Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0009187

Physical Location & Seq

Genomic Coordinates Reverse (-)

6818385 .. 6823982

Gene Structure 5598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g06810.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

ATGGGGGATGTAGCGAAAGATCTAGCCTCTGGAACCGTAGGTGGGGTAGCGCAATTAGTAGTCGGGCATCCATTTGATACCATCAAGGTTAAACTCCAAAGCCAGCCTGCTCCAGTCCCTGGACAACCTCCTAAGTTCTCAGGTGCTATGGATGCTGTCAGGCAGACATTAGCTGCTGAAGGCCCAAGGGGTCTCTACAAAGGCATGGGAGCTCCGCTTGCGACTGTTGCAGTCTTCAATGCCGTCCTCTTCACAGTAAGAGGGCAAATGGAGACTCTATTGAGATCTGAACCTGGTGTGCCCCTTACTGTTGGCCAACAGGTCATTGCTGGGGCTGGGGCTGGATTAGCCGTGTCCTTCCTAGCATGCCCCACTGAGTTGATCAAGTGCAGATTGCAAGCGCAGAGTGCAATGGCGGAGACTGGTGCTGGTGCTGTTGCTGTTGCAGTGAAGTATGGAGGGCCAATGGATGTGGCAAAGCAAGTACTTAAATCAGAAGGGGGTGCAAGGGGTCTCTTCAAGGGCTTGGTTCCCACAATGGCACGTGAAATACCTGGAAATGCTGCAATGTTTGGTGTCTATGAAGCAATCAAGCAGTGGCTTGCTGGAGGTCAGGATACTTCTGGGCTGGGAAGAGGTTCTTTAATGGCGGCTGGAGGTTTGGCTGGAGCAGCGTTCTGGGCCGCTGTGTATCCTACTGATGTTGTCAAGAGTGTACTTCAGGTAGATGATTACAAAAACCCAAAGTTCTCTGGTTCAGTTGATGCATTTAGAAAGATCCTGGCCTCAGAAGGAGCCAAAGGCCTCTATAAGGGATTTGGACCAGCTATGTCTAGAAGTATTCCAGCTAATGCAGCATGTTTCTTGGCATATGAGGTCACAAGGTCAAGTTTGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000064 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006855 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009507 GO:0009536 GO:0015075 GO:0015171 GO:0015179 GO:0015238 GO:0015318 GO:0015711 GO:0015807 GO:0015822 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098655 GO:0098656 GO:1902475 GO:1903352 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

300

Amino Acids

30.51

Weight (kDa)

