Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0004322

Physical Location & Seq

Genomic Coordinates Forward (+)

5048815 .. 5057085

Gene Structure 8271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG037100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3300 bp

ATGGAACCACAAAGCCACTTCCTACTCCCCCACTCCGCCTCGTTGGAGTTATCAGACTCATCACCGGAGTCCATGACGTCAGTCACTCTCGGCCGAGCAATCTCCTCTCTTCTCTCCGCCCGCCCCAAAAAGCTCCACGACGCCGTTTCGCGGCTCTCTCCTCTCCCTCTCACCTCCACCGGCCCCGCCTCCGTCTCAGGCTCCCTCGACGACTCCCTTCGCTTCCTCCTCCACTACCTAAACGACGCCGCTCGGCGAAACGAGCCTCTCGATGAAATCCTCATCCCTATGCTGGATAACTTATTGAAGAACAAGGACTCGAAGCACGGCGGCCAGGCTATGGTGGTTTTGAACTGGCTATTTCAGGACGGTTTTGTTTTCGAAGCTATTGCCATGGCTCTGGTAAGAGTGATTTCGACGAAGGATGATCGGTTTGTTGTGCTTGGCTGGTGTACTTTTGTACGTGCTGTATTGGAGTATGGCTCTGTTACTCAATTTCCGATGAATGGGGTAAAGGAGAGGTATCCGGATTTATTGAAGATACTCACTTCGTGCATTCCGCATCTCTCAATTGTTCTGCACAAAGGAAGCACTTTGCAGGATGGATATGAACTGCCTTCTCGCCTTGCCGTGTCTGCTACTGATTGTTTTCTGGCTCTCTCGGAAGCATTGATCAGAAAAGCTAAAGTTCCAAGTAACAAGCCAAAGTTATCAGATTCAAAGGCACAAAAGCGGCCGGTTACTTTGGTGGCCCTTGATGGTGGTGATAAAAAAGCAAAACCAGCTCCTGAATCTTTAGACGCCTCAAACATGGAATTGGACTATATACTTTGGGATCATTTAGAGGAAGTTTTTGGTCTAGTACAGAAACTCCTTGCTTGGAGCAGAAAAAGCCGACCCTTACATGCTAAAGGATTGGAGCAAGTGCTTAAGTGGTTGCACGAGATTAAAGGACATTATCGTAACGTGAAAGCTGAGGCAGGCTCGAAGGTTATCAAAACTAGAATATTGCTACTGTCTTCTTGTTGGAAGCATTATGGCATGCTAATGCATTTGGAAGATCAGAAATTTTCCCAGCATTACAAAGAATTGTTGGATCAATACTTAGCAGGCATACAGTTTTATGCAGGTCACACTGAGAATAAGGATGGGAGTTCTGAGACCATAAAGTTTTTCCTGAATTGTTTATGCCTTCTACTGGGGCGATTTGATAGCAAGAAATTTGAGAGCGTAGTCTCAGAATACGGGATGAGGATATCTCAGGTTCTTGTACCACAGCTTCATTCTGCTGCTGATGATGTTATAGACGGGGTTGTGTGCATATTCAAAGCATTAATATTTAAGCAAAAATCACCTGGAAGCAGTCTCACCGACACCGGAGAGGTGGATGCTGTGCTTCCATTGCTGATTCACCTTCTAGATGAACGGGATGGCACAGCTAGAGCTGTGGTTCTGCTTATAGCAGAATACTGCTTGATGAGCAGAGACAGTCAGTGCCTTAAAGAAGTTATTGAGCGCCTTGCTTCTGAAAATGTCCAACAGAGGAGGAATGCAGTTGATGTTATATCAGAAGTCATACGTATGTCGTCAGATTCAAAATACGTACATACCCAGCTATCATGGCACGATATAGCAAAGCACTTGATTGTGCTACTTGAAGATGAAGAAACTGCAATTCAGGAACAAGCATCCAGTTTGCTTCCATTAATTGACCCTTCATTAGTTTTACCTGCTTTAGTTAATCTGATTTACTCCGGGTATGAAAGATTGCAATCAACTGCCAGTGATGCCTGTGTTGTGGTGCTCAAATATCATAGTGAGAATGCTGAAGTTATATGTATGCTGCTTGACTGTCTTAGCAACCTCAGCCAAAATGTAAATCAAGACACAGGATCAAAATTGGAGAGCGATCGAGTGCTTAGGCTAATCCCAGAGTGGTCTAAAAGTGTCCAAAGCTGGAACTTCTTGATTGAACCGTTGATTGACAAGATGTTTGCAGAGCCATCCAACGCAAACATTGTGAGGTTTTTGAGTCATATAAGTGAGCACTTGGCAGAAGCTGCTGATGTGGTGCTCTCTTGTGTTCTAATGCATGCTAAACGACGTAAAGAGATGGATGATAGCAGCTTCTCTAGATTGGAGTGTCAGACTGATAAAAGTGAGGACTCCGAAAAAATGCAACAGACCCTTTTTGAACACCTTTGCCCATTGCTTGTAATTAAGATGCTTCCGCTGAGAGTATTTAATAATCTCGATTCAACTATCATGTATGGTCAACTTTCCAATCAAGGCATTGTTCATGACTGTCAAGATATCAATGCCATCAATCAGGATACAGTTACTGCTCTTCTTTTGAAAAGGACATTTTGTGAGTTTGAATTCAACGATGTTCGGAAACTTGCTGCTGAGCTCTGTGGGCGTATTCATCCTCAAGTGCTAATTCCAATCATCTGCTCCCAGTTAGAATATGCTGCTGGTTCTCAGGATATAATAAAGATTAAAGCTTGTTTGTTTTCAGTTTGCACGTCCCTTGTGGTTAGAGGCCGGGAATCACTTTCTCATCCTGGTATGCTGAAAATTAGAAAAATATTAGAGACAATGCTATTATGGCCTTCTCTGGATGGGGATGAAGTTTCCAGAGCACAGCATGGATGCATCGATTGCATGGCACTAATGGTATGTGCTGAGCTGCAAGATCCAGAATCATCTAACATTGTTGGGACAAGAAAGAATCTTGGTGATGCTGCATTGAGAAACTCCGTCCTCGTGCACGTGATCAACCAACTTACACAAGATAAAGACCTGCCTGTTTCAGAGTCCAACTCAGATGATGTCAAATGCATGAGTGAGGTGCCAGTTCCACTCTCATTTTACCTGTGCATGGCTAATGTTCTCATCAGTGCTTGCCAAAAGATATCAGACTCTGGCAAGAAACCTTTTGCTCGAAGATCTCTTCCACGTCTCATTCGCGCCATTGAGGTGATTACAAAGTCAGAGATCAGAGCTGCATGCACTCAAGTTCTCTTTTCAGCTGTGTACCATCTGAAATCTACAATTCTTCCTTACTCCATGGATCTTCTTAATGTCTCATTAAAAGCTCTTCAAAAGGGATCAGAGAAGGAAAGGATGGCAGGTGCAAAGCTAATGGGGTCTCTTATGGCTAGTGATGATGCAATCATACAAAGTATATCTGGGGGATTAGTAGAAGCAAGATCTGTACTGTTGAGTATATCTTTGACAGATCCTTCACCTGAATTACGTCAAGTCAGCAAAAAGTTGCTAGCATGCCTAACTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1099

Amino Acids

122.21

Weight (kDa)

6.2

Isoelectric Point (pI)

50.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004322)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57570 AT3G57570
fragaria_vesca	FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_7g07942 FvH4_7g07943
malus_domestica	MD05G1111300.v1.1
prunus_persica	Prupe.8G156400_v2.0.a1 Prupe.8G156400_v2.0.a1
pyrus_communis	pycom05g10710
rosa_chinensis	RchiOBHm_Chr6g0247071 RchiOBHm_Chr7g0177161
rosa_laevigata	RLG00000015224
rosa_multiflora	Rmu_sc0002476.1_g000020 Rmu_sc0004577.1_g000007 Rmu_sc0005310.1_g000018 Rmu_sc0027214.1_g000001
rosa_roxburghii	Rroxscaffold_7G00214360
rosa_rugosa	Rorug05G0522000.1
rosa_samantha	Rh6AG037100 Rh6BG031800 Rh6CG033000 Rh6CG033100 Rh6DG030800 Rh7AG003700 Rh7CG003400
rosa_wichuraiana	Rw6G003180 Rw7G000300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3122
AatII	GACGTC	1 cut(s)	80
Acc36I	ACCTGC	4 cut(s)	1118, 1738, 2811, 3122
