Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10650 AT3G10650 |
| fragaria_vesca | FvH4_7g05430 FvH4_7g05440 FvH4_7g05440 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 |
| malus_domestica | MD02G1257800.v1.1 MD07G1063100.v1.1 |
| prunus_persica | Prupe.2G074800_v2.0.a1 |
| pyrus_communis | pycom02g21880 pycom07g04820 |
| rosa_chinensis | RchiOBHm_Chr1g0332241 |
| rosa_laevigata | RLG00000029683 |
| rosa_multiflora | Rmu_co8444859.1_g000001 Rmu_sc0016174.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00318320 |
| rosa_rugosa | Rorug01G0099200 |
| rosa_samantha | Rh1AG123000 Rh1BG094100 Rh1CG117600 Rh1DG128400 |
| rosa_wichuraiana | Rw1G010030 Rw1G010040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2557 |
| Acc36I | ACCTGC | 4 cut(s) | 1246, 2506, 2557, 2848 |
| Acc65I | GGTACC | 4 cut(s) | 1529, 1600, 1864, 2354 |
| AccB1I | GGYRCC | 7 cut(s) | 92, 416, 1529, 1600, 1864, 2354, 3221 |
| AccBSI | CCGCTC | 1 cut(s) | 316 |
| AccI | GTMKAC | 1 cut(s) | 2529 |
| AccII | CGCG | 1 cut(s) | 3155 |
| AccIII | TCCGGA | 1 cut(s) | 215 |
| AclWI | GGATC | 8 cut(s) | 56, 76, 301, 304, 389, 402, 2058, 2071 |
| AcoI | YGGCCR | 4 cut(s) | 262, 1289, 1351, 3147 |
| AcsI | RAATTY | 6 cut(s) | 486, 771, 1608, 1873, 2159, 2513 |
| AcuI | CTGAAG | 4 cut(s) | 612, 1458, 1605, 2556 |
| AcvI | CACGTG | 1 cut(s) | 1357 |
| AcyI | GRCGYC | 2 cut(s) | 250, 3222 |
| AdeI | CACNNNGTG | 2 cut(s) | 92, 2401 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 201, 391, 861, 1597, 2846, 3176 |
| AflII | CTTAAG | 1 cut(s) | 808 |
| AflIII | ACRYGT | 1 cut(s) | 941 |
| AhlI | ACTAGT | 1 cut(s) | 1757 |
| AjnI | CCWGG | 7 cut(s) | 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| Alw21I | GWGCWC | 4 cut(s) | 125, 540, 1309, 2406 |
| Alw26I | GTCTC | 6 cut(s) | 54, 453, 915, 1843, 1890, 2986 |
| Alw44I | GTGCAC | 1 cut(s) | 2402 |
| AlwI | GGATC | 8 cut(s) | 56, 76, 301, 304, 389, 402, 2058, 2071 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1247, 1583, 2579, 2735 |
| Aor13HI | TCCGGA | 1 cut(s) | 215 |
| AoxI | GGCC | 7 cut(s) | 262, 863, 1289, 1351, 1713, 2038, 3147 |
| ApaI | GGGCCC | 1 cut(s) | 2042 |
| ApaLI | GTGCAC | 1 cut(s) | 2402 |
| ApoI | RAATTY | 6 cut(s) | 486, 771, 1608, 1873, 2159, 2513 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 421, 453 |
| AseI | ATTAAT | 1 cut(s) | 1347 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2149, 2347 |
| Asp718I | GGTACC | 4 cut(s) | 1529, 1600, 1864, 2354 |
| AspLEI | GCGC | 6 cut(s) | 340, 1516, 2249, 2756, 3157, 3224 |
| AspS9I | GGNCC | 5 cut(s) | 437, 1714, 2038, 2039, 2190 |
