Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004322

Physical Location & Seq

Genomic Coordinates Forward (+)

5148392 .. 5156599

Gene Structure 8208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G003180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3189 bp

ATGGAACCACAAAGCCACTTCCTACTCCCCCACTCCGCCTCGTCGGAGTTATCAGACTCATCACCGGAGTCCATGACGTCAGTCACTCTCGGCCGAGCAATCTCCTCTCTCTCTCCGCCCGCCCCAAAAAGCTCCACGACGCCGTTTCGCGGCTCCCTCGACGACTCCCTCCGCTTCCTCCTCCACTACCTAAACGACGCCGCTCGGCGAAACGAGCCTCTCGATGAAATTCTCATCCCTTTGCTCGATAACTCATTGAAGAACAAGGACTCGAAGCACGGCGGCCAGGCTATAGTGGTTTTGAACTGGCTATTTCAGGACGGTTTTGTTTTCGAAGCTATTGCCATGGCTCTGGTAAGAGTGATTTCGACGAAGGATGATCGGTTTGTTGTGCTTGGCTGGTGTACTTTTGTACGTGCTGTATTGGAGTATGAGAGCTCTGTTACTCAATTTCCGATGAACGGGATAAAGCAGAGGTATCCTGATTTATTGAAGATACTCGCTTCGTGCATTCCGCATCTCTCAATTGTTCTGCTCAAAGGAAGCACCTTGCAGGATGGATATGAACTGCCCTCTCGCCTTGCCGTGTCTGCTGCTGATTGTTTTCTGTCTCTCTCGGAAGCATTGATCAGAAAAGCTAAAGTTCCAAGTAACAAGCCAAAGTTATCAGATTCAAAGGCACAAAAGCGGCCGGTTACTTTGGTGGCCCTTGATGGTGGTGATAAAAAAGCAAAACCAGCTCCTGAATCTTTAGATGCCTCAAACATGGAATTGGACTTTATACTTTGGGATCATTTAGAGGAAGTTCTTGGTCTAGTACAGAAACTCCTTGCTTGGAGCAGAAAAAGCCGACCCTTACATGCCAAAGGATTGGAGCAAGTGCTTAAGTGGTTGCACGAGATTAAAGGACATTATCGTAACGTGAAAGCTGAGGCAGGCTCGAAGGTTATCAAAACTGGAATATTGCTACTGTCTTCTTGTTGGAAGCATTATGGCATGCTAATGCATTTGGAAGATCAGAAATTTTCCCAGCATTACAAAGAATTGTTGGATCAATACTTAGCAGGCATACAGTTTTATGCAGGTCACACTGAGAATAAGGATGGGAGTTCTGAGACCATAAAGTTTTTCCTGAATTGTTTATGCCTTCTACTGGGGCGATTTGATAGCAAGAAATTTGAGAGCGTAGTCTCAGAATATGGGATGAGGATATCTCAGGTTCTTGTACCACAGCTTCATTCTGCTGCTGATGATGTTATAGACGGGGTTGTGTGCATATTCAAAGCATTAATATTTAAGCAAAAATCCTGGAAGCAGTCTCCGACCGGAGAGGTGGATGCTGTGCTTCCATTGCTGATTCACCTTCTAGATGAACGGGATGGCACAGCTAGAGCTGTGGTTCTGCTTATAGCAGAATACTGCTTGATGAGCAGAGACAGTCAGTGCCTTAAAGAAGTTATTGAGCGCCTTGCTTCTGAAAATGTCCAACAGAGGAGGAATGCAGTTGATGTTATATCAGAAGTCATACATATGTCGTCAGATTCAAAAAACGTACATACCCAGCTATCATGGCACGATATAGCAAAGCACTTGCTTGTGCTACTTGAAGATGGAGAAATTGCAATTCGGGAACAAGCATCCAGTTTGCTTCCATTAATTGACCCTTCATTAGTTTTACCTGCTTTAGTTAATCTGATTTACTCCGGGGATGAAAGATTGCAATCAACTGCCAGTGATGCCTGTGTTGTGGTGCTCAAATATCATAGCGAGAATGCTGAAGGTTCAGGGGGAGGCCATAGATCAAAATTGGAGAGCGATCGAGTGCTTAGGCTAATCCCAGAGTGGTCTAAAAGTGTCCAAAGCTGGAACTTCTTGATTGAACCGTTGATTGACAAGATGTTTGCAGAGCCATCCAACGCAAACATTGTGAGGTTTTTGAGTCATATAAGCGAGCACTTGGCAGAAGCTGCTGATGTGGTGCTCTCTTGTGTTCTAATGCATGCTAAACGACGTAAAGAGATGGATGATAGCAGCTTCTCTAGATTGGAGTGTCAGACTGATAAAAGTGAGGACTCCGAAAAAATGCAACAGACCCTTTTTGAACACCTTTGCCCATTGCTTGTAATTAAGATGCTTCCGCTGAGAGTATTTAATAATCTCGATTCAACTATCATGTATGGTCAACTTTCCAATCAAGGCATTGTTCATGTTTTAACCTTGTATCTGCCTGCATGGATGTTCTGTGAGTGTTTCTCTTGTAATTTTGAATTCAACGATGTTCGGAAACTAGCTGCTGAGCTCTGTGGGCGTATTCATCCTCAAGTGCTAATTCCAATCATCTGCTCCCAGTTAGAATATGCTGCTGGTTCTCAGGATATAATAAAGATTAAAACTTGTTTGTTTTCAGTTTGCACGTCCCTTGTGGTTAGAGGCCGGGAATCACTTTCTCATCCTGGTATGCTGAAAATTAGAAAAACATTAGAGACAATGCTATTATGGCCTTCTCTGGATGGGGATGAAGTTTCCAGAGCACAGCATGGATGCATCGATTGCATGGCACTAATGGTATGTGCTGAGCTGCAAGATCCAGAATCATCTAACATCGTTGGGACAAAAAAGAATCTTGGTGATGCTGCATTGAGAAACTCTGTCCTCGTGCACGTGATCAACCAACTTACACAAGATAAAGACCTGCCTGTTTCAGAGTCCAACTTGGATGATGTCAAATGCATGAGTGAGGTGCCAGTTCCACTCTCATTTTACCTGTGCATGGCTAATGTTCTCATCAGTGCTTGCCAAAAGATATCAGACTCTGGCAAGAAACCTTTTGCTCGAAGATCTCTTCCACGTCTCATTCGTGCCATTGAGGTGATTACAAAGTCAGAGATCAGAGCTGCATGTACTCAAGTTCTCTTTTCAGCTGTGTACCATCTGAAATCTACAATTCTTCCTTACTCCATGGATCTTCTTAAAGTCTCATTAAAAGCTCTTCAAAAGGGATCAGAGAAGGAAAGGATGGCAGGTGCAAAGCTAATGGGGTCTCTTATGGCTAGTGATGATGCAATCATACAAAGTATATCTGGGGGATTAGTAGAAGCAAGATCTGTACTGTTGAGTATATCTTTGACAGATCCTTCACCTGAATTACGTCAAGTCAGCAAAAAGTTGCTAGCATGCCTAACTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1062

Amino Acids

118.08

Weight (kDa)

6.48

Isoelectric Point (pI)

53.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004322)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57570 AT3G57570
fragaria_vesca	FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_7g07942 FvH4_7g07943
malus_domestica	MD05G1111300.v1.1
prunus_persica	Prupe.8G156400_v2.0.a1 Prupe.8G156400_v2.0.a1
pyrus_communis	pycom05g10710
rosa_chinensis	RchiOBHm_Chr6g0247071 RchiOBHm_Chr7g0177161
rosa_laevigata	RLG00000015224
rosa_multiflora	Rmu_sc0002476.1_g000020 Rmu_sc0004577.1_g000007 Rmu_sc0005310.1_g000018 Rmu_sc0027214.1_g000001
rosa_roxburghii	Rroxscaffold_7G00214360
rosa_rugosa	Rorug05G0522000.1
rosa_samantha	Rh6AG037100 Rh6BG031800 Rh6CG033000 Rh6CG033100 Rh6DG030800 Rh7AG003700 Rh7CG003400
rosa_wichuraiana	Rw6G003180 Rw7G000300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3011