AccB1I	GGYRCC	1 cut(s)	2851
AccB7I	CCANNNNNTGG	1 cut(s)	340
AccBSI	CCGCTC	1 cut(s)	251
AccII	CGCG	2 cut(s)	151, 2970
AccIII	TCCGGA	1 cut(s)	526
AclWI	GGATC	7 cut(s)	843, 1104, 1900, 2690, 3081, 3118, 3236
AcoI	YGGCCR	3 cut(s)	91, 331, 734
AcsI	RAATTY	3 cut(s)	1067, 1220, 2378
AcuI	CTGAAG	1 cut(s)	1848
AcvI	CACGTG	1 cut(s)	2773
AcyI	GRCGYC	4 cut(s)	77, 141, 246, 801
AdeI	CACNNNGTG	1 cut(s)	552
AfaI	GTAC	7 cut(s)	454, 462, 864, 1272, 1605, 3038, 3219
AfiI	CCNNNNNNNGG	6 cut(s)	150, 292, 340, 506, 1198, 2881
AflII	CTTAAG	1 cut(s)	929
AjiI	CACGTC	2 cut(s)	2526, 2960
AjnI	CCWGG	3 cut(s)	333, 1354, 2563
Alw21I	GWGCWC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
Alw26I	GTCTC	9 cut(s)	199, 1154, 1240, 1370, 1479, 2588, 2966, 3091, 3156
Alw44I	GTGCAC	1 cut(s)	2768
AlwI	GGATC	7 cut(s)	843, 1104, 1900, 2690, 3081, 3118, 3236
AlwNI	CAGNNNCTG	4 cut(s)	788, 2060, 2342, 2924
Aor13HI	TCCGGA	1 cut(s)	526
AoxI	GGCC	7 cut(s)	91, 181, 331, 734, 750, 2542, 2609
ApaLI	GTGCAC	1 cut(s)	2768
ApeKI	GCWGC	9 cut(s)	1289, 1843, 2060, 2124, 2402, 2471, 2689, 2744, 3005
ApoI	RAATTY	3 cut(s)	1067, 1220, 2378
ArsI	GACNNNNNNTTYG	2 cut(s)	1976, 2008
AseI	ATTAAT	2 cut(s)	1334, 1706
AspLEI	GCGC	2 cut(s)	1518, 2972
AspS9I	GGNCC	2 cut(s)	182, 751
AsuC2I	CCSGG	2 cut(s)	1756, 2546
AsuHPI	GGTGA	9 cut(s)	54, 163, 776, 1344, 1360, 1403, 2750, 2992, 3240
AsuII	TTCGAA	1 cut(s)	381
AsuNHI	GCTAGC	1 cut(s)	3280
BaeGI	GKGCMC	1 cut(s)	2772
BanI	GGYRCC	1 cut(s)	2851
BanII	GRGCYC	1 cut(s)	2412
BarI	GAAGNNNNNNTAC	2 cut(s)	1263, 1295
BauI	CACGAG	2 cut(s)	941, 2765
BbrPI	CACGTG	1 cut(s)	2773
BbsI	GAAGAC	1 cut(s)	1011
Bbv12I	GWGCWC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
BbvCI	CCTCAGC	2 cut(s)	975, 1865
BbvI	GCAGC	9 cut(s)	1276, 1830, 2047, 2136, 2389, 2458, 2676, 2731, 2992
BceAI	ACGGC	3 cut(s)	128, 343, 614
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	3 cut(s)	335, 1356, 2565
BciVI	GTATCC	2 cut(s)	534, 2326
BclI	TGATCA	2 cut(s)	672, 2775
BcnI	CCSGG	2 cut(s)	1756, 2546
BcoDI	GTCTC	9 cut(s)	199, 1154, 1240, 1370, 1479, 2588, 2966, 3091, 3156
BfaI	CTAG	7 cut(s)	860, 1002, 1418, 1440, 2133, 3162, 3281
BfoI	RGCGCY	1 cut(s)	1519
BfrI	CTTAAG	1 cut(s)	929
BfuAI	ACCTGC	4 cut(s)	1118, 1738, 2811, 3122
BfuI	GTATCC	2 cut(s)	534, 2326
BglII	AGATCT	2 cut(s)	2948, 3212
BlpI	GCTNAGC	2 cut(s)	2406, 2685
