Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004322

Physical Location & Seq

Genomic Coordinates Forward (+)

3108029 .. 3114466

Gene Structure 6438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG033100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGCTAATGCATTTGGAAGATCAGAAATTTTCCCAGCATTACAAAGAATTGTTGGATCAATACTTAGCAGGCATACAGTTTTATGCAGGTCACACTGAGAATAAGGATGGGAGTTCTGAGACCATAAAGTTTTTCCTGAATTGTTTATGCCTTCTACTGGGGCGATTTGATAGCAAGAAATTTGAGAGCGTAGTCTCAGAATACGGGATGAGGATATCTCAGGTTCTTGTACCACAGCTTCATTCTGCTGCTGATGATGTTATAGACGGGGTTGTCTGCATATTCAAAGCATTAATATTCAAGCAAAAATCACCTGGAAGCAGTCTCACCGACACCGGAGAGGTGGATGCTGTGCTTCCATTGCTGATTCACCTTCTAGATGAACGGGATGGCACAGCTAGAGCTGTGGTTCTGCTTATAGCAGAATACTGCTTGATGAGCAGAGACAGTCAGTGCCTTAAAGAAGTTATGGAGCGCCTTGCTTCTGAAAATGTCCAACAGAGGAGGAATGCAGTTGATGTTATATCAGAAGTCATACATATGTCGTCAGATTCAAAAAACATACATACCCAGCTATCATGGCACGATATAGCAAAGCACTTGCTTGTGCTACTTGAAGATGAAGAAATTGCAATTCGGGAACAAGCATCCAGTTTGCTTCCATTAATTGACCCTTCATTAGTTTTACCTGCTTTAGTTAATCTGATTTACTCCGGGGATGAAAGATTGCAATCAACTGCCAGTGATGCCTGTGTTGTGGTGCTCAAATATCATAGCGAGAATGCTGAAGTTATATGTATGCTGCTTGACTGTCTTAGCAACCTCAGCCAAAATGTAAATCGAGACACAGGATCAAAATTGGAGAGCGATCGAGTGCTTAGGCTAATCCCAGAGTGGTCTAAAAGTGTGCAAAGCTGGAACTTCTTGATTGAACCGTTGATTGACAAGATGTTTGCAGAGCCATCCAACGCAAACATTGTTAGGTTTTTGAGTCATATAAGTGAGCACTTGGCAGAAGCTGCTGATGTAGTGCTCTCTTGTGTTCTAATGCATGCTAAACGACGTAAAGAGATGGATGACAGCAGCTTCTCTAGATTGGAGTGTCAGACTGATAAAAGTGAGGACTCCGAAAAAATGCAACAGACCCTTTTTGAACACCTTTGCCCATTGCTTGTAATTAAGATGCTTCCGCTGAGAGTATTTAATGATCTCAATTCAACTATCATGTATGGTCAACTTTCCAGTCAAGGCATTGTTCATGACTGTCAAGATATCAATGCCATCAATCAGGATACAGTTACCGCTCTTCTTTTGAAAAGGACATTTTGTGAGTTTGAATTCAACGATGTTCGGAAACTTGCTGCTGAGCTCTGTGGGCGTATTCATCCTCAAGTGCTAATTCCAATCATCTGTTCCCAGTTAGAATACGCTGCTGGTTCTCAGGATATAATAAAGATTAAAGCTTGTTTGTTTTCAGTTTGCACGTCCCTTGTGGTTAGAGGCCGGGAATCACTTTTTCATCCTGGTATGCTGAAAATTAGAAAAACATTAGAGACAATGCTATTATGGCCTTCCCTGGATGGGGATGAAGTTTCCAAAGCACAGCATGGATGCATCGATTGCATGGCACTAATGATATGTGCTGAGCTGCAAGATCCAGAATCATCAAACATTGTTGGGACGAAAAAGAATCACAGCGGTGCTGCATTGAGAAACTCTGTCCTCCTGTACGTGATCAACCAACTTACACAAGATAAAGACGTACCTGTTTCAGAGTCCAACTTGGATGATGTGAAATGCACGAGTGAGGTGCCAGTTCCACTCTCATTTTACCTATGCATGGCTAATGTTCTCATTAGTGCTTGCCAAAAGATATCAGACTCTGGCAAGAAACTTTTTGCTCGAAGATCTCTTCCACGTCTCATTCGCGCCGTTGAGGTGATTACAAAGTCAGAGATCAGAGCTGCATGTACTCAAGTTCTCTTTTCAGCAGTGTACCATCTGAAATCTACTATTCTTCCTTACTCCATGGATCTTCTTAAAGTCTCATTAAAAGCTCTTCAAAAGGGATCAGAGAAGGAAAGGATGGCAGGTGCAAAGCTAATGGGATCTCTTATGGCTAGTGATGATGCAATCATACAAAGTATATCGGGGGGATTAGTAGAAGCAAGATCCGTACTGTCGAGTATATCTTTGACAGATCCTTCACCCGAATTACGTCAAGTCAGCAAAAAGTTGCTAGCATGCCTAACTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

752

Amino Acids

83.7

Weight (kDa)

5.63

Isoelectric Point (pI)

52.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004322)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57570 AT3G57570
fragaria_vesca	FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_2g02670 FvH4_7g07942 FvH4_7g07943
malus_domestica	MD05G1111300.v1.1
prunus_persica	Prupe.8G156400_v2.0.a1 Prupe.8G156400_v2.0.a1
pyrus_communis	pycom05g10710
rosa_chinensis	RchiOBHm_Chr6g0247071 RchiOBHm_Chr7g0177161
rosa_laevigata	RLG00000015224
rosa_multiflora	Rmu_sc0002476.1_g000020 Rmu_sc0004577.1_g000007 Rmu_sc0005310.1_g000018 Rmu_sc0027214.1_g000001
rosa_roxburghii	Rroxscaffold_7G00214360
rosa_rugosa	Rorug05G0522000.1
rosa_samantha	Rh6AG037100 Rh6BG031800 Rh6CG033000 Rh6CG033100 Rh6DG030800 Rh7AG003700 Rh7CG003400
rosa_wichuraiana	Rw6G003180 Rw7G000300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2081
AasI	GACNNNNNNGTC	1 cut(s)	272
Acc36I	ACCTGC	3 cut(s)	77, 697, 2081
AccB1I	GGYRCC	1 cut(s)	1810
AccBSI	CCGCTC	1 cut(s)	1304
AccII	CGCG	1 cut(s)	1929
AciI	CCGC	3 cut(s)	1190, 1302, 1698
AclWI	GGATC	8 cut(s)	63, 859, 1649, 2040, 2077, 2116, 2166, 2195
AcsI	RAATTY	3 cut(s)	26, 179, 1337
AcuI	CTGAAG	1 cut(s)	807
AfaI	GTAC	6 cut(s)	231, 1730, 1764, 1972, 1997, 2178
AfiI	CCNNNNNNNGG	4 cut(s)	157, 1581, 1582, 1840
AjiI	CACGTC	2 cut(s)	1485, 1919
AjnI	CCWGG	3 cut(s)	313, 1522, 1575
AjuI	GAANNNNNNNTTGG	2 cut(s)	1396, 1428
AleI	CACNNNNGTG	1 cut(s)	1698
Alw21I	GWGCWC	4 cut(s)	765, 1008, 1035, 1371
Alw26I	GTCTC	8 cut(s)	113, 199, 329, 438, 837, 1547, 1925, 2050
AlwI	GGATC	8 cut(s)	63, 859, 1649, 2040, 2077, 2116, 2166, 2195
AlwNI	CAGNNNCTG	2 cut(s)	1019, 1883
AoxI	GGCC	2 cut(s)	1501, 1568
ApeKI	GCWGC	9 cut(s)	248, 802, 1019, 1083, 1361, 1430, 1648, 1703, 1964
ApoI	RAATTY	3 cut(s)	26, 179, 1337
ArsI	GACNNNNNNTTYG	2 cut(s)	935, 967