AatII	GACGTC	1 cut(s)	80
Acc36I	ACCTGC	4 cut(s)	1073, 1687, 2700, 3011
AccB1I	GGYRCC	1 cut(s)	2740
AccBSI	CCGCTC	1 cut(s)	203
AccII	CGCG	1 cut(s)	150
AclWI	GGATC	6 cut(s)	798, 1059, 2579, 2970, 3007, 3125
AcoI	YGGCCR	3 cut(s)	91, 283, 689
AcsI	RAATTY	4 cut(s)	228, 1022, 1175, 2267
AcuI	CTGAAG	1 cut(s)	1797
AcvI	CACGTG	1 cut(s)	2662
AcyI	GRCGYC	3 cut(s)	77, 140, 198
AfaI	GTAC	8 cut(s)	406, 414, 819, 1227, 1554, 2902, 2927, 3108
AfiI	CCNNNNNNNGG	4 cut(s)	149, 461, 1153, 2770
AflII	CTTAAG	1 cut(s)	884
AjiI	CACGTC	2 cut(s)	2415, 2849
AjnI	CCWGG	3 cut(s)	285, 1307, 2452
Alw21I	GWGCWC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
Alw26I	GTCTC	9 cut(s)	615, 1109, 1195, 1323, 1428, 2477, 2855, 2980, 3045
Alw44I	GTGCAC	1 cut(s)	2657
AlwI	GGATC	6 cut(s)	798, 1059, 2579, 2970, 3007, 3125
AlwNI	CAGNNNCTG	3 cut(s)	743, 1967, 2813
AoxI	GGCC	7 cut(s)	91, 283, 689, 705, 1792, 2431, 2498
ApaLI	GTGCAC	1 cut(s)	2657
ApeKI	GCWGC	9 cut(s)	593, 1244, 1967, 2031, 2291, 2360, 2578, 2633, 2894
ApoI	RAATTY	4 cut(s)	228, 1022, 1175, 2267
ArsI	GACNNNNNNTTYG	2 cut(s)	1883, 1915
AseI	ATTAAT	2 cut(s)	1289, 1655
AspLEI	GCGC	1 cut(s)	1467
AspS9I	GGNCC	1 cut(s)	706
AsuC2I	CCSGG	2 cut(s)	1705, 2435
AsuHPI	GGTGA	6 cut(s)	54, 731, 1352, 2639, 2881, 3129
AsuII	TTCGAA	1 cut(s)	333
AsuNHI	GCTAGC	1 cut(s)	3169
BaeGI	GKGCMC	1 cut(s)	2661
BanI	GGYRCC	1 cut(s)	2740
BanII	GRGCYC	2 cut(s)	440, 2301
BarI	GAAGNNNNNNTAC	2 cut(s)	1218, 1250
BauI	CACGAG	2 cut(s)	896, 2654
BbrPI	CACGTG	1 cut(s)	2662
BbsI	GAAGAC	1 cut(s)	966
Bbv12I	GWGCWC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
BbvCI	CCTCAGC	1 cut(s)	930
BbvI	GCAGC	9 cut(s)	580, 1231, 1954, 2043, 2278, 2347, 2565, 2620, 2881
BceAI	ACGGC	3 cut(s)	127, 295, 569
BcgI	CGANNNNNNTGC	2 cut(s)	323, 357
BciT130I	CCWGG	3 cut(s)	287, 1309, 2454
BciVI	GTATCC	1 cut(s)	489
BclI	TGATCA	2 cut(s)	627, 2664
BcnI	CCSGG	2 cut(s)	1705, 2435
BcoDI	GTCTC	9 cut(s)	615, 1109, 1195, 1323, 1428, 2477, 2855, 2980, 3045
BfaI	CTAG	7 cut(s)	815, 1367, 1389, 2040, 2288, 3051, 3170
BfmI	CTRYAG	1 cut(s)	291
BfoI	RGCGCY	1 cut(s)	1468
BfrI	CTTAAG	1 cut(s)	884
BfuAI	ACCTGC	4 cut(s)	1073, 1687, 2700, 3011
BfuI	GTATCC	1 cut(s)	489