Bme1390I	CCNGG	5 cut(s)	335, 1356, 1756, 2546, 2565
BmgBI	CACGTC	2 cut(s)	2526, 2960
BmgT120I	GGNCC	2 cut(s)	182, 751
BmiI	GGNNCC	4 cut(s)	6, 184, 202, 2853
BmrFI	CCNGG	5 cut(s)	335, 1356, 1756, 2546, 2565
BmrI	ACTGGG	2 cut(s)	1208, 2452
BmsI	GCATC	9 cut(s)	571, 1378, 1697, 1777, 2214, 2642, 2664, 2731, 3160
BmtI	GCTAGC	1 cut(s)	3284
BmuI	ACTGGG	2 cut(s)	1208, 2452
BoxI	GACNNNNGTC	1 cut(s)	80
BpiI	GAAGAC	1 cut(s)	1011
BplI	GAGNNNNNCTC	8 cut(s)	467, 499, 968, 1000, 1243, 1275, 2807, 2839
Bpu10I	CCTNAGC	3 cut(s)	975, 1865, 1919
Bpu1102I	GCTNAGC	2 cut(s)	2406, 2685
Bpu14I	TTCGAA	1 cut(s)	381
BpuEI	CTTGAG	2 cut(s)	2415, 3000
BpuMI	CCSGG	2 cut(s)	1756, 2546
Bsa29I	ATCGAT	1 cut(s)	2658
BsaAI	YACGTR	4 cut(s)	464, 1580, 1603, 2773
BsaBI	GATNNNNATC	1 cut(s)	1771
BsaHI	GRCGYC	4 cut(s)	77, 141, 246, 801
BsaI	GGTCTC	2 cut(s)	1154, 3156
BsaJI	CCNNGG	2 cut(s)	393, 3069
BsaWI	WCCGGW	3 cut(s)	64, 526, 1376
BsaXI	ACNNNNNCTCC	2 cut(s)	855, 885
Bsc4I	CCNNNNNNNGG	6 cut(s)	150, 292, 340, 506, 1198, 2881
Bse118I	RCCGGY	2 cut(s)	179, 736
Bse1I	ACTGG	6 cut(s)	359, 1203, 1692, 1782, 2458, 2855
Bse3DI	GCAATG	2 cut(s)	1400, 2207
Bse8I	GATNNNNATC	1 cut(s)	1771
BseAI	TCCGGA	1 cut(s)	526
BseBI	CCWGG	3 cut(s)	335, 1356, 2565
BseCI	ATCGAT	1 cut(s)	2658
BseDI	CCNNGG	2 cut(s)	393, 3069
BseJI	GATNNNNATC	1 cut(s)	1771
BseLI	CCNNNNNNNGG	6 cut(s)	150, 292, 340, 506, 1198, 2881
BseMI	GCAATG	2 cut(s)	1400, 2207
BseNI	ACTGG	6 cut(s)	359, 1203, 1692, 1782, 2458, 2855
BseRI	GAGGAG	4 cut(s)	94, 150, 218, 1558
BseSI	GKGCMC	1 cut(s)	2772
BseX3I	CGGCCG	2 cut(s)	91, 734
BseXI	GCAGC	9 cut(s)	1276, 1830, 2047, 2136, 2389, 2458, 2676, 2731, 2992
BseYI	CCCAGC	2 cut(s)	1074, 1611
BsgI	GTGCAG	1 cut(s)	563
Bsh1236I	CGCG	2 cut(s)	151, 2970
Bsh1285I	CGRYCG	3 cut(s)	94, 737, 1912
BshFI	GGCC	7 cut(s)	93, 183, 333, 736, 752, 2544, 2611
BshNI	GGYRCC	1 cut(s)	2851
BshVI	ATCGAT	1 cut(s)	2658
BsiEI	CGRYCG	3 cut(s)	94, 737, 1912
BsiHKAI	GWGCWC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
BsiSI	CCGG	7 cut(s)	65, 180, 527, 737, 1377, 1755, 2545
BslFI	GGGAC	2 cut(s)	2512, 2734
BslI	CCNNNNNNNGG	6 cut(s)	150, 292, 340, 506, 1198, 2881
BsmAI	GTCTC	9 cut(s)	199, 1154, 1240, 1370, 1479, 2588, 2966, 3091, 3156
BsmBI	CGTCTC	2 cut(s)	199, 2966
BsmFI	GGGAC	2 cut(s)	2512, 2734
BsmI	GAATGC	3 cut(s)	555, 1555, 1828
