGAATGCCGAGTAAGAATGTGGTTTCGTGGAATGCTATGATTAATGGGTACATGAAAGGTGGGGAGTTTGAGAAGGCAAGGGAGTTGTTTGGTCGGATGGGGAGTAGGGATGTGATAAGCTGGAATTCGATGATTTCTGGGTATGAGTTTAATGGGCGGTTTGGGGAGGCGTTGGAGTTGTTTCGAGAAGTGTTGGAGGAGGATGTTAGGCCGACTCCTGCTACATTGGTCAGTGTGCTTTCTGCGGTTTCGGGATTGGCTGCTTTGAGTAAGGGGAGGATAGTTCATTCTGTGATGGTGAAACATGGGTTTGAATTGGAGGGTGTGCTTGGTACGTCGTTGATAGATATGTATTCTAAGTGTGGAAGCATAGACAGTGCAATGGCTGTGTTTGAAGGGATACAGAGGAAGAAAGTGGGGCATTGGACGGCTATAATTGTTGGTTTAGGAATGCATGGCATGGCTGACCAGGTTCTTCAGCTGTTTCTGGAAATGCGCACAAATGGGATGGAGCCTCATGGTATAACTTTTATCGGAATCTTGAATGCTTGCAGCCATGCTGGATTGGTTGATCTTGGTCGTTACTATTTCAATATGATGAGAAAAGATTATGGTATTGAACCCACAATTGAGCACTACGGTTGCTTAGTGGACATTTTATGTCGAGCTGGCTGTTTGGATGAGGCAAAGGATATCATTGGGAGTATGCCAATGAAACCAAACAAATTCATTTGGATGAGTTTACTTAGTGGCGCTCGGATCCATAAAAATGTTGAAATTGGTGATTATGCTGCTCAACATCTGATTGAGGTGTCTCCAGATACTATTGGATGCTACGTTGTGCTCTCTAACATGTATGCTGCAGCTGATCAGTGGGAGAAAGTTTCACATGTAAGAGAAATGATGAAAAAGAGAGCTGTCAGAAAGGACCCGGGATGCAGTAGCATAGAACACAGAGGTATGCTTCATGAGTTTATTGTAGGCGACAAATCCCATCCCCAGACAAAAGAGATATATTCCAAGTTGAGTGAGGTGAGAGAGAAACTGAAATCTGCAGGACATGTTCCCGACACGAGCCAAGTTTTATTGTGTCTTGAGGATGAAAAGGAGAAGGAAGCTGAACTGGAAAACCATAGCGAGAGATTGGCTATTTCATTTGGTCTCATTAATTTGGAACCGAGGAGTCCTATTCGCATCATAAAGAATCTTCGTGTCTGTAATGATTGCCATTCTGTCACTAAATTCCTTTCCAAGATCTATAATCGTGAAATTGTTGTCAGAGATAATAGCCGTTTCCATCACTTCGCCAATGGGTCATGTTCTTGCAAAGATTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

693

Amino Acids

77.31

Weight (kDa)

7.17

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 189 - 218 1.4e-09 PPR repeat
PPR_2 PF13041 190 - 220 3e-08 PPR repeat family
PPR PF01535 192 - 220 1.7e-09 PPR repeat
PPR PF01535 223 - 253 1.8e-06 PPR repeat
PPR_2 PF13041 251 - 283 1.9e-07 PPR repeat family
PPR PF01535 254 - 283 2.4e-08 PPR repeat
PPR_2 PF13041 282 - 328 3.2e-07 PPR repeat family
PPR PF01535 285 - 314 6.4e-07 PPR repeat
E_motif PF20431 501 - 563 4.1e-18 E motif
Eplus_motif PF20430 569 - 592 4.3e-09 E+ motif
DYW_deaminase PF14432 599 - 692 9.2e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016373)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g41070
malus_domestica MD09G1122400.v1.1 MD17G1113300.v1.1
prunus_persica Prupe.3G201100_v2.0.a1
pyrus_communis pycom09g04680
rosa_chinensis RchiOBHm_Chr2g0156631
rosa_laevigata RLG00000020926
rosa_multiflora Rmu_co8328357.1_g000001
rosa_roxburghii Rroxscaffold_2G00092890
rosa_rugosa Rorug02G0454800