9.4

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	4 - 95	7.1e-19	Mitochondrial carrier protein
Mito_carr	PF00153	102 - 202	2.2e-22	Mitochondrial carrier protein
Mito_carr	PF00153	215 - 297	9e-23	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46800 AT5G46800 AT5G46800
fragaria_vesca	FvH4_7g06810 FvH4_7g06810 FvH4_7g06810
malus_domestica	MD06G1033900.v1.1 MD16G1274700.v1.1
prunus_persica	Prupe.8G063200_v2.0.a1 Prupe.8G063200_v2.0.a1
pyrus_communis	pycom06g02800 pycom16g24480
rosa_chinensis	RchiOBHm_Chr7g0209661
rosa_laevigata	RLG00000003106
rosa_multiflora	Rmu_sc0021920.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249170
rosa_rugosa	Rorug07G0115100
rosa_samantha	Rh7AG248800 Rh7BG242800 Rh7CG264700 Rh7DG254700
rosa_wichuraiana	Rw7G021100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	119
AciI	CCGC	4 cut(s)	215, 416, 650, 684
AclWI	GGATC	1 cut(s)	772
AcoI	YGGCCR	1 cut(s)	313
AcuI	CTGAAG	2 cut(s)	198, 704
AcvI	CACGTG	1 cut(s)	545
AfaI	GTAC	2 cut(s)	486, 717
AfiI	CCNNNNNNNGG	3 cut(s)	42, 119, 811
AgsI	TTSAA	2 cut(s)	238, 520
AjnI	CCWGG	4 cut(s)	118, 292, 553, 780
AluBI	AGCT	4 cut(s)	173, 212, 827, 848
AluI	AGCT	4 cut(s)	173, 212, 827, 848
Alw21I	GWGCWC	1 cut(s)	214
Alw26I	GTCTC	4 cut(s)	197, 266, 413, 518
AlwI	GGATC	1 cut(s)	772
AlwNI	CAGNNNCTG	1 cut(s)	119
AoxI	GGCC	6 cut(s)	181, 313, 461, 681, 783, 802
ApeKI	GCWGC	4 cut(s)	173, 563, 671, 854
Asp700I	GAANNNNTTC	1 cut(s)	637
AspLEI	GCGC	2 cut(s)	52, 403
AspS9I	GGNCC	4 cut(s)	182, 461, 681, 821
AvaII	GGWCC	1 cut(s)	821
BaeGI	GKGCMC	1 cut(s)	303
BalI	TGGCCA	1 cut(s)	315
BanII	GRGCYC	1 cut(s)	214
BbrPI	CACGTG	1 cut(s)	545
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	1 cut(s)	214
BbvI	GCAGC	4 cut(s)	160, 550, 683, 866
BccI	CCATC	1 cut(s)	89
BceAI	ACGGC	2 cut(s)	227, 335
BciT130I	CCWGG	4 cut(s)	120, 294, 555, 782
BciVI	GTATCC	2 cut(s)	610, 702
BclI	TGATCA	1 cut(s)	381
BcoDI	GTCTC	4 cut(s)	197, 266, 413, 518
BfaI	CTAG	3 cut(s)	23, 362, 834
BfuI	GTATCC	2 cut(s)	610, 702
BglII	AGATCT	2 cut(s)	19, 284
BisI	GCNGC	6 cut(s)	174, 564, 651, 672, 684, 855
BlsI	GCNGC	6 cut(s)	175, 565, 652, 673, 685, 856
BmcAI	AGTACT	1 cut(s)	486
Bme1390I	CCNGG	4 cut(s)	120, 294, 555, 782
Bme18I	GGWCC	1 cut(s)	821
BmgT120I	GGNCC	4 cut(s)	182, 461, 681, 821
BmiI	GGNNCC	3 cut(s)	34, 531, 796
BmrFI	CCNGG	4 cut(s)	120, 294, 555, 782
BmsI	GCATC	3 cut(s)	76, 142, 754
BpiI	GAAGAC	1 cut(s)	226
BpmI	CTGGAG	4 cut(s)	96, 627, 675, 687
BsaAI	YACGTR	1 cut(s)	545
BsaI	GGTCTC	2 cut(s)	197, 518
BsaJI	CCNNGG	2 cut(s)	118, 185
Bsc4I	CCNNNNNNNGG	3 cut(s)	42, 119, 811
