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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57570 AT3G57570 |
| fragaria_vesca | FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_7g07942 FvH4_7g07943 |
| malus_domestica | MD05G1111300.v1.1 |
| prunus_persica | Prupe.8G156400_v2.0.a1 Prupe.8G156400_v2.0.a1 |
| pyrus_communis | pycom05g10710 |
| rosa_chinensis | RchiOBHm_Chr6g0247071 RchiOBHm_Chr7g0177161 |
| rosa_laevigata | RLG00000015224 |
| rosa_multiflora | Rmu_sc0002476.1_g000020 Rmu_sc0004577.1_g000007 Rmu_sc0005310.1_g000018 Rmu_sc0027214.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00214360 |
| rosa_rugosa | Rorug05G0522000.1 |
| rosa_samantha | Rh6AG037100 Rh6BG031800 Rh6CG033000 Rh6CG033100 Rh6DG030800 Rh7AG003700 Rh7CG003400 |
| rosa_wichuraiana | Rw6G003180 Rw7G000300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 862 |
| AccIII | TCCGGA | 1 cut(s) | 1319 |
| AciI | CCGC | 3 cut(s) | 524, 923, 1382 |
| AclWI | GGATC | 3 cut(s) | 33, 1038, 1051 |
| AcoI | YGGCCR | 1 cut(s) | 1423 |
| AcsI | RAATTY | 4 cut(s) | 241, 257, 410, 1529 |
| AcuI | CTGAAG | 4 cut(s) | 672, 696, 972, 1602 |
| AfaI | GTAC | 2 cut(s) | 729, 1007 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 388 |
| AflII | CTTAAG | 1 cut(s) | 119 |
| AgsI | TTSAA | 8 cut(s) | 662, 782, 1033, 1124, 1346, 1507, 1529, 1534 |
| AjiI | CACGTC | 1 cut(s) | 1677 |
| AjnI | CCWGG | 2 cut(s) | 1200, 1714 |
| AluBI | AGCT | 8 cut(s) | 164, 569, 739, 1107, 1278, 1412, 1561, 1605 |
| AluI | AGCT | 8 cut(s) | 164, 569, 739, 1107, 1278, 1412, 1561, 1605 |
| Alw21I | GWGCWC | 4 cut(s) | 930, 1200, 1227, 1563 |
| Alw26I | GTCTC | 6 cut(s) | 344, 430, 494, 603, 1027, 1739 |
| AlwI | GGATC | 3 cut(s) | 33, 1038, 1051 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1211 |
| Aor13HI | TCCGGA | 1 cut(s) | 1319 |
| AoxI | GGCC | 2 cut(s) | 1423, 1760 |
| ApeKI | GCWGC | 4 cut(s) | 526, 1211, 1275, 1622 |
| ApoI | RAATTY | 4 cut(s) | 241, 257, 410, 1529 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1127, 1159 |
| AseI | ATTAAT | 1 cut(s) | 830 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 657, 1446 |
| AspS9I | GGNCC | 1 cut(s) | 286 |
| AsuC2I | CCSGG | 1 cut(s) | 880 |
| AvaII | GGWCC | 1 cut(s) | 286 |
| BalI | TGGCCA | 1 cut(s) | 1425 |
| BamHI | GGATCC | 1 cut(s) | 1043 |
| BanII | GRGCYC | 1 cut(s) | 1563 |
| BbsI | GAAGAC | 2 cut(s) | 201, 702 |
| Bbv12I | GWGCWC | 4 cut(s) | 930, 1200, 1227, 1563 |
| BbvCI | CCTCAGC | 1 cut(s) | 165 |
| BbvI | GCAGC | 4 cut(s) | 513, 1198, 1287, 1609 |
| BccI | CCATC | 6 cut(s) | 332, 548, 1162, 1258, 1481, 1766 |
| BciT130I | CCWGG | 2 cut(s) | 1202, 1716 |
| BcnI | CCSGG | 1 cut(s) | 880 |
| BcoDI | GTCTC | 6 cut(s) | 344, 430, 494, 603, 1027, 1739 |
| BfaI | CTAG | 2 cut(s) | 50, 1284 |
| BfrI | CTTAAG | 1 cut(s) | 119 |
