Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009187

Physical Location & Seq

Genomic Coordinates Forward (+)

9169924 .. 9176111

Gene Structure 6188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G063200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 894 bp

ATGGGGGAAGTAGTCAAGGACTTGACCGCCGGGACTGTTGGAGGGGCAGCACAGTTAGTATGTGGGCACCCATTTGATACAATAAAGGTTAAACTCCAAAGCCAGCCTAATCCACTCCCTGGACAACCTCCCAAGTTCTCAGGTGCTATTGATGCTGTCAAGCAGACATTAGCTGCTGAAGGCGCAGGGGGTCTCTACAAAGGTATGGGAGCTCCACTTGCCACTGTGGCAGCCTTCAATGCTGTCCTCTTTGCGGTAAGAGGCCAAATGGAGACGTTGTTGAGGTCTCAACCTGGTGCCCCACTTACAGTGGGCCAGCAGGTCATTTGTGGGGCTGGGGCTGGAGTAGCTGTGTCCTTTCTAGCATGCCCCACTGAGTTGATCAAGTGCAGGTTGCAAGCCCAGAGTGCAATGGGTGATAGTGGCTCAGTGGGTGCCACAGTGAAGTACGGAGGACCATTGGATGTGGCCAAGCAGGTACTTAGATCAGAAGGGGGTACGAGGGGTCTCTTCAAGGGCTTGGTTCCGACTATGGCACGCGAAATACCTGGAAATGCTGCACTGTTTGGTGCCTATGAAGCACTTAAGCAGTTCTTTGCTGGAGGCCAGGACACTTCTGGCTTGGGAAGAGGCTCTTTAATTGTGGCTGGAGGCTTGGCTGGAGCAGCTTTCTGGGCCTCTGTCTACCCTACTGATGTTGTCAAGAGTGTAATTCAGGTAGATGATTACAAAAATCCGAAGTTTTCGGGCTCAATTGATGCGTTTAGAAAGATCCTGGCCTCAGAGGGAGTCAAAGGCCTCTACAGGGGCTTTGGACCAGCTATGGCTAGAAGTGTTCCAGCCAATGCAGCGTGCTTCTTGGCATACGAGGTTACAAGGTCGAGTTTGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000064 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006855 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009507 GO:0009536 GO:0015075 GO:0015171 GO:0015179 GO:0015238 GO:0015318 GO:0015711 GO:0015807 GO:0015822 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098655 GO:0098656 GO:1902475 GO:1903352 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

298

Amino Acids

30.24

Weight (kDa)

