Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10650 AT3G10650 |
| fragaria_vesca | FvH4_7g05430 FvH4_7g05440 FvH4_7g05440 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 FvH4_7g05480 |
| malus_domestica | MD02G1257800.v1.1 MD07G1063100.v1.1 |
| prunus_persica | Prupe.2G074800_v2.0.a1 |
| pyrus_communis | pycom02g21880 pycom07g04820 |
| rosa_chinensis | RchiOBHm_Chr1g0332241 |
| rosa_laevigata | RLG00000029683 |
| rosa_multiflora | Rmu_co8444859.1_g000001 Rmu_sc0016174.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00318320 |
| rosa_rugosa | Rorug01G0099200 |
| rosa_samantha | Rh1AG123000 Rh1BG094100 Rh1CG117600 Rh1DG128400 |
| rosa_wichuraiana | Rw1G010030 Rw1G010040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1449 |
| AarI | CACCTGC | 1 cut(s) | 3013 |
| Acc36I | ACCTGC | 4 cut(s) | 1642, 2962, 3013, 3304 |
| Acc65I | GGTACC | 4 cut(s) | 1922, 1993, 2248, 2738 |
| AccB1I | GGYRCC | 7 cut(s) | 311, 799, 1922, 1993, 2248, 2738, 3677 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 809 |
| AccBSI | CCGCTC | 1 cut(s) | 164 |
| AccI | GTMKAC | 3 cut(s) | 697, 914, 2985 |
| AccII | CGCG | 2 cut(s) | 16, 3611 |
| AccIII | TCCGGA | 1 cut(s) | 63 |
| AclWI | GGATC | 8 cut(s) | 149, 152, 284, 978, 991, 1045, 2442, 2455 |
| AcoI | YGGCCR | 4 cut(s) | 110, 1685, 1747, 3603 |
| AcsI | RAATTY | 8 cut(s) | 381, 1059, 1427, 2001, 2213, 2257, 2543, 2969 |
| AcuI | CTGAAG | 3 cut(s) | 507, 1854, 1998 |
| AcvI | CACGTG | 1 cut(s) | 1753 |
| AcyI | GRCGYC | 2 cut(s) | 98, 3678 |
| AdeI | CACNNNGTG | 1 cut(s) | 2786 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 49, 809, 993, 1149, 1990, 2757, 2894, 3302, 3632 |
| AflII | CTTAAG | 1 cut(s) | 1096 |
| AflIII | ACRYGT | 1 cut(s) | 1229 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 664 |
| AhlI | ACTAGT | 1 cut(s) | 2141 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2894, 2926 |
| Alw21I | GWGCWC | 5 cut(s) | 435, 937, 1705, 2791, 2867 |
| Alw26I | GTCTC | 5 cut(s) | 348, 1203, 2227, 2274, 3442 |
| Alw44I | GTGCAC | 2 cut(s) | 933, 2787 |
| AlwI | GGATC | 8 cut(s) | 149, 152, 284, 978, 991, 1045, 2442, 2455 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1396, 1643, 1976, 3035, 3191 |
| Ama87I | CYCGRG | 1 cut(s) | 876 |
| Aor13HI | TCCGGA | 1 cut(s) | 63 |
| AoxI | GGCC | 8 cut(s) | 110, 996, 1151, 1685, 1747, 2097, 2422, 3603 |
| ApaI | GGGCCC | 1 cut(s) | 2426 |
| ApaLI | GTGCAC | 2 cut(s) | 933, 2787 |
| ApoI | RAATTY | 8 cut(s) | 381, 1059, 1427, 2001, 2213, 2257, 2543, 2969 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 316, 348 |
