Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10650 AT3G10650 |
| fragaria_vesca | FvH4_7g05430 FvH4_7g05440 FvH4_7g05440 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 |
| malus_domestica | MD02G1257800.v1.1 MD07G1063100.v1.1 |
| prunus_persica | Prupe.2G074800_v2.0.a1 |
| pyrus_communis | pycom02g21880 pycom07g04820 |
| rosa_chinensis | RchiOBHm_Chr1g0332241 |
| rosa_laevigata | RLG00000029683 |
| rosa_multiflora | Rmu_co8444859.1_g000001 Rmu_sc0016174.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00318320 |
| rosa_rugosa | Rorug01G0099200 |
| rosa_samantha | Rh1AG123000 Rh1BG094100 Rh1CG117600 Rh1DG128400 |
| rosa_wichuraiana | Rw1G010030 Rw1G010040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 670, 2221, 3742 |
| AatII | GACGTC | 1 cut(s) | 2963 |
| Acc36I | ACCTGC | 3 cut(s) | 670, 2221, 3742 |
| AccB1I | GGYRCC | 4 cut(s) | 520, 1916, 2246, 2444 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3710 |
| AccBSI | CCGCTC | 1 cut(s) | 56 |
| AccI | GTMKAC | 3 cut(s) | 772, 1143, 3609 |
| AccII | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| AclWI | GGATC | 9 cut(s) | 173, 299, 1024, 1078, 3016, 3360, 3373, 3472, 3733 |
| AcoI | YGGCCR | 2 cut(s) | 9, 116 |
| AcsI | RAATTY | 8 cut(s) | 408, 560, 1092, 1335, 1487, 2311, 2530, 2812 |
| AcuI | CTGAAG | 2 cut(s) | 2493, 3642 |
| AcyI | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 269, 2219, 2915, 2980, 3065, 3545, 3662, 3680, 3710 |
| AjiI | CACGTC | 1 cut(s) | 126 |
| AjnI | CCWGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1411, 1443 |
| Alw21I | GWGCWC | 6 cut(s) | 402, 672, 1136, 1627, 1774, 2276 |
| Alw26I | GTCTC | 7 cut(s) | 1366, 1379, 1560, 1814, 2164, 2374, 3234 |
| Alw44I | GTGCAC | 1 cut(s) | 1770 |
| AlwI | GGATC | 9 cut(s) | 173, 299, 1024, 1078, 3016, 3360, 3373, 3472, 3733 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1456, 3710 |
| Ama87I | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| AoxI | GGCC | 4 cut(s) | 9, 116, 695, 1606 |
| ApaLI | GTGCAC | 1 cut(s) | 1770 |
| ApoI | RAATTY | 8 cut(s) | 408, 560, 1092, 1335, 1487, 2311, 2530, 2812 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 82, 114, 2843, 2875, 3692, 3724 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1180, 3755 |
| AspLEI | GCGC | 7 cut(s) | 16, 209, 2591, 2758, 3398, 3479, 3863 |
| AspS9I | GGNCC | 7 cut(s) | 90, 362, 948, 1079, 1607, 2081, 3318 |
| AsuII | TTCGAA | 1 cut(s) | 85 |
| AsuNHI | GCTAGC | 2 cut(s) | 2585, 2749 |
| AvaI | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| AvaII | GGWCC | 6 cut(s) | 90, 362, 948, 1079, 2081, 3318 |
| BaeGI | GKGCMC | 1 cut(s) | 1774 |
| BamHI | GGATCC | 1 cut(s) | 3365 |
| BanI | GGYRCC | 4 cut(s) | 520, 1916, 2246, 2444 |
| BanII | GRGCYC | 6 cut(s) | 402, 672, 838, 1136, 1627, 2276 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2098, 2130 |
| BbsI | GAAGAC | 5 cut(s) | 80, 972, 2856, 3141, 3630 |
| Bbv12I | GWGCWC | 6 cut(s) | 402, 672, 1136, 1627, 1774, 2276 |