rosa_samantha Rh2AG520400 Rh2BG533400 Rh2CG505400 Rh2DG542200
rosa_wichuraiana Rw2G042940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 234, 427
Acc16I TGCGCA 1 cut(s) 1235
Acc36I ACCTGC 2 cut(s) 234, 427
AccB1I GGYRCC 2 cut(s) 158, 416
AccBSI CCGCTC 1 cut(s) 318
AccII CGCG 4 cut(s) 407, 409, 446, 605
AciI CCGC 8 cut(s) 18, 187, 316, 346, 425, 629, 895, 983
AclWI GGATC 2 cut(s) 1492, 1505
AcsI RAATTY 3 cut(s) 862, 1463, 1979
AcuI CTGAAG 2 cut(s) 476, 1199
AcyI GRCGYC 3 cut(s) 159, 327, 417
AfaI GTAC 4 cut(s) 509, 602, 788, 1072
AflIII ACRYGT 3 cut(s) 1590, 1627, 1798
AgsI TTSAA 8 cut(s) 283, 530, 1052, 1133, 1282, 1330, 1358, 1514
AjnI CCWGG 1 cut(s) 1206
Alw21I GWGCWC 4 cut(s) 444, 538, 1374, 1584
Alw26I GTCTC 2 cut(s) 1557, 1904
Alw44I GTGCAC 2 cut(s) 440, 534
AlwI GGATC 2 cut(s) 1492, 1505
Ama87I CYCGRG 1 cut(s) 1669
AoxI GGCC 2 cut(s) 399, 947
ApaLI GTGCAC 2 cut(s) 440, 534
ApeKI GCWGC 6 cut(s) 492, 998, 1290, 1529, 1598, 1601
ApoI RAATTY 3 cut(s) 862, 1463, 1979
AseI ATTAAT 2 cut(s) 780, 1905
AspLEI GCGC 9 cut(s) 161, 367, 407, 409, 411, 419, 448, 1236, 1493
AspS9I GGNCC 1 cut(s) 1666
AsuC2I CCSGG 2 cut(s) 1670, 1671
AsuHPI GGTGA 4 cut(s) 157, 1048, 1532, 1783
AvaI CYCGRG 1 cut(s) 1669
AvaII GGWCC 1 cut(s) 1666
BaeGI GKGCMC 2 cut(s) 444, 538
BamHI GGATCC 1 cut(s) 1497
BanI GGYRCC 2 cut(s) 158, 416
BauI CACGAG 1 cut(s) 1810
BbsI GAAGAC 1 cut(s) 238
Bbv12I GWGCWC 4 cut(s) 444, 538, 1374, 1584
BbvI GCAGC 6 cut(s) 504, 985, 1302, 1516, 1585, 1613
BceAI ACGGC 3 cut(s) 404, 1182, 2013
BciT130I CCWGG 1 cut(s) 1208
BciVI GTATCC 1 cut(s) 1131
BclI TGATCA 1 cut(s) 1606
BcnI CCSGG 2 cut(s) 1670, 1671
BcoDI GTCTC 2 cut(s) 1557, 1904
BfaI CTAG 1 cut(s) 723
BfmI CTRYAG 2 cut(s) 1599, 1791
BfoI RGCGCY 3 cut(s) 162, 420, 1494
BfuAI ACCTGC 2 cut(s) 234, 427
BfuI GTATCC 1 cut(s) 1131
BglII AGATCT 1 cut(s) 1992
BisI GCNGC 6 cut(s) 493, 999, 1291, 1530, 1599, 1602
BlsI GCNGC 6 cut(s) 494, 1000, 1292, 1531, 1600, 1603
Bme1390I CCNGG 3 cut(s) 1208, 1670, 1671
Bme18I GGWCC 1 cut(s) 1666
BmeT110I CYCGRG 1 cut(s) 1669
BmgT120I GGNCC 1 cut(s) 1666
BmiI GGNNCC 6 cut(s) 160, 418, 1251, 1499, 1668, 1914
BmrFI CCNGG 3 cut(s) 1208, 1670, 1671
BmsI GCATC 3 cut(s) 1559, 1664, 1941
BpiI GAAGAC 1 cut(s) 238
BpmI CTGGAG 1 cut(s) 1539
BpuEI CTTGAG 1 cut(s) 1853
BpuMI CCSGG 2 cut(s) 1670, 1671
BsaHI GRCGYC 3 cut(s) 159, 327, 417
BsaI GGTCTC 1 cut(s) 1904