BsnI	GGCC	7 cut(s)	93, 183, 333, 736, 752, 2544, 2611
Bso31I	GGTCTC	2 cut(s)	1154, 3156
Bsp119I	TTCGAA	1 cut(s)	381
Bsp1286I	GDGCHC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
Bsp13I	TCCGGA	1 cut(s)	526
Bsp1720I	GCTNAGC	2 cut(s)	2406, 2685
Bsp19I	CCATGG	2 cut(s)	393, 3069
BspANI	GGCC	7 cut(s)	93, 183, 333, 736, 752, 2544, 2611
BspDI	ATCGAT	1 cut(s)	2658
BspEI	TCCGGA	1 cut(s)	526
BspFNI	CGCG	2 cut(s)	151, 2970
BspHI	TCATGA	1 cut(s)	2299
BspLI	GGNNCC	4 cut(s)	6, 184, 202, 2853
BspMI	ACCTGC	4 cut(s)	1118, 1738, 2811, 3122
BspOI	GCTAGC	1 cut(s)	3284
BspPI	GGATC	7 cut(s)	843, 1104, 1900, 2690, 3081, 3118, 3236
BspQI	GCTCTTC	2 cut(s)	2352, 3105
BspT104I	TTCGAA	1 cut(s)	381
BspT107I	GGYRCC	1 cut(s)	2851
BspTI	CTTAAG	1 cut(s)	929
BspTNI	GGTCTC	2 cut(s)	1154, 3156
BsrBI	CCGCTC	1 cut(s)	251
BsrDI	GCAATG	2 cut(s)	1400, 2207
BsrFI	RCCGGY	2 cut(s)	179, 736
BsrI	ACTGG	6 cut(s)	359, 1203, 1692, 1782, 2458, 2855
BssAI	RCCGGY	2 cut(s)	179, 736
BssECI	CCNNGG	2 cut(s)	393, 3069
BssNI	GRCGYC	4 cut(s)	77, 141, 246, 801
BssSI	CACGAG	2 cut(s)	941, 2765
BssT1I	CCWWGG	2 cut(s)	393, 3069
Bst2BI	CACGAG	2 cut(s)	941, 2765
Bst2UI	CCWGG	3 cut(s)	335, 1356, 2565
Bst4CI	ACNGT	9 cut(s)	371, 1017, 1119, 1490, 1853, 1977, 2306, 2338, 3222
Bst6I	CTCTTC	4 cut(s)	114, 2352, 2958, 3105
BstACI	GRCGYC	4 cut(s)	77, 141, 246, 801
BstAFI	CTTAAG	1 cut(s)	929
BstAPI	GCANNNNNTGC	2 cut(s)	2060, 2661
BstBAI	YACGTR	4 cut(s)	464, 1580, 1603, 2773
BstBI	TTCGAA	1 cut(s)	381
BstC8I	GCNNGC	9 cut(s)	121, 982, 1043, 1111, 2094, 2905, 3010, 3282, 3286
BstDSI	CCRYGG	2 cut(s)	393, 3069
BstFNI	CGCG	2 cut(s)	151, 2970
BstH2I	RGCGCY	1 cut(s)	1519
BstHHI	GCGC	2 cut(s)	1518, 2972
BstMAI	GTCTC	9 cut(s)	199, 1154, 1240, 1370, 1479, 2588, 2966, 3091, 3156
BstMCI	CGRYCG	3 cut(s)	94, 737, 1912
BstNI	CCWGG	3 cut(s)	335, 1356, 2565
BstNSI	RCATGY	5 cut(s)	908, 1045, 2096, 3012, 3288
BstPAI	GACNNNNGTC	1 cut(s)	80
BstSCI	CCNGG	5 cut(s)	333, 1354, 1754, 2544, 2563
BstSLI	GKGCMC	1 cut(s)	2772
BstSNI	TACGTA	2 cut(s)	1580, 1603
BstUI	CGCG	2 cut(s)	151, 2970
BstV1I	GCAGC	9 cut(s)	1276, 1830, 2047, 2136, 2389, 2458, 2676, 2731, 2992
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	5 cut(s)	2695, 2948, 3073, 3212, 3241
BstXI	CCANNNNNNTGG	1 cut(s)	400
BstYI	RGATCY	5 cut(s)	2695, 2948, 3073, 3212, 3241
BstZI	CGGCCG	2 cut(s)	91, 734