| BceAI | ACGGC | 2 cut(s) | 64, 588 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3387, 3421 |
| BciT130I | CCWGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| BciVI | GTATCC | 2 cut(s) | 330, 718 |
| BclI | TGATCA | 2 cut(s) | 349, 3592 |
| BcoDI | GTCTC | 7 cut(s) | 1366, 1379, 1560, 1814, 2164, 2374, 3234 |
| BfoI | RGCGCY | 2 cut(s) | 210, 3864 |
| BfuAI | ACCTGC | 3 cut(s) | 670, 2221, 3742 |
| BfuI | GTATCC | 2 cut(s) | 330, 718 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3446 |
| BglII | AGATCT | 2 cut(s) | 434, 875 |
| BlpI | GCTNAGC | 2 cut(s) | 186, 2629 |
| BmcAI | AGTACT | 5 cut(s) | 370, 3082, 3136, 3187, 3523 |
| Bme1390I | CCNGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| Bme18I | GGWCC | 6 cut(s) | 90, 362, 948, 1079, 2081, 3318 |
| BmeT110I | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| BmgBI | CACGTC | 1 cut(s) | 126 |
| BmgT120I | GGNCC | 7 cut(s) | 90, 362, 948, 1079, 1607, 2081, 3318 |
| BmrFI | CCNGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| BmrI | ACTGGG | 2 cut(s) | 2801, 3650 |
| BmtI | GCTAGC | 2 cut(s) | 2589, 2753 |
| BmuI | ACTGGG | 2 cut(s) | 2801, 3650 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3145 |
| BpiI | GAAGAC | 5 cut(s) | 80, 972, 2856, 3141, 3630 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1811, 1843 |
| BpmI | CTGGAG | 8 cut(s) | 309, 558, 1361, 1487, 1863, 1889, 2385, 3160 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1242 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 186, 2629 |
| Bpu14I | TTCGAA | 1 cut(s) | 85 |
| BpuEI | CTTGAG | 4 cut(s) | 822, 1150, 1808, 2260 |
| Bsa29I | ATCGAT | 2 cut(s) | 448, 1546 |
| BsaAI | YACGTR | 1 cut(s) | 1445 |
| BsaHI | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| BsaI | GGTCTC | 2 cut(s) | 1366, 1379 |
| BsaJI | CCNNGG | 5 cut(s) | 812, 2979, 2980, 3285, 3579 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3091, 3121 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 269, 2219, 2915, 2980, 3065, 3545, 3662, 3680, 3710 |
| Bse3DI | GCAATG | 3 cut(s) | 832, 2580, 2623 |
| BseBI | CCWGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| BseCI | ATCGAT | 2 cut(s) | 448, 1546 |
| BseDI | CCNNGG | 5 cut(s) | 812, 2979, 2980, 3285, 3579 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 269, 2219, 2915, 2980, 3065, 3545, 3662, 3680, 3710 |
| BseMI | GCAATG | 3 cut(s) | 832, 2580, 2623 |
| BseSI | GKGCMC | 1 cut(s) | 1774 |
| BseX3I | CGGCCG | 2 cut(s) | 9, 116 |
| BseYI | CCCAGC | 6 cut(s) | 944, 1968, 2028, 2635, 3024, 3263 |
| BsgI | GTGCAG | 1 cut(s) | 3282 |
| Bsh1236I | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| Bsh1285I | CGRYCG | 3 cut(s) | 12, 115, 119 |
| BshFI | GGCC | 4 cut(s) | 11, 118, 697, 1608 |
| BshNI | GGYRCC | 4 cut(s) | 520, 1916, 2246, 2444 |
| BshVI | ATCGAT | 2 cut(s) | 448, 1546 |
| BsiEI | CGRYCG | 3 cut(s) | 12, 115, 119 |
| BsiHKAI | GWGCWC | 6 cut(s) | 402, 672, 1136, 1627, 1774, 2276 |
| BsiHKCI | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| BsiSI | CCGG | 1 cut(s) | 182 |
| BslFI | GGGAC | 7 cut(s) | 1183, 1283, 2243, 2789, 2962, 3638, 3725 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 269, 2219, 2915, 2980, 3065, 3545, 3662, 3680, 3710 |
| BsmAI | GTCTC | 7 cut(s) | 1366, 1379, 1560, 1814, 2164, 2374, 3234 |
| BsmFI | GGGAC | 7 cut(s) | 1183, 1283, 2243, 2789, 2962, 3638, 3725 |
| BsmI | GAATGC | 2 cut(s) | 466, 1757 |
| BsnI | GGCC | 4 cut(s) | 11, 118, 697, 1608 |
| Bso31I | GGTCTC | 2 cut(s) | 1366, 1379 |
| BsoBI | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| Bsp119I | TTCGAA | 1 cut(s) | 85 |
| Bsp1286I | GDGCHC | 7 cut(s) | 402, 672, 838, 1136, 1627, 1774, 2276 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 186, 2629 |
| Bsp19I | CCATGG | 1 cut(s) | 812 |
| Bsp68I | TCGCGA | 1 cut(s) | 868 |
| BspANI | GGCC | 4 cut(s) | 11, 118, 697, 1608 |
| BspDI | ATCGAT | 2 cut(s) | 448, 1546 |
| BspFNI | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| BspHI | TCATGA | 3 cut(s) | 280, 544, 643 |
| BspMAI | CTGCAG | 7 cut(s) | 667, 1711, 2218, 2698, 3424, 3517, 3739 |
| BspMI | ACCTGC | 3 cut(s) | 670, 2221, 3742 |
| BspOI | GCTAGC | 2 cut(s) | 2589, 2753 |
| BspPI | GGATC | 9 cut(s) | 173, 299, 1024, 1078, 3016, 3360, 3373, 3472, 3733 |
| BspQI | GCTCTTC | 1 cut(s) | 1832 |
| BspT104I | TTCGAA | 1 cut(s) | 85 |
| BspT107I | GGYRCC | 4 cut(s) | 520, 1916, 2246, 2444 |
| BspTNI | GGTCTC | 2 cut(s) | 1366, 1379 |
| BsrBI | CCGCTC | 1 cut(s) | 56 |
| BsrDI | GCAATG | 3 cut(s) | 832, 2580, 2623 |
| BssECI | CCNNGG | 5 cut(s) | 812, 2979, 2980, 3285, 3579 |
| BssNAI | GTATAC | 1 cut(s) | 1144 |
| BssNI | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| BssT1I | CCWWGG | 2 cut(s) | 812, 3285 |
| Bst1107I | GTATAC | 1 cut(s) | 1144 |
| Bst2UI | CCWGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| Bst6I | CTCTTC | 3 cut(s) | 15, 1303, 1832 |
| BstACI | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| BstBAI | YACGTR | 1 cut(s) | 1445 |
| BstBI | TTCGAA | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 8 cut(s) | 36, 161, 672, 1905, 2587, 2751, 3001, 3540 |
| BstDSI | CCRYGG | 1 cut(s) | 812 |
| BstEII | GGTNACC | 1 cut(s) | 2599 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 267 |
| BstFNI | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| BstH2I | RGCGCY | 2 cut(s) | 210, 3864 |
| BstHHI | GCGC | 7 cut(s) | 16, 209, 2591, 2758, 3398, 3479, 3863 |
| BstMAI | GTCTC | 7 cut(s) | 1366, 1379, 1560, 1814, 2164, 2374, 3234 |
| BstMCI | CGRYCG | 3 cut(s) | 12, 115, 119 |
| BstNI | CCWGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3145 |
| BstPI | GGTNACC | 1 cut(s) | 2599 |
| BstSCI | CCNGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| BstSLI | GKGCMC | 1 cut(s) | 1774 |
| BstUI | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| BstV2I | GAAGAC | 5 cut(s) | 80, 972, 2856, 3141, 3630 |