AseI	ATTAAT	2 cut(s)	293, 665
AspLEI	GCGC	2 cut(s)	477, 1931
AsuC2I	CCSGG	2 cut(s)	715, 1505
AsuHPI	GGTGA	5 cut(s)	303, 319, 362, 1951, 2199
AsuNHI	GCTAGC	1 cut(s)	2239
BanI	GGYRCC	1 cut(s)	1810
BanII	GRGCYC	1 cut(s)	1371
BarI	GAAGNNNNNNTAC	2 cut(s)	222, 254
BauI	CACGAG	1 cut(s)	1801
Bbv12I	GWGCWC	4 cut(s)	765, 1008, 1035, 1371
BbvCI	CCTCAGC	1 cut(s)	824
BbvI	GCAGC	9 cut(s)	235, 789, 1006, 1095, 1348, 1417, 1635, 1690, 1951
BccI	CCATC	8 cut(s)	101, 383, 970, 1066, 1289, 1574, 2007, 2080
BceAI	ACGGC	1 cut(s)	1916
BcgI	CGANNNNNNTGC	2 cut(s)	1792, 1826
BciT130I	CCWGG	3 cut(s)	315, 1524, 1577
BciVI	GTATCC	1 cut(s)	1285
BclI	TGATCA	1 cut(s)	1734
BcnI	CCSGG	2 cut(s)	715, 1505
BcoDI	GTCTC	8 cut(s)	113, 199, 329, 438, 837, 1547, 1925, 2050
BfaI	CTAG	5 cut(s)	377, 399, 1092, 2121, 2240
BfoI	RGCGCY	1 cut(s)	478
BfuAI	ACCTGC	3 cut(s)	77, 697, 2081
BfuI	GTATCC	1 cut(s)	1285
BglII	AGATCT	1 cut(s)	1907
BisI	GCNGC	9 cut(s)	249, 803, 1020, 1084, 1362, 1431, 1649, 1704, 1965
BlpI	GCTNAGC	2 cut(s)	1365, 1644
BlsI	GCNGC	9 cut(s)	250, 804, 1021, 1085, 1363, 1432, 1650, 1705, 1966
Bme1390I	CCNGG	5 cut(s)	315, 715, 1505, 1524, 1577
BmgBI	CACGTC	2 cut(s)	1485, 1919
BmiI	GGNNCC	1 cut(s)	1812
BmrFI	CCNGG	5 cut(s)	315, 715, 1505, 1524, 1577
BmrI	ACTGGG	2 cut(s)	167, 1411
BmsI	GCATC	7 cut(s)	337, 656, 736, 1173, 1601, 1623, 2119
BmtI	GCTAGC	1 cut(s)	2243
BmuI	ACTGGG	2 cut(s)	167, 1411
BplI	GAGNNNNNCTC	2 cut(s)	202, 234
Bpu10I	CCTNAGC	2 cut(s)	824, 878
Bpu1102I	GCTNAGC	2 cut(s)	1365, 1644
BpuEI	CTTGAG	2 cut(s)	1374, 1959
BpuMI	CCSGG	2 cut(s)	715, 1505
Bsa29I	ATCGAT	1 cut(s)	1617
BsaAI	YACGTR	1 cut(s)	1732
BsaBI	GATNNNNATC	1 cut(s)	730
BsaI	GGTCTC	1 cut(s)	113
BsaJI	CCNNGG	3 cut(s)	714, 1575, 2028
BsaWI	WCCGGW	1 cut(s)	335
Bsc4I	CCNNNNNNNGG	4 cut(s)	157, 1581, 1582, 1840
Bse1I	ACTGG	6 cut(s)	162, 651, 741, 1242, 1417, 1814
Bse3DI	GCAATG	2 cut(s)	359, 1166
Bse8I	GATNNNNATC	1 cut(s)	730
BseBI	CCWGG	3 cut(s)	315, 1524, 1577
BseCI	ATCGAT	1 cut(s)	1617
BseDI	CCNNGG	3 cut(s)	714, 1575, 2028
BseJI	GATNNNNATC	1 cut(s)	730
BseLI	CCNNNNNNNGG	4 cut(s)	157, 1581, 1582, 1840
BseMI	GCAATG	2 cut(s)	359, 1166
BseMII	CTCAG	9 cut(s)	87, 108, 210, 233, 838, 1184, 1356, 1454, 1635