BglII	AGATCT	2 cut(s)	2837, 3101
BlpI	GCTNAGC	2 cut(s)	2295, 2574
Bme1390I	CCNGG	5 cut(s)	287, 1309, 1705, 2435, 2454
BmgBI	CACGTC	2 cut(s)	2415, 2849
BmgT120I	GGNCC	1 cut(s)	706
BmiI	GGNNCC	3 cut(s)	6, 154, 2742
BmrFI	CCNGG	5 cut(s)	287, 1309, 1705, 2435, 2454
BmrI	ACTGGG	2 cut(s)	1163, 2341
BmtI	GCTAGC	1 cut(s)	3173
BmuI	ACTGGG	2 cut(s)	1163, 2341
BoxI	GACNNNNGTC	1 cut(s)	80
BpiI	GAAGAC	1 cut(s)	966
BplI	GAGNNNNNCTC	6 cut(s)	923, 955, 1198, 1230, 2237, 2269
Bpu10I	CCTNAGC	2 cut(s)	930, 1826
Bpu1102I	GCTNAGC	2 cut(s)	2295, 2574
Bpu14I	TTCGAA	1 cut(s)	333
BpuEI	CTTGAG	2 cut(s)	2304, 2889
BpuMI	CCSGG	2 cut(s)	1705, 2435
Bsa29I	ATCGAT	1 cut(s)	2547
BsaAI	YACGTR	2 cut(s)	416, 2662
BsaBI	GATNNNNATC	1 cut(s)	1720
BsaHI	GRCGYC	3 cut(s)	77, 140, 198
BsaI	GGTCTC	2 cut(s)	1109, 3045
BsaJI	CCNNGG	3 cut(s)	345, 1704, 2958
BsaWI	WCCGGW	2 cut(s)	64, 1325
BsaXI	ACNNNNNCTCC	2 cut(s)	810, 840
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 461, 1153, 2770
Bse118I	RCCGGY	1 cut(s)	691
Bse1I	ACTGG	7 cut(s)	311, 961, 1158, 1641, 1731, 2347, 2744
Bse3DI	GCAATG	2 cut(s)	1349, 2114
Bse8I	GATNNNNATC	1 cut(s)	1720
BseBI	CCWGG	3 cut(s)	287, 1309, 2454
BseCI	ATCGAT	1 cut(s)	2547
BseDI	CCNNGG	3 cut(s)	345, 1704, 2958
BseJI	GATNNNNATC	1 cut(s)	1720
BseLI	CCNNNNNNNGG	4 cut(s)	149, 461, 1153, 2770
BseMI	GCAATG	2 cut(s)	1349, 2114
BseMII	CTCAG	9 cut(s)	921, 1083, 1104, 1206, 1229, 2132, 2286, 2384, 2565
BseNI	ACTGG	7 cut(s)	311, 961, 1158, 1641, 1731, 2347, 2744
BseRI	GAGGAG	3 cut(s)	94, 170, 1507
BseSI	GKGCMC	1 cut(s)	2661
BseX3I	CGGCCG	2 cut(s)	91, 689
BseXI	GCAGC	9 cut(s)	580, 1231, 1954, 2043, 2278, 2347, 2565, 2620, 2881
BseYI	CCCAGC	2 cut(s)	1029, 1560
Bsh1236I	CGCG	1 cut(s)	150
Bsh1285I	CGRYCG	4 cut(s)	94, 692, 1326, 1819
BshFI	GGCC	7 cut(s)	93, 285, 691, 707, 1794, 2433, 2500
BshNI	GGYRCC	1 cut(s)	2740
BshVI	ATCGAT	1 cut(s)	2547
BsiEI	CGRYCG	4 cut(s)	94, 692, 1326, 1819
BsiHKAI	GWGCWC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
BsiSI	CCGG	5 cut(s)	65, 692, 1326, 1704, 2434
BslFI	GGGAC	2 cut(s)	2401, 2623
BslI	CCNNNNNNNGG	4 cut(s)	149, 461, 1153, 2770
BsmAI	GTCTC	9 cut(s)	615, 1109, 1195, 1323, 1428, 2477, 2855, 2980, 3045
BsmBI	CGTCTC	1 cut(s)	2855