| BstX2I | RGATCY | 7 cut(s) | 434, 875, 1016, 1070, 3008, 3365, 3725 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1013, 1324, 1339, 3032 |
| BstYI | RGATCY | 7 cut(s) | 434, 875, 1016, 1070, 3008, 3365, 3725 |
| BstZ17I | GTATAC | 1 cut(s) | 1144 |
| BstZI | CGGCCG | 2 cut(s) | 9, 116 |
| Bsu15I | ATCGAT | 2 cut(s) | 448, 1546 |
| BsuI | GTATCC | 2 cut(s) | 330, 718 |
| BsuRI | GGCC | 4 cut(s) | 11, 118, 697, 1608 |
| BsuTUI | ATCGAT | 2 cut(s) | 448, 1546 |
| BtgI | CCRYGG | 1 cut(s) | 812 |
| BtrI | CACGTC | 1 cut(s) | 126 |
| BtsI | GCAGTG | 6 cut(s) | 128, 144, 2287, 2553, 2778, 3010 |
| BtuMI | TCGCGA | 1 cut(s) | 868 |
| BveI | ACCTGC | 3 cut(s) | 670, 2221, 3742 |
| Cac8I | GCNNGC | 8 cut(s) | 36, 161, 672, 1905, 2587, 2751, 3001, 3540 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1456, 3710 |
| CciI | TCATGA | 3 cut(s) | 280, 544, 643 |
| CciNI | GCGGCCGC | 1 cut(s) | 9 |
| CfoI | GCGC | 7 cut(s) | 16, 209, 2591, 2758, 3398, 3479, 3863 |
| Cfr13I | GGNCC | 7 cut(s) | 90, 362, 948, 1079, 1607, 2081, 3318 |
| ClaI | ATCGAT | 2 cut(s) | 448, 1546 |
| CseI | GACGC | 3 cut(s) | 85, 112, 963 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 516, 551, 1212, 1247 |
| EaeI | YGGCCR | 2 cut(s) | 9, 116 |
| EagI | CGGCCG | 2 cut(s) | 9, 116 |
| Eam1104I | CTCTTC | 3 cut(s) | 15, 1303, 1832 |
| EarI | CTCTTC | 3 cut(s) | 15, 1303, 1832 |
| Ecl136II | GAGCTC | 5 cut(s) | 400, 670, 1134, 1625, 2274 |
| EclXI | CGGCCG | 2 cut(s) | 9, 116 |
| Eco130I | CCWWGG | 2 cut(s) | 812, 3285 |
| Eco147I | AGGCCT | 1 cut(s) | 697 |
| Eco24I | GRGCYC | 6 cut(s) | 402, 672, 838, 1136, 1627, 2276 |
| Eco31I | GGTCTC | 2 cut(s) | 1366, 1379 |
| Eco32I | GATATC | 1 cut(s) | 2382 |
| Eco47I | GGWCC | 6 cut(s) | 90, 362, 948, 1079, 2081, 3318 |
| Eco52I | CGGCCG | 2 cut(s) | 9, 116 |
| Eco53kI | GAGCTC | 5 cut(s) | 400, 670, 1134, 1625, 2274 |
| Eco57I | CTGAAG | 2 cut(s) | 2493, 3642 |
| Eco88I | CYCGRG | 3 cut(s) | 912, 1563, 3580 |
| Eco91I | GGTNACC | 1 cut(s) | 2599 |
| EcoICRI | GAGCTC | 5 cut(s) | 400, 670, 1134, 1625, 2274 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 267 |
| EcoO109I | RGGNCCY | 2 cut(s) | 90, 3318 |
| EcoO65I | GGTNACC | 1 cut(s) | 2599 |
| EcoRI | GAATTC | 1 cut(s) | 1092 |
| EcoRII | CCWGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| EcoRV | GATATC | 1 cut(s) | 2382 |
| EcoT14I | CCWWGG | 2 cut(s) | 812, 3285 |
| EcoT38I | GRGCYC | 6 cut(s) | 402, 672, 838, 1136, 1627, 2276 |
| ErhI | CCWWGG | 2 cut(s) | 812, 3285 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 994, 1026, 1282, 1314 |
| FaqI | GGGAC | 7 cut(s) | 1183, 1283, 2243, 2789, 2962, 3638, 3725 |
| FauI | CCCGC | 3 cut(s) | 9, 49, 1160 |
| FauNDI | CATATG | 1 cut(s) | 2044 |
| FbaI | TGATCA | 2 cut(s) | 349, 3592 |
| FblI | GTMKAC | 3 cut(s) | 772, 1143, 3609 |
| FriOI | GRGCYC | 6 cut(s) | 402, 672, 838, 1136, 1627, 2276 |
| GlaI | GCGC | 7 cut(s) | 15, 208, 2590, 2757, 3397, 3478, 3862 |
| GsaI | CCCAGC | 6 cut(s) | 948, 1972, 2032, 2639, 3028, 3267 |