BseNI	ACTGG	6 cut(s)	162, 651, 741, 1242, 1417, 1814
BseRI	GAGGAG	1 cut(s)	517
BseXI	GCAGC	9 cut(s)	235, 789, 1006, 1095, 1348, 1417, 1635, 1690, 1951
BseYI	CCCAGC	2 cut(s)	33, 570
Bsh1236I	CGCG	1 cut(s)	1929
Bsh1285I	CGRYCG	1 cut(s)	871
BshFI	GGCC	2 cut(s)	1503, 1570
BshNI	GGYRCC	1 cut(s)	1810
BshVI	ATCGAT	1 cut(s)	1617
BsiEI	CGRYCG	1 cut(s)	871
BsiHKAI	GWGCWC	4 cut(s)	765, 1008, 1035, 1371
BsiSI	CCGG	3 cut(s)	336, 714, 1504
BslFI	GGGAC	2 cut(s)	1471, 1693
BslI	CCNNNNNNNGG	4 cut(s)	157, 1581, 1582, 1840
BsmAI	GTCTC	8 cut(s)	113, 199, 329, 438, 837, 1547, 1925, 2050
BsmBI	CGTCTC	1 cut(s)	1925
BsmFI	GGGAC	2 cut(s)	1471, 1693
BsmI	GAATGC	2 cut(s)	514, 787
BsnI	GGCC	2 cut(s)	1503, 1570
Bso31I	GGTCTC	1 cut(s)	113
Bsp1286I	GDGCHC	4 cut(s)	765, 1008, 1035, 1371
Bsp1720I	GCTNAGC	2 cut(s)	1365, 1644
Bsp19I	CCATGG	1 cut(s)	2028
BspACI	CCGC	3 cut(s)	1190, 1302, 1698
BspANI	GGCC	2 cut(s)	1503, 1570
BspCNI	CTCAG	9 cut(s)	88, 109, 209, 232, 837, 1185, 1357, 1453, 1636
BspDI	ATCGAT	1 cut(s)	1617
BspFNI	CGCG	1 cut(s)	1929
BspHI	TCATGA	1 cut(s)	1258
BspLI	GGNNCC	1 cut(s)	1812
BspMI	ACCTGC	3 cut(s)	77, 697, 2081
BspOI	GCTAGC	1 cut(s)	2243
BspPI	GGATC	8 cut(s)	63, 859, 1649, 2040, 2077, 2116, 2166, 2195
BspQI	GCTCTTC	2 cut(s)	1311, 2064
BspT107I	GGYRCC	1 cut(s)	1810
BspTNI	GGTCTC	1 cut(s)	113
BsrBI	CCGCTC	1 cut(s)	1304
BsrDI	GCAATG	2 cut(s)	359, 1166
BsrI	ACTGG	6 cut(s)	162, 651, 741, 1242, 1417, 1814
BssECI	CCNNGG	3 cut(s)	714, 1575, 2028
BssSI	CACGAG	1 cut(s)	1801
BssT1I	CCWWGG	1 cut(s)	2028
Bst2BI	CACGAG	1 cut(s)	1801
Bst2UI	CCWGG	3 cut(s)	315, 1524, 1577
Bst4CI	ACNGT	7 cut(s)	78, 449, 812, 936, 1265, 1297, 2181
Bst6I	CTCTTC	3 cut(s)	1311, 1917, 2064
BstAPI	GCANNNNNTGC	2 cut(s)	1019, 1620
BstBAI	YACGTR	1 cut(s)	1732
BstC8I	GCNNGC	5 cut(s)	70, 1053, 1864, 2241, 2245
BstDSI	CCRYGG	1 cut(s)	2028
BstFNI	CGCG	1 cut(s)	1929
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	2 cut(s)	477, 1931
BstMAI	GTCTC	8 cut(s)	113, 199, 329, 438, 837, 1547, 1925, 2050
BstMCI	CGRYCG	1 cut(s)	871
BstMWI	GCNNNNNNNGC	9 cut(s)	361, 438, 580, 746, 825, 1019, 1375, 1567, 1620
BstNI	CCWGG	3 cut(s)	315, 1524, 1577
BstNSI	RCATGY	3 cut(s)	1055, 1971, 2247
BstSCI	CCNGG	5 cut(s)	313, 713, 1503, 1522, 1575