| AseI | ATTAAT | 1 cut(s) | 1743 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2533, 2731 |
| Asp718I | GGTACC | 4 cut(s) | 1922, 1993, 2248, 2738 |
| AspLEI | GCGC | 7 cut(s) | 16, 188, 1909, 2633, 3212, 3613, 3680 |
| AspS9I | GGNCC | 7 cut(s) | 332, 996, 1046, 2098, 2422, 2423, 2574 |
| AsuHPI | GGTGA | 9 cut(s) | 169, 621, 1095, 1178, 1347, 2251, 2463, 3463, 3615 |
| AvaI | CYCGRG | 1 cut(s) | 876 |
| AvaII | GGWCC | 3 cut(s) | 332, 1046, 2574 |
| AxyI | CCTNAGG | 1 cut(s) | 44 |
| BaeGI | GKGCMC | 3 cut(s) | 937, 2426, 2791 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2232, 2265 |
| BalI | TGGCCA | 2 cut(s) | 1749, 3605 |
| BamHI | GGATCC | 2 cut(s) | 983, 2447 |
| BanI | GGYRCC | 7 cut(s) | 311, 799, 1922, 1993, 2248, 2738, 3677 |
| BanII | GRGCYC | 4 cut(s) | 435, 1329, 2426, 2867 |
| BbrPI | CACGTG | 1 cut(s) | 1753 |
| BbsI | GAAGAC | 4 cut(s) | 74, 202, 660, 3375 |
| Bbv12I | GWGCWC | 5 cut(s) | 435, 937, 1705, 2791, 2867 |
| BbvCI | CCTCAGC | 1 cut(s) | 3381 |
| BccI | CCATC | 9 cut(s) | 691, 946, 1141, 1546, 1766, 1855, 1883, 2194, 2291 |
| BceAI | ACGGC | 5 cut(s) | 24, 85, 148, 1672, 1700 |
| BciVI | GTATCC | 1 cut(s) | 688 |
| BclI | TGATCA | 1 cut(s) | 3352 |
| BcoDI | GTCTC | 5 cut(s) | 348, 1203, 2227, 2274, 3442 |
| BcuI | ACTAGT | 1 cut(s) | 2141 |
| BfmI | CTRYAG | 5 cut(s) | 181, 915, 1635, 1821, 3330 |
| BfoI | RGCGCY | 2 cut(s) | 189, 3681 |
| BfrI | CTTAAG | 1 cut(s) | 1096 |
| BfuAI | ACCTGC | 4 cut(s) | 1642, 2962, 3013, 3304 |
| BfuI | GTATCC | 1 cut(s) | 688 |
| BglII | AGATCT | 3 cut(s) | 482, 827, 839 |
| BmcAI | AGTACT | 2 cut(s) | 328, 2917 |
| Bme18I | GGWCC | 3 cut(s) | 332, 1046, 2574 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 664 |
| BmeT110I | CYCGRG | 1 cut(s) | 876 |
| BmgT120I | GGNCC | 7 cut(s) | 332, 996, 1046, 2098, 2422, 2423, 2574 |
| BmrI | ACTGGG | 3 cut(s) | 801, 2168, 3683 |
| BmuI | ACTGGG | 3 cut(s) | 801, 2168, 3683 |
| BpiI | GAAGAC | 4 cut(s) | 74, 202, 660, 3375 |
| BpmI | CTGGAG | 7 cut(s) | 318, 372, 1427, 1736, 1832, 2896, 2916 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3381 |
| BpuEI | CTTGAG | 4 cut(s) | 395, 816, 2037, 3061 |
| Bsa29I | ATCGAT | 1 cut(s) | 421 |
| BsaAI | YACGTR | 3 cut(s) | 701, 1385, 1753 |
| BsaHI | GRCGYC | 2 cut(s) | 98, 3678 |
| BsaJI | CCNNGG | 3 cut(s) | 2265, 2538, 3108 |
| BsaWI | WCCGGW | 2 cut(s) | 63, 2450 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2894, 2924 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 49, 809, 993, 1149, 1990, 2757, 2894, 3302, 3632 |
| Bse21I | CCTNAGG | 1 cut(s) | 44 |