| AsuC2I | CCSGG | 2 cut(s) | 25, 90 |
| AsuHPI | GGTGA | 9 cut(s) | 321, 726, 807, 890, 1059, 1867, 2079, 3007, 3159 |
| AvaII | GGWCC | 2 cut(s) | 437, 2190 |
| AxyI | CCTNAGG | 2 cut(s) | 196, 390 |
| BaeGI | GKGCMC | 2 cut(s) | 2042, 2406 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1848, 1881 |
| BalI | TGGCCA | 2 cut(s) | 1353, 3149 |
| BamHI | GGATCC | 2 cut(s) | 394, 2063 |
| BanI | GGYRCC | 7 cut(s) | 92, 416, 1529, 1600, 1864, 2354, 3221 |
| BanII | GRGCYC | 4 cut(s) | 23, 540, 1041, 2042 |
| BbrPI | CACGTG | 1 cut(s) | 1357 |
| BbsI | GAAGAC | 3 cut(s) | 226, 354, 2919 |
| Bbv12I | GWGCWC | 4 cut(s) | 125, 540, 1309, 2406 |
| BbvCI | CCTCAGC | 1 cut(s) | 2925 |
| BccI | CCATC | 6 cut(s) | 853, 1150, 1370, 1490, 1810, 1907 |
| BceAI | ACGGC | 4 cut(s) | 237, 300, 1276, 1304 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1286, 1320 |
| BciT130I | CCWGG | 7 cut(s) | 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| BclI | TGATCA | 1 cut(s) | 2896 |
| BcnI | CCSGG | 2 cut(s) | 25, 90 |
| BcoDI | GTCTC | 6 cut(s) | 54, 453, 915, 1843, 1890, 2986 |
| BcuI | ACTAGT | 1 cut(s) | 1757 |
| BfmI | CTRYAG | 4 cut(s) | 333, 1239, 1425, 2874 |
| BfoI | RGCGCY | 2 cut(s) | 341, 3225 |
| BfrI | CTTAAG | 1 cut(s) | 808 |
| BfuAI | ACCTGC | 4 cut(s) | 1246, 2506, 2557, 2848 |
| BglII | AGATCT | 2 cut(s) | 164, 587 |
| BmcAI | AGTACT | 2 cut(s) | 433, 2461 |
| Bme1390I | CCNGG | 9 cut(s) | 25, 90, 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| Bme18I | GGWCC | 2 cut(s) | 437, 2190 |
| BmgT120I | GGNCC | 5 cut(s) | 437, 1714, 2038, 2039, 2190 |
| BmrFI | CCNGG | 9 cut(s) | 25, 90, 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| BmrI | ACTGGG | 1 cut(s) | 3227 |
| BmuI | ACTGGG | 1 cut(s) | 3227 |
| BpiI | GAAGAC | 3 cut(s) | 226, 354, 2919 |
| BpmI | CTGGAG | 6 cut(s) | 51, 423, 477, 1340, 1436, 2440 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2925 |
| BpuEI | CTTGAG | 3 cut(s) | 500, 1653, 2641 |
| BpuMI | CCSGG | 2 cut(s) | 25, 90 |
| Bsa29I | ATCGAT | 1 cut(s) | 526 |
| BsaAI | YACGTR | 2 cut(s) | 1097, 1357 |
| BsaHI | GRCGYC | 2 cut(s) | 250, 3222 |
| BsaI | GGTCTC | 1 cut(s) | 54 |
| BsaJI | CCNNGG | 3 cut(s) | 1881, 2154, 2652 |
| BsaWI | WCCGGW | 2 cut(s) | 215, 2066 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 201, 391, 861, 1597, 2846, 3176 |
| Bse21I | CCTNAGG | 2 cut(s) | 196, 390 |
| Bse3DI | GCAATG | 1 cut(s) | 1746 |
| BseAI | TCCGGA | 1 cut(s) | 215 |
| BseBI | CCWGG | 7 cut(s) | 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| BseCI | ATCGAT | 1 cut(s) | 526 |