BstUI	CGCG	1 cut(s)	1929
BstV1I	GCAGC	9 cut(s)	235, 789, 1006, 1095, 1348, 1417, 1635, 1690, 1951
BstX2I	RGATCY	6 cut(s)	1654, 1907, 2032, 2108, 2171, 2200
BstYI	RGATCY	6 cut(s)	1654, 1907, 2032, 2108, 2171, 2200
Bsu15I	ATCGAT	1 cut(s)	1617
BsuI	GTATCC	1 cut(s)	1285
BsuRI	GGCC	2 cut(s)	1503, 1570
BsuTUI	ATCGAT	1 cut(s)	1617
BtgI	CCRYGG	1 cut(s)	2028
BtrI	CACGTC	2 cut(s)	1485, 1919
BtsI	GCAGTG	1 cut(s)	1998
BtsIMutI	CAGTG	4 cut(s)	93, 458, 748, 1998
BveI	ACCTGC	3 cut(s)	77, 697, 2081
Cac8I	GCNNGC	5 cut(s)	70, 1053, 1864, 2241, 2245
CaiI	CAGNNNCTG	2 cut(s)	1019, 1883
CciI	TCATGA	1 cut(s)	1258
CfoI	GCGC	2 cut(s)	477, 1931
ClaI	ATCGAT	1 cut(s)	1617
Csp6I	GTAC	6 cut(s)	230, 1729, 1763, 1971, 1996, 2177
CviQI	GTAC	6 cut(s)	230, 1729, 1763, 1971, 1996, 2177
DrdI	GACNNNNNNGTC	1 cut(s)	272
DseDI	GACNNNNNNGTC	1 cut(s)	272
Eam1104I	CTCTTC	3 cut(s)	1311, 1917, 2064
EarI	CTCTTC	3 cut(s)	1311, 1917, 2064
Ecl136II	GAGCTC	1 cut(s)	1369
Eco130I	CCWWGG	1 cut(s)	2028
Eco24I	GRGCYC	1 cut(s)	1371
Eco31I	GGTCTC	1 cut(s)	113
Eco32I	GATATC	3 cut(s)	216, 1273, 1875
Eco53kI	GAGCTC	1 cut(s)	1369
Eco57I	CTGAAG	1 cut(s)	807
EcoICRI	GAGCTC	1 cut(s)	1369
EcoRI	GAATTC	1 cut(s)	1337
EcoRII	CCWGG	3 cut(s)	313, 1522, 1575
EcoRV	GATATC	3 cut(s)	216, 1273, 1875
EcoT14I	CCWWGG	1 cut(s)	2028
EcoT22I	ATGCAT	4 cut(s)	12, 1053, 1616, 1841
EcoT38I	GRGCYC	1 cut(s)	1371
ErhI	CCWWGG	1 cut(s)	2028
Esp3I	CGTCTC	1 cut(s)	1925
FaqI	GGGAC	2 cut(s)	1471, 1693
FauNDI	CATATG	1 cut(s)	540
FbaI	TGATCA	1 cut(s)	1734
Fnu4HI	GCNGC	9 cut(s)	249, 803, 1020, 1084, 1362, 1431, 1649, 1704, 1965
FriOI	GRGCYC	1 cut(s)	1371
Fsp4HI	GCNGC	9 cut(s)	249, 803, 1020, 1084, 1362, 1431, 1649, 1704, 1965
FspBI	CTAG	5 cut(s)	377, 399, 1092, 2121, 2240
GlaI	GCGC	2 cut(s)	476, 1930
GluI	GCNGC	9 cut(s)	249, 803, 1020, 1084, 1362, 1431, 1649, 1704, 1965
GsaI	CCCAGC	2 cut(s)	37, 574
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	2 cut(s)	1503, 1570
HapII	CCGG	3 cut(s)	336, 714, 1504
HhaI	GCGC	2 cut(s)	477, 1931
Hin6I	GCGC	2 cut(s)	475, 1929
HinP1I	GCGC	2 cut(s)	475, 1929
HincII	GTYRAC	1 cut(s)	1235
HindII	GTYRAC	1 cut(s)	1235
HindIII	AAGCTT	1 cut(s)	1461
HinfI	GANTC	9 cut(s)	367, 551, 991, 1124, 1508, 1661, 1690, 1775, 1880