Bsu15I	ATCGAT	1 cut(s)	2658
BsuI	GTATCC	2 cut(s)	534, 2326
BsuRI	GGCC	7 cut(s)	93, 183, 333, 736, 752, 2544, 2611
BsuTUI	ATCGAT	1 cut(s)	2658
BtgI	CCRYGG	2 cut(s)	393, 3069
BtrI	CACGTC	2 cut(s)	2526, 2960
BtsIMutI	CAGTG	4 cut(s)	1134, 1499, 1789, 2905
BveI	ACCTGC	4 cut(s)	1118, 1738, 2811, 3122
Cac8I	GCNNGC	9 cut(s)	121, 982, 1043, 1111, 2094, 2905, 3010, 3282, 3286
CaiI	CAGNNNCTG	4 cut(s)	788, 2060, 2342, 2924
CciI	TCATGA	1 cut(s)	2299
CfoI	GCGC	2 cut(s)	1518, 2972
Cfr10I	RCCGGY	2 cut(s)	179, 736
Cfr13I	GGNCC	2 cut(s)	182, 751
ClaI	ATCGAT	1 cut(s)	2658
CseI	GACGC	3 cut(s)	149, 254, 809
Csp6I	GTAC	7 cut(s)	453, 461, 863, 1271, 1604, 3037, 3218
CviQI	GTAC	7 cut(s)	453, 461, 863, 1271, 1604, 3037, 3218
DraIII	CACNNNGTG	1 cut(s)	552
EaeI	YGGCCR	3 cut(s)	91, 331, 734
EagI	CGGCCG	2 cut(s)	91, 734
Eam1104I	CTCTTC	4 cut(s)	114, 2352, 2958, 3105
EarI	CTCTTC	4 cut(s)	114, 2352, 2958, 3105
EciI	GGCGGA	2 cut(s)	25, 106
Ecl136II	GAGCTC	1 cut(s)	2410
EclXI	CGGCCG	2 cut(s)	91, 734
Eco105I	TACGTA	2 cut(s)	1580, 1603
Eco130I	CCWWGG	2 cut(s)	393, 3069
Eco24I	GRGCYC	1 cut(s)	2412
Eco31I	GGTCTC	2 cut(s)	1154, 3156
Eco32I	GATATC	3 cut(s)	1257, 2314, 2916
Eco52I	CGGCCG	2 cut(s)	91, 734
Eco53kI	GAGCTC	1 cut(s)	2410
Eco57I	CTGAAG	1 cut(s)	1848
Eco72I	CACGTG	1 cut(s)	2773
EcoICRI	GAGCTC	1 cut(s)	2410
EcoRI	GAATTC	1 cut(s)	2378
EcoRII	CCWGG	3 cut(s)	333, 1354, 2563
EcoRV	GATATC	3 cut(s)	1257, 2314, 2916
EcoT14I	CCWWGG	2 cut(s)	393, 3069
EcoT22I	ATGCAT	4 cut(s)	1053, 2094, 2657, 2843
EcoT38I	GRGCYC	1 cut(s)	2412
ErhI	CCWWGG	2 cut(s)	393, 3069
Esp3I	CGTCTC	2 cut(s)	199, 2966
FaqI	GGGAC	2 cut(s)	2512, 2734
FauI	CCCGC	2 cut(s)	128, 193
FbaI	TGATCA	2 cut(s)	672, 2775
FriOI	GRGCYC	1 cut(s)	2412
FspBI	CTAG	7 cut(s)	860, 1002, 1418, 1440, 2133, 3162, 3281
GlaI	GCGC	2 cut(s)	1517, 2971
GsaI	CCCAGC	2 cut(s)	1078, 1615
HaeII	RGCGCY	1 cut(s)	1519
HaeIII	GGCC	7 cut(s)	93, 183, 333, 736, 752, 2544, 2611
HapII	CCGG	7 cut(s)	65, 180, 527, 737, 1377, 1755, 2545
HgaI	GACGC	3 cut(s)	149, 254, 809
HhaI	GCGC	2 cut(s)	1518, 2972
Hin1I	GRCGYC	4 cut(s)	77, 141, 246, 801
Hin6I	GCGC	2 cut(s)	1516, 2970
HinP1I	GCGC	2 cut(s)	1516, 2970
HincII	GTYRAC	1 cut(s)	2276
HindII	GTYRAC	1 cut(s)	2276
HindIII	AAGCTT	1 cut(s)	2502
HpaII	CCGG	7 cut(s)	65, 180, 527, 737, 1377, 1755, 2545