| Bse3DI | GCAATG | 2 cut(s) | 686, 2130 |
| BseAI | TCCGGA | 1 cut(s) | 63 |
| BseCI | ATCGAT | 1 cut(s) | 421 |
| BseDI | CCNNGG | 3 cut(s) | 2265, 2538, 3108 |
| BseGI | GGATG | 8 cut(s) | 938, 1417, 1474, 1666, 1729, 2186, 3071, 3179 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 49, 809, 993, 1149, 1990, 2757, 2894, 3302, 3632 |
| BseMI | GCAATG | 2 cut(s) | 686, 2130 |
| BseMII | CTCAG | 9 cut(s) | 179, 252, 456, 1029, 1314, 2101, 2887, 3372, 3453 |
| BseRI | GAGGAG | 1 cut(s) | 3435 |
| BseSI | GKGCMC | 3 cut(s) | 937, 2426, 2791 |
| BseX3I | CGGCCG | 1 cut(s) | 1685 |
| BseYI | CCCAGC | 3 cut(s) | 691, 2756, 3474 |
| BsgI | GTGCAG | 3 cut(s) | 2373, 2853, 3123 |
| Bsh1236I | CGCG | 2 cut(s) | 16, 3611 |
| Bsh1285I | CGRYCG | 2 cut(s) | 109, 1688 |
| BshFI | GGCC | 8 cut(s) | 112, 998, 1153, 1687, 1749, 2099, 2424, 3605 |
| BshNI | GGYRCC | 7 cut(s) | 311, 799, 1922, 1993, 2248, 2738, 3677 |
| BshVI | ATCGAT | 1 cut(s) | 421 |
| BsiEI | CGRYCG | 2 cut(s) | 109, 1688 |
| BsiHKAI | GWGCWC | 5 cut(s) | 435, 937, 1705, 2791, 2867 |
| BsiHKCI | CYCGRG | 1 cut(s) | 876 |
| BsiSI | CCGG | 2 cut(s) | 64, 2451 |
| BsiWI | CGTACG | 2 cut(s) | 102, 863 |
| BslFI | GGGAC | 5 cut(s) | 318, 593, 1967, 2734, 2773 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 49, 809, 993, 1149, 1990, 2757, 2894, 3302, 3632 |
| BsmAI | GTCTC | 5 cut(s) | 348, 1203, 2227, 2274, 3442 |
| BsmBI | CGTCTC | 1 cut(s) | 348 |
| BsmFI | GGGAC | 5 cut(s) | 318, 593, 1967, 2734, 2773 |
| BsmI | GAATGC | 1 cut(s) | 439 |
| BsnI | GGCC | 8 cut(s) | 112, 998, 1153, 1687, 1749, 2099, 2424, 3605 |
| BsoBI | CYCGRG | 1 cut(s) | 876 |
| Bsp120I | GGGCCC | 1 cut(s) | 2422 |
| Bsp1286I | GDGCHC | 7 cut(s) | 435, 937, 1329, 1705, 2426, 2791, 2867 |
| Bsp13I | TCCGGA | 1 cut(s) | 63 |
| BspANI | GGCC | 8 cut(s) | 112, 998, 1153, 1687, 1749, 2099, 2424, 3605 |
| BspCNI | CTCAG | 9 cut(s) | 178, 251, 457, 1028, 1315, 2100, 2886, 3373, 3452 |
| BspDI | ATCGAT | 1 cut(s) | 421 |
| BspEI | TCCGGA | 1 cut(s) | 63 |
| BspFNI | CGCG | 2 cut(s) | 16, 3611 |
| BspHI | TCATGA | 3 cut(s) | 250, 517, 1705 |
| BspMAI | CTGCAG | 1 cut(s) | 1639 |
| BspMI | ACCTGC | 4 cut(s) | 1642, 2962, 3013, 3304 |
| BspPI | GGATC | 8 cut(s) | 149, 152, 284, 978, 991, 1045, 2442, 2455 |
| BspQI | GCTCTTC | 1 cut(s) | 15 |
| BspT107I | GGYRCC | 7 cut(s) | 311, 799, 1922, 1993, 2248, 2738, 3677 |
| BspTI | CTTAAG | 1 cut(s) | 1096 |
| BsrBI | CCGCTC | 1 cut(s) | 164 |
| BsrDI | GCAATG | 2 cut(s) | 686, 2130 |
| BssECI | CCNNGG | 3 cut(s) | 2265, 2538, 3108 |
| BssNI | GRCGYC | 2 cut(s) | 98, 3678 |
