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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43250 |
| fragaria_vesca | FvH4_7g14000 |
| malus_domestica | MD01G1056400.v1.1 MD01G1056500.v1.1 MD07G1139400.v1.1 |
| prunus_persica | Prupe.2G167200_v2.0.a1 |
| pyrus_communis | pycom01g08200 pycom01g08280 pycom01g08450 pycom07g13680 pycom07g13720 |
| rosa_chinensis | RchiOBHm_Chr1g0354651 |
| rosa_laevigata | RLG00000028191 |
| rosa_multiflora | Rmu_co8354095.1_g000001 Rmu_sc0006632.1_g000012 Rmu_sc0013673.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00300870 |
| rosa_rugosa | Rorug01G0243700 |
| rosa_samantha | Rh1AG254900 Rh1BG225500 Rh1CG238000 Rh1DG253500 |
| rosa_wichuraiana | Rw1G022300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 879 |
| Acc36I | ACCTGC | 1 cut(s) | 33 |
| AccB1I | GGYRCC | 1 cut(s) | 1877 |
| AccBSI | CCGCTC | 1 cut(s) | 1692 |
| AccII | CGCG | 2 cut(s) | 790, 1827 |
| AccIII | TCCGGA | 3 cut(s) | 18, 518, 951 |
| AclWI | GGATC | 2 cut(s) | 1059, 1585 |
| AcsI | RAATTY | 2 cut(s) | 509, 1830 |
| AcuI | CTGAAG | 4 cut(s) | 89, 1430, 1433, 1940 |
| AfaI | GTAC | 5 cut(s) | 51, 90, 695, 1887, 1913 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 747, 857, 1375, 1414, 1711 |
| AgsI | TTSAA | 9 cut(s) | 320, 509, 636, 985, 1120, 1365, 1567, 1775, 1937 |
| AjnI | CCWGG | 1 cut(s) | 1845 |
| AlwI | GGATC | 2 cut(s) | 1059, 1585 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 352 |
| Aor13HI | TCCGGA | 3 cut(s) | 18, 518, 951 |
| AoxI | GGCC | 4 cut(s) | 38, 177, 1092, 1308 |
| ApeKI | GCWGC | 2 cut(s) | 1781, 1799 |
| ApoI | RAATTY | 2 cut(s) | 509, 1830 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1030, 1062 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 526, 1791 |
| AspLEI | GCGC | 1 cut(s) | 880 |
| AspS9I | GGNCC | 7 cut(s) | 16, 39, 178, 784, 1093, 1308, 1687 |
| AsuC2I | CCSGG | 3 cut(s) | 292, 1312, 1595 |
| AsuHPI | GGTGA | 4 cut(s) | 563, 638, 920, 1250 |
| AsuII | TTCGAA | 1 cut(s) | 1165 |
| AvaII | GGWCC | 3 cut(s) | 16, 784, 1687 |
| AxyI | CCTNAGG | 1 cut(s) | 547 |
| BanI | GGYRCC | 1 cut(s) | 1877 |
| BbsI | GAAGAC | 2 cut(s) | 1154, 1637 |
| BbvCI | CCTCAGC | 1 cut(s) | 477 |
| BbvI | GCAGC | 2 cut(s) | 1786, 1793 |
| BccI | CCATC | 5 cut(s) | 305, 859, 1760, 1813, 1868 |
| BceAI | ACGGC | 1 cut(s) | 1697 |
| BciT130I | CCWGG | 1 cut(s) | 1847 |
| BcnI | CCSGG | 3 cut(s) | 292, 1312, 1595 |
| BfaI | CTAG | 5 cut(s) | 465, 588, 774, 1146, 1527 |
| BfmI | CTRYAG | 1 cut(s) | 915 |
| BfuAI | ACCTGC | 1 cut(s) | 33 |
| BglII | AGATCT | 1 cut(s) | 1892 |
| BisI | GCNGC | 3 cut(s) | 462, 1782, 1800 |
| BlsI | GCNGC | 3 cut(s) | 463, 1783, 1801 |
| Bme1390I | CCNGG | 4 cut(s) | 292, 1312, 1595, 1847 |
| Bme18I | GGWCC | 3 cut(s) | 16, 784, 1687 |
| BmgT120I | GGNCC | 7 cut(s) | 16, 39, 178, 784, 1093, 1308, 1687 |