BsmFI	GGGAC	2 cut(s)	2401, 2623
BsmI	GAATGC	3 cut(s)	510, 1504, 1777
BsnI	GGCC	7 cut(s)	93, 285, 691, 707, 1794, 2433, 2500
Bso31I	GGTCTC	2 cut(s)	1109, 3045
Bsp119I	TTCGAA	1 cut(s)	333
Bsp1286I	GDGCHC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
Bsp1720I	GCTNAGC	2 cut(s)	2295, 2574
Bsp19I	CCATGG	2 cut(s)	345, 2958
BspANI	GGCC	7 cut(s)	93, 285, 691, 707, 1794, 2433, 2500
BspCNI	CTCAG	9 cut(s)	922, 1084, 1105, 1205, 1228, 2133, 2287, 2383, 2566
BspDI	ATCGAT	1 cut(s)	2547
BspFNI	CGCG	1 cut(s)	150
BspLI	GGNNCC	3 cut(s)	6, 154, 2742
BspMI	ACCTGC	4 cut(s)	1073, 1687, 2700, 3011
BspOI	GCTAGC	1 cut(s)	3173
BspPI	GGATC	6 cut(s)	798, 1059, 2579, 2970, 3007, 3125
BspQI	GCTCTTC	1 cut(s)	2994
BspT104I	TTCGAA	1 cut(s)	333
BspT107I	GGYRCC	1 cut(s)	2740
BspTI	CTTAAG	1 cut(s)	884
BspTNI	GGTCTC	2 cut(s)	1109, 3045
BsrBI	CCGCTC	1 cut(s)	203
BsrDI	GCAATG	2 cut(s)	1349, 2114
BsrFI	RCCGGY	1 cut(s)	691
BsrI	ACTGG	7 cut(s)	311, 961, 1158, 1641, 1731, 2347, 2744
BssAI	RCCGGY	1 cut(s)	691
BssECI	CCNNGG	3 cut(s)	345, 1704, 2958
BssNI	GRCGYC	3 cut(s)	77, 140, 198
BssSI	CACGAG	2 cut(s)	896, 2654
BssT1I	CCWWGG	2 cut(s)	345, 2958
Bst2BI	CACGAG	2 cut(s)	896, 2654
Bst2UI	CCWGG	3 cut(s)	287, 1309, 2454
Bst4CI	ACNGT	6 cut(s)	323, 972, 1074, 1439, 1884, 3111
Bst6I	CTCTTC	2 cut(s)	2847, 2994
BstACI	GRCGYC	3 cut(s)	77, 140, 198
BstAFI	CTTAAG	1 cut(s)	884
BstAPI	GCANNNNNTGC	2 cut(s)	1967, 2550
BstBAI	YACGTR	2 cut(s)	416, 2662
BstBI	TTCGAA	1 cut(s)	333
BstDSI	CCRYGG	2 cut(s)	345, 2958
BstFNI	CGCG	1 cut(s)	150
BstH2I	RGCGCY	1 cut(s)	1468
BstHHI	GCGC	1 cut(s)	1467
BstMAI	GTCTC	9 cut(s)	615, 1109, 1195, 1323, 1428, 2477, 2855, 2980, 3045
BstMCI	CGRYCG	4 cut(s)	94, 692, 1326, 1819
BstNI	CCWGG	3 cut(s)	287, 1309, 2454
BstNSI	RCATGY	5 cut(s)	863, 1000, 2003, 2901, 3177
BstPAI	GACNNNNGTC	1 cut(s)	80
BstSCI	CCNGG	5 cut(s)	285, 1307, 1703, 2433, 2452
BstSFI	CTRYAG	1 cut(s)	291
BstSLI	GKGCMC	1 cut(s)	2661
BstUI	CGCG	1 cut(s)	150
BstV1I	GCAGC	9 cut(s)	580, 1231, 1954, 2043, 2278, 2347, 2565, 2620, 2881
BstV2I	GAAGAC	1 cut(s)	966
BstX2I	RGATCY	5 cut(s)	2584, 2837, 2962, 3101, 3130
BstXI	CCANNNNNNTGG	2 cut(s)	352, 871
BstYI	RGATCY	5 cut(s)	2584, 2837, 2962, 3101, 3130
BstZI	CGGCCG	2 cut(s)	91, 689