| BfuAI | ACCTGC | 1 cut(s) | 862 |
| BisI | GCNGC | 4 cut(s) | 527, 1212, 1276, 1623 |
| BlsI | GCNGC | 4 cut(s) | 528, 1213, 1277, 1624 |
| Bme1390I | CCNGG | 3 cut(s) | 880, 1202, 1716 |
| Bme18I | GGWCC | 1 cut(s) | 286 |
| BmgBI | CACGTC | 1 cut(s) | 1677 |
| BmgT120I | GGNCC | 1 cut(s) | 286 |
| BmiI | GGNNCC | 2 cut(s) | 1045, 1112 |
| BmrFI | CCNGG | 3 cut(s) | 880, 1202, 1716 |
| BmrI | ACTGGG | 2 cut(s) | 398, 1603 |
| BmsI | GCATC | 3 cut(s) | 502, 901, 1198 |
| BmuI | ACTGGG | 2 cut(s) | 398, 1603 |
| BpiI | GAAGAC | 2 cut(s) | 201, 702 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 158, 190, 433, 465 |
| BpmI | CTGGAG | 1 cut(s) | 522 |
| Bpu10I | CCTNAGC | 2 cut(s) | 165, 1070 |
| BpuMI | CCSGG | 1 cut(s) | 880 |
| BsaAI | YACGTR | 1 cut(s) | 295 |
| BsaI | GGTCTC | 2 cut(s) | 344, 1027 |
| BsaJI | CCNNGG | 1 cut(s) | 879 |
| BsaWI | WCCGGW | 1 cut(s) | 1319 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 388 |
| Bse1I | ACTGG | 6 cut(s) | 196, 393, 505, 816, 906, 1609 |
| Bse3DI | GCAATG | 1 cut(s) | 1358 |
| BseAI | TCCGGA | 1 cut(s) | 1319 |
| BseBI | CCWGG | 2 cut(s) | 1202, 1716 |
| BseDI | CCNNGG | 1 cut(s) | 879 |
| BseGI | GGATG | 9 cut(s) | 343, 444, 517, 889, 1273, 1576, 1711, 1777, 1783 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BseMI | GCAATG | 1 cut(s) | 1358 |
| BseMII | CTCAG | 7 cut(s) | 156, 318, 339, 464, 1376, 1548, 1646 |
| BseNI | ACTGG | 6 cut(s) | 196, 393, 505, 816, 906, 1609 |
| BseXI | GCAGC | 4 cut(s) | 513, 1198, 1287, 1609 |
| BseYI | CCCAGC | 2 cut(s) | 264, 735 |
| BsgI | GTGCAG | 1 cut(s) | 74 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1063 |
| BshFI | GGCC | 2 cut(s) | 1425, 1762 |
| BsiEI | CGRYCG | 1 cut(s) | 1063 |
| BsiHKAI | GWGCWC | 4 cut(s) | 930, 1200, 1227, 1563 |
| BsiSI | CCGG | 2 cut(s) | 879, 1320 |
| BslFI | GGGAC | 1 cut(s) | 1663 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BsmAI | GTCTC | 6 cut(s) | 344, 430, 494, 603, 1027, 1739 |
| BsmFI | GGGAC | 1 cut(s) | 1663 |
| BsnI | GGCC | 2 cut(s) | 1425, 1762 |
| Bso31I | GGTCTC | 2 cut(s) | 344, 1027 |
| Bsp1286I | GDGCHC | 4 cut(s) | 930, 1200, 1227, 1563 |
| Bsp13I | TCCGGA | 1 cut(s) | 1319 |
| Bsp143I | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| BspACI | CCGC | 3 cut(s) | 524, 923, 1382 |
| BspANI | GGCC | 2 cut(s) | 1425, 1762 |
| BspCNI | CTCAG | 7 cut(s) | 157, 319, 340, 463, 1377, 1549, 1645 |
| BspEI | TCCGGA | 1 cut(s) | 1319 |
| BspHI | TCATGA | 1 cut(s) | 1450 |
| BspLI | GGNNCC | 2 cut(s) | 1045, 1112 |
| BspMI | ACCTGC | 1 cut(s) | 862 |
| BspPI | GGATC | 3 cut(s) | 33, 1038, 1051 |
| BspTI | CTTAAG | 1 cut(s) | 119 |
| BspTNI | GGTCTC | 2 cut(s) | 344, 1027 |
| BsrDI | GCAATG | 1 cut(s) | 1358 |
| BsrI | ACTGG | 6 cut(s) | 196, 393, 505, 816, 906, 1609 |
