pycom09g04680

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0016373
Physical Location & Seq
Forward (+)
3455781 .. 3458581
2801 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g04680.2

Sequence Viewer

Length: 2160 bp
ATGCTTCAGCTCACACCATCTCTCTCTCTCCTCCACAAACCATTTCTCTCTCCTCAAACCCTAAACCCCTTCCGGCTTCTCCAAACATGCAAAACCCTACAAGAAGCAGAGCAGCACCACGCCCTGTTTCTCAAGACCGGAACTTTCAGCCACCCTTCAGTCGCTTCCTGCTTCCTTTCTCTCTACGCCGACCCCAAAATCAACAGCCTCGACTACGCCCGCTCCGTCTTCGACCAAATCGAACAACCCACGTTGGTCTCTTGGAACGTTCTCATCAAATGCTACGTCGGAAACCAGCGGTCGCATGATGCCATTGTTTTGTTCTATGAATTGGTTCATGAGCTTGTTCCCGATAATTTCACTGTGCCGTGCGTGATTAAGGGTTGCGCTCGGTTGAATGCGATTGAGGAAGGGAAGCAGATTCATGGGTTGGTGTTGAAAATTGGGCTTGGGTTGGATAAGTTTGTGCAGAGCAGTTTGGTGAGTTTGTACTCGAAATGTGGTGAGATTGGTTTGGCTCGGAAGGTGTTTGATGAAATGCGTGACCGAGATTTGGTAACTTGGAATTCGTTGGTGGATGGGTATGCGAGGTGTGGAGAAGTTGAAGTGGCAATGGAGTTGTTTGATGAAATGCAGGAGAGGGATTTGTTCTCTTGGACTGTTTTGGTCGATGGGTTGTCGAAATGCGGGAAGGTGGAGATGGCTAGGGAGCTGTTTGATAGGATGCCGAATAGAAATTCGGTTTCTTGGAATGCCATGATTAATGGGTACATGAAAGCTGGAGACTTTGAGACGGCTCGTGAATTATTTAGTGGGATGCCGGCAAGAGATGTGATAACTTGGAATTCAATGATTGCAGGTTATGAATTTAATGGGAGGTTTATGGAAGCATTGGAGTTGTTTCAAGAAATTTTGAAAGAAGGTGTCATGCCTAGTCATGCTACATTGGTCAGTGCTCTTTCAGCCGTTTCGGGATTAGCTATCCTGAGTAAGGGGAGATGGATTCATTCTTTCATGGTAAAACATGGATTTGAGTTAGATGGCGTGCTTGGTACATCCTTGATTGATATGTATTCCAAGTGTGGGAGCATTGAGAATGCTCTGACCTTATTTCGAGCTATACACAGGAAGAAATTGGGGCACTGGACTTCTATAATTGTTGGTTTAGGAATGCATGGTATGGCTGACCAAGTTCTTGAGCTATTTCTCGAGATGAGGAAGAATGGAATGCAGCCTCATGCTATAACTTTTATTGGAGTCTTGAATGCATGTAGTCATGCGGGATTGGTCGATCTTGGCCGTTTCTATTTCAATCTGATGACAAATGATTATGGAATTGAACCCACAATTGAACACTACGGTTGCTTTGTAGACATTTTATGTCGGGCTGGCTGTCTGGATGAGGCGAAGAATGTCATTGAAAGTATGCCCATGAAACCAAACAAAGTAATCTGGATGAGTTTGCTCAGTGGTGCTCGGAATCATGGAAATGTTGAACTTGGCGATTATGCTGCTCGTCACCTGATTGAAGTGTCTCCCGACACTATTGGATGCTATGTTGTTCTTTCTAACATGTATGCTGCAGCTGATCAGTGGGAGAAAGTTTCACAGGTAAGAGAAATGATGAGAACGAGAGGAGTCAAAAAGGACCCGGGATGCAGTTCCATAGAGCACAGAGGTGTGCTTCATGAGTTTGTTGTGGGTGATAAATCACATCCTCGGACAGAAGAGATATATTTGAAGTTGAGTGAGATGACAGAGAAACTGAAATCTGTAGGACATGTTCCTGACACAAGCCAAGTTCTGTTGTGTCTTGAAGAGGAAAAAGAGAAGGAAGCTGAACTGGAAAACCATAGTGAAAGATTGGCTATTGCATTTGGTCTCATTAATTCGGAAGCTGGGAGTCCTATTCGCATTATAAAGAATCTTCGTAAATGGCTCATGTTCTTGCAAAGATTTTTGGTGACTGACTTGTTTGTCTGCTGCATTGACGGCTGTGTTCAGCTGCTCACAGCCTCAAAGCAAGAAGCATCAGAATGCATCTACCTCTATGCTTGCGCTCTTAAAATTGGAGCAGCTATTGTACAGGCAGTCTTGATGCGTGTCCGGATGCTGAAACTCTTGAAATTAGAATGCAACTGCAGTCCCTGTATTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