Bsu15I	ATCGAT	1 cut(s)	2547
BsuI	GTATCC	1 cut(s)	489
BsuRI	GGCC	7 cut(s)	93, 285, 691, 707, 1794, 2433, 2500
BsuTUI	ATCGAT	1 cut(s)	2547
BtgI	CCRYGG	2 cut(s)	345, 2958
BtrI	CACGTC	2 cut(s)	2415, 2849
BtsIMutI	CAGTG	4 cut(s)	1089, 1448, 1738, 2794
BveI	ACCTGC	4 cut(s)	1073, 1687, 2700, 3011
CaiI	CAGNNNCTG	3 cut(s)	743, 1967, 2813
CfoI	GCGC	1 cut(s)	1467
Cfr10I	RCCGGY	1 cut(s)	691
Cfr13I	GGNCC	1 cut(s)	706
ClaI	ATCGAT	1 cut(s)	2547
CseI	GACGC	2 cut(s)	148, 206
Csp6I	GTAC	8 cut(s)	405, 413, 818, 1226, 1553, 2901, 2926, 3107
CviQI	GTAC	8 cut(s)	405, 413, 818, 1226, 1553, 2901, 2926, 3107
EaeI	YGGCCR	3 cut(s)	91, 283, 689
EagI	CGGCCG	2 cut(s)	91, 689
Eam1104I	CTCTTC	2 cut(s)	2847, 2994
EarI	CTCTTC	2 cut(s)	2847, 2994
EciI	GGCGGA	2 cut(s)	25, 105
Ecl136II	GAGCTC	2 cut(s)	438, 2299
EclXI	CGGCCG	2 cut(s)	91, 689
Eco130I	CCWWGG	2 cut(s)	345, 2958
Eco24I	GRGCYC	2 cut(s)	440, 2301
Eco31I	GGTCTC	2 cut(s)	1109, 3045
Eco32I	GATATC	2 cut(s)	1212, 2805
Eco52I	CGGCCG	2 cut(s)	91, 689
Eco53kI	GAGCTC	2 cut(s)	438, 2299
Eco57I	CTGAAG	1 cut(s)	1797
Eco72I	CACGTG	1 cut(s)	2662
EcoICRI	GAGCTC	2 cut(s)	438, 2299
EcoRI	GAATTC	1 cut(s)	2267
EcoRII	CCWGG	3 cut(s)	285, 1307, 2452
EcoRV	GATATC	2 cut(s)	1212, 2805
EcoT14I	CCWWGG	2 cut(s)	345, 2958
EcoT22I	ATGCAT	4 cut(s)	1008, 2001, 2546, 2732
EcoT38I	GRGCYC	2 cut(s)	440, 2301
ErhI	CCWWGG	2 cut(s)	345, 2958
Esp3I	CGTCTC	1 cut(s)	2855
FaqI	GGGAC	2 cut(s)	2401, 2623
FauI	CCCGC	1 cut(s)	127
FauNDI	CATATG	1 cut(s)	1530
FbaI	TGATCA	2 cut(s)	627, 2664
FriOI	GRGCYC	2 cut(s)	440, 2301
FspBI	CTAG	7 cut(s)	815, 1367, 1389, 2040, 2288, 3051, 3170
GlaI	GCGC	1 cut(s)	1466
GsaI	CCCAGC	2 cut(s)	1033, 1564
HaeII	RGCGCY	1 cut(s)	1468
HaeIII	GGCC	7 cut(s)	93, 285, 691, 707, 1794, 2433, 2500
HapII	CCGG	5 cut(s)	65, 692, 1326, 1704, 2434
HgaI	GACGC	2 cut(s)	148, 206
HhaI	GCGC	1 cut(s)	1467
Hin1I	GRCGYC	3 cut(s)	77, 140, 198
Hin6I	GCGC	1 cut(s)	1465
HinP1I	GCGC	1 cut(s)	1465
HincII	GTYRAC	1 cut(s)	2183
HindII	GTYRAC	1 cut(s)	2183
HpaII	CCGG	5 cut(s)	65, 692, 1326, 1704, 2434
HphI	GGTGA	6 cut(s)	54, 731, 1352, 2639, 2881, 3129
Hpy166II	GTNNAC	4 cut(s)	405, 2183, 2659, 2926
Hpy8I	GTNNAC	4 cut(s)	405, 2183, 2659, 2926
Hpy99I	CGWCG	6 cut(s)	46, 142, 164, 200, 373, 2013