HphI	GGTGA	9 cut(s)	54, 163, 776, 1344, 1360, 1403, 2750, 2992, 3240
Hpy166II	GTNNAC	4 cut(s)	453, 2276, 2770, 3037
Hpy8I	GTNNAC	4 cut(s)	453, 2276, 2770, 3037
Hpy99I	CGWCG	5 cut(s)	143, 212, 248, 421, 2106
HpyCH4III	ACNGT	9 cut(s)	371, 1017, 1119, 1490, 1853, 1977, 2306, 2338, 3222
Hsp92I	GRCGYC	4 cut(s)	77, 141, 246, 801
HspAI	GCGC	2 cut(s)	1516, 2970
Kpn2I	TCCGGA	1 cut(s)	526
Ksp22I	TGATCA	2 cut(s)	672, 2775
LguI	GCTCTTC	2 cut(s)	2352, 3105
LmnI	GCTCC	6 cut(s)	138, 206, 790, 882, 919, 2459
Lsp1109I	GCAGC	9 cut(s)	1276, 1830, 2047, 2136, 2389, 2458, 2676, 2731, 2992
LweI	GCATC	9 cut(s)	571, 1378, 1697, 1777, 2214, 2642, 2664, 2731, 3160
MaeI	CTAG	7 cut(s)	860, 1002, 1418, 1440, 2133, 3162, 3281
MaeIII	GTNAC	7 cut(s)	82, 487, 695, 739, 962, 1130, 2338
MbiI	CCGCTC	1 cut(s)	251
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	5 cut(s)	2695, 2948, 3073, 3212, 3241
MhlI	GDGCHC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
MlyI	GAGTC	8 cut(s)	50, 77, 206, 311, 2041, 2159, 2825, 2915
MmeI	TCCRAC	6 cut(s)	24, 1007, 1074, 1561, 2031, 2844
Mph1103I	ATGCAT	4 cut(s)	1053, 2094, 2657, 2843
MroI	TCCGGA	1 cut(s)	526
MslI	CAYNNNNRTG	5 cut(s)	287, 1046, 1580, 2040, 2978
MspA1I	CMGCKG	2 cut(s)	2233, 3032
MspCI	CTTAAG	1 cut(s)	929
MspI	CCGG	7 cut(s)	65, 180, 527, 737, 1377, 1755, 2545
MspR9I	CCNGG	5 cut(s)	335, 1356, 1756, 2546, 2565
MunI	CAATTG	1 cut(s)	570
Mva1269I	GAATGC	3 cut(s)	555, 1555, 1828
MvaI	CCWGG	3 cut(s)	335, 1356, 2565
MvnI	CGCG	2 cut(s)	151, 2970
NciI	CCSGG	2 cut(s)	1756, 2546
NcoI	CCATGG	2 cut(s)	393, 3069
NheI	GCTAGC	1 cut(s)	3280
NlaIV	GGNNCC	4 cut(s)	6, 184, 202, 2853
NmeAIII	GCCGAG	3 cut(s)	69, 119, 232
NmuCI	GTSAC	2 cut(s)	82, 1130
NsiI	ATGCAT	4 cut(s)	1053, 2094, 2657, 2843
NspI	RCATGY	5 cut(s)	908, 1045, 2096, 3012, 3288
NspV	TTCGAA	1 cut(s)	381
PaeI	GCATGC	4 cut(s)	1045, 2096, 3012, 3288
PagI	TCATGA	1 cut(s)	2299
PaqCI	CACCTGC	1 cut(s)	3122
PciSI	GCTCTTC	2 cut(s)	2352, 3105
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PctI	GAATGC	3 cut(s)	555, 1555, 1828
PfeI	GAWTC	8 cut(s)	716, 791, 1408, 1592, 2255, 2549, 2702, 2731
PflMI	CCANNNNNTGG	1 cut(s)	340
Ple19I	CGATCG	1 cut(s)	1912
PleI	GAGTC	8 cut(s)	50, 76, 206, 311, 2040, 2159, 2824, 2915
PmaCI	CACGTG	1 cut(s)	2773
PmlI	CACGTG	1 cut(s)	2773
PpsI	GAGTC	8 cut(s)	50, 76, 206, 311, 2040, 2159, 2824, 2915