720

Amino Acids

80.66

Weight (kDa)

6.11

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016373)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g41070
malus_domestica MD09G1122400.v1.1 MD17G1113300.v1.1
prunus_persica Prupe.3G201100_v2.0.a1
pyrus_communis pycom09g04680
rosa_chinensis RchiOBHm_Chr2g0156631
rosa_laevigata RLG00000020926
rosa_multiflora Rmu_co8328357.1_g000001
rosa_roxburghii Rroxscaffold_2G00092890
rosa_rugosa Rorug02G0454800
rosa_samantha Rh2AG520400 Rh2BG533400 Rh2CG505400 Rh2DG542200
rosa_wichuraiana Rw2G042940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1919
AasI GACNNNNNNGTC 1 cut(s) 1976
Acc36I ACCTGC 1 cut(s) 848
AccBSI CCGCTC 1 cut(s) 222
AccI GTMKAC 1 cut(s) 1371
AccIII TCCGGA 1 cut(s) 2106
AciI CCGC 4 cut(s) 220, 298, 687, 1280
AclI AACGTT 1 cut(s) 267
AcoI YGGCCR 1 cut(s) 1297
AcsI RAATTY 5 cut(s) 565, 736, 844, 866, 909
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 4 cut(s) 491, 770, 1054, 2085
AfiI CCNNNNNNNGG 4 cut(s) 553, 991, 1083, 2153
AflIII ACRYGT 2 cut(s) 1572, 1780
AleI CACNNNNGTG 1 cut(s) 1677
Alw21I GWGCWC 3 cut(s) 958, 1477, 1674
Alw26I GTCTC 5 cut(s) 262, 777, 785, 1539, 1886
AlwNI CAGNNNCTG 1 cut(s) 2148
Ama87I CYCGRG 2 cut(s) 1208, 1651
Aor13HI TCCGGA 1 cut(s) 2106
AoxI GGCC 1 cut(s) 1297
ApeKI GCWGC 8 cut(s) 112, 1231, 1511, 1580, 1583, 1983, 2005, 2075
ApoI RAATTY 5 cut(s) 565, 736, 844, 866, 909
ArsI GACNNNNNNTTYG 2 cut(s) 270, 302
AseI ATTAAT 2 cut(s) 762, 1887
Asp700I GAANNNNTTC 1 cut(s) 333
AspLEI GCGC 2 cut(s) 389, 2060
AspS9I GGNCC 1 cut(s) 1648
AsuC2I CCSGG 2 cut(s) 1652, 1653
AsuHPI GGTGA 5 cut(s) 493, 515, 1511, 1715, 1975
AvaI CYCGRG 2 cut(s) 1208, 1651
AvaII GGWCC 1 cut(s) 1648
BaeGI GKGCMC 1 cut(s) 1143
BauI CACGAG 1 cut(s) 798
BbsI GAAGAC 1 cut(s) 220
Bbv12I GWGCWC 3 cut(s) 958, 1477, 1674
BbvI GCAGC 8 cut(s) 124, 1243, 1498, 1567, 1595, 1970, 1992, 2087
BccI CCATC 6 cut(s) 25, 572, 665, 694, 993, 1034
BceAI ACGGC 5 cut(s) 352, 810, 950, 1284, 2008
BcgI CGANNNNNNTGC 2 cut(s) 1493, 1527
BclI TGATCA 1 cut(s) 1588
BcnI CCSGG 2 cut(s) 1652, 1653
BcoDI GTCTC 5 cut(s) 262, 777, 785, 1539, 1886
BfaI CTAG 3 cut(s) 705, 933, 2158
BfmI CTRYAG 3 cut(s) 1581, 1773, 2140
BfuAI ACCTGC 1 cut(s) 848
BisI GCNGC 8 cut(s) 113, 1232, 1512, 1581, 1584, 1984, 2006, 2076