BsaJI CCNNGG 3 cut(s) 412, 1669, 1916
BsaXI ACNNNNNCTCC 8 cut(s) 48, 78, 128, 158, 224, 254, 302, 332
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 1 cut(s) 1866
Bse3DI GCAATG 1 cut(s) 1125
BseBI CCWGG 1 cut(s) 1208
BseDI CCNNGG 3 cut(s) 412, 1669, 1916
BseMI GCAATG 1 cut(s) 1125
BseNI ACTGG 1 cut(s) 1866
BsePI GCGCGC 2 cut(s) 405, 407
BseSI GKGCMC 2 cut(s) 444, 538
BseXI GCAGC 6 cut(s) 504, 985, 1302, 1516, 1585, 1613
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 506
Bsh1236I CGCG 4 cut(s) 407, 409, 446, 605
BshFI GGCC 2 cut(s) 401, 949
BshNI GGYRCC 2 cut(s) 158, 416
BsiHKAI GWGCWC 4 cut(s) 444, 538, 1374, 1584
BsiHKCI CYCGRG 1 cut(s) 1669
BsiSI CCGG 2 cut(s) 156, 1670
BslFI GGGAC 1 cut(s) 181
BsmAI GTCTC 2 cut(s) 1557, 1904
BsmFI GGGAC 1 cut(s) 181
BsmI GAATGC 4 cut(s) 747, 775, 1194, 1288
BsnI GGCC 2 cut(s) 401, 949
Bso31I GGTCTC 1 cut(s) 1904
BsoBI CYCGRG 1 cut(s) 1669
Bsp1286I GDGCHC 4 cut(s) 444, 538, 1374, 1584
Bsp143I GATC 4 cut(s) 1309, 1497, 1606, 1992
BspACI CCGC 8 cut(s) 18, 187, 316, 346, 425, 629, 895, 983
BspANI GGCC 2 cut(s) 401, 949
BspFNI CGCG 4 cut(s) 407, 409, 446, 605
BspHI TCATGA 1 cut(s) 1705
BspLI GGNNCC 6 cut(s) 160, 418, 1251, 1499, 1668, 1914
BspMAI CTGCAG 2 cut(s) 1603, 1795
BspMI ACCTGC 2 cut(s) 234, 427
BspPI GGATC 2 cut(s) 1492, 1505
BspT107I GGYRCC 2 cut(s) 158, 416
BspTNI GGTCTC 1 cut(s) 1904
BsrBI CCGCTC 1 cut(s) 318
BsrDI GCAATG 1 cut(s) 1125
BsrFI RCCGGY 1 cut(s) 155
BsrI ACTGG 1 cut(s) 1866
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 3 cut(s) 412, 1669, 1916
BssHII GCGCGC 2 cut(s) 405, 407
BssMI GATC 4 cut(s) 1309, 1497, 1606, 1992
BssNI GRCGYC 3 cut(s) 159, 327, 417
BssSI CACGAG 1 cut(s) 1810
BssT1I CCWWGG 1 cut(s) 412
Bst2BI CACGAG 1 cut(s) 1810
Bst2UI CCWGG 1 cut(s) 1208
Bst4CI ACNGT 3 cut(s) 679, 1115, 1379
Bst6I CTCTTC 1 cut(s) 344
BstACI GRCGYC 3 cut(s) 159, 327, 417
BstC8I GCNNGC 7 cut(s) 403, 407, 409, 444, 450, 1288, 1408
BstDEI CTNAG 3 cut(s) 1095, 1384, 1484
BstFNI CGCG 4 cut(s) 407, 409, 446, 605
BstH2I RGCGCY 3 cut(s) 162, 420, 1494
BstHHI GCGC 9 cut(s) 161, 367, 407, 409, 411, 419, 448, 1236, 1493
BstKTI GATC 4 cut(s) 1312, 1500, 1609, 1995
BstMAI GTCTC 2 cut(s) 1557, 1904
BstMBI GATC 4 cut(s) 1309, 1497, 1606, 1992
BstMWI GCNNNNNNNGC 1 cut(s) 501
BstNI CCWGG 1 cut(s) 1208
BstNSI RCATGY 4 cut(s) 713, 1594, 1631, 1802
BstSCI CCNGG 3 cut(s) 1206, 1668, 1669
BstSFI CTRYAG 2 cut(s) 1599, 1791