Ppu21I	YACGTR	4 cut(s)	464, 1580, 1603, 2773
PshAI	GACNNNNGTC	1 cut(s)	80
PshBI	ATTAAT	2 cut(s)	1334, 1706
Psp124BI	GAGCTC	1 cut(s)	2412
Psp6I	CCWGG	3 cut(s)	333, 1354, 2563
PspCI	CACGTG	1 cut(s)	2773
PspFI	CCCAGC	2 cut(s)	1074, 1611
PspGI	CCWGG	3 cut(s)	333, 1354, 2563
PspN4I	GGNNCC	4 cut(s)	6, 184, 202, 2853
PspPI	GGNCC	2 cut(s)	182, 751
PstNI	CAGNNNCTG	4 cut(s)	788, 2060, 2342, 2924
PsuI	RGATCY	5 cut(s)	2695, 2948, 3073, 3212, 3241
PvuI	CGATCG	1 cut(s)	1912
PvuII	CAGCTG	1 cut(s)	3032
RsaI	GTAC	7 cut(s)	454, 462, 864, 1272, 1605, 3038, 3219
RsaNI	GTAC	7 cut(s)	453, 461, 863, 1271, 1604, 3037, 3218
RseI	CAYNNNNRTG	5 cut(s)	287, 1046, 1580, 2040, 2978
SacI	GAGCTC	1 cut(s)	2412
SapI	GCTCTTC	2 cut(s)	2352, 3105
Sau96I	GGNCC	2 cut(s)	182, 751
SchI	GAGTC	8 cut(s)	50, 77, 206, 311, 2041, 2159, 2825, 2915
ScrFI	CCNGG	5 cut(s)	335, 1356, 1756, 2546, 2565
SduI	GDGCHC	6 cut(s)	1806, 2049, 2076, 2412, 2644, 2772
SfaNI	GCATC	9 cut(s)	571, 1378, 1697, 1777, 2214, 2642, 2664, 2731, 3160
SfuI	TTCGAA	1 cut(s)	381
SmiMI	CAYNNNNRTG	5 cut(s)	287, 1046, 1580, 2040, 2978
SmlI	CTYRAG	3 cut(s)	929, 2430, 3015
SmoI	CTYRAG	3 cut(s)	929, 2430, 3015
SnaBI	TACGTA	2 cut(s)	1580, 1603
SphI	GCATGC	4 cut(s)	1045, 2096, 3012, 3288
SspI	AATATT	3 cut(s)	1008, 1338, 2589
SspMI	CTAG	7 cut(s)	860, 1002, 1418, 1440, 2133, 3162, 3281
SstI	GAGCTC	1 cut(s)	2412
StyD4I	CCNGG	5 cut(s)	333, 1354, 1754, 2544, 2563
StyI	CCWWGG	2 cut(s)	393, 3069
TaaI	ACNGT	9 cut(s)	371, 1017, 1119, 1490, 1853, 1977, 2306, 2338, 3222
TatI	WGTACW	3 cut(s)	452, 862, 3217
TauI	GCSGC	4 cut(s)	154, 251, 333, 736
TfiI	GAWTC	8 cut(s)	716, 791, 1408, 1592, 2255, 2549, 2702, 2731
TscAI	CASTG	4 cut(s)	1141, 1499, 1789, 2905
TseFI	GTSAC	2 cut(s)	82, 1130
TseI	GCWGC	9 cut(s)	1289, 1843, 2060, 2124, 2402, 2471, 2689, 2744, 3005
Tsp45I	GTSAC	2 cut(s)	82, 1130
TspGWI	ACGGA	2 cut(s)	181, 2749
TspRI	CASTG	4 cut(s)	1141, 1499, 1789, 2905
Van91I	CCANNNNNTGG	1 cut(s)	340
Vha464I	CTTAAG	1 cut(s)	929
VneI	GTGCAC	1 cut(s)	2768
VspI	ATTAAT	2 cut(s)	1334, 1706
XapI	RAATTY	3 cut(s)	1067, 1220, 2378
XbaI	TCTAGA	2 cut(s)	1417, 2132
XceI	RCATGY	5 cut(s)	908, 1045, 2096, 3012, 3288
XspI	CTAG	7 cut(s)	860, 1002, 1418, 1440, 2133, 3162, 3281
ZraI	GACGTC	1 cut(s)	78
Zsp2I	ATGCAT	4 cut(s)	1053, 2094, 2657, 2843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.