9.28

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46800 AT5G46800 AT5G46800
fragaria_vesca	FvH4_7g06810 FvH4_7g06810 FvH4_7g06810
malus_domestica	MD06G1033900.v1.1 MD16G1274700.v1.1
prunus_persica	Prupe.8G063200_v2.0.a1 Prupe.8G063200_v2.0.a1
pyrus_communis	pycom06g02800 pycom16g24480
rosa_chinensis	RchiOBHm_Chr7g0209661
rosa_laevigata	RLG00000003106
rosa_multiflora	Rmu_sc0021920.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249170
rosa_rugosa	Rorug07G0115100
rosa_samantha	Rh7AG248800 Rh7BG242800 Rh7CG264700 Rh7DG254700
rosa_wichuraiana	Rw7G021100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	310, 381, 466
AccB1I	GGYRCC	4 cut(s)	66, 296, 434, 569
AccB7I	CCANNNNNTGG	1 cut(s)	119
AccI	GTMKAC	1 cut(s)	684
AccII	CGCG	1 cut(s)	540
AciI	CCGC	2 cut(s)	27, 254
AclWI	GGATC	1 cut(s)	766
AcoI	YGGCCR	1 cut(s)	468
AcuI	CTGAAG	1 cut(s)	198
AfaI	GTAC	3 cut(s)	449, 480, 499
AfiI	CCNNNNNNNGG	3 cut(s)	119, 253, 805
AflII	CTTAAG	1 cut(s)	584
AgsI	TTSAA	2 cut(s)	238, 514
AjnI	CCWGG	5 cut(s)	118, 292, 547, 606, 774
AluBI	AGCT	5 cut(s)	173, 212, 350, 668, 821
AluI	AGCT	5 cut(s)	173, 212, 350, 668, 821
Alw21I	GWGCWC	1 cut(s)	214
Alw26I	GTCTC	4 cut(s)	197, 266, 291, 512
AlwI	GGATC	1 cut(s)	766
AoxI	GGCC	7 cut(s)	262, 313, 468, 604, 675, 777, 796
ApeKI	GCWGC	6 cut(s)	47, 173, 230, 557, 665, 848
AspLEI	GCGC	1 cut(s)	185
AspS9I	GGNCC	4 cut(s)	313, 455, 675, 815
AsuC2I	CCSGG	1 cut(s)	31
AsuHPI	GGTGA	1 cut(s)	428
AvaII	GGWCC	2 cut(s)	455, 815
BaeGI	GKGCMC	2 cut(s)	69, 301
BalI	TGGCCA	1 cut(s)	470
BanI	GGYRCC	4 cut(s)	66, 296, 434, 569
BanII	GRGCYC	2 cut(s)	214, 752
Bbv12I	GWGCWC	1 cut(s)	214
BbvI	GCAGC	6 cut(s)	59, 160, 242, 544, 677, 860
BciT130I	CCWGG	5 cut(s)	120, 294, 549, 608, 776
BclI	TGATCA	1 cut(s)	381
BcnI	CCSGG	1 cut(s)	31
BcoDI	GTCTC	4 cut(s)	197, 266, 291, 512
BfaI	CTAG	2 cut(s)	362, 828
BfmI	CTRYAG	1 cut(s)	802
BfrI	CTTAAG	1 cut(s)	584
BfuAI	ACCTGC	3 cut(s)	310, 381, 466
BglI	GCCNNNNNGGC	1 cut(s)	227
BisI	GCNGC	6 cut(s)	48, 174, 231, 558, 666, 849
BlsI	GCNGC	6 cut(s)	49, 175, 232, 559, 667, 850
Bme1390I	CCNGG	6 cut(s)	31, 120, 294, 549, 608, 776
Bme18I	GGWCC	2 cut(s)	455, 815
BmgT120I	GGNCC	4 cut(s)	313, 455, 675, 815
BmiI	GGNNCC	5 cut(s)	68, 298, 436, 525, 571
BmrFI	CCNGG	6 cut(s)	31, 120, 294, 549, 608, 776
BmsI	GCATC	2 cut(s)	142, 748
BpmI	CTGGAG	4 cut(s)	363, 621, 669, 681
BpuMI	CCSGG	1 cut(s)	31
BsaI	GGTCTC	3 cut(s)	197, 291, 512
BsaJI	CCNNGG	1 cut(s)	118