| BmiI | GGNNCC | 7 cut(s) | 23, 600, 786, 1103, 1309, 1688, 1879 |
| BmrFI | CCNGG | 4 cut(s) | 292, 1312, 1595, 1847 |
| BmsI | GCATC | 6 cut(s) | 232, 550, 876, 1132, 1586, 1859 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1071 |
| BpiI | GAAGAC | 2 cut(s) | 1154, 1637 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 530, 562 |
| BpmI | CTGGAG | 3 cut(s) | 389, 426, 1563 |
| Bpu10I | CCTNAGC | 2 cut(s) | 255, 477 |
| Bpu14I | TTCGAA | 1 cut(s) | 1165 |
| BpuMI | CCSGG | 3 cut(s) | 292, 1312, 1595 |
| BsaJI | CCNNGG | 5 cut(s) | 204, 577, 741, 1311, 1709 |
| BsaWI | WCCGGW | 3 cut(s) | 18, 518, 951 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 300, 330, 399, 429 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 747, 857, 1375, 1414, 1711 |
| Bse1I | ACTGG | 4 cut(s) | 729, 1058, 1178, 1815 |
| Bse21I | CCTNAGG | 1 cut(s) | 547 |
| Bse3DI | GCAATG | 2 cut(s) | 249, 1653 |
| BseAI | TCCGGA | 3 cut(s) | 18, 518, 951 |
| BseBI | CCWGG | 1 cut(s) | 1847 |
| BseDI | CCNNGG | 5 cut(s) | 204, 577, 741, 1311, 1709 |
| BseGI | GGATG | 4 cut(s) | 214, 268, 1147, 1730 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 747, 857, 1375, 1414, 1711 |
| BseMI | GCAATG | 2 cut(s) | 249, 1653 |
| BseNI | ACTGG | 4 cut(s) | 729, 1058, 1178, 1815 |
| BseXI | GCAGC | 2 cut(s) | 1786, 1793 |
| BseYI | CCCAGC | 1 cut(s) | 1745 |
| BsgI | GTGCAG | 2 cut(s) | 683, 1800 |
| Bsh1236I | CGCG | 2 cut(s) | 790, 1827 |
| BshFI | GGCC | 4 cut(s) | 40, 179, 1094, 1310 |
| BshNI | GGYRCC | 1 cut(s) | 1877 |
| BsiSI | CCGG | 6 cut(s) | 19, 291, 519, 952, 1311, 1594 |
| BslFI | GGGAC | 2 cut(s) | 770, 1494 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 747, 857, 1375, 1414, 1711 |
| BsmFI | GGGAC | 2 cut(s) | 770, 1494 |
| BsnI | GGCC | 4 cut(s) | 40, 179, 1094, 1310 |
| Bsp119I | TTCGAA | 1 cut(s) | 1165 |
| Bsp13I | TCCGGA | 3 cut(s) | 18, 518, 951 |
| Bsp1407I | TGTACA | 1 cut(s) | 1911 |
| Bsp143I | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| Bsp19I | CCATGG | 1 cut(s) | 1709 |
| BspANI | GGCC | 4 cut(s) | 40, 179, 1094, 1310 |
| BspEI | TCCGGA | 3 cut(s) | 18, 518, 951 |
| BspFNI | CGCG | 2 cut(s) | 790, 1827 |
| BspLI | GGNNCC | 7 cut(s) | 23, 600, 786, 1103, 1309, 1688, 1879 |
| BspMI | ACCTGC | 1 cut(s) | 33 |
| BspPI | GGATC | 2 cut(s) | 1059, 1585 |
| BspT104I | TTCGAA | 1 cut(s) | 1165 |
| BspT107I | GGYRCC | 1 cut(s) | 1877 |
| BsrBI | CCGCTC | 1 cut(s) | 1692 |
| BsrDI | GCAATG | 2 cut(s) | 249, 1653 |
| BsrGI | TGTACA | 1 cut(s) | 1911 |
| BsrI | ACTGG | 4 cut(s) | 729, 1058, 1178, 1815 |
| BssECI | CCNNGG | 5 cut(s) | 204, 577, 741, 1311, 1709 |
| BssMI | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| BssT1I | CCWWGG | 3 cut(s) | 204, 577, 1709 |
| Bst2UI | CCWGG | 1 cut(s) | 1847 |
| Bst4CI | ACNGT | 5 cut(s) | 360, 1477, 1561, 1610, 1916 |