| BseDI | CCNNGG | 3 cut(s) | 1881, 2154, 2652 |
| BseGI | GGATG | 5 cut(s) | 1270, 1333, 1802, 2615, 2723 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 201, 391, 861, 1597, 2846, 3176 |
| BseMI | GCAATG | 1 cut(s) | 1746 |
| BseMII | CTCAG | 7 cut(s) | 331, 404, 561, 1026, 1803, 2916, 2997 |
| BseRI | GAGGAG | 1 cut(s) | 2979 |
| BseSI | GKGCMC | 2 cut(s) | 2042, 2406 |
| BseX3I | CGGCCG | 1 cut(s) | 1289 |
| BseYI | CCCAGC | 2 cut(s) | 2371, 3018 |
| BsgI | GTGCAG | 2 cut(s) | 1989, 2667 |
| Bsh1236I | CGCG | 1 cut(s) | 3155 |
| Bsh1285I | CGRYCG | 2 cut(s) | 261, 1292 |
| BshFI | GGCC | 7 cut(s) | 264, 865, 1291, 1353, 1715, 2040, 3149 |
| BshNI | GGYRCC | 7 cut(s) | 92, 416, 1529, 1600, 1864, 2354, 3221 |
| BshVI | ATCGAT | 1 cut(s) | 526 |
| BsiEI | CGRYCG | 2 cut(s) | 261, 1292 |
| BsiHKAI | GWGCWC | 4 cut(s) | 125, 540, 1309, 2406 |
| BsiSI | CCGG | 4 cut(s) | 25, 89, 216, 2067 |
| BsiWI | CGTACG | 1 cut(s) | 254 |
| BslFI | GGGAC | 5 cut(s) | 423, 698, 1574, 2350, 2388 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 201, 391, 861, 1597, 2846, 3176 |
| BsmAI | GTCTC | 6 cut(s) | 54, 453, 915, 1843, 1890, 2986 |
| BsmBI | CGTCTC | 1 cut(s) | 453 |
| BsmFI | GGGAC | 5 cut(s) | 423, 698, 1574, 2350, 2388 |
| BsmI | GAATGC | 1 cut(s) | 544 |
| BsnI | GGCC | 7 cut(s) | 264, 865, 1291, 1353, 1715, 2040, 3149 |
| Bso31I | GGTCTC | 1 cut(s) | 54 |
| Bsp120I | GGGCCC | 1 cut(s) | 2038 |
| Bsp1286I | GDGCHC | 7 cut(s) | 23, 125, 540, 1041, 1309, 2042, 2406 |
| Bsp13I | TCCGGA | 1 cut(s) | 215 |
| BspANI | GGCC | 7 cut(s) | 264, 865, 1291, 1353, 1715, 2040, 3149 |
| BspCNI | CTCAG | 7 cut(s) | 330, 403, 562, 1027, 1802, 2917, 2996 |
| BspDI | ATCGAT | 1 cut(s) | 526 |
| BspEI | TCCGGA | 1 cut(s) | 215 |
| BspFNI | CGCG | 1 cut(s) | 3155 |
| BspHI | TCATGA | 2 cut(s) | 622, 1309 |
| BspMAI | CTGCAG | 1 cut(s) | 1243 |
| BspMI | ACCTGC | 4 cut(s) | 1246, 2506, 2557, 2848 |
| BspPI | GGATC | 8 cut(s) | 56, 76, 301, 304, 389, 402, 2058, 2071 |
| BspT107I | GGYRCC | 7 cut(s) | 92, 416, 1529, 1600, 1864, 2354, 3221 |
| BspTI | CTTAAG | 1 cut(s) | 808 |
| BspTNI | GGTCTC | 1 cut(s) | 54 |
| BsrBI | CCGCTC | 1 cut(s) | 316 |
| BsrDI | GCAATG | 1 cut(s) | 1746 |
| BssECI | CCNNGG | 3 cut(s) | 1881, 2154, 2652 |
| BssNI | GRCGYC | 2 cut(s) | 250, 3222 |
| BssT1I | CCWWGG | 2 cut(s) | 1881, 2154 |
| Bst2UI | CCWGG | 7 cut(s) | 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| Bst6I | CTCTTC | 1 cut(s) | 355 |
| BstACI | GRCGYC | 2 cut(s) | 250, 3222 |
| BstAFI | CTTAAG | 1 cut(s) | 808 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1247, 2240, 2825 |