BstSLI GKGCMC 2 cut(s) 444, 538
BstUI CGCG 4 cut(s) 407, 409, 446, 605
BstV1I GCAGC 6 cut(s) 504, 985, 1302, 1516, 1585, 1613
BstV2I GAAGAC 1 cut(s) 238
BstX2I RGATCY 2 cut(s) 1497, 1992
BstYI RGATCY 2 cut(s) 1497, 1992
BsuI GTATCC 1 cut(s) 1131
BsuRI GGCC 2 cut(s) 401, 949
BtgZI GCGATG 1 cut(s) 163
BtsIMutI CAGTG 4 cut(s) 587, 976, 1120, 1616
BveI ACCTGC 2 cut(s) 234, 427
Cac8I GCNNGC 7 cut(s) 403, 407, 409, 444, 450, 1288, 1408
CciI TCATGA 1 cut(s) 1705
CfoI GCGC 9 cut(s) 161, 367, 407, 409, 411, 419, 448, 1236, 1493
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 1 cut(s) 1666
Cfr9I CCCGGG 1 cut(s) 1669
CseI GACGC 1 cut(s) 335
CsiI ACCWGGT 1 cut(s) 1206
Csp6I GTAC 4 cut(s) 508, 601, 787, 1071
CviQI GTAC 4 cut(s) 508, 601, 787, 1071
DdeI CTNAG 3 cut(s) 1095, 1384, 1484
DinI GGCGCC 2 cut(s) 160, 418
DpnI GATC 4 cut(s) 1311, 1499, 1608, 1994
DpnII GATC 4 cut(s) 1309, 1497, 1606, 1992
Eam1104I CTCTTC 1 cut(s) 344
EarI CTCTTC 1 cut(s) 344
EciI GGCGGA 1 cut(s) 335
Eco130I CCWWGG 1 cut(s) 412
Eco147I AGGCCT 1 cut(s) 401
Eco31I GGTCTC 1 cut(s) 1904
Eco32I GATATC 1 cut(s) 1432
Eco47I GGWCC 1 cut(s) 1666
Eco57I CTGAAG 2 cut(s) 476, 1199
Eco88I CYCGRG 1 cut(s) 1669
EcoO109I RGGNCCY 1 cut(s) 1666
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 1 cut(s) 1206
EcoRV GATATC 1 cut(s) 1432
EcoT14I CCWWGG 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 1194
EgeI GGCGCC 2 cut(s) 160, 418
EheI GGCGCC 2 cut(s) 160, 418
ErhI CCWWGG 1 cut(s) 412
FaqI GGGAC 1 cut(s) 181
FauI CCCGC 2 cut(s) 25, 194
FbaI TGATCA 1 cut(s) 1606
Fnu4HI GCNGC 6 cut(s) 493, 999, 1291, 1530, 1599, 1602
Fsp4HI GCNGC 6 cut(s) 493, 999, 1291, 1530, 1599, 1602
FspAI RTGCGCAY 1 cut(s) 1235
FspBI CTAG 1 cut(s) 723
FspI TGCGCA 1 cut(s) 1235
GlaI GCGC 9 cut(s) 160, 366, 406, 408, 410, 418, 447, 1235, 1492
GluI GCNGC 6 cut(s) 493, 999, 1291, 1530, 1599, 1602
GsaI CCCAGC 1 cut(s) 133
GsuI CTGGAG 1 cut(s) 1539
HaeII RGCGCY 3 cut(s) 162, 420, 1494
HaeIII GGCC 2 cut(s) 401, 949
HapII CCGG 2 cut(s) 156, 1670
HgaI GACGC 1 cut(s) 335
HhaI GCGC 9 cut(s) 161, 367, 407, 409, 411, 419, 448, 1236, 1493
Hin1I GRCGYC 3 cut(s) 159, 327, 417
Hin6I GCGC 9 cut(s) 159, 365, 405, 407, 409, 417, 446, 1234, 1491
HinP1I GCGC 9 cut(s) 159, 365, 405, 407, 409, 417, 446, 1234, 1491
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HinfI GANTC 4 cut(s) 952, 1275, 1921, 1942