HpaII	CCGG	3 cut(s)	336, 714, 1504
HphI	GGTGA	5 cut(s)	303, 319, 362, 1951, 2199
Hpy166II	GTNNAC	2 cut(s)	1235, 1996
Hpy8I	GTNNAC	2 cut(s)	1235, 1996
Hpy99I	CGWCG	1 cut(s)	1065
HpyAV	CCTTC	6 cut(s)	161, 383, 684, 1581, 2071, 2214
HpyCH4III	ACNGT	7 cut(s)	78, 449, 812, 936, 1265, 1297, 2181
HpyCH4IV	ACGT	6 cut(s)	1063, 1484, 1731, 1761, 1918, 2218
HpyF10VI	GCNNNNNNNGC	9 cut(s)	361, 438, 580, 746, 825, 1019, 1375, 1567, 1620
HpySE526I	ACGT	6 cut(s)	1063, 1484, 1731, 1761, 1918, 2218
HspAI	GCGC	2 cut(s)	475, 1929
Ksp22I	TGATCA	1 cut(s)	1734
LguI	GCTCTTC	2 cut(s)	1311, 2064
LmnI	GCTCC	1 cut(s)	472
Lsp1109I	GCAGC	9 cut(s)	235, 789, 1006, 1095, 1348, 1417, 1635, 1690, 1951
LweI	GCATC	7 cut(s)	337, 656, 736, 1173, 1601, 1623, 2119
MaeI	CTAG	5 cut(s)	377, 399, 1092, 2121, 2240
MaeII	ACGT	6 cut(s)	1063, 1484, 1731, 1761, 1918, 2218
MaeIII	GTNAC	2 cut(s)	89, 1297
MbiI	CCGCTC	1 cut(s)	1304
MboII	GAAGA	9 cut(s)	29, 629, 635, 1298, 1904, 1917, 2009, 2027, 2051
MflI	RGATCY	6 cut(s)	1654, 1907, 2032, 2108, 2171, 2200
MhlI	GDGCHC	4 cut(s)	765, 1008, 1035, 1371
MlyI	GAGTC	4 cut(s)	1000, 1118, 1784, 1874
MmeI	TCCRAC	4 cut(s)	33, 520, 990, 1803
Mph1103I	ATGCAT	4 cut(s)	12, 1053, 1616, 1841
MseI	TTAA	9 cut(s)	293, 459, 665, 699, 1179, 1203, 1458, 2040, 2051
MslI	CAYNNNNRTG	3 cut(s)	539, 999, 1698
MspA1I	CMGCKG	2 cut(s)	1192, 1698
MspI	CCGG	3 cut(s)	336, 714, 1504
MspR9I	CCNGG	5 cut(s)	315, 715, 1505, 1524, 1577
Mva1269I	GAATGC	2 cut(s)	514, 787
MvaI	CCWGG	3 cut(s)	315, 1524, 1577
MvnI	CGCG	1 cut(s)	1929
MwoI	GCNNNNNNNGC	9 cut(s)	361, 438, 580, 746, 825, 1019, 1375, 1567, 1620
NciI	CCSGG	2 cut(s)	715, 1505
NcoI	CCATGG	1 cut(s)	2028
NdeI	CATATG	1 cut(s)	540
NheI	GCTAGC	1 cut(s)	2239
NlaIV	GGNNCC	1 cut(s)	1812
NmuCI	GTSAC	1 cut(s)	89
NsiI	ATGCAT	4 cut(s)	12, 1053, 1616, 1841
NspI	RCATGY	3 cut(s)	1055, 1971, 2247
OliI	CACNNNNGTG	1 cut(s)	1698
PaeI	GCATGC	2 cut(s)	1055, 2247
PagI	TCATGA	1 cut(s)	1258
PaqCI	CACCTGC	1 cut(s)	2081
PciSI	GCTCTTC	2 cut(s)	1311, 2064
PctI	GAATGC	2 cut(s)	514, 787
PfeI	GAWTC	5 cut(s)	367, 551, 1508, 1661, 1690
PkrI	GCNGC	9 cut(s)	250, 804, 1021, 1085, 1363, 1432, 1650, 1705, 1966
Ple19I	CGATCG	1 cut(s)	871
PleI	GAGTC	4 cut(s)	999, 1118, 1783, 1874