| BssT1I | CCWWGG | 2 cut(s) | 2265, 2538 |
| Bst6I | CTCTTC | 4 cut(s) | 15, 203, 2860, 2896 |
| BstACI | GRCGYC | 2 cut(s) | 98, 3678 |
| BstAFI | CTTAAG | 1 cut(s) | 1096 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1643, 2624, 3281 |
| BstBAI | YACGTR | 3 cut(s) | 701, 1385, 1753 |
| BstC8I | GCNNGC | 4 cut(s) | 52, 642, 2356, 2629 |
| BstDSI | CCRYGG | 1 cut(s) | 3108 |
| BstF5I | GGATG | 8 cut(s) | 938, 1417, 1474, 1666, 1729, 2186, 3071, 3179 |
| BstFNI | CGCG | 2 cut(s) | 16, 3611 |
| BstH2I | RGCGCY | 2 cut(s) | 189, 3681 |
| BstHHI | GCGC | 7 cut(s) | 16, 188, 1909, 2633, 3212, 3613, 3680 |
| BstMAI | GTCTC | 5 cut(s) | 348, 1203, 2227, 2274, 3442 |
| BstMCI | CGRYCG | 2 cut(s) | 109, 1688 |
| BstNSI | RCATGY | 1 cut(s) | 1233 |
| BstSFI | CTRYAG | 5 cut(s) | 181, 915, 1635, 1821, 3330 |
| BstSLI | GKGCMC | 3 cut(s) | 937, 2426, 2791 |
| BstSNI | TACGTA | 1 cut(s) | 701 |
| BstUI | CGCG | 2 cut(s) | 16, 3611 |
| BstV2I | GAAGAC | 4 cut(s) | 74, 202, 660, 3375 |
| BstX2I | RGATCY | 7 cut(s) | 141, 482, 827, 839, 983, 1037, 2447 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 980, 1757, 3319 |
| BstYI | RGATCY | 7 cut(s) | 141, 482, 827, 839, 983, 1037, 2447 |
| BstZI | CGGCCG | 1 cut(s) | 1685 |
| Bsu15I | ATCGAT | 1 cut(s) | 421 |
| Bsu36I | CCTNAGG | 1 cut(s) | 44 |
| BsuI | GTATCC | 1 cut(s) | 688 |
| BsuRI | GGCC | 8 cut(s) | 112, 998, 1153, 1687, 1749, 2099, 2424, 3605 |
| BsuTUI | ATCGAT | 1 cut(s) | 421 |
| BtgI | CCRYGG | 1 cut(s) | 3108 |
| BtsCI | GGATG | 8 cut(s) | 938, 1417, 1474, 1666, 1729, 2186, 3071, 3179 |
| BtsI | GCAGTG | 3 cut(s) | 123, 2103, 2728 |
| BveI | ACCTGC | 4 cut(s) | 1642, 2962, 3013, 3304 |
| Cac8I | GCNNGC | 4 cut(s) | 52, 642, 2356, 2629 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1396, 1643, 1976, 3035, 3191 |
| CciI | TCATGA | 3 cut(s) | 250, 517, 1705 |
| CfoI | GCGC | 7 cut(s) | 16, 188, 1909, 2633, 3212, 3613, 3680 |
| Cfr13I | GGNCC | 7 cut(s) | 332, 996, 1046, 2098, 2422, 2423, 2574 |
| ClaI | ATCGAT | 1 cut(s) | 421 |
| CseI | GACGC | 2 cut(s) | 106, 2382 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1143, 1178, 2551, 2586, 3097, 3132 |
| DinI | GGCGCC | 1 cut(s) | 3679 |
| DraIII | CACNNNGTG | 1 cut(s) | 2786 |
| DriI | GACNNNNNGTC | 1 cut(s) | 664 |
| EaeI | YGGCCR | 4 cut(s) | 110, 1685, 1747, 3603 |
| EagI | CGGCCG | 1 cut(s) | 1685 |
| Eam1104I | CTCTTC | 4 cut(s) | 15, 203, 2860, 2896 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 664 |
| EarI | CTCTTC | 4 cut(s) | 15, 203, 2860, 2896 |
| EciI | GGCGGA | 1 cut(s) | 219 |
| Ecl136II | GAGCTC | 2 cut(s) | 433, 2865 |