| Bst6I | CTCTTC | 1 cut(s) | 1088 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 886, 1742 |
| BstAUI | TGTACA | 1 cut(s) | 1911 |
| BstBI | TTCGAA | 1 cut(s) | 1165 |
| BstDSI | CCRYGG | 1 cut(s) | 1709 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1373, 1412 |
| BstF5I | GGATG | 4 cut(s) | 214, 268, 1147, 1730 |
| BstFNI | CGCG | 2 cut(s) | 790, 1827 |
| BstHHI | GCGC | 1 cut(s) | 880 |
| BstKTI | GATC | 5 cut(s) | 826, 847, 1054, 1593, 1895 |
| BstMBI | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 251, 886, 1085, 1307, 1742 |
| BstNI | CCWGG | 1 cut(s) | 1847 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1071 |
| BstSCI | CCNGG | 4 cut(s) | 290, 1310, 1593, 1845 |
| BstSFI | CTRYAG | 1 cut(s) | 915 |
| BstUI | CGCG | 2 cut(s) | 790, 1827 |
| BstV1I | GCAGC | 2 cut(s) | 1786, 1793 |
| BstV2I | GAAGAC | 2 cut(s) | 1154, 1637 |
| BstX2I | RGATCY | 3 cut(s) | 1051, 1590, 1892 |
| BstYI | RGATCY | 3 cut(s) | 1051, 1590, 1892 |
| Bsu36I | CCTNAGG | 1 cut(s) | 547 |
| BsuRI | GGCC | 4 cut(s) | 40, 179, 1094, 1310 |
| BtgI | CCRYGG | 1 cut(s) | 1709 |
| BtsCI | GGATG | 4 cut(s) | 214, 268, 1147, 1730 |
| BtsI | GCAGTG | 2 cut(s) | 570, 1620 |
| BtsIMutI | CAGTG | 5 cut(s) | 570, 1171, 1482, 1615, 1620 |
| BveI | ACCTGC | 1 cut(s) | 33 |
| CaiI | CAGNNNCTG | 1 cut(s) | 352 |
| CfoI | GCGC | 1 cut(s) | 880 |
| Cfr13I | GGNCC | 7 cut(s) | 16, 39, 178, 784, 1093, 1308, 1687 |
| Csp6I | GTAC | 5 cut(s) | 50, 89, 694, 1886, 1912 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 591, 626 |
| CviAII | CATG | 4 cut(s) | 274, 446, 875, 1710 |
| CviQI | GTAC | 5 cut(s) | 50, 89, 694, 1886, 1912 |
| DpnI | GATC | 5 cut(s) | 825, 846, 1053, 1592, 1894 |
| DpnII | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| DraI | TTTAAA | 1 cut(s) | 1390 |
| Eam1104I | CTCTTC | 1 cut(s) | 1088 |
| EarI | CTCTTC | 1 cut(s) | 1088 |
| Eco130I | CCWWGG | 3 cut(s) | 204, 577, 1709 |
| Eco47I | GGWCC | 3 cut(s) | 16, 784, 1687 |
| Eco57I | CTGAAG | 4 cut(s) | 89, 1430, 1433, 1940 |
| Eco81I | CCTNAGG | 1 cut(s) | 547 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1373, 1412 |
| EcoO109I | RGGNCCY | 2 cut(s) | 784, 1093 |
| EcoRI | GAATTC | 1 cut(s) | 1830 |
| EcoRII | CCWGG | 1 cut(s) | 1845 |
| EcoT14I | CCWWGG | 3 cut(s) | 204, 577, 1709 |
| ErhI | CCWWGG | 3 cut(s) | 204, 577, 1709 |
| FaeI | CATG | 4 cut(s) | 277, 449, 878, 1713 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1622, 1654 |
| FaqI | GGGAC | 2 cut(s) | 770, 1494 |
| FatI | CATG | 4 cut(s) | 273, 445, 874, 1709 |
| FauI | CCCGC | 3 cut(s) | 739, 795, 1677 |
| FauNDI | CATATG | 2 cut(s) | 932, 1759 |
| Fnu4HI | GCNGC | 3 cut(s) | 462, 1782, 1800 |
| FokI | GGATG | 4 cut(s) | 221, 275, 1154, 1737 |
| Fsp4HI | GCNGC | 3 cut(s) | 462, 1782, 1800 |
| FspBI | CTAG | 5 cut(s) | 465, 588, 774, 1146, 1527 |