PpsI	GAGTC	4 cut(s)	999, 1118, 1783, 1874
Ppu21I	YACGTR	1 cut(s)	1732
PshBI	ATTAAT	2 cut(s)	293, 665
Psp124BI	GAGCTC	1 cut(s)	1371
Psp6I	CCWGG	3 cut(s)	313, 1522, 1575
PspFI	CCCAGC	2 cut(s)	33, 570
PspGI	CCWGG	3 cut(s)	313, 1522, 1575
PspN4I	GGNNCC	1 cut(s)	1812
PstNI	CAGNNNCTG	2 cut(s)	1019, 1883
PsuI	RGATCY	6 cut(s)	1654, 1907, 2032, 2108, 2171, 2200
PvuI	CGATCG	1 cut(s)	871
RsaI	GTAC	6 cut(s)	231, 1730, 1764, 1972, 1997, 2178
RsaNI	GTAC	6 cut(s)	230, 1729, 1763, 1971, 1996, 2177
RseI	CAYNNNNRTG	3 cut(s)	539, 999, 1698
SacI	GAGCTC	1 cut(s)	1371
SapI	GCTCTTC	2 cut(s)	1311, 2064
SaqAI	TTAA	9 cut(s)	293, 459, 665, 699, 1179, 1203, 1458, 2040, 2051
SatI	GCNGC	9 cut(s)	249, 803, 1020, 1084, 1362, 1431, 1649, 1704, 1965
SchI	GAGTC	4 cut(s)	1000, 1118, 1784, 1874
ScrFI	CCNGG	5 cut(s)	315, 715, 1505, 1524, 1577
SduI	GDGCHC	4 cut(s)	765, 1008, 1035, 1371
SfaNI	GCATC	7 cut(s)	337, 656, 736, 1173, 1601, 1623, 2119
SmiMI	CAYNNNNRTG	3 cut(s)	539, 999, 1698
SmlI	CTYRAG	2 cut(s)	1389, 1974
SmoI	CTYRAG	2 cut(s)	1389, 1974
SphI	GCATGC	2 cut(s)	1055, 2247
SsiI	CCGC	3 cut(s)	1190, 1302, 1698
SspI	AATATT	1 cut(s)	297
SspMI	CTAG	5 cut(s)	377, 399, 1092, 2121, 2240
SstI	GAGCTC	1 cut(s)	1371
StyD4I	CCNGG	5 cut(s)	313, 713, 1503, 1522, 1575
StyI	CCWWGG	1 cut(s)	2028
TaaI	ACNGT	7 cut(s)	78, 449, 812, 936, 1265, 1297, 2181
TaiI	ACGT	6 cut(s)	1066, 1487, 1734, 1764, 1921, 2221
TaqI	TCGA	5 cut(s)	841, 871, 1617, 1903, 2183
TatI	WGTACW	1 cut(s)	1970
TfiI	GAWTC	5 cut(s)	367, 551, 1508, 1661, 1690
Tru1I	TTAA	9 cut(s)	293, 459, 665, 699, 1179, 1203, 1458, 2040, 2051
Tru9I	TTAA	9 cut(s)	293, 459, 665, 699, 1179, 1203, 1458, 2040, 2051
TscAI	CASTG	4 cut(s)	100, 458, 748, 1998
TseFI	GTSAC	1 cut(s)	89
TseI	GCWGC	9 cut(s)	248, 802, 1019, 1083, 1361, 1430, 1648, 1703, 1964
Tsp45I	GTSAC	1 cut(s)	89
TspDTI	ATGAA	9 cut(s)	230, 396, 636, 666, 735, 1247, 1373, 1508, 1602
TspGWI	ACGGA	1 cut(s)	2164
TspRI	CASTG	4 cut(s)	100, 458, 748, 1998
VspI	ATTAAT	2 cut(s)	293, 665
XapI	RAATTY	3 cut(s)	26, 179, 1337
XbaI	TCTAGA	2 cut(s)	376, 1091
XceI	RCATGY	3 cut(s)	1055, 1971, 2247
XspI	CTAG	5 cut(s)	377, 399, 1092, 2121, 2240
Zsp2I	ATGCAT	4 cut(s)	12, 1053, 1616, 1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.