| GsuI | CTGGAG | 8 cut(s) | 309, 558, 1361, 1487, 1863, 1889, 2385, 3160 |
| HaeII | RGCGCY | 2 cut(s) | 210, 3864 |
| HaeIII | GGCC | 4 cut(s) | 11, 118, 697, 1608 |
| HapII | CCGG | 1 cut(s) | 182 |
| HgaI | GACGC | 3 cut(s) | 85, 112, 963 |
| HhaI | GCGC | 7 cut(s) | 16, 209, 2591, 2758, 3398, 3479, 3863 |
| Hin1I | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| Hin6I | GCGC | 7 cut(s) | 14, 207, 2589, 2756, 3396, 3477, 3861 |
| HinP1I | GCGC | 7 cut(s) | 14, 207, 2589, 2756, 3396, 3477, 3861 |
| HincII | GTYRAC | 4 cut(s) | 2173, 2233, 2481, 3686 |
| HindII | GTYRAC | 4 cut(s) | 2173, 2233, 2481, 3686 |
| HindIII | AAGCTT | 1 cut(s) | 1424 |
| HpaII | CCGG | 1 cut(s) | 182 |
| Hpy99I | CGWCG | 4 cut(s) | 106, 179, 979, 2962 |
| HpyCH4IV | ACGT | 4 cut(s) | 125, 1444, 2235, 2960 |
| HpySE526I | ACGT | 4 cut(s) | 125, 1444, 2235, 2960 |
| Hsp92I | GRCGYC | 4 cut(s) | 77, 104, 974, 2960 |
| HspAI | GCGC | 7 cut(s) | 14, 207, 2589, 2756, 3396, 3477, 3861 |
| Ksp22I | TGATCA | 2 cut(s) | 349, 3592 |
| LguI | GCTCTTC | 1 cut(s) | 1832 |
| MaeII | ACGT | 4 cut(s) | 125, 1444, 2235, 2960 |
| MbiI | CCGCTC | 1 cut(s) | 56 |
| MfeI | CAATTG | 2 cut(s) | 489, 2787 |
| MflI | RGATCY | 7 cut(s) | 434, 875, 1016, 1070, 3008, 3365, 3725 |
| MhlI | GDGCHC | 7 cut(s) | 402, 672, 838, 1136, 1627, 1774, 2276 |
| MlyI | GAGTC | 3 cut(s) | 2376, 2819, 3716 |
| MmeI | TCCRAC | 2 cut(s) | 492, 2004 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1180, 3755 |
| MseI | TTAA | 6 cut(s) | 567, 1034, 1701, 2094, 2151, 3900 |
| MslI | CAYNNNNRTG | 1 cut(s) | 648 |
| MspA1I | CMGCKG | 4 cut(s) | 190, 3050, 3263, 3916 |
| MspI | CCGG | 1 cut(s) | 182 |
| MspR9I | CCNGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| MunI | CAATTG | 2 cut(s) | 489, 2787 |
| Mva1269I | GAATGC | 2 cut(s) | 466, 1757 |
| MvaI | CCWGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| MvnI | CGCG | 4 cut(s) | 14, 16, 868, 1167 |
| NcoI | CCATGG | 1 cut(s) | 812 |
| NdeI | CATATG | 1 cut(s) | 2044 |
| NheI | GCTAGC | 2 cut(s) | 2585, 2749 |
| NmuCI | GTSAC | 7 cut(s) | 126, 801, 853, 1631, 2208, 2599, 3869 |
| NotI | GCGGCCGC | 1 cut(s) | 9 |
| NruI | TCGCGA | 1 cut(s) | 868 |
| NspV | TTCGAA | 1 cut(s) | 85 |
| PaeR7I | CTCGAG | 2 cut(s) | 912, 1563 |
| PagI | TCATGA | 3 cut(s) | 280, 544, 643 |
| PaqCI | CACCTGC | 3 cut(s) | 670, 2221, 3742 |
| PasI | CCCWGGG | 1 cut(s) | 2980 |
| PceI | AGGCCT | 1 cut(s) | 697 |
| PciSI | GCTCTTC | 1 cut(s) | 1832 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1093 |
| PctI | GAATGC | 2 cut(s) | 466, 1757 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1180, 3755 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3710 |
| PfoI | TCCNGGA | 1 cut(s) | 325 |
| Ple19I | CGATCG | 1 cut(s) | 115 |
| PleI | GAGTC | 3 cut(s) | 2375, 2819, 3715 |
| PpsI | GAGTC | 3 cut(s) | 2375, 2819, 3715 |
| Ppu21I | YACGTR | 1 cut(s) | 1445 |
| PpuMI | RGGWCCY | 2 cut(s) | 90, 3318 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3145 |
