No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43250 |
| fragaria_vesca | FvH4_7g14000 |
| malus_domestica | MD01G1056400.v1.1 MD01G1056500.v1.1 MD07G1139400.v1.1 |
| prunus_persica | Prupe.2G167200_v2.0.a1 |
| pyrus_communis | pycom01g08200 pycom01g08280 pycom01g08450 pycom07g13680 pycom07g13720 |
| rosa_chinensis | RchiOBHm_Chr1g0354651 |
| rosa_laevigata | RLG00000028191 |
| rosa_multiflora | Rmu_co8354095.1_g000001 Rmu_sc0006632.1_g000012 Rmu_sc0013673.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00300870 |
| rosa_rugosa | Rorug01G0243700 |
| rosa_samantha | Rh1AG254900 Rh1BG225500 Rh1CG238000 Rh1DG253500 |
| rosa_wichuraiana | Rw1G022300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 349 |
| Acc16I | TGCGCA | 2 cut(s) | 357, 981 |
| Acc36I | ACCTGC | 3 cut(s) | 349, 1250, 1777 |
| AccB1I | GGYRCC | 1 cut(s) | 1979 |
| AccI | GTMKAC | 1 cut(s) | 1099 |
| AccIII | TCCGGA | 2 cut(s) | 120, 841 |
| AciI | CCGC | 6 cut(s) | 236, 347, 563, 890, 1375, 1424 |
| AcsI | RAATTY | 3 cut(s) | 611, 628, 1077 |
| AcuI | CTGAAG | 3 cut(s) | 191, 402, 1036 |
| AcyI | GRCGYC | 1 cut(s) | 1952 |
| AfaI | GTAC | 4 cut(s) | 153, 192, 1989, 2015 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 36, 84, 848, 959, 1516, 1813 |
| AflII | CTTAAG | 1 cut(s) | 1558 |
| AhlI | ACTAGT | 1 cut(s) | 14 |
| AjnI | CCWGG | 1 cut(s) | 1627 |
| AluBI | AGCT | 7 cut(s) | 578, 974, 1016, 1321, 1740, 1886, 1904 |
| AluI | AGCT | 7 cut(s) | 578, 974, 1016, 1321, 1740, 1886, 1904 |
| Alw26I | GTCTC | 3 cut(s) | 245, 1441, 1959 |
| Aor13HI | TCCGGA | 2 cut(s) | 120, 841 |
| AoxI | GGCC | 3 cut(s) | 140, 1194, 1410 |
| ApeKI | GCWGC | 2 cut(s) | 1883, 1901 |
| ApoI | RAATTY | 3 cut(s) | 611, 628, 1077 |
| AseI | ATTAAT | 1 cut(s) | 1110 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 628 |
| AspLEI | GCGC | 2 cut(s) | 358, 982 |
| AspS9I | GGNCC | 6 cut(s) | 118, 141, 886, 1195, 1410, 1789 |
| AsuC2I | CCSGG | 3 cut(s) | 38, 1414, 1849 |
| AsuHPI | GGTGA | 6 cut(s) | 650, 665, 740, 790, 1022, 1352 |
| AsuII | TTCGAA | 2 cut(s) | 737, 1267 |
| AvaII | GGWCC | 3 cut(s) | 118, 886, 1789 |
| AxyI | CCTNAGG | 1 cut(s) | 649 |
| BanI | GGYRCC | 1 cut(s) | 1979 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BbsI | GAAGAC | 2 cut(s) | 1256, 1739 |
| BbvI | GCAGC | 2 cut(s) | 1895, 1913 |
| BccI | CCATC | 7 cut(s) | 407, 629, 769, 961, 1862, 1915, 1970 |
| BceAI | ACGGC | 1 cut(s) | 1799 |
| BciT130I | CCWGG | 1 cut(s) | 1629 |
| BciVI | GTATCC | 1 cut(s) | 637 |
| BcnI | CCSGG | 3 cut(s) | 38, 1414, 1849 |
| BcoDI | GTCTC | 3 cut(s) | 245, 1441, 1959 |
| BcuI | ACTAGT | 1 cut(s) | 14 |
| BfaI | CTAG | 7 cut(s) | 15, 567, 690, 876, 971, 1248, 1295 |
| BfmI | CTRYAG | 3 cut(s) | 128, 1017, 1899 |
| BfrI | CTTAAG | 1 cut(s) | 1558 |
| BfuAI | ACCTGC | 3 cut(s) | 349, 1250, 1777 |
| BfuI | GTATCC | 1 cut(s) | 637 |
| BglII | AGATCT | 1 cut(s) | 1994 |
| BisI | GCNGC | 3 cut(s) | 564, 1884, 1902 |
| BlsI | GCNGC | 3 cut(s) | 565, 1885, 1903 |
| BmcAI | AGTACT | 1 cut(s) | 153 |
| Bme1390I | CCNGG | 4 cut(s) | 38, 1414, 1629, 1849 |
| Bme18I | GGWCC | 3 cut(s) | 118, 886, 1789 |
| BmgT120I | GGNCC | 6 cut(s) | 118, 141, 886, 1195, 1410, 1789 |
| BmiI | GGNNCC | 6 cut(s) | 125, 702, 888, 1205, 1411, 1981 |
| BmrFI | CCNGG | 4 cut(s) | 38, 1414, 1629, 1849 |
| BmsI | GCATC | 6 cut(s) | 82, 334, 652, 978, 1234, 1956 |
| BpiI | GAAGAC | 2 cut(s) | 1256, 1739 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 632, 664 |
| BpmI | CTGGAG | 2 cut(s) | 491, 1665 |
| Bpu14I | TTCGAA | 2 cut(s) | 737, 1267 |
| BpuEI | CTTGAG | 1 cut(s) | 564 |
| BpuMI | CCSGG | 3 cut(s) | 38, 1414, 1849 |
| BsaHI | GRCGYC | 1 cut(s) | 1952 |
| BsaJI | CCNNGG | 3 cut(s) | 679, 1413, 1811 |
| BsaWI | WCCGGW | 3 cut(s) | 120, 160, 841 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 501, 531, 836, 866 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 36, 84, 848, 959, 1516, 1813 |
| Bse1I | ACTGG | 4 cut(s) | 831, 1160, 1722, 1917