HpaII CCGG 2 cut(s) 156, 1670
HphI GGTGA 4 cut(s) 157, 1048, 1532, 1783
Hpy166II GTNNAC 6 cut(s) 442, 536, 622, 675, 1390, 1481
Hpy188I TCNGA 6 cut(s) 834, 1274, 1497, 1542, 1661, 2018
Hpy188III TCNNGA 9 cut(s) 923, 990, 1226, 1279, 1556, 1706, 1805, 1832, 2003
Hpy8I GTNNAC 6 cut(s) 442, 536, 622, 675, 1390, 1481
Hpy99I CGWCG 3 cut(s) 329, 395, 1078
HpyAV CCTTC 9 cut(s) 97, 172, 289, 422, 535, 712, 805, 1127, 1843
HpyCH4III ACNGT 3 cut(s) 679, 1115, 1379
HpyCH4IV ACGT 3 cut(s) 624, 1073, 1575
HpyF10VI GCNNNNNNNGC 1 cut(s) 501
HpyF3I CTNAG 3 cut(s) 1095, 1384, 1484
HpySE526I ACGT 3 cut(s) 624, 1073, 1575
Hsp92I GRCGYC 3 cut(s) 159, 327, 417
HspAI GCGC 9 cut(s) 159, 365, 405, 407, 409, 417, 446, 1234, 1491
KasI GGCGCC 2 cut(s) 158, 416
Ksp22I TGATCA 1 cut(s) 1606
Kzo9I GATC 4 cut(s) 1309, 1497, 1606, 1992
LmnI GCTCC 6 cut(s) 138, 323, 387, 521, 634, 1249
Lsp1109I GCAGC 6 cut(s) 504, 985, 1302, 1516, 1585, 1613
LweI GCATC 3 cut(s) 1559, 1664, 1941
MabI ACCWGGT 1 cut(s) 1206
MaeI CTAG 1 cut(s) 723
MaeII ACGT 3 cut(s) 624, 1073, 1575
MaeIII GTNAC 2 cut(s) 1319, 1972
MalI GATC 4 cut(s) 1311, 1499, 1608, 1994
MbiI CCGCTC 1 cut(s) 318
MboI GATC 4 cut(s) 1309, 1497, 1606, 1992
MboII GAAGA 7 cut(s) 238, 331, 334, 469, 1159, 1205, 1937
MfeI CAATTG 2 cut(s) 525, 1365
MflI RGATCY 2 cut(s) 1497, 1992
MhlI GDGCHC 4 cut(s) 444, 538, 1374, 1584
Mly113I GGCGCC 2 cut(s) 159, 417
MlyI GAGTC 2 cut(s) 946, 1930
MmeI TCCRAC 4 cut(s) 453, 812, 891, 912
Mph1103I ATGCAT 1 cut(s) 1194
MseI TTAA 4 cut(s) 714, 780, 888, 1905
MslI CAYNNNNRTG 3 cut(s) 360, 1472, 1506
MspA1I CMGCKG 2 cut(s) 1219, 1604
MspI CCGG 2 cut(s) 156, 1670
MspR9I CCNGG 3 cut(s) 1208, 1670, 1671
MunI CAATTG 2 cut(s) 525, 1365
Mva1269I GAATGC 4 cut(s) 747, 775, 1194, 1288
MvaI CCWGG 1 cut(s) 1208
MvnI CGCG 4 cut(s) 407, 409, 446, 605
MwoI GCNNNNNNNGC 1 cut(s) 501
NarI GGCGCC 2 cut(s) 159, 417
NciI CCSGG 2 cut(s) 1670, 1671
NdeII GATC 4 cut(s) 1309, 1497, 1606, 1992
NlaIV GGNNCC 6 cut(s) 160, 418, 1251, 1499, 1668, 1914
NmeAIII GCCGAG 1 cut(s) 771
NmuCI GTSAC 1 cut(s) 1972
NsbI TGCGCA 1 cut(s) 1235
NsiI ATGCAT 1 cut(s) 1194
NspI RCATGY 4 cut(s) 713, 1594, 1631, 1802
PagI TCATGA 1 cut(s) 1705
PaqCI CACCTGC 2 cut(s) 234, 427
PauI GCGCGC 2 cut(s) 405, 407
PceI AGGCCT 1 cut(s) 401
PciI ACATGT 3 cut(s) 1590, 1627, 1798
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PctI GAATGC 4 cut(s) 747, 775, 1194, 1288