BsaXI	ACNNNNNCTCC	4 cut(s)	263, 293, 336, 366
Bsc4I	CCNNNNNNNGG	3 cut(s)	119, 253, 805
Bse3DI	GCAATG	1 cut(s)	417
BseBI	CCWGG	5 cut(s)	120, 294, 549, 608, 776
BseDI	CCNNGG	1 cut(s)	118
BseGI	GGATG	1 cut(s)	469
BseLI	CCNNNNNNNGG	3 cut(s)	119, 253, 805
BseMI	GCAATG	1 cut(s)	417
BseMII	CTCAG	4 cut(s)	153, 366, 441, 795
BseSI	GKGCMC	2 cut(s)	69, 301
BseXI	GCAGC	6 cut(s)	59, 160, 242, 544, 677, 860
BseYI	CCCAGC	1 cut(s)	335
BsgI	GTGCAG	2 cut(s)	409, 543
Bsh1236I	CGCG	1 cut(s)	540
BshFI	GGCC	7 cut(s)	264, 315, 470, 606, 677, 779, 798
BshNI	GGYRCC	4 cut(s)	66, 296, 434, 569
BsiHKAI	GWGCWC	1 cut(s)	214
BsiSI	CCGG	1 cut(s)	30
BslFI	GGGAC	1 cut(s)	46
BslI	CCNNNNNNNGG	3 cut(s)	119, 253, 805
BsmAI	GTCTC	4 cut(s)	197, 266, 291, 512
BsmBI	CGTCTC	1 cut(s)	266
BsmFI	GGGAC	1 cut(s)	46
BsnI	GGCC	7 cut(s)	264, 315, 470, 606, 677, 779, 798
Bso31I	GGTCTC	3 cut(s)	197, 291, 512
Bsp1286I	GDGCHC	4 cut(s)	69, 214, 301, 752
Bsp143I	GATC	3 cut(s)	381, 485, 771
BspACI	CCGC	2 cut(s)	27, 254
BspANI	GGCC	7 cut(s)	264, 315, 470, 606, 677, 779, 798
BspCNI	CTCAG	4 cut(s)	152, 367, 440, 794
BspFNI	CGCG	1 cut(s)	540
BspLI	GGNNCC	5 cut(s)	68, 298, 436, 525, 571
BspMI	ACCTGC	3 cut(s)	310, 381, 466
BspPI	GGATC	1 cut(s)	766
BspT107I	GGYRCC	4 cut(s)	66, 296, 434, 569
BspTI	CTTAAG	1 cut(s)	584
BspTNI	GGTCTC	3 cut(s)	197, 291, 512
BsrDI	GCAATG	1 cut(s)	417
BssECI	CCNNGG	1 cut(s)	118
BssMI	GATC	3 cut(s)	381, 485, 771
Bst2UI	CCWGG	5 cut(s)	120, 294, 549, 608, 776
Bst4CI	ACNGT	6 cut(s)	37, 54, 226, 310, 442, 564
Bst6I	CTCTTC	2 cut(s)	515, 622
BstAFI	CTTAAG	1 cut(s)	584
BstC8I	GCNNGC	6 cut(s)	104, 317, 367, 399, 538, 853
BstDEI	CTNAG	5 cut(s)	139, 375, 427, 482, 781
BstF5I	GGATG	1 cut(s)	469
BstFNI	CGCG	1 cut(s)	540
BstHHI	GCGC	1 cut(s)	185
BstKTI	GATC	3 cut(s)	384, 488, 774
BstMAI	GTCTC	4 cut(s)	197, 266, 291, 512
BstMBI	GATC	3 cut(s)	381, 485, 771
BstNI	CCWGG	5 cut(s)	120, 294, 549, 608, 776
BstNSI	RCATGY	1 cut(s)	369
BstSCI	CCNGG	6 cut(s)	29, 118, 292, 547, 606, 774
BstSFI	CTRYAG	1 cut(s)	802
BstSLI	GKGCMC	2 cut(s)	69, 301
BstUI	CGCG	1 cut(s)	540
BstV1I	GCAGC	6 cut(s)	59, 160, 242, 544, 677, 860
BstX2I	RGATCY	1 cut(s)	771
BstYI	RGATCY	1 cut(s)	771
BsuRI	GGCC	7 cut(s)	264, 315, 470, 606, 677, 779, 798
BtsCI	GGATG	1 cut(s)	469
BtsIMutI	CAGTG	6 cut(s)	222, 315, 372, 435, 447, 560
BveI	ACCTGC	3 cut(s)	310, 381, 466
Cac8I	GCNNGC	6 cut(s)	104, 317, 367, 399, 538, 853
CfoI	GCGC	1 cut(s)	185
Cfr13I	GGNCC	4 cut(s)	313, 455, 675, 815