| BstBAI | YACGTR | 2 cut(s) | 1097, 1357 |
| BstC8I | GCNNGC | 5 cut(s) | 176, 204, 747, 1972, 2245 |
| BstDSI | CCRYGG | 1 cut(s) | 2652 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 389 |
| BstF5I | GGATG | 5 cut(s) | 1270, 1333, 1802, 2615, 2723 |
| BstFNI | CGCG | 1 cut(s) | 3155 |
| BstH2I | RGCGCY | 2 cut(s) | 341, 3225 |
| BstHHI | GCGC | 6 cut(s) | 340, 1516, 2249, 2756, 3157, 3224 |
| BstMAI | GTCTC | 6 cut(s) | 54, 453, 915, 1843, 1890, 2986 |
| BstMCI | CGRYCG | 2 cut(s) | 261, 1292 |
| BstNI | CCWGG | 7 cut(s) | 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| BstNSI | RCATGY | 1 cut(s) | 945 |
| BstSCI | CCNGG | 9 cut(s) | 23, 88, 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| BstSFI | CTRYAG | 4 cut(s) | 333, 1239, 1425, 2874 |
| BstSLI | GKGCMC | 2 cut(s) | 2042, 2406 |
| BstUI | CGCG | 1 cut(s) | 3155 |
| BstV2I | GAAGAC | 3 cut(s) | 226, 354, 2919 |
| BstX2I | RGATCY | 6 cut(s) | 61, 164, 293, 394, 587, 2063 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1361, 2863 |
| BstYI | RGATCY | 6 cut(s) | 61, 164, 293, 394, 587, 2063 |
| BstZI | CGGCCG | 1 cut(s) | 1289 |
| Bsu15I | ATCGAT | 1 cut(s) | 526 |
| Bsu36I | CCTNAGG | 2 cut(s) | 196, 390 |
| BsuRI | GGCC | 7 cut(s) | 264, 865, 1291, 1353, 1715, 2040, 3149 |
| BsuTUI | ATCGAT | 1 cut(s) | 526 |
| BtgI | CCRYGG | 1 cut(s) | 2652 |
| BtsCI | GGATG | 5 cut(s) | 1270, 1333, 1802, 2615, 2723 |
| BtsI | GCAGTG | 3 cut(s) | 275, 1719, 2344 |
| BveI | ACCTGC | 4 cut(s) | 1246, 2506, 2557, 2848 |
| Cac8I | GCNNGC | 5 cut(s) | 176, 204, 747, 1972, 2245 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1247, 1583, 2579, 2735 |
| CciI | TCATGA | 2 cut(s) | 622, 1309 |
| CfoI | GCGC | 6 cut(s) | 340, 1516, 2249, 2756, 3157, 3224 |
| Cfr13I | GGNCC | 5 cut(s) | 437, 1714, 2038, 2039, 2190 |
| ClaI | ATCGAT | 1 cut(s) | 526 |
| CseI | GACGC | 2 cut(s) | 258, 1998 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 855, 890, 2167, 2202, 2641, 2676 |
| DinI | GGCGCC | 1 cut(s) | 3223 |
| DraIII | CACNNNGTG | 2 cut(s) | 92, 2401 |
| EaeI | YGGCCR | 4 cut(s) | 262, 1289, 1351, 3147 |
| EagI | CGGCCG | 1 cut(s) | 1289 |
| Eam1104I | CTCTTC | 1 cut(s) | 355 |
| EarI | CTCTTC | 1 cut(s) | 355 |
| EciI | GGCGGA | 1 cut(s) | 371 |
| Ecl136II | GAGCTC | 1 cut(s) | 538 |
| EclXI | CGGCCG | 1 cut(s) | 1289 |
| Eco130I | CCWWGG | 2 cut(s) | 1881, 2154 |
| Eco24I | GRGCYC | 4 cut(s) | 23, 540, 1041, 2042 |
| Eco31I | GGTCTC | 1 cut(s) | 54 |
| Eco47I | GGWCC | 2 cut(s) | 437, 2190 |
| Eco52I | CGGCCG | 1 cut(s) | 1289 |
| Eco53kI | GAGCTC | 1 cut(s) | 538 |