BlsI GCNGC 8 cut(s) 114, 1233, 1513, 1582, 1585, 1985, 2007, 2077
Bme1390I CCNGG 2 cut(s) 1652, 1653
Bme18I GGWCC 1 cut(s) 1648
BmeT110I CYCGRG 2 cut(s) 1208, 1651
BmgT120I GGNCC 1 cut(s) 1648
BmiI GGNNCC 1 cut(s) 1650
BmrFI CCNGG 2 cut(s) 1652, 1653
BmsI GCATC 9 cut(s) 298, 714, 807, 1541, 1646, 2039, 2049, 2088, 2100
BpiI GAAGAC 1 cut(s) 220
BpmI CTGGAG 1 cut(s) 801
BpuEI CTTGAG 2 cut(s) 116, 1217
BpuMI CCSGG 2 cut(s) 1652, 1653
BsaI GGTCTC 2 cut(s) 262, 1886
BsaJI CCNNGG 2 cut(s) 1651, 1718
BsaWI WCCGGW 2 cut(s) 137, 2106
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 4 cut(s) 553, 991, 1083, 2153
Bse118I RCCGGY 1 cut(s) 820
Bse1I ACTGG 2 cut(s) 1148, 1848
Bse3DI GCAATG 1 cut(s) 618
BseAI TCCGGA 1 cut(s) 2106
BseDI CCNNGG 2 cut(s) 1651, 1718
BseLI CCNNNNNNNGG 4 cut(s) 553, 991, 1083, 2153
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 2 cut(s) 977, 1480
BseNI ACTGG 2 cut(s) 1148, 1848
BseRI GAGGAG 3 cut(s) 20, 42, 1650
BseSI GKGCMC 1 cut(s) 1143
BseXI GCAGC 8 cut(s) 124, 1243, 1498, 1567, 1595, 1970, 1992, 2087
BseYI CCCAGC 1 cut(s) 1898
BsgI GTGCAG 1 cut(s) 488
Bsh1285I CGRYCG 1 cut(s) 302
BshFI GGCC 1 cut(s) 1299
BsiEI CGRYCG 1 cut(s) 302
BsiHKAI GWGCWC 3 cut(s) 958, 1477, 1674
BsiHKCI CYCGRG 2 cut(s) 1208, 1651
BsiSI CCGG 5 cut(s) 73, 138, 821, 1652, 2107
BslFI GGGAC 1 cut(s) 2130
BslI CCNNNNNNNGG 4 cut(s) 553, 991, 1083, 2153
BsmAI GTCTC 5 cut(s) 262, 777, 785, 1539, 1886
BsmBI CGTCTC 1 cut(s) 785
BsmFI GGGAC 1 cut(s) 2130
BsmI GAATGC 8 cut(s) 403, 757, 1102, 1176, 1233, 1270, 2042, 2138
BsnI GGCC 1 cut(s) 1299
Bso31I GGTCTC 2 cut(s) 262, 1886
BsoBI CYCGRG 2 cut(s) 1208, 1651
Bsp1286I GDGCHC 4 cut(s) 958, 1143, 1477, 1674
Bsp13I TCCGGA 1 cut(s) 2106
Bsp1407I TGTACA 1 cut(s) 2083
Bsp143I GATC 2 cut(s) 1291, 1588
BspACI CCGC 4 cut(s) 220, 298, 687, 1280
BspANI GGCC 1 cut(s) 1299
BspCNI CTCAG 2 cut(s) 978, 1479
BspEI TCCGGA 1 cut(s) 2106
BspHI TCATGA 2 cut(s) 337, 1687
BspLI GGNNCC 1 cut(s) 1650
BspMAI CTGCAG 2 cut(s) 1585, 2144
BspMI ACCTGC 1 cut(s) 848
BspTNI GGTCTC 2 cut(s) 262, 1886
BsrBI CCGCTC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 618
BsrFI RCCGGY 1 cut(s) 820
BsrGI TGTACA 1 cut(s) 2083
BsrI ACTGG 2 cut(s) 1148, 1848
BssAI RCCGGY 1 cut(s) 820
BssECI CCNNGG 2 cut(s) 1651, 1718
BssMI GATC 2 cut(s) 1291, 1588
BssSI CACGAG 1 cut(s) 798