| EclXI | CGGCCG | 1 cut(s) | 1685 |
| Eco105I | TACGTA | 1 cut(s) | 701 |
| Eco130I | CCWWGG | 2 cut(s) | 2265, 2538 |
| Eco24I | GRGCYC | 4 cut(s) | 435, 1329, 2426, 2867 |
| Eco47I | GGWCC | 3 cut(s) | 332, 1046, 2574 |
| Eco52I | CGGCCG | 1 cut(s) | 1685 |
| Eco53kI | GAGCTC | 2 cut(s) | 433, 2865 |
| Eco57I | CTGAAG | 3 cut(s) | 507, 1854, 1998 |
| Eco72I | CACGTG | 1 cut(s) | 1753 |
| Eco81I | CCTNAGG | 1 cut(s) | 44 |
| Eco88I | CYCGRG | 1 cut(s) | 876 |
| EcoICRI | GAGCTC | 2 cut(s) | 433, 2865 |
| EcoO109I | RGGNCCY | 3 cut(s) | 996, 2423, 2574 |
| EcoRI | GAATTC | 2 cut(s) | 1059, 2543 |
| EcoT14I | CCWWGG | 2 cut(s) | 2265, 2538 |
| EcoT22I | ATGCAT | 1 cut(s) | 3400 |
| EcoT38I | GRGCYC | 4 cut(s) | 435, 1329, 2426, 2867 |
| EgeI | GGCGCC | 1 cut(s) | 3679 |
| EheI | GGCGCC | 1 cut(s) | 3679 |
| ErhI | CCWWGG | 2 cut(s) | 2265, 2538 |
| Esp3I | CGTCTC | 1 cut(s) | 348 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 59, 91 |
| FaqI | GGGAC | 5 cut(s) | 318, 593, 1967, 2734, 2773 |
| FauI | CCCGC | 4 cut(s) | 9, 43, 169, 2936 |
| FbaI | TGATCA | 1 cut(s) | 3352 |
| FblI | GTMKAC | 3 cut(s) | 697, 914, 2985 |
| FokI | GGATG | 8 cut(s) | 925, 1424, 1481, 1653, 1736, 2173, 3058, 3166 |
| FriOI | GRGCYC | 4 cut(s) | 435, 1329, 2426, 2867 |
| GlaI | GCGC | 7 cut(s) | 15, 187, 1908, 2632, 3211, 3612, 3679 |
| GsaI | CCCAGC | 3 cut(s) | 695, 2760, 3478 |
| GsuI | CTGGAG | 7 cut(s) | 318, 372, 1427, 1736, 1832, 2896, 2916 |
| HaeII | RGCGCY | 2 cut(s) | 189, 3681 |
| HaeIII | GGCC | 8 cut(s) | 112, 998, 1153, 1687, 1749, 2099, 2424, 3605 |
| HapII | CCGG | 2 cut(s) | 64, 2451 |
| HgaI | GACGC | 2 cut(s) | 106, 2382 |
| HhaI | GCGC | 7 cut(s) | 16, 188, 1909, 2633, 3212, 3613, 3680 |
| Hin1I | GRCGYC | 2 cut(s) | 98, 3678 |
| Hin6I | GCGC | 7 cut(s) | 14, 186, 1907, 2631, 3210, 3611, 3678 |
| HinP1I | GCGC | 7 cut(s) | 14, 186, 1907, 2631, 3210, 3611, 3678 |
| HincII | GTYRAC | 5 cut(s) | 283, 2520, 3428, 3489, 3715 |
| HindII | GTYRAC | 5 cut(s) | 283, 2520, 3428, 3489, 3715 |
| HindIII | AAGCTT | 2 cut(s) | 170, 648 |
| HinfI | GANTC | 7 cut(s) | 247, 469, 722, 1418, 1592, 2987, 3571 |
| HpaI | GTTAAC | 2 cut(s) | 2520, 3715 |
| HpaII | CCGG | 2 cut(s) | 64, 2451 |
| HphI | GGTGA | 9 cut(s) | 169, 621, 1095, 1178, 1347, 2251, 2463, 3463, 3615 |
| Hpy99I | CGWCG | 3 cut(s) | 100, 158, 1426 |
| HpyAV | CCTTC | 9 cut(s) | 243, 520, 756, 1002, 2407, 3585, 3630, 3693, 3703 |
| HpyCH4IV | ACGT | 8 cut(s) | 116, 496, 700, 1384, 1752, 1883, 3266, 3461 |
| HpySE526I | ACGT | 8 cut(s) | 116, 496, 700, 1384, 1752, 1883, 3266, 3461 |