| Eco57I | CTGAAG | 4 cut(s) | 612, 1458, 1605, 2556 |
| Eco72I | CACGTG | 1 cut(s) | 1357 |
| Eco81I | CCTNAGG | 2 cut(s) | 196, 390 |
| EcoICRI | GAGCTC | 1 cut(s) | 538 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 389 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2039, 2190 |
| EcoRI | GAATTC | 1 cut(s) | 2159 |
| EcoRII | CCWGG | 7 cut(s) | 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| EcoT14I | CCWWGG | 2 cut(s) | 1881, 2154 |
| EcoT22I | ATGCAT | 1 cut(s) | 2944 |
| EcoT38I | GRGCYC | 4 cut(s) | 23, 540, 1041, 2042 |
| EgeI | GGCGCC | 1 cut(s) | 3223 |
| EheI | GGCGCC | 1 cut(s) | 3223 |
| ErhI | CCWWGG | 2 cut(s) | 1881, 2154 |
| Esp3I | CGTCTC | 1 cut(s) | 453 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 211, 243 |
| FaqI | GGGAC | 5 cut(s) | 423, 698, 1574, 2350, 2388 |
| FauI | CCCGC | 3 cut(s) | 195, 321, 2480 |
| FbaI | TGATCA | 1 cut(s) | 2896 |
| FblI | GTMKAC | 1 cut(s) | 2529 |
| FokI | GGATG | 5 cut(s) | 1257, 1340, 1789, 2602, 2710 |
| FriOI | GRGCYC | 4 cut(s) | 23, 540, 1041, 2042 |
| GlaI | GCGC | 6 cut(s) | 339, 1515, 2248, 2755, 3156, 3223 |
| GsaI | CCCAGC | 2 cut(s) | 2375, 3022 |
| GsuI | CTGGAG | 6 cut(s) | 51, 423, 477, 1340, 1436, 2440 |
| HaeII | RGCGCY | 2 cut(s) | 341, 3225 |
| HaeIII | GGCC | 7 cut(s) | 264, 865, 1291, 1353, 1715, 2040, 3149 |
| HapII | CCGG | 4 cut(s) | 25, 89, 216, 2067 |
| HgaI | GACGC | 2 cut(s) | 258, 1998 |
| HhaI | GCGC | 6 cut(s) | 340, 1516, 2249, 2756, 3157, 3224 |
| Hin1I | GRCGYC | 2 cut(s) | 250, 3222 |
| Hin6I | GCGC | 6 cut(s) | 338, 1514, 2247, 2754, 3155, 3222 |
| HinP1I | GCGC | 6 cut(s) | 338, 1514, 2247, 2754, 3155, 3222 |
| HincII | GTYRAC | 4 cut(s) | 2136, 2972, 3033, 3259 |
| HindII | GTYRAC | 4 cut(s) | 2136, 2972, 3033, 3259 |
| HindIII | AAGCTT | 2 cut(s) | 322, 753 |
| HinfI | GANTC | 6 cut(s) | 32, 134, 574, 1196, 2531, 3115 |
| HpaI | GTTAAC | 2 cut(s) | 2136, 3259 |
| HpaII | CCGG | 4 cut(s) | 25, 89, 216, 2067 |
| HphI | GGTGA | 9 cut(s) | 321, 726, 807, 890, 1059, 1867, 2079, 3007, 3159 |
| Hpy99I | CGWCG | 3 cut(s) | 252, 310, 964 |
| HpyCH4IV | ACGT | 6 cut(s) | 268, 1096, 1356, 1490, 2810, 3005 |
| HpySE526I | ACGT | 6 cut(s) | 268, 1096, 1356, 1490, 2810, 3005 |
| Hsp92I | GRCGYC | 2 cut(s) | 250, 3222 |
| HspAI | GCGC | 6 cut(s) | 338, 1514, 2247, 2754, 3155, 3222 |
| KasI | GGCGCC | 1 cut(s) | 3221 |
| Kpn2I | TCCGGA | 1 cut(s) | 215 |
| KpnI | GGTACC | 4 cut(s) | 1533, 1604, 1868, 2358 |
| Ksp22I | TGATCA | 1 cut(s) | 2896 |
| KspAI | GTTAAC | 2 cut(s) | 2136, 3259 |
| MaeII | ACGT | 6 cut(s) | 268, 1096, 1356, 1490, 2810, 3005 |