| FspI | TGCGCA | 1 cut(s) | 879 |
| GlaI | GCGC | 1 cut(s) | 879 |
| GluI | GCNGC | 3 cut(s) | 462, 1782, 1800 |
| GsaI | CCCAGC | 1 cut(s) | 1749 |
| GsuI | CTGGAG | 3 cut(s) | 389, 426, 1563 |
| HaeIII | GGCC | 4 cut(s) | 40, 179, 1094, 1310 |
| HapII | CCGG | 6 cut(s) | 19, 291, 519, 952, 1311, 1594 |
| HhaI | GCGC | 1 cut(s) | 880 |
| Hin1II | CATG | 4 cut(s) | 277, 449, 878, 1713 |
| Hin6I | GCGC | 1 cut(s) | 878 |
| HinP1I | GCGC | 1 cut(s) | 878 |
| HindIII | AAGCTT | 1 cut(s) | 95 |
| HinfI | GANTC | 6 cut(s) | 155, 1021, 1423, 1498, 1545, 1787 |
| HpaII | CCGG | 6 cut(s) | 19, 291, 519, 952, 1311, 1594 |
| HphI | GGTGA | 4 cut(s) | 563, 638, 920, 1250 |
| Hpy166II | GTNNAC | 4 cut(s) | 554, 901, 1289, 1841 |
| Hpy188I | TCNGA | 9 cut(s) | 193, 354, 532, 742, 1051, 1101, 1413, 1920, 1931 |
| Hpy188III | TCNNGA | 8 cut(s) | 19, 140, 306, 368, 519, 952, 1542, 1856 |
| Hpy8I | GTNNAC | 4 cut(s) | 554, 901, 1289, 1841 |
| Hpy99I | CGWCG | 1 cut(s) | 343 |
| HpyAV | CCTTC | 9 cut(s) | 289, 367, 462, 958, 1106, 1369, 1408, 1418, 1446 |
| HpyCH4III | ACNGT | 5 cut(s) | 360, 1477, 1561, 1610, 1916 |
| HpyCH4V | TGCA | 9 cut(s) | 11, 28, 563, 664, 1535, 1577, 1736, 1757, 1781 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 251, 886, 1085, 1307, 1742 |
| Hsp92II | CATG | 4 cut(s) | 277, 449, 878, 1713 |
| HspAI | GCGC | 1 cut(s) | 878 |
| Kpn2I | TCCGGA | 3 cut(s) | 18, 518, 951 |
| Kzo9I | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| LmnI | GCTCC | 3 cut(s) | 1101, 1331, 1807 |
| Lsp1109I | GCAGC | 2 cut(s) | 1786, 1793 |
| LweI | GCATC | 6 cut(s) | 232, 550, 876, 1132, 1586, 1859 |
| MaeI | CTAG | 5 cut(s) | 465, 588, 774, 1146, 1527 |
| MaeIII | GTNAC | 3 cut(s) | 666, 1381, 1420 |
| MalI | GATC | 5 cut(s) | 825, 846, 1053, 1592, 1894 |
| MbiI | CCGCTC | 1 cut(s) | 1692 |
| MboI | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| MfeI | CAATTG | 3 cut(s) | 608, 1695, 1809 |
| MflI | RGATCY | 3 cut(s) | 1051, 1590, 1892 |
| MlyI | GAGTC | 3 cut(s) | 164, 1417, 1554 |
| MmeI | TCCRAC | 1 cut(s) | 1192 |
| MroI | TCCGGA | 3 cut(s) | 18, 518, 951 |
| MroXI | GAANNNNTTC | 2 cut(s) | 526, 1791 |
| MseI | TTAA | 4 cut(s) | 234, 1031, 1277, 1389 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1723 |
| MspA1I | CMGCKG | 1 cut(s) | 1322 |
| MspI | CCGG | 6 cut(s) | 19, 291, 519, 952, 1311, 1594 |
| MspR9I | CCNGG | 4 cut(s) | 292, 1312, 1595, 1847 |
| MunI | CAATTG | 3 cut(s) | 608, 1695, 1809 |
| MvaI | CCWGG | 1 cut(s) | 1847 |
| MvnI | CGCG | 2 cut(s) | 790, 1827 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 251, 886, 1085, 1307, 1742 |
| NciI | CCSGG | 3 cut(s) | 292, 1312, 1595 |
| NcoI | CCATGG | 1 cut(s) | 1709 |
| NdeI | CATATG | 2 cut(s) | 932, 1759 |
| NdeII | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| NlaIII | CATG | 4 cut(s) | 277, 449, 878, 1713 |