Bse1I	ACTGG	2 cut(s)	113, 427
Bse3DI	GCAATG	3 cut(s)	324, 417, 573
BseBI	CCWGG	4 cut(s)	120, 294, 555, 782
BseDI	CCNNGG	2 cut(s)	118, 185
BseGI	GGATG	4 cut(s)	13, 67, 157, 475
BseLI	CCNNNNNNNGG	3 cut(s)	42, 119, 811
BseMI	GCAATG	3 cut(s)	324, 417, 573
BseMII	CTCAG	3 cut(s)	153, 366, 801
BseNI	ACTGG	2 cut(s)	113, 427
BseSI	GKGCMC	1 cut(s)	303
BseXI	GCAGC	4 cut(s)	160, 550, 683, 866
BseYI	CCCAGC	3 cut(s)	329, 335, 628
BsgI	GTGCAG	1 cut(s)	409
BshFI	GGCC	6 cut(s)	183, 315, 463, 683, 785, 804
BsiHKAI	GWGCWC	1 cut(s)	214
BslFI	GGGAC	1 cut(s)	101
BslI	CCNNNNNNNGG	3 cut(s)	42, 119, 811
BsmAI	GTCTC	4 cut(s)	197, 266, 413, 518
BsmFI	GGGAC	1 cut(s)	101
BsnI	GGCC	6 cut(s)	183, 315, 463, 683, 785, 804
Bso31I	GGTCTC	2 cut(s)	197, 518
Bsp1286I	GDGCHC	2 cut(s)	214, 303
Bsp143I	GATC	4 cut(s)	19, 284, 381, 777
BspACI	CCGC	4 cut(s)	215, 416, 650, 684
BspANI	GGCC	6 cut(s)	183, 315, 463, 683, 785, 804
BspCNI	CTCAG	3 cut(s)	152, 367, 800
BspLI	GGNNCC	3 cut(s)	34, 531, 796
BspPI	GGATC	1 cut(s)	772
BspTNI	GGTCTC	2 cut(s)	197, 518
BsrDI	GCAATG	3 cut(s)	324, 417, 573
BsrI	ACTGG	2 cut(s)	113, 427
BssECI	CCNNGG	2 cut(s)	118, 185
BssMI	GATC	4 cut(s)	19, 284, 381, 777
BssT1I	CCWWGG	1 cut(s)	185
Bst2UI	CCWGG	4 cut(s)	120, 294, 555, 782
Bst4CI	ACNGT	4 cut(s)	37, 226, 256, 310
Bst6I	CTCTTC	3 cut(s)	254, 521, 628
BstBAI	YACGTR	1 cut(s)	545
BstC8I	GCNNGC	6 cut(s)	104, 108, 219, 367, 399, 603
BstDEI	CTNAG	4 cut(s)	132, 139, 375, 787
BstENI	CCTNNNNNAGG	1 cut(s)	809
BstF5I	GGATG	4 cut(s)	13, 67, 157, 475
BstHHI	GCGC	2 cut(s)	52, 403
BstKTI	GATC	4 cut(s)	22, 287, 384, 780
BstMAI	GTCTC	4 cut(s)	197, 266, 413, 518
BstMBI	GATC	4 cut(s)	19, 284, 381, 777
BstMWI	GCNNNNNNNGC	8 cut(s)	152, 218, 227, 347, 407, 671, 680, 854
BstNI	CCWGG	4 cut(s)	120, 294, 555, 782
BstNSI	RCATGY	2 cut(s)	369, 861
BstSCI	CCNGG	4 cut(s)	118, 292, 553, 780
BstSLI	GKGCMC	1 cut(s)	303
BstV1I	GCAGC	4 cut(s)	160, 550, 683, 866
BstV2I	GAAGAC	1 cut(s)	226
BstX2I	RGATCY	3 cut(s)	19, 284, 777
BstYI	RGATCY	3 cut(s)	19, 284, 777
BsuI	GTATCC	2 cut(s)	610, 702
BsuRI	GGCC	6 cut(s)	183, 315, 463, 683, 785, 804
BtsCI	GGATG	4 cut(s)	13, 67, 157, 475
BtsI	GCAGTG	2 cut(s)	453, 602
BtsIMutI	CAGTG	3 cut(s)	372, 453, 602
Cac8I	GCNNGC	6 cut(s)	104, 108, 219, 367, 399, 603
CaiI	CAGNNNCTG	1 cut(s)	119
CfoI	GCGC	2 cut(s)	52, 403
Cfr13I	GGNCC	4 cut(s)	182, 461, 681, 821
CsiI	ACCWGGT	1 cut(s)	292
Csp6I	GTAC	2 cut(s)	485, 716
CspCI	CAANNNNNGTGG	2 cut(s)	453, 488
CviAII	CATG	3 cut(s)	205, 366, 858
CviQI	GTAC	2 cut(s)	485, 716
DdeI	CTNAG	4 cut(s)	132, 139, 375, 787