| Hsp92I | GRCGYC | 2 cut(s) | 98, 3678 |
| HspAI | GCGC | 7 cut(s) | 14, 186, 1907, 2631, 3210, 3611, 3678 |
| KasI | GGCGCC | 1 cut(s) | 3677 |
| Kpn2I | TCCGGA | 1 cut(s) | 63 |
| KpnI | GGTACC | 4 cut(s) | 1926, 1997, 2252, 2742 |
| Ksp22I | TGATCA | 1 cut(s) | 3352 |
| KspAI | GTTAAC | 2 cut(s) | 2520, 3715 |
| LguI | GCTCTTC | 1 cut(s) | 15 |
| MaeII | ACGT | 8 cut(s) | 116, 496, 700, 1384, 1752, 1883, 3266, 3461 |
| MbiI | CCGCTC | 1 cut(s) | 164 |
| MflI | RGATCY | 7 cut(s) | 141, 482, 827, 839, 983, 1037, 2447 |
| MhlI | GDGCHC | 7 cut(s) | 435, 937, 1329, 1705, 2426, 2791, 2867 |
| MlsI | TGGCCA | 2 cut(s) | 1749, 3605 |
| MluNI | TGGCCA | 2 cut(s) | 1749, 3605 |
| Mly113I | GGCGCC | 1 cut(s) | 3678 |
| MlyI | GAGTC | 1 cut(s) | 2981 |
| MmeI | TCCRAC | 4 cut(s) | 2085, 3177, 3221, 3585 |
| Mox20I | TGGCCA | 2 cut(s) | 1749, 3605 |
| Mph1103I | ATGCAT | 1 cut(s) | 3400 |
| MroI | TCCGGA | 1 cut(s) | 63 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2533, 2731 |
| MscI | TGGCCA | 2 cut(s) | 1749, 3605 |
| MslI | CAYNNNNRTG | 2 cut(s) | 732, 1518 |
| Msp20I | TGGCCA | 2 cut(s) | 1749, 3605 |
| MspA1I | CMGCKG | 1 cut(s) | 1802 |
| MspCI | CTTAAG | 1 cut(s) | 1096 |
| MspI | CCGG | 2 cut(s) | 64, 2451 |
| Mva1269I | GAATGC | 1 cut(s) | 439 |
| MvnI | CGCG | 2 cut(s) | 16, 3611 |
| NarI | GGCGCC | 1 cut(s) | 3678 |
| NmuCI | GTSAC | 3 cut(s) | 1248, 1559, 2239 |
| NsiI | ATGCAT | 1 cut(s) | 3400 |
| NspI | RCATGY | 1 cut(s) | 1233 |
| PaeR7I | CTCGAG | 1 cut(s) | 876 |
| PagI | TCATGA | 3 cut(s) | 250, 517, 1705 |
| PaqCI | CACCTGC | 1 cut(s) | 3013 |
| PciI | ACATGT | 1 cut(s) | 1229 |
| PciSI | GCTCTTC | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 439 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2533, 2731 |
| PfeI | GAWTC | 6 cut(s) | 247, 469, 722, 1418, 1592, 3571 |
| Pfl23II | CGTACG | 2 cut(s) | 102, 863 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 809 |
| PfoI | TCCNGGA | 2 cut(s) | 295, 1431 |
| Ple19I | CGATCG | 1 cut(s) | 109 |
| PleI | GAGTC | 1 cut(s) | 2981 |
| PluTI | GGCGCC | 1 cut(s) | 3681 |
| PmaCI | CACGTG | 1 cut(s) | 1753 |
| PmlI | CACGTG | 1 cut(s) | 1753 |
| PpsI | GAGTC | 1 cut(s) | 2981 |
| Ppu21I | YACGTR | 3 cut(s) | 701, 1385, 1753 |
| PpuMI | RGGWCCY | 1 cut(s) | 2574 |
| PscI | ACATGT | 1 cut(s) | 1229 |
| PshBI | ATTAAT | 1 cut(s) | 1743 |
| PsiI | TTATAA | 1 cut(s) | 1449 |
| Psp124BI | GAGCTC | 2 cut(s) | 435, 2867 |
| Psp5II | RGGWCCY | 1 cut(s) | 2574 |
| PspCI | CACGTG | 1 cut(s) | 1753 |
| PspFI | CCCAGC | 3 cut(s) | 691, 2756, 3474 |
| PspLI | CGTACG | 2 cut(s) | 102, 863 |