| MaeIII | GTNAC | 9 cut(s) | 1044, 1163, 1180, 1739, 1765, 1855, 2255, 2296, 2849 |
| MbiI | CCGCTC | 1 cut(s) | 316 |
| MflI | RGATCY | 6 cut(s) | 61, 164, 293, 394, 587, 2063 |
| MhlI | GDGCHC | 7 cut(s) | 23, 125, 540, 1041, 1309, 2042, 2406 |
| MlsI | TGGCCA | 2 cut(s) | 1353, 3149 |
| MluNI | TGGCCA | 2 cut(s) | 1353, 3149 |
| Mly113I | GGCGCC | 1 cut(s) | 3222 |
| MlyI | GAGTC | 2 cut(s) | 128, 2525 |
| MmeI | TCCRAC | 4 cut(s) | 1701, 2721, 2765, 3129 |
| Mox20I | TGGCCA | 2 cut(s) | 1353, 3149 |
| Mph1103I | ATGCAT | 1 cut(s) | 2944 |
| MroI | TCCGGA | 1 cut(s) | 215 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2149, 2347 |
| MscI | TGGCCA | 2 cut(s) | 1353, 3149 |
| MseI | TTAA | 8 cut(s) | 809, 1128, 1233, 1347, 1466, 2135, 2165, 3258 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1122, 2861 |
| Msp20I | TGGCCA | 2 cut(s) | 1353, 3149 |
| MspA1I | CMGCKG | 1 cut(s) | 1406 |
| MspCI | CTTAAG | 1 cut(s) | 808 |
| MspI | CCGG | 4 cut(s) | 25, 89, 216, 2067 |
| MspR9I | CCNGG | 9 cut(s) | 25, 90, 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| Mva1269I | GAATGC | 1 cut(s) | 544 |
| MvaI | CCWGG | 7 cut(s) | 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| MvnI | CGCG | 1 cut(s) | 3155 |
| NarI | GGCGCC | 1 cut(s) | 3222 |
| NciI | CCSGG | 2 cut(s) | 25, 90 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 2 cut(s) | 1163, 1855 |
| NsiI | ATGCAT | 1 cut(s) | 2944 |
| NspI | RCATGY | 1 cut(s) | 945 |
| PagI | TCATGA | 2 cut(s) | 622, 1309 |
| PaqCI | CACCTGC | 1 cut(s) | 2557 |
| PciI | ACATGT | 1 cut(s) | 941 |
| PctI | GAATGC | 1 cut(s) | 544 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2149, 2347 |
| PfeI | GAWTC | 4 cut(s) | 32, 574, 1196, 3115 |
| Pfl23II | CGTACG | 1 cut(s) | 254 |
| PfoI | TCCNGGA | 2 cut(s) | 23, 400 |
| Ple19I | CGATCG | 1 cut(s) | 261 |
| PleI | GAGTC | 2 cut(s) | 128, 2525 |
| PluTI | GGCGCC | 1 cut(s) | 3225 |
| PmaCI | CACGTG | 1 cut(s) | 1357 |
| PmlI | CACGTG | 1 cut(s) | 1357 |
| PpsI | GAGTC | 2 cut(s) | 128, 2525 |
| Ppu21I | YACGTR | 2 cut(s) | 1097, 1357 |
| PpuMI | RGGWCCY | 1 cut(s) | 2190 |
| PscI | ACATGT | 1 cut(s) | 941 |
| PshBI | ATTAAT | 1 cut(s) | 1347 |
| Psp124BI | GAGCTC | 1 cut(s) | 540 |
| Psp5II | RGGWCCY | 1 cut(s) | 2190 |
| Psp6I | CCWGG | 7 cut(s) | 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| PspCI | CACGTG | 1 cut(s) | 1357 |
| PspFI | CCCAGC | 2 cut(s) | 2371, 3018 |
| PspGI | CCWGG | 7 cut(s) | 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| PspLI | CGTACG | 1 cut(s) | 254 |
| PspOMI | GGGCCC | 1 cut(s) | 2038 |