CsiI	ACCWGGT	1 cut(s)	292
Csp6I	GTAC	3 cut(s)	448, 479, 498
CviAII	CATG	1 cut(s)	366
CviQI	GTAC	3 cut(s)	448, 479, 498
DdeI	CTNAG	5 cut(s)	139, 375, 427, 482, 781
DpnI	GATC	3 cut(s)	383, 487, 773
DpnII	GATC	3 cut(s)	381, 485, 771
EaeI	YGGCCR	1 cut(s)	468
Eam1104I	CTCTTC	2 cut(s)	515, 622
EarI	CTCTTC	2 cut(s)	515, 622
Ecl136II	GAGCTC	1 cut(s)	212
Eco147I	AGGCCT	1 cut(s)	798
Eco24I	GRGCYC	2 cut(s)	214, 752
Eco31I	GGTCTC	3 cut(s)	197, 291, 512
Eco47I	GGWCC	2 cut(s)	455, 815
Eco53kI	GAGCTC	1 cut(s)	212
Eco57I	CTGAAG	1 cut(s)	198
EcoICRI	GAGCTC	1 cut(s)	212
EcoRII	CCWGG	5 cut(s)	118, 292, 547, 606, 774
EcoT38I	GRGCYC	2 cut(s)	214, 752
Esp3I	CGTCTC	1 cut(s)	266
FaeI	CATG	1 cut(s)	369
FaiI	YATR	7 cut(s)	61, 206, 367, 533, 576, 824, 865
FalI	AAGNNNNNCTT	4 cut(s)	578, 610, 619, 651
FaqI	GGGAC	1 cut(s)	46
FatI	CATG	1 cut(s)	365
FbaI	TGATCA	1 cut(s)	381
FblI	GTMKAC	1 cut(s)	684
Fnu4HI	GCNGC	6 cut(s)	48, 174, 231, 558, 666, 849
FokI	GGATG	1 cut(s)	476
FriOI	GRGCYC	2 cut(s)	214, 752
Fsp4HI	GCNGC	6 cut(s)	48, 174, 231, 558, 666, 849
FspBI	CTAG	2 cut(s)	362, 828
GlaI	GCGC	1 cut(s)	184
GluI	GCNGC	6 cut(s)	48, 174, 231, 558, 666, 849
GsaI	CCCAGC	1 cut(s)	339
GsuI	CTGGAG	4 cut(s)	363, 621, 669, 681
HaeIII	GGCC	7 cut(s)	264, 315, 470, 606, 677, 779, 798
HapII	CCGG	1 cut(s)	30
HhaI	GCGC	1 cut(s)	185
Hin1II	CATG	1 cut(s)	369
Hin6I	GCGC	1 cut(s)	183
HinP1I	GCGC	1 cut(s)	183
HinfI	GANTC	1 cut(s)	789
HpaII	CCGG	1 cut(s)	30
HphI	GGTGA	1 cut(s)	428
Hpy166II	GTNNAC	1 cut(s)	685
Hpy188I	TCNGA	4 cut(s)	490, 528, 738, 784
Hpy188III	TCNNGA	1 cut(s)	703
Hpy8I	GTNNAC	1 cut(s)	685
HpyAV	CCTTC	3 cut(s)	173, 244, 485
HpyCH4III	ACNGT	6 cut(s)	37, 54, 226, 310, 442, 564
HpyCH4IV	ACGT	1 cut(s)	275
HpyCH4V	TGCA	5 cut(s)	390, 397, 410, 560, 848
HpyF3I	CTNAG	5 cut(s)	139, 375, 427, 482, 781
HpySE526I	ACGT	1 cut(s)	275
Hsp92II	CATG	1 cut(s)	369
HspAI	GCGC	1 cut(s)	183
Ksp22I	TGATCA	1 cut(s)	381
Kzo9I	GATC	3 cut(s)	381, 485, 771
LmnI	GCTCC	3 cut(s)	209, 217, 662
Lsp1109I	GCAGC	6 cut(s)	59, 160, 242, 544, 677, 860
LweI	GCATC	2 cut(s)	142, 748
MabI	ACCWGGT	1 cut(s)	292
MaeI	CTAG	2 cut(s)	362, 828
MaeII	ACGT	1 cut(s)	275
MaeIII	GTNAC	1 cut(s)	871
MalI	GATC	3 cut(s)	383, 487, 773
MboI	GATC	3 cut(s)	381, 485, 771
MboII	GAAGA	2 cut(s)	502, 639
MfeI	CAATTG	1 cut(s)	753
MflI	RGATCY	1 cut(s)	771
MhlI	GDGCHC	4 cut(s)	69, 214, 301, 752
MlsI	TGGCCA	1 cut(s)	470
MluCI	AATT	3 cut(s)	639, 711, 753