DpnI	GATC	4 cut(s)	21, 286, 383, 779
DpnII	GATC	4 cut(s)	19, 284, 381, 777
EaeI	YGGCCR	1 cut(s)	313
Eam1104I	CTCTTC	3 cut(s)	254, 521, 628
EarI	CTCTTC	3 cut(s)	254, 521, 628
EciI	GGCGGA	1 cut(s)	431
Ecl136II	GAGCTC	1 cut(s)	212
Eco130I	CCWWGG	1 cut(s)	185
Eco147I	AGGCCT	1 cut(s)	804
Eco24I	GRGCYC	1 cut(s)	214
Eco31I	GGTCTC	2 cut(s)	197, 518
Eco47I	GGWCC	1 cut(s)	821
Eco53kI	GAGCTC	1 cut(s)	212
Eco57I	CTGAAG	2 cut(s)	198, 704
Eco72I	CACGTG	1 cut(s)	545
EcoICRI	GAGCTC	1 cut(s)	212
EcoNI	CCTNNNNNAGG	1 cut(s)	809
EcoRII	CCWGG	4 cut(s)	118, 292, 553, 780
EcoT14I	CCWWGG	1 cut(s)	185
EcoT22I	ATGCAT	1 cut(s)	769
EcoT38I	GRGCYC	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	185
FaeI	CATG	3 cut(s)	208, 369, 861
FalI	AAGNNNNNCTT	2 cut(s)	625, 657
FaqI	GGGAC	1 cut(s)	101
FatI	CATG	3 cut(s)	204, 365, 857
FauNDI	CATATG	1 cut(s)	871
FbaI	TGATCA	1 cut(s)	381
Fnu4HI	GCNGC	6 cut(s)	174, 564, 651, 672, 684, 855
FokI	GGATG	4 cut(s)	20, 54, 164, 482
FriOI	GRGCYC	1 cut(s)	214
Fsp4HI	GCNGC	6 cut(s)	174, 564, 651, 672, 684, 855
FspBI	CTAG	3 cut(s)	23, 362, 834
GlaI	GCGC	2 cut(s)	51, 402
GluI	GCNGC	6 cut(s)	174, 564, 651, 672, 684, 855
GsaI	CCCAGC	3 cut(s)	333, 339, 632
GsuI	CTGGAG	4 cut(s)	96, 627, 675, 687
HaeIII	GGCC	6 cut(s)	183, 315, 463, 683, 785, 804
HhaI	GCGC	2 cut(s)	52, 403
Hin1II	CATG	3 cut(s)	208, 369, 861
Hin6I	GCGC	2 cut(s)	50, 401
HinP1I	GCGC	2 cut(s)	50, 401
HinfI	GANTC	1 cut(s)	274
Hpy166II	GTNNAC	1 cut(s)	716
Hpy188I	TCNGA	3 cut(s)	289, 496, 790
Hpy188III	TCNNGA	4 cut(s)	30, 614, 709, 834
Hpy8I	GTNNAC	1 cut(s)	716
HpyAV	CCTTC	4 cut(s)	173, 367, 491, 785
HpyCH4III	ACNGT	4 cut(s)	37, 226, 256, 310
HpyCH4IV	ACGT	1 cut(s)	544
HpyCH4V	TGCA	9 cut(s)	230, 390, 397, 410, 446, 506, 566, 767, 854
HpyF10VI	GCNNNNNNNGC	8 cut(s)	152, 218, 227, 347, 407, 671, 680, 854
HpyF3I	CTNAG	4 cut(s)	132, 139, 375, 787
HpySE526I	ACGT	1 cut(s)	544
Hsp92II	CATG	3 cut(s)	208, 369, 861
HspAI	GCGC	2 cut(s)	50, 401
Ksp22I	TGATCA	1 cut(s)	381
Kzo9I	GATC	4 cut(s)	19, 284, 381, 777
LmnI	GCTCC	5 cut(s)	115, 209, 217, 668, 794
Lsp1109I	GCAGC	4 cut(s)	160, 550, 683, 866
LweI	GCATC	3 cut(s)	76, 142, 754
MabI	ACCWGGT	1 cut(s)	292
MaeI	CTAG	3 cut(s)	23, 362, 834
MaeII	ACGT	1 cut(s)	544
MaeIII	GTNAC	1 cut(s)	877
MalI	GATC	4 cut(s)	21, 286, 383, 779
MboI	GATC	4 cut(s)	19, 284, 381, 777
MboII	GAAGA	4 cut(s)	226, 241, 508, 645
MflI	RGATCY	3 cut(s)	19, 284, 777
MhlI	GDGCHC	2 cut(s)	214, 303
MlsI	TGGCCA	1 cut(s)	315
MluCI	AATT	1 cut(s)	53
MluNI	TGGCCA	1 cut(s)	315
MlyI	GAGTC	1 cut(s)	268
Mox20I	TGGCCA	1 cut(s)	315