PfeI GAWTC 2 cut(s) 1275, 1942
PkrI GCNGC 6 cut(s) 494, 1000, 1292, 1531, 1600, 1603
PleI GAGTC 2 cut(s) 946, 1929
PluTI GGCGCC 2 cut(s) 162, 420
PpsI GAGTC 2 cut(s) 946, 1929
PpuMI RGGWCCY 1 cut(s) 1666
PscI ACATGT 3 cut(s) 1590, 1627, 1798
PshBI ATTAAT 2 cut(s) 780, 1905
Psp5II RGGWCCY 1 cut(s) 1666
Psp6I CCWGG 1 cut(s) 1206
PspFI CCCAGC 1 cut(s) 129
PspGI CCWGG 1 cut(s) 1206
PspN4I GGNNCC 6 cut(s) 160, 418, 1251, 1499, 1668, 1914
PspPI GGNCC 1 cut(s) 1666
PspPPI RGGWCCY 1 cut(s) 1666
PstI CTGCAG 2 cut(s) 1603, 1795
PsuI RGATCY 2 cut(s) 1497, 1992
PteI GCGCGC 2 cut(s) 405, 407
PvuII CAGCTG 2 cut(s) 1219, 1604
RsaI GTAC 4 cut(s) 509, 602, 788, 1072
RsaNI GTAC 4 cut(s) 508, 601, 787, 1071
RseI CAYNNNNRTG 3 cut(s) 360, 1472, 1506
SaqAI TTAA 4 cut(s) 714, 780, 888, 1905
SatI GCNGC 6 cut(s) 493, 999, 1291, 1530, 1599, 1602
Sau3AI GATC 4 cut(s) 1309, 1497, 1606, 1992
Sau96I GGNCC 1 cut(s) 1666
SchI GAGTC 2 cut(s) 946, 1930
ScrFI CCNGG 3 cut(s) 1208, 1670, 1671
SduI GDGCHC 4 cut(s) 444, 538, 1374, 1584
SexAI ACCWGGT 1 cut(s) 1206
SfaNI GCATC 3 cut(s) 1559, 1664, 1941
SfcI CTRYAG 2 cut(s) 1599, 1791
SfoI GGCGCC 2 cut(s) 160, 418
SinI GGWCC 1 cut(s) 1666
SmaI CCCGGG 1 cut(s) 1671
SmiMI CAYNNNNRTG 3 cut(s) 360, 1472, 1506
SmlI CTYRAG 1 cut(s) 1832
SmoI CTYRAG 1 cut(s) 1832
SseBI AGGCCT 1 cut(s) 401
SsiI CCGC 8 cut(s) 18, 187, 316, 346, 425, 629, 895, 983
SspDI GGCGCC 2 cut(s) 158, 416
SspMI CTAG 1 cut(s) 723
StuI AGGCCT 1 cut(s) 401
StyD4I CCNGG 3 cut(s) 1206, 1668, 1669
StyI CCWWGG 1 cut(s) 412
TaaI ACNGT 3 cut(s) 679, 1115, 1379
TaiI ACGT 3 cut(s) 627, 1076, 1578
TaqI TCGA 5 cut(s) 512, 698, 866, 922, 1402
TatI WGTACW 1 cut(s) 507
TfiI GAWTC 2 cut(s) 1275, 1942
Tru1I TTAA 4 cut(s) 714, 780, 888, 1905
Tru9I TTAA 4 cut(s) 714, 780, 888, 1905
TscAI CASTG 4 cut(s) 594, 976, 1120, 1616
TseFI GTSAC 1 cut(s) 1972
TseI GCWGC 6 cut(s) 492, 998, 1290, 1529, 1598, 1601
Tsp45I GTSAC 1 cut(s) 1972
TspDTI ATGAA 9 cut(s) 567, 806, 1013, 1456, 1466, 1658, 1694, 1854, 1881
TspGWI ACGGA 3 cut(s) 232, 379, 553
TspMI CCCGGG 1 cut(s) 1669
TspRI CASTG 4 cut(s) 594, 976, 1120, 1616
VneI GTGCAC 2 cut(s) 440, 534
VpaK11BI GGWCC 1 cut(s) 1666
VspI ATTAAT 2 cut(s) 780, 1905
XapI RAATTY 3 cut(s) 862, 1463, 1979
XceI RCATGY 4 cut(s) 713, 1594, 1631, 1802
XmaI CCCGGG 1 cut(s) 1669
XspI CTAG 1 cut(s) 723
Zsp2I ATGCAT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.