MluNI	TGGCCA	1 cut(s)	470
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	2 cut(s)	19, 551
Mox20I	TGGCCA	1 cut(s)	470
MscI	TGGCCA	1 cut(s)	470
MseI	TTAA	3 cut(s)	90, 585, 638
Msp20I	TGGCCA	1 cut(s)	470
MspCI	CTTAAG	1 cut(s)	584
MspI	CCGG	1 cut(s)	30
MspR9I	CCNGG	6 cut(s)	31, 120, 294, 549, 608, 776
MunI	CAATTG	1 cut(s)	753
MvaI	CCWGG	5 cut(s)	120, 294, 549, 608, 776
MvnI	CGCG	1 cut(s)	540
NciI	CCSGG	1 cut(s)	31
NdeII	GATC	3 cut(s)	381, 485, 771
NlaIII	CATG	1 cut(s)	369
NlaIV	GGNNCC	5 cut(s)	68, 298, 436, 525, 571
NspI	RCATGY	1 cut(s)	369
PaeI	GCATGC	1 cut(s)	369
PceI	AGGCCT	1 cut(s)	798
PflMI	CCANNNNNTGG	1 cut(s)	119
PkrI	GCNGC	6 cut(s)	49, 175, 232, 559, 667, 850
PleI	GAGTC	1 cut(s)	797
PpsI	GAGTC	1 cut(s)	797
Psp124BI	GAGCTC	1 cut(s)	214
Psp6I	CCWGG	5 cut(s)	118, 292, 547, 606, 774
PspFI	CCCAGC	1 cut(s)	335
PspGI	CCWGG	5 cut(s)	118, 292, 547, 606, 774
PspN4I	GGNNCC	5 cut(s)	68, 298, 436, 525, 571
PspPI	GGNCC	4 cut(s)	313, 455, 675, 815
PsuI	RGATCY	1 cut(s)	771
RsaI	GTAC	3 cut(s)	449, 480, 499
RsaNI	GTAC	3 cut(s)	448, 479, 498
SacI	GAGCTC	1 cut(s)	214
SaqAI	TTAA	3 cut(s)	90, 585, 638
SatI	GCNGC	6 cut(s)	48, 174, 231, 558, 666, 849
Sau3AI	GATC	3 cut(s)	381, 485, 771
Sau96I	GGNCC	4 cut(s)	313, 455, 675, 815
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	6 cut(s)	31, 120, 294, 549, 608, 776
SduI	GDGCHC	4 cut(s)	69, 214, 301, 752
SexAI	ACCWGGT	1 cut(s)	292
SfaNI	GCATC	2 cut(s)	142, 748
SfcI	CTRYAG	1 cut(s)	802
SinI	GGWCC	2 cut(s)	455, 815
SmlI	CTYRAG	1 cut(s)	584
SmoI	CTYRAG	1 cut(s)	584
SphI	GCATGC	1 cut(s)	369
Sse9I	AATT	3 cut(s)	639, 711, 753
SseBI	AGGCCT	1 cut(s)	798
SsiI	CCGC	2 cut(s)	27, 254
SspMI	CTAG	2 cut(s)	362, 828
SstI	GAGCTC	1 cut(s)	214
StuI	AGGCCT	1 cut(s)	798
StyD4I	CCNGG	6 cut(s)	29, 118, 292, 547, 606, 774
TaaI	ACNGT	6 cut(s)	37, 54, 226, 310, 442, 564
TaiI	ACGT	1 cut(s)	278
TaqI	TCGA	1 cut(s)	881
TasI	AATT	3 cut(s)	639, 711, 753
Tru1I	TTAA	3 cut(s)	90, 585, 638
Tru9I	TTAA	3 cut(s)	90, 585, 638
TscAI	CASTG	6 cut(s)	229, 315, 379, 435, 447, 567
TseI	GCWGC	6 cut(s)	47, 173, 230, 557, 665, 848
TspDTI	ATGAA	1 cut(s)	591
TspGWI	ACGGA	1 cut(s)	465
TspRI	CASTG	6 cut(s)	229, 315, 379, 435, 447, 567
Van91I	CCANNNNNTGG	1 cut(s)	119
Vha464I	CTTAAG	1 cut(s)	584
VpaK11BI	GGWCC	2 cut(s)	455, 815
XceI	RCATGY	1 cut(s)	369
XcmI	CCANNNNNNNNNTGG	1 cut(s)	614
XmiI	GTMKAC	1 cut(s)	684
XspI	CTAG	2 cut(s)	362, 828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.