| BssECI | CCNNGG | 1 cut(s) | 879 |
| BssMI | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| Bst2UI | CCWGG | 2 cut(s) | 1202, 1716 |
| Bst4CI | ACNGT | 6 cut(s) | 207, 282, 309, 614, 974, 1457 |
| Bst6I | CTCTTC | 1 cut(s) | 1503 |
| BstAFI | CTTAAG | 1 cut(s) | 119 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1211 |
| BstBAI | YACGTR | 1 cut(s) | 295 |
| BstC8I | GCNNGC | 5 cut(s) | 96, 172, 301, 897, 1245 |
| BstF5I | GGATG | 9 cut(s) | 343, 444, 517, 889, 1273, 1576, 1711, 1777, 1783 |
| BstKTI | GATC | 5 cut(s) | 28, 253, 1046, 1063, 1402 |
| BstMAI | GTCTC | 6 cut(s) | 344, 430, 494, 603, 1027, 1739 |
| BstMBI | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| BstMCI | CGRYCG | 1 cut(s) | 1063 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 81, 526, 603, 745, 911, 920, 1211, 1567, 1759 |
| BstNI | CCWGG | 2 cut(s) | 1202, 1716 |
| BstNSI | RCATGY | 3 cut(s) | 98, 235, 1247 |
| BstSCI | CCNGG | 3 cut(s) | 878, 1200, 1714 |
| BstSNI | TACGTA | 1 cut(s) | 295 |
| BstV1I | GCAGC | 4 cut(s) | 513, 1198, 1287, 1609 |
| BstV2I | GAAGAC | 2 cut(s) | 201, 702 |
| BstX2I | RGATCY | 1 cut(s) | 1043 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 106, 1480 |
| BstYI | RGATCY | 1 cut(s) | 1043 |
| BsuRI | GGCC | 2 cut(s) | 1425, 1762 |
| BtrI | CACGTC | 1 cut(s) | 1677 |
| BtsCI | GGATG | 9 cut(s) | 343, 444, 517, 889, 1273, 1576, 1711, 1777, 1783 |
| BtsIMutI | CAGTG | 5 cut(s) | 492, 498, 623, 913, 1127 |
| BveI | ACCTGC | 1 cut(s) | 862 |
| Cac8I | GCNNGC | 5 cut(s) | 96, 172, 301, 897, 1245 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1211 |
| CciI | TCATGA | 1 cut(s) | 1450 |
| Cfr13I | GGNCC | 1 cut(s) | 286 |
| CseI | GACGC | 2 cut(s) | 629, 801 |
| Csp6I | GTAC | 2 cut(s) | 728, 1006 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 552, 587 |
| CviAII | CATG | 8 cut(s) | 95, 131, 232, 744, 1003, 1244, 1417, 1451 |
| CviQI | GTAC | 2 cut(s) | 728, 1006 |
| DpnI | GATC | 5 cut(s) | 27, 252, 1045, 1062, 1401 |
| DpnII | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| EaeI | YGGCCR | 1 cut(s) | 1423 |
| Eam1104I | CTCTTC | 1 cut(s) | 1503 |
| EarI | CTCTTC | 1 cut(s) | 1503 |
| Ecl136II | GAGCTC | 1 cut(s) | 1561 |
| Eco105I | TACGTA | 1 cut(s) | 295 |
| Eco24I | GRGCYC | 1 cut(s) | 1563 |
| Eco31I | GGTCTC | 2 cut(s) | 344, 1027 |
| Eco32I | GATATC | 2 cut(s) | 447, 1465 |
| Eco47I | GGWCC | 1 cut(s) | 286 |
| Eco53kI | GAGCTC | 1 cut(s) | 1561 |
| Eco57I | CTGAAG | 4 cut(s) | 672, 696, 972, 1602 |
| EcoICRI | GAGCTC | 1 cut(s) | 1561 |
| EcoRI | GAATTC | 1 cut(s) | 1529 |
| EcoRII | CCWGG | 2 cut(s) | 1200, 1714 |
| EcoRV | GATATC | 2 cut(s) | 447, 1465 |
| EcoT22I | ATGCAT | 1 cut(s) | 1245 |
| EcoT38I | GRGCYC | 1 cut(s) | 1563 |
| FaeI | CATG | 8 cut(s) | 98, 134, 235, 747, 1006, 1247, 1420, 1454 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 73, 105 |