Bst2BI CACGAG 1 cut(s) 798
Bst4CI ACNGT 3 cut(s) 364, 661, 1361
Bst6I CTCTTC 2 cut(s) 1722, 1812
BstAUI TGTACA 1 cut(s) 2083
BstC8I GCNNGC 5 cut(s) 220, 822, 1046, 1390, 2056
BstDEI CTNAG 2 cut(s) 986, 1466
BstENI CCTNNNNNAGG 1 cut(s) 989
BstHHI GCGC 2 cut(s) 389, 2060
BstKTI GATC 2 cut(s) 1294, 1591
BstMAI GTCTC 5 cut(s) 262, 777, 785, 1539, 1886
BstMBI GATC 2 cut(s) 1291, 1588
BstMCI CGRYCG 1 cut(s) 302
BstMWI GCNNNNNNNGC 2 cut(s) 962, 1992
BstNSI RCATGY 4 cut(s) 90, 1272, 1576, 1784
BstSCI CCNGG 2 cut(s) 1650, 1651
BstSFI CTRYAG 3 cut(s) 1581, 1773, 2140
BstSLI GKGCMC 1 cut(s) 1143
BstV1I GCAGC 8 cut(s) 124, 1243, 1498, 1567, 1595, 1970, 1992, 2087
BstV2I GAAGAC 1 cut(s) 220
BsuRI GGCC 1 cut(s) 1299
BtsIMutI CAGTG 5 cut(s) 360, 958, 1141, 1474, 1598
BveI ACCTGC 1 cut(s) 848
Cac8I GCNNGC 5 cut(s) 220, 822, 1046, 1390, 2056
CaiI CAGNNNCTG 1 cut(s) 2148
CciI TCATGA 2 cut(s) 337, 1687
CfoI GCGC 2 cut(s) 389, 2060
Cfr10I RCCGGY 1 cut(s) 820
Cfr13I GGNCC 1 cut(s) 1648
Cfr9I CCCGGG 1 cut(s) 1651
Csp6I GTAC 4 cut(s) 490, 769, 1053, 2084
CviQI GTAC 4 cut(s) 490, 769, 1053, 2084
DdeI CTNAG 2 cut(s) 986, 1466
DpnI GATC 2 cut(s) 1293, 1590
DpnII GATC 2 cut(s) 1291, 1588
DrdI GACNNNNNNGTC 1 cut(s) 1976
DseDI GACNNNNNNGTC 1 cut(s) 1976
EaeI YGGCCR 1 cut(s) 1297
Eam1104I CTCTTC 2 cut(s) 1722, 1812
EarI CTCTTC 2 cut(s) 1722, 1812
Eco31I GGTCTC 2 cut(s) 262, 1886
Eco47I GGWCC 1 cut(s) 1648
Eco57I CTGAAG 1 cut(s) 141
Eco88I CYCGRG 2 cut(s) 1208, 1651
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 1648
EcoRI GAATTC 2 cut(s) 565, 844
EcoT22I ATGCAT 3 cut(s) 1176, 1270, 2042
Esp3I CGTCTC 1 cut(s) 785
FaqI GGGAC 1 cut(s) 2130
FauI CCCGC 3 cut(s) 227, 680, 1273
FbaI TGATCA 1 cut(s) 1588
FblI GTMKAC 1 cut(s) 1371
Fnu4HI GCNGC 8 cut(s) 113, 1232, 1512, 1581, 1584, 1984, 2006, 2076
Fsp4HI GCNGC 8 cut(s) 113, 1232, 1512, 1581, 1584, 1984, 2006, 2076
FspBI CTAG 3 cut(s) 705, 933, 2158
GlaI GCGC 2 cut(s) 388, 2059
GluI GCNGC 8 cut(s) 113, 1232, 1512, 1581, 1584, 1984, 2006, 2076
GsaI CCCAGC 1 cut(s) 1902
GsuI CTGGAG 1 cut(s) 801
HaeIII GGCC 1 cut(s) 1299
HapII CCGG 5 cut(s) 73, 138, 821, 1652, 2107
HhaI GCGC 2 cut(s) 389, 2060
Hin6I GCGC 2 cut(s) 387, 2058
HinP1I GCGC 2 cut(s) 387, 2058
HinfI GANTC 7 cut(s) 421, 1003, 1257, 1480, 1638, 1903, 1924
HpaII CCGG 5 cut(s) 73, 138, 821, 1652, 2107
HphI GGTGA 5 cut(s) 493, 515, 1511, 1715, 1975