HpyAV	CCTTC	9 cut(s)	367, 937, 1157, 1373, 1674, 1772, 2511, 3001, 3144
HpyCH4III	ACNGT	6 cut(s)	323, 972, 1074, 1439, 1884, 3111
HpyCH4IV	ACGT	9 cut(s)	77, 415, 921, 1551, 2011, 2414, 2661, 2848, 3148
HpySE526I	ACGT	9 cut(s)	77, 415, 921, 1551, 2011, 2414, 2661, 2848, 3148
Hsp92I	GRCGYC	3 cut(s)	77, 140, 198
HspAI	GCGC	1 cut(s)	1465
Ksp22I	TGATCA	2 cut(s)	627, 2664
LguI	GCTCTTC	1 cut(s)	2994
LmnI	GCTCC	6 cut(s)	137, 158, 745, 837, 874, 2348
Lsp1109I	GCAGC	9 cut(s)	580, 1231, 1954, 2043, 2278, 2347, 2565, 2620, 2881
MaeI	CTAG	7 cut(s)	815, 1367, 1389, 2040, 2288, 3051, 3170
MaeII	ACGT	9 cut(s)	77, 415, 921, 1551, 2011, 2414, 2661, 2848, 3148
MaeIII	GTNAC	6 cut(s)	82, 442, 650, 694, 917, 1085
MbiI	CCGCTC	1 cut(s)	203
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	5 cut(s)	2584, 2837, 2962, 3101, 3130
MhlI	GDGCHC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
MlyI	GAGTC	8 cut(s)	50, 77, 158, 263, 1948, 2066, 2714, 2804
MmeI	TCCRAC	7 cut(s)	24, 962, 1029, 1346, 1510, 1938, 2733
Mph1103I	ATGCAT	4 cut(s)	1008, 2001, 2546, 2732
MslI	CAYNNNNRTG	3 cut(s)	1001, 1529, 2867
MspA1I	CMGCKG	2 cut(s)	2140, 2921
MspCI	CTTAAG	1 cut(s)	884
MspI	CCGG	5 cut(s)	65, 692, 1326, 1704, 2434
MspR9I	CCNGG	5 cut(s)	287, 1309, 1705, 2435, 2454
MunI	CAATTG	1 cut(s)	525
Mva1269I	GAATGC	3 cut(s)	510, 1504, 1777
MvaI	CCWGG	3 cut(s)	287, 1309, 2454
MvnI	CGCG	1 cut(s)	150
NciI	CCSGG	2 cut(s)	1705, 2435
NcoI	CCATGG	2 cut(s)	345, 2958
NdeI	CATATG	1 cut(s)	1530
NheI	GCTAGC	1 cut(s)	3169
NlaIV	GGNNCC	3 cut(s)	6, 154, 2742
NmeAIII	GCCGAG	3 cut(s)	69, 119, 184
NmuCI	GTSAC	2 cut(s)	82, 1085
NsiI	ATGCAT	4 cut(s)	1008, 2001, 2546, 2732
NspI	RCATGY	5 cut(s)	863, 1000, 2003, 2901, 3177
NspV	TTCGAA	1 cut(s)	333
PaeI	GCATGC	3 cut(s)	1000, 2003, 3177
PaqCI	CACCTGC	1 cut(s)	3011
PciSI	GCTCTTC	1 cut(s)	2994
PcsI	WCGNNNNNNNCGW	2 cut(s)	219, 2854
PctI	GAATGC	3 cut(s)	510, 1504, 1777
PfeI	GAWTC	8 cut(s)	671, 746, 1357, 1541, 2162, 2438, 2591, 2620
PfoI	TCCNGGA	1 cut(s)	1307
Ple19I	CGATCG	1 cut(s)	1819
PleI	GAGTC	8 cut(s)	50, 76, 158, 263, 1947, 2066, 2713, 2804
PmaCI	CACGTG	1 cut(s)	2662
PmlI	CACGTG	1 cut(s)	2662
PpsI	GAGTC	8 cut(s)	50, 76, 158, 263, 1947, 2066, 2713, 2804