| NlaIV | GGNNCC | 7 cut(s) | 23, 600, 786, 1103, 1309, 1688, 1879 |
| NmuCI | GTSAC | 3 cut(s) | 666, 1381, 1420 |
| NsbI | TGCGCA | 1 cut(s) | 879 |
| NspV | TTCGAA | 1 cut(s) | 1165 |
| PdmI | GAANNNNTTC | 2 cut(s) | 526, 1791 |
| PfeI | GAWTC | 3 cut(s) | 1021, 1498, 1787 |
| PfoI | TCCNGGA | 1 cut(s) | 290 |
| PkrI | GCNGC | 3 cut(s) | 463, 1783, 1801 |
| PleI | GAGTC | 3 cut(s) | 163, 1417, 1553 |
| PpsI | GAGTC | 3 cut(s) | 163, 1417, 1553 |
| PpuMI | RGGWCCY | 1 cut(s) | 784 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1071 |
| Psp5II | RGGWCCY | 1 cut(s) | 784 |
| Psp6I | CCWGG | 1 cut(s) | 1845 |
| PspFI | CCCAGC | 1 cut(s) | 1745 |
| PspGI | CCWGG | 1 cut(s) | 1845 |
| PspN4I | GGNNCC | 7 cut(s) | 23, 600, 786, 1103, 1309, 1688, 1879 |
| PspPI | GGNCC | 7 cut(s) | 16, 39, 178, 784, 1093, 1308, 1687 |
| PspPPI | RGGWCCY | 1 cut(s) | 784 |
| PstNI | CAGNNNCTG | 1 cut(s) | 352 |
| PsuI | RGATCY | 3 cut(s) | 1051, 1590, 1892 |
| RsaI | GTAC | 5 cut(s) | 51, 90, 695, 1887, 1913 |
| RsaNI | GTAC | 5 cut(s) | 50, 89, 694, 1886, 1912 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1723 |
| SaqAI | TTAA | 4 cut(s) | 234, 1031, 1277, 1389 |
| SatI | GCNGC | 3 cut(s) | 462, 1782, 1800 |
| Sau3AI | GATC | 5 cut(s) | 823, 844, 1051, 1590, 1892 |
| Sau96I | GGNCC | 7 cut(s) | 16, 39, 178, 784, 1093, 1308, 1687 |
| SchI | GAGTC | 3 cut(s) | 164, 1417, 1554 |
| ScrFI | CCNGG | 4 cut(s) | 292, 1312, 1595, 1847 |
| SfaNI | GCATC | 6 cut(s) | 232, 550, 876, 1132, 1586, 1859 |
| SfcI | CTRYAG | 1 cut(s) | 915 |
| SfuI | TTCGAA | 1 cut(s) | 1165 |
| SinI | GGWCC | 3 cut(s) | 16, 784, 1687 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1723 |
| SspMI | CTAG | 5 cut(s) | 465, 588, 774, 1146, 1527 |
| StyD4I | CCNGG | 4 cut(s) | 290, 1310, 1593, 1845 |
| StyI | CCWWGG | 3 cut(s) | 204, 577, 1709 |
| TaaI | ACNGT | 5 cut(s) | 360, 1477, 1561, 1610, 1916 |
| TaqI | TCGA | 4 cut(s) | 963, 997, 1165, 1403 |
| TatI | WGTACW | 2 cut(s) | 1885, 1911 |
| TauI | GCSGC | 1 cut(s) | 464 |
| TfiI | GAWTC | 3 cut(s) | 1021, 1498, 1787 |
| Tru1I | TTAA | 4 cut(s) | 234, 1031, 1277, 1389 |
| Tru9I | TTAA | 4 cut(s) | 234, 1031, 1277, 1389 |
| TscAI | CASTG | 5 cut(s) | 570, 1178, 1482, 1615, 1627 |
| TseFI | GTSAC | 3 cut(s) | 666, 1381, 1420 |
| TseI | GCWGC | 2 cut(s) | 1781, 1799 |
| Tsp45I | GTSAC | 3 cut(s) | 666, 1381, 1420 |
| TspDTI | ATGAA | 4 cut(s) | 96, 434, 615, 1388 |
| TspGWI | ACGGA | 3 cut(s) | 167, 504, 681 |
| TspRI | CASTG | 5 cut(s) | 570, 1178, 1482, 1615, 1627 |
| VpaK11BI | GGWCC | 3 cut(s) | 16, 784, 1687 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1373, 1412 |
| XapI | RAATTY | 2 cut(s) | 509, 1830 |
| XmnI | GAANNNNTTC | 2 cut(s) | 526, 1791 |
| XspI | CTAG | 5 cut(s) | 465, 588, 774, 1146, 1527 |