Hpy166II GTNNAC 1 cut(s) 1372
Hpy188I TCNGA 8 cut(s) 290, 522, 1104, 1317, 1479, 1722, 1894, 2035
Hpy8I GTNNAC 1 cut(s) 1372
Hpy99I CGWCG 1 cut(s) 290
HpyAV CCTTC 7 cut(s) 79, 165, 404, 517, 685, 914, 1825
HpyCH4III ACNGT 3 cut(s) 364, 661, 1361
HpyCH4IV ACGT 3 cut(s) 251, 267, 285
HpyF10VI GCNNNNNNNGC 2 cut(s) 962, 1992
HpyF3I CTNAG 2 cut(s) 986, 1466
HpySE526I ACGT 3 cut(s) 251, 267, 285
HspAI GCGC 2 cut(s) 387, 2058
Kpn2I TCCGGA 1 cut(s) 2106
KroI GCCGGC 1 cut(s) 820
KroNI GCCGGC 1 cut(s) 822
Ksp22I TGATCA 1 cut(s) 1588
Kzo9I GATC 2 cut(s) 1291, 1588
LmnI GCTCC 4 cut(s) 227, 709, 1086, 2072
Lsp1109I GCAGC 8 cut(s) 124, 1243, 1498, 1567, 1595, 1970, 1992, 2087
LweI GCATC 9 cut(s) 298, 714, 807, 1541, 1646, 2039, 2049, 2088, 2100
MaeI CTAG 3 cut(s) 705, 933, 2158
MaeII ACGT 3 cut(s) 251, 267, 285
MaeIII GTNAC 4 cut(s) 542, 556, 1517, 1963
MalI GATC 2 cut(s) 1293, 1590
MbiI CCGCTC 1 cut(s) 222
MboI GATC 2 cut(s) 1291, 1588
MboII GAAGA 7 cut(s) 220, 1141, 1231, 1420, 1739, 1829, 1919
MfeI CAATTG 1 cut(s) 1347
MhlI GDGCHC 4 cut(s) 958, 1143, 1477, 1674
MlyI GAGTC 3 cut(s) 1266, 1647, 1912
MmeI TCCRAC 2 cut(s) 268, 435
Mph1103I ATGCAT 3 cut(s) 1176, 1270, 2042
MroI TCCGGA 1 cut(s) 2106
MroNI GCCGGC 1 cut(s) 820
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 5 cut(s) 378, 762, 870, 1887, 2064
MslI CAYNNNNRTG 3 cut(s) 1488, 1677, 2035
MspA1I CMGCKG 3 cut(s) 298, 1586, 2005
MspI CCGG 5 cut(s) 73, 138, 821, 1652, 2107
MspR9I CCNGG 2 cut(s) 1652, 1653
MunI CAATTG 1 cut(s) 1347
Mva1269I GAATGC 8 cut(s) 403, 757, 1102, 1176, 1233, 1270, 2042, 2138
MwoI GCNNNNNNNGC 2 cut(s) 962, 1992
NaeI GCCGGC 1 cut(s) 822
NciI CCSGG 2 cut(s) 1652, 1653
NdeII GATC 2 cut(s) 1291, 1588
NgoMIV GCCGGC 1 cut(s) 820
NlaIV GGNNCC 1 cut(s) 1650
NmuCI GTSAC 3 cut(s) 542, 1517, 1963
NsiI ATGCAT 3 cut(s) 1176, 1270, 2042
NspI RCATGY 4 cut(s) 90, 1272, 1576, 1784
OliI CACNNNNGTG 1 cut(s) 1677
PaeR7I CTCGAG 1 cut(s) 1208
PagI TCATGA 2 cut(s) 337, 1687
PciI ACATGT 2 cut(s) 1572, 1780
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 237
PctI GAATGC 8 cut(s) 403, 757, 1102, 1176, 1233, 1270, 2042, 2138
PdiI GCCGGC 1 cut(s) 822
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 4 cut(s) 421, 1003, 1480, 1924
PkrI GCNGC 8 cut(s) 114, 1233, 1513, 1582, 1585, 1985, 2007, 2077
PleI GAGTC 3 cut(s) 1265, 1646, 1911