| PspPI | GGNCC | 5 cut(s) | 437, 1714, 2038, 2039, 2190 |
| PspPPI | RGGWCCY | 1 cut(s) | 2190 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 228, 260 |
| PstI | CTGCAG | 1 cut(s) | 1243 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1247, 1583, 2579, 2735 |
| PsuI | RGATCY | 6 cut(s) | 61, 164, 293, 394, 587, 2063 |
| PvuI | CGATCG | 1 cut(s) | 261 |
| PvuII | CAGCTG | 1 cut(s) | 1406 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1122, 2861 |
| SacI | GAGCTC | 1 cut(s) | 540 |
| SaqAI | TTAA | 8 cut(s) | 809, 1128, 1233, 1347, 1466, 2135, 2165, 3258 |
| Sau96I | GGNCC | 5 cut(s) | 437, 1714, 2038, 2039, 2190 |
| ScaI | AGTACT | 2 cut(s) | 433, 2461 |
| SchI | GAGTC | 2 cut(s) | 128, 2525 |
| ScrFI | CCNGG | 9 cut(s) | 25, 90, 402, 1362, 1518, 1950, 2081, 2313, 2417 |
| SduI | GDGCHC | 7 cut(s) | 23, 125, 540, 1041, 1309, 2042, 2406 |
| SfcI | CTRYAG | 4 cut(s) | 333, 1239, 1425, 2874 |
| SfoI | GGCGCC | 1 cut(s) | 3223 |
| SinI | GGWCC | 2 cut(s) | 437, 2190 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1122, 2861 |
| SmlI | CTYRAG | 4 cut(s) | 479, 808, 1668, 2620 |
| SmoI | CTYRAG | 4 cut(s) | 479, 808, 1668, 2620 |
| SpeI | ACTAGT | 1 cut(s) | 1757 |
| SspDI | GGCGCC | 1 cut(s) | 3221 |
| SstI | GAGCTC | 1 cut(s) | 540 |
| StyD4I | CCNGG | 9 cut(s) | 23, 88, 400, 1360, 1516, 1948, 2079, 2311, 2415 |
| StyI | CCWWGG | 2 cut(s) | 1881, 2154 |
| TaiI | ACGT | 6 cut(s) | 271, 1099, 1359, 1493, 2813, 3008 |
| TaqI | TCGA | 4 cut(s) | 308, 526, 1002, 1296 |
| TatI | WGTACW | 5 cut(s) | 431, 704, 1175, 1384, 2459 |
| TauI | GCSGC | 7 cut(s) | 209, 290, 681, 980, 1938, 2389, 2831 |
| TfiI | GAWTC | 4 cut(s) | 32, 574, 1196, 3115 |
| Tru1I | TTAA | 8 cut(s) | 809, 1128, 1233, 1347, 1466, 2135, 2165, 3258 |
| Tru9I | TTAA | 8 cut(s) | 809, 1128, 1233, 1347, 1466, 2135, 2165, 3258 |
| TseFI | GTSAC | 2 cut(s) | 1163, 1855 |
| Tsp45I | GTSAC | 2 cut(s) | 1163, 1855 |
| TspDTI | ATGAA | 8 cut(s) | 93, 1203, 1259, 1356, 1443, 2586, 2595, 2927 |
| TspGWI | ACGGA | 4 cut(s) | 133, 842, 948, 2871 |
| Vha464I | CTTAAG | 1 cut(s) | 808 |
| VneI | GTGCAC | 1 cut(s) | 2402 |
| VpaK11BI | GGWCC | 2 cut(s) | 437, 2190 |
| VspI | ATTAAT | 1 cut(s) | 1347 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 389 |
| XapI | RAATTY | 6 cut(s) | 486, 771, 1608, 1873, 2159, 2513 |
| XbaI | TCTAGA | 3 cut(s) | 167, 577, 800 |
| XceI | RCATGY | 1 cut(s) | 945 |
| XmiI | GTMKAC | 1 cut(s) | 2529 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2149, 2347 |
| ZrmI | AGTACT | 2 cut(s) | 433, 2461 |
| Zsp2I | ATGCAT | 1 cut(s) | 2944 |