Ppu21I	YACGTR	2 cut(s)	416, 2662
PshAI	GACNNNNGTC	1 cut(s)	80
PshBI	ATTAAT	2 cut(s)	1289, 1655
Psp124BI	GAGCTC	2 cut(s)	440, 2301
Psp6I	CCWGG	3 cut(s)	285, 1307, 2452
PspCI	CACGTG	1 cut(s)	2662
PspFI	CCCAGC	2 cut(s)	1029, 1560
PspGI	CCWGG	3 cut(s)	285, 1307, 2452
PspN4I	GGNNCC	3 cut(s)	6, 154, 2742
PspPI	GGNCC	1 cut(s)	706
PstNI	CAGNNNCTG	3 cut(s)	743, 1967, 2813
PsuI	RGATCY	5 cut(s)	2584, 2837, 2962, 3101, 3130
PvuI	CGATCG	1 cut(s)	1819
PvuII	CAGCTG	1 cut(s)	2921
RsaI	GTAC	8 cut(s)	406, 414, 819, 1227, 1554, 2902, 2927, 3108
RsaNI	GTAC	8 cut(s)	405, 413, 818, 1226, 1553, 2901, 2926, 3107
RseI	CAYNNNNRTG	3 cut(s)	1001, 1529, 2867
SacI	GAGCTC	2 cut(s)	440, 2301
SapI	GCTCTTC	1 cut(s)	2994
Sau96I	GGNCC	1 cut(s)	706
SchI	GAGTC	8 cut(s)	50, 77, 158, 263, 1948, 2066, 2714, 2804
ScrFI	CCNGG	5 cut(s)	287, 1309, 1705, 2435, 2454
SduI	GDGCHC	7 cut(s)	440, 1755, 1956, 1983, 2301, 2533, 2661
SfcI	CTRYAG	1 cut(s)	291
SfuI	TTCGAA	1 cut(s)	333
SmiMI	CAYNNNNRTG	3 cut(s)	1001, 1529, 2867
SmlI	CTYRAG	3 cut(s)	884, 2319, 2904
SmoI	CTYRAG	3 cut(s)	884, 2319, 2904
SphI	GCATGC	3 cut(s)	1000, 2003, 3177
SspI	AATATT	2 cut(s)	963, 1293
SspMI	CTAG	7 cut(s)	815, 1367, 1389, 2040, 2288, 3051, 3170
SstI	GAGCTC	2 cut(s)	440, 2301
StyD4I	CCNGG	5 cut(s)	285, 1307, 1703, 2433, 2452
StyI	CCWWGG	2 cut(s)	345, 2958
TaaI	ACNGT	6 cut(s)	323, 972, 1074, 1439, 1884, 3111
TaiI	ACGT	9 cut(s)	80, 418, 924, 1554, 2014, 2417, 2664, 2851, 3151
TatI	WGTACW	4 cut(s)	404, 817, 2900, 3106
TauI	GCSGC	4 cut(s)	153, 203, 285, 691
TfiI	GAWTC	8 cut(s)	671, 746, 1357, 1541, 2162, 2438, 2591, 2620
TscAI	CASTG	4 cut(s)	1096, 1448, 1738, 2794
TseFI	GTSAC	2 cut(s)	82, 1085
TseI	GCWGC	9 cut(s)	593, 1244, 1967, 2031, 2291, 2360, 2578, 2633, 2894
Tsp45I	GTSAC	2 cut(s)	82, 1085
TspRI	CASTG	4 cut(s)	1096, 1448, 1738, 2794
Vha464I	CTTAAG	1 cut(s)	884
VneI	GTGCAC	1 cut(s)	2657
VspI	ATTAAT	2 cut(s)	1289, 1655
XapI	RAATTY	4 cut(s)	228, 1022, 1175, 2267
XbaI	TCTAGA	2 cut(s)	1366, 2039
XceI	RCATGY	5 cut(s)	863, 1000, 2003, 2901, 3177
XspI	CTAG	7 cut(s)	815, 1367, 1389, 2040, 2288, 3051, 3170
ZraI	GACGTC	1 cut(s)	78
Zsp2I	ATGCAT	4 cut(s)	1008, 2001, 2546, 2732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.