Mph1103I	ATGCAT	1 cut(s)	769
MroXI	GAANNNNTTC	1 cut(s)	637
MscI	TGGCCA	1 cut(s)	315
MseI	TTAA	3 cut(s)	90, 489, 644
Msp20I	TGGCCA	1 cut(s)	315
MspA1I	CMGCKG	1 cut(s)	686
MspR9I	CCNGG	4 cut(s)	120, 294, 555, 782
MvaI	CCWGG	4 cut(s)	120, 294, 555, 782
MwoI	GCNNNNNNNGC	8 cut(s)	152, 218, 227, 347, 407, 671, 680, 854
NdeI	CATATG	1 cut(s)	871
NdeII	GATC	4 cut(s)	19, 284, 381, 777
NlaIII	CATG	3 cut(s)	208, 369, 861
NlaIV	GGNNCC	3 cut(s)	34, 531, 796
NmuCI	GTSAC	1 cut(s)	877
NsiI	ATGCAT	1 cut(s)	769
NspI	RCATGY	2 cut(s)	369, 861
PaeI	GCATGC	1 cut(s)	369
PceI	AGGCCT	1 cut(s)	804
PdmI	GAANNNNTTC	1 cut(s)	637
PflMI	CCANNNNNTGG	1 cut(s)	119
PkrI	GCNGC	6 cut(s)	175, 565, 652, 673, 685, 856
PleI	GAGTC	1 cut(s)	268
PmaCI	CACGTG	1 cut(s)	545
PmlI	CACGTG	1 cut(s)	545
PpsI	GAGTC	1 cut(s)	268
Ppu21I	YACGTR	1 cut(s)	545
Psp124BI	GAGCTC	1 cut(s)	214
Psp6I	CCWGG	4 cut(s)	118, 292, 553, 780
PspCI	CACGTG	1 cut(s)	545
PspFI	CCCAGC	3 cut(s)	329, 335, 628
PspGI	CCWGG	4 cut(s)	118, 292, 553, 780
PspN4I	GGNNCC	3 cut(s)	34, 531, 796
PspPI	GGNCC	4 cut(s)	182, 461, 681, 821
PstNI	CAGNNNCTG	1 cut(s)	119
PsuI	RGATCY	3 cut(s)	19, 284, 777
RsaI	GTAC	2 cut(s)	486, 717
RsaNI	GTAC	2 cut(s)	485, 716
SacI	GAGCTC	1 cut(s)	214
SaqAI	TTAA	3 cut(s)	90, 489, 644
SatI	GCNGC	6 cut(s)	174, 564, 651, 672, 684, 855
Sau3AI	GATC	4 cut(s)	19, 284, 381, 777
Sau96I	GGNCC	4 cut(s)	182, 461, 681, 821
ScaI	AGTACT	1 cut(s)	486
SchI	GAGTC	1 cut(s)	268
ScrFI	CCNGG	4 cut(s)	120, 294, 555, 782
SduI	GDGCHC	2 cut(s)	214, 303
SexAI	ACCWGGT	1 cut(s)	292
SfaNI	GCATC	3 cut(s)	76, 142, 754
SinI	GGWCC	1 cut(s)	821
SphI	GCATGC	1 cut(s)	369
Sse9I	AATT	1 cut(s)	53
SseBI	AGGCCT	1 cut(s)	804
SsiI	CCGC	4 cut(s)	215, 416, 650, 684
SspMI	CTAG	3 cut(s)	23, 362, 834
SstI	GAGCTC	1 cut(s)	214
StuI	AGGCCT	1 cut(s)	804
StyD4I	CCNGG	4 cut(s)	118, 292, 553, 780
StyI	CCWWGG	1 cut(s)	185
TaaI	ACNGT	4 cut(s)	37, 226, 256, 310
TaiI	ACGT	1 cut(s)	547
TasI	AATT	1 cut(s)	53
TatI	WGTACW	2 cut(s)	484, 715
TauI	GCSGC	2 cut(s)	653, 686
Tru1I	TTAA	3 cut(s)	90, 489, 644
Tru9I	TTAA	3 cut(s)	90, 489, 644
TscAI	CASTG	3 cut(s)	379, 453, 602
TseFI	GTSAC	1 cut(s)	877
TseI	GCWGC	4 cut(s)	173, 563, 671, 854
Tsp45I	GTSAC	1 cut(s)	877
TspDTI	ATGAA	1 cut(s)	597
TspRI	CASTG	3 cut(s)	379, 453, 602
Van91I	CCANNNNNTGG	1 cut(s)	119
VpaK11BI	GGWCC	1 cut(s)	821
XagI	CCTNNNNNAGG	1 cut(s)	809
XbaI	TCTAGA	1 cut(s)	833
XceI	RCATGY	2 cut(s)	369, 861
XmnI	GAANNNNTTC	1 cut(s)	637
XspI	CTAG	3 cut(s)	23, 362, 834
ZrmI	AGTACT	1 cut(s)	486
Zsp2I	ATGCAT	1 cut(s)	769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.