| FaqI | GGGAC | 1 cut(s) | 1663 |
| FatI | CATG | 8 cut(s) | 94, 130, 231, 743, 1002, 1243, 1416, 1450 |
| Fnu4HI | GCNGC | 4 cut(s) | 527, 1212, 1276, 1623 |
| FokI | GGATG | 8 cut(s) | 350, 451, 524, 896, 1280, 1563, 1698, 1784 |
| FriOI | GRGCYC | 1 cut(s) | 1563 |
| Fsp4HI | GCNGC | 4 cut(s) | 527, 1212, 1276, 1623 |
| FspBI | CTAG | 2 cut(s) | 50, 1284 |
| GluI | GCNGC | 4 cut(s) | 527, 1212, 1276, 1623 |
| GsaI | CCCAGC | 2 cut(s) | 268, 739 |
| GsuI | CTGGAG | 1 cut(s) | 522 |
| HaeIII | GGCC | 2 cut(s) | 1425, 1762 |
| HapII | CCGG | 2 cut(s) | 879, 1320 |
| HgaI | GACGC | 2 cut(s) | 629, 801 |
| Hin1II | CATG | 8 cut(s) | 98, 134, 235, 747, 1006, 1247, 1420, 1454 |
| HinfI | GANTC | 6 cut(s) | 532, 716, 1316, 1378, 1406, 1484 |
| HpaII | CCGG | 2 cut(s) | 879, 1320 |
| HpyAV | CCTTC | 5 cut(s) | 172, 392, 849, 940, 1773 |
| HpyCH4III | ACNGT | 6 cut(s) | 207, 282, 309, 614, 974, 1457 |
| HpyCH4IV | ACGT | 5 cut(s) | 156, 294, 537, 726, 1676 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 81, 526, 603, 745, 911, 920, 1211, 1567, 1759 |
| HpySE526I | ACGT | 5 cut(s) | 156, 294, 537, 726, 1676 |
| Hsp92II | CATG | 8 cut(s) | 98, 134, 235, 747, 1006, 1247, 1420, 1454 |
| Kpn2I | TCCGGA | 1 cut(s) | 1319 |
| Kzo9I | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| LmnI | GCTCC | 2 cut(s) | 72, 1610 |
| Lsp1109I | GCAGC | 4 cut(s) | 513, 1198, 1287, 1609 |
| LweI | GCATC | 3 cut(s) | 502, 901, 1198 |
| MaeI | CTAG | 2 cut(s) | 50, 1284 |
| MaeII | ACGT | 5 cut(s) | 156, 294, 537, 726, 1676 |
| MaeIII | GTNAC | 3 cut(s) | 152, 1489, 1694 |
| MalI | GATC | 5 cut(s) | 27, 252, 1045, 1062, 1401 |
| MboI | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| MflI | RGATCY | 1 cut(s) | 1043 |
| MhlI | GDGCHC | 4 cut(s) | 930, 1200, 1227, 1563 |
| MlsI | TGGCCA | 1 cut(s) | 1425 |
| MluNI | TGGCCA | 1 cut(s) | 1425 |
| MlyI | GAGTC | 2 cut(s) | 710, 1310 |
| MmeI | TCCRAC | 2 cut(s) | 197, 264 |
| MnlI | CCTC | 7 cut(s) | 28, 160, 435, 499, 1124, 1504, 1685 |
| Mox20I | TGGCCA | 1 cut(s) | 1425 |
| Mph1103I | ATGCAT | 1 cut(s) | 1245 |
| MroI | TCCGGA | 1 cut(s) | 1319 |
| MroXI | GAANNNNTTC | 2 cut(s) | 657, 1446 |
| MscI | TGGCCA | 1 cut(s) | 1425 |
| MslI | CAYNNNNRTG | 4 cut(s) | 236, 962, 1191, 1308 |
| Msp20I | TGGCCA | 1 cut(s) | 1425 |
| MspA1I | CMGCKG | 3 cut(s) | 526, 1384, 1412 |
| MspCI | CTTAAG | 1 cut(s) | 119 |
| MspI | CCGG | 2 cut(s) | 879, 1320 |
| MspR9I | CCNGG | 3 cut(s) | 880, 1202, 1716 |
| MvaI | CCWGG | 2 cut(s) | 1202, 1716 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 81, 526, 603, 745, 911, 920, 1211, 1567, 1759 |
| NciI | CCSGG | 1 cut(s) | 880 |
| NdeII | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| NlaIII | CATG | 8 cut(s) | 98, 134, 235, 747, 1006, 1247, 1420, 1454 |