| PspOMI | GGGCCC | 1 cut(s) | 2422 |
| PspPI | GGNCC | 7 cut(s) | 332, 996, 1046, 2098, 2422, 2423, 2574 |
| PspPPI | RGGWCCY | 1 cut(s) | 2574 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 76, 108 |
| PstI | CTGCAG | 1 cut(s) | 1639 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1396, 1643, 1976, 3035, 3191 |
| PsuI | RGATCY | 7 cut(s) | 141, 482, 827, 839, 983, 1037, 2447 |
| PvuI | CGATCG | 1 cut(s) | 109 |
| PvuII | CAGCTG | 1 cut(s) | 1802 |
| RseI | CAYNNNNRTG | 2 cut(s) | 732, 1518 |
| SacI | GAGCTC | 2 cut(s) | 435, 2867 |
| SapI | GCTCTTC | 1 cut(s) | 15 |
| Sau96I | GGNCC | 7 cut(s) | 332, 996, 1046, 2098, 2422, 2423, 2574 |
| ScaI | AGTACT | 2 cut(s) | 328, 2917 |
| SchI | GAGTC | 1 cut(s) | 2981 |
| SduI | GDGCHC | 7 cut(s) | 435, 937, 1329, 1705, 2426, 2791, 2867 |
| SfcI | CTRYAG | 5 cut(s) | 181, 915, 1635, 1821, 3330 |
| SfoI | GGCGCC | 1 cut(s) | 3679 |
| Sfr274I | CTCGAG | 1 cut(s) | 876 |
| SinI | GGWCC | 3 cut(s) | 332, 1046, 2574 |
| SlaI | CTCGAG | 1 cut(s) | 876 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 732, 1518 |
| SmlI | CTYRAG | 6 cut(s) | 374, 831, 876, 1096, 2052, 3076 |
| SmoI | CTYRAG | 6 cut(s) | 374, 831, 876, 1096, 2052, 3076 |
| SnaBI | TACGTA | 1 cut(s) | 701 |
| SpeI | ACTAGT | 1 cut(s) | 2141 |
| SspDI | GGCGCC | 1 cut(s) | 3677 |
| SstI | GAGCTC | 2 cut(s) | 435, 2867 |
| StyI | CCWWGG | 2 cut(s) | 2265, 2538 |
| TaiI | ACGT | 8 cut(s) | 119, 499, 703, 1387, 1755, 1886, 3269, 3464 |
| TaqI | TCGA | 6 cut(s) | 156, 421, 706, 778, 877, 1424 |
| TaqII | GACCGA | 1 cut(s) | 942 |
| TatI | WGTACW | 6 cut(s) | 326, 599, 893, 1571, 1780, 2915 |
| TauI | GCSGC | 7 cut(s) | 57, 138, 576, 800, 1268, 2322, 2774 |
| TfiI | GAWTC | 6 cut(s) | 247, 469, 722, 1418, 1592, 3571 |
| TseFI | GTSAC | 3 cut(s) | 1248, 1559, 2239 |
| Tsp45I | GTSAC | 3 cut(s) | 1248, 1559, 2239 |
| TspGWI | ACGGA | 3 cut(s) | 1130, 1236, 3327 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 809 |
| Vha464I | CTTAAG | 1 cut(s) | 1096 |
| VneI | GTGCAC | 2 cut(s) | 933, 2787 |
| VpaK11BI | GGWCC | 3 cut(s) | 332, 1046, 2574 |
| VspI | ATTAAT | 1 cut(s) | 1743 |
| XapI | RAATTY | 8 cut(s) | 381, 1059, 1427, 2001, 2213, 2257, 2543, 2969 |
| XbaI | TCTAGA | 2 cut(s) | 472, 1088 |
| XceI | RCATGY | 1 cut(s) | 1233 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1180, 2471 |
| XhoI | CTCGAG | 1 cut(s) | 876 |
| XmiI | GTMKAC | 3 cut(s) | 697, 914, 2985 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2533, 2731 |
| ZrmI | AGTACT | 2 cut(s) | 328, 2917 |
| Zsp2I | ATGCAT | 1 cut(s) | 3400 |