PpsI GAGTC 3 cut(s) 1265, 1646, 1911
PpuMI RGGWCCY 1 cut(s) 1648
PscI ACATGT 2 cut(s) 1572, 1780
PshBI ATTAAT 2 cut(s) 762, 1887
PsiI TTATAA 1 cut(s) 1919
Psp1406I AACGTT 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 1648
PspFI CCCAGC 1 cut(s) 1898
PspN4I GGNNCC 1 cut(s) 1650
PspPI GGNCC 1 cut(s) 1648
PspPPI RGGWCCY 1 cut(s) 1648
PsrI GAACNNNNNNTAC 2 cut(s) 1767, 1799
PstI CTGCAG 2 cut(s) 1585, 2144
PstNI CAGNNNCTG 1 cut(s) 2148
PvuII CAGCTG 2 cut(s) 1586, 2005
RsaI GTAC 4 cut(s) 491, 770, 1054, 2085
RsaNI GTAC 4 cut(s) 490, 769, 1053, 2084
RseI CAYNNNNRTG 3 cut(s) 1488, 1677, 2035
SaqAI TTAA 5 cut(s) 378, 762, 870, 1887, 2064
SatI GCNGC 8 cut(s) 113, 1232, 1512, 1581, 1584, 1984, 2006, 2076
Sau3AI GATC 2 cut(s) 1291, 1588
Sau96I GGNCC 1 cut(s) 1648
SchI GAGTC 3 cut(s) 1266, 1647, 1912
ScrFI CCNGG 2 cut(s) 1652, 1653
SduI GDGCHC 4 cut(s) 958, 1143, 1477, 1674
SfaNI GCATC 9 cut(s) 298, 714, 807, 1541, 1646, 2039, 2049, 2088, 2100
SfcI CTRYAG 3 cut(s) 1581, 1773, 2140
Sfr274I CTCGAG 1 cut(s) 1208
SinI GGWCC 1 cut(s) 1648
SlaI CTCGAG 1 cut(s) 1208
SmaI CCCGGG 1 cut(s) 1653
SmiMI CAYNNNNRTG 3 cut(s) 1488, 1677, 2035
SmlI CTYRAG 3 cut(s) 131, 1196, 1208
SmoI CTYRAG 3 cut(s) 131, 1196, 1208
SsiI CCGC 4 cut(s) 220, 298, 687, 1280
SspMI CTAG 3 cut(s) 705, 933, 2158
StyD4I CCNGG 2 cut(s) 1650, 1651
TaaI ACNGT 3 cut(s) 364, 661, 1361
TaiI ACGT 3 cut(s) 254, 270, 288
TaqI TCGA 9 cut(s) 210, 231, 240, 494, 669, 680, 1114, 1209, 1290
TaqII GACCGA 1 cut(s) 561
TatI WGTACW 2 cut(s) 489, 2083
TfiI GAWTC 4 cut(s) 421, 1003, 1480, 1924
Tru1I TTAA 5 cut(s) 378, 762, 870, 1887, 2064
Tru9I TTAA 5 cut(s) 378, 762, 870, 1887, 2064
TscAI CASTG 5 cut(s) 367, 958, 1148, 1474, 1598
TseFI GTSAC 3 cut(s) 542, 1517, 1963
TseI GCWGC 8 cut(s) 112, 1231, 1511, 1580, 1583, 1983, 2005, 2075
Tsp45I GTSAC 3 cut(s) 542, 1517, 1963
TspGWI ACGGA 1 cut(s) 214
TspMI CCCGGG 1 cut(s) 1651
TspRI CASTG 5 cut(s) 367, 958, 1148, 1474, 1598
VpaK11BI GGWCC 1 cut(s) 1648
VspI ATTAAT 2 cut(s) 762, 1887
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 5 cut(s) 565, 736, 844, 866, 909
XceI RCATGY 4 cut(s) 90, 1272, 1576, 1784
XhoI CTCGAG 1 cut(s) 1208
XmaI CCCGGG 1 cut(s) 1651
XmiI GTMKAC 1 cut(s) 1371
XmnI GAANNNNTTC 1 cut(s) 333
XspI CTAG 3 cut(s) 705, 933, 2158
Zsp2I ATGCAT 3 cut(s) 1176, 1270, 2042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.