| NlaIV | GGNNCC | 2 cut(s) | 1045, 1112 |
| NmuCI | GTSAC | 1 cut(s) | 1694 |
| NsiI | ATGCAT | 1 cut(s) | 1245 |
| NspI | RCATGY | 3 cut(s) | 98, 235, 1247 |
| PaeI | GCATGC | 2 cut(s) | 98, 1247 |
| PagI | TCATGA | 1 cut(s) | 1450 |
| PdmI | GAANNNNTTC | 2 cut(s) | 657, 1446 |
| PfeI | GAWTC | 4 cut(s) | 532, 1378, 1406, 1484 |
| PkrI | GCNGC | 4 cut(s) | 528, 1213, 1277, 1624 |
| Ple19I | CGATCG | 1 cut(s) | 1063 |
| PleI | GAGTC | 2 cut(s) | 710, 1310 |
| PpsI | GAGTC | 2 cut(s) | 710, 1310 |
| Ppu21I | YACGTR | 1 cut(s) | 295 |
| PshBI | ATTAAT | 1 cut(s) | 830 |
| Psp124BI | GAGCTC | 1 cut(s) | 1563 |
| Psp6I | CCWGG | 2 cut(s) | 1200, 1714 |
| PspFI | CCCAGC | 2 cut(s) | 264, 735 |
| PspGI | CCWGG | 2 cut(s) | 1200, 1714 |
| PspN4I | GGNNCC | 2 cut(s) | 1045, 1112 |
| PspPI | GGNCC | 1 cut(s) | 286 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1211 |
| PsuI | RGATCY | 1 cut(s) | 1043 |
| PvuI | CGATCG | 1 cut(s) | 1063 |
| PvuII | CAGCTG | 1 cut(s) | 1412 |
| RsaI | GTAC | 2 cut(s) | 729, 1007 |
| RsaNI | GTAC | 2 cut(s) | 728, 1006 |
| RseI | CAYNNNNRTG | 4 cut(s) | 236, 962, 1191, 1308 |
| SacI | GAGCTC | 1 cut(s) | 1563 |
| SatI | GCNGC | 4 cut(s) | 527, 1212, 1276, 1623 |
| Sau3AI | GATC | 5 cut(s) | 25, 250, 1043, 1060, 1399 |
| Sau96I | GGNCC | 1 cut(s) | 286 |
| SchI | GAGTC | 2 cut(s) | 710, 1310 |
| ScrFI | CCNGG | 3 cut(s) | 880, 1202, 1716 |
| SduI | GDGCHC | 4 cut(s) | 930, 1200, 1227, 1563 |
| SfaNI | GCATC | 3 cut(s) | 502, 901, 1198 |
| SinI | GGWCC | 1 cut(s) | 286 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 236, 962, 1191, 1308 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| SnaBI | TACGTA | 1 cut(s) | 295 |
| SphI | GCATGC | 2 cut(s) | 98, 1247 |
| SsiI | CCGC | 3 cut(s) | 524, 923, 1382 |
| SspI | AATATT | 1 cut(s) | 935 |
| SspMI | CTAG | 2 cut(s) | 50, 1284 |
| SstI | GAGCTC | 1 cut(s) | 1563 |
| StyD4I | CCNGG | 3 cut(s) | 878, 1200, 1714 |
| TaaI | ACNGT | 6 cut(s) | 207, 282, 309, 614, 974, 1457 |
| TaiI | ACGT | 5 cut(s) | 159, 297, 540, 729, 1679 |
| TaqI | TCGA | 5 cut(s) | 176, 543, 1063, 1404, 1459 |
| TatI | WGTACW | 1 cut(s) | 1005 |
| TfiI | GAWTC | 4 cut(s) | 532, 1378, 1406, 1484 |
| TscAI | CASTG | 5 cut(s) | 499, 505, 623, 913, 1134 |
| TseFI | GTSAC | 1 cut(s) | 1694 |
| TseI | GCWGC | 4 cut(s) | 526, 1211, 1275, 1622 |
| Tsp45I | GTSAC | 1 cut(s) | 1694 |
| TspRI | CASTG | 5 cut(s) | 499, 505, 623, 913, 1134 |
| Vha464I | CTTAAG | 1 cut(s) | 119 |
| VpaK11BI | GGWCC | 1 cut(s) | 286 |
| VspI | ATTAAT | 1 cut(s) | 830 |
| XapI | RAATTY | 4 cut(s) | 241, 257, 410, 1529 |
| XbaI | TCTAGA | 1 cut(s) | 1283 |
| XceI | RCATGY | 3 cut(s) | 98, 235, 1247 |
| XmnI | GAANNNNTTC | 2 cut(s) | 657, 1446 |
| XspI | CTAG | 2 cut(s) | 50, 1284 |
| Zsp2I | ATGCAT | 1 cut(s) | 1245 |