| Psp124BI | GAGCTC | 5 cut(s) | 402, 672, 1136, 1627, 2276 |
| Psp5II | RGGWCCY | 2 cut(s) | 90, 3318 |
| Psp6I | CCWGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| PspEI | GGTNACC | 1 cut(s) | 2599 |
| PspFI | CCCAGC | 6 cut(s) | 944, 1968, 2028, 2635, 3024, 3263 |
| PspGI | CCWGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| PspPI | GGNCC | 7 cut(s) | 90, 362, 948, 1079, 1607, 2081, 3318 |
| PspPPI | RGGWCCY | 2 cut(s) | 90, 3318 |
| PstI | CTGCAG | 7 cut(s) | 667, 1711, 2218, 2698, 3424, 3517, 3739 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1456, 3710 |
| PsuI | RGATCY | 7 cut(s) | 434, 875, 1016, 1070, 3008, 3365, 3725 |
| PvuI | CGATCG | 1 cut(s) | 115 |
| PvuII | CAGCTG | 2 cut(s) | 3050, 3263 |
| RruI | TCGCGA | 1 cut(s) | 868 |
| RseI | CAYNNNNRTG | 1 cut(s) | 648 |
| SacI | GAGCTC | 5 cut(s) | 402, 672, 1136, 1627, 2276 |
| SapI | GCTCTTC | 1 cut(s) | 1832 |
| SaqAI | TTAA | 6 cut(s) | 567, 1034, 1701, 2094, 2151, 3900 |
| Sau96I | GGNCC | 7 cut(s) | 90, 362, 948, 1079, 1607, 2081, 3318 |
| ScaI | AGTACT | 5 cut(s) | 370, 3082, 3136, 3187, 3523 |
| SchI | GAGTC | 3 cut(s) | 2376, 2819, 3716 |
| ScrFI | CCNGG | 4 cut(s) | 327, 1466, 2981, 3195 |
| SduI | GDGCHC | 7 cut(s) | 402, 672, 838, 1136, 1627, 1774, 2276 |
| Sfr274I | CTCGAG | 2 cut(s) | 912, 1563 |
| SfuI | TTCGAA | 1 cut(s) | 85 |
| SinI | GGWCC | 6 cut(s) | 90, 362, 948, 1079, 2081, 3318 |
| SlaI | CTCGAG | 2 cut(s) | 912, 1563 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 648 |
| SmlI | CTYRAG | 6 cut(s) | 837, 912, 1129, 1563, 1787, 2275 |
| SmoI | CTYRAG | 6 cut(s) | 837, 912, 1129, 1563, 1787, 2275 |
| SseBI | AGGCCT | 1 cut(s) | 697 |
| SstI | GAGCTC | 5 cut(s) | 402, 672, 1136, 1627, 2276 |
| StuI | AGGCCT | 1 cut(s) | 697 |
| StyD4I | CCNGG | 4 cut(s) | 325, 1464, 2979, 3193 |
| StyI | CCWWGG | 2 cut(s) | 812, 3285 |
| TaiI | ACGT | 4 cut(s) | 128, 1447, 2238, 2963 |
| TaqII | GACCGA | 1 cut(s) | 3653 |
| TatI | WGTACW | 7 cut(s) | 368, 1286, 2317, 3080, 3134, 3185, 3521 |
| TauI | GCSGC | 5 cut(s) | 8, 11, 14, 121, 193 |
| Tru1I | TTAA | 6 cut(s) | 567, 1034, 1701, 2094, 2151, 3900 |
| Tru9I | TTAA | 6 cut(s) | 567, 1034, 1701, 2094, 2151, 3900 |
| TseFI | GTSAC | 7 cut(s) | 126, 801, 853, 1631, 2208, 2599, 3869 |
| Tsp45I | GTSAC | 7 cut(s) | 126, 801, 853, 1631, 2208, 2599, 3869 |
| TspGWI | ACGGA | 1 cut(s) | 217 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3710 |
| VneI | GTGCAC | 1 cut(s) | 1770 |
| VpaK11BI | GGWCC | 6 cut(s) | 90, 362, 948, 1079, 2081, 3318 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 267 |
| XapI | RAATTY | 8 cut(s) | 408, 560, 1092, 1335, 1487, 2311, 2530, 2812 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1212 |
| XhoI | CTCGAG | 2 cut(s) | 912, 1563 |
| XmiI | GTMKAC | 3 cut(s) | 772, 1143, 3609 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1180, 3755 |
| ZraI | GACGTC | 1 cut(s) | 2961 |
| ZrmI | AGTACT | 5 cut(s) | 370, 3082, 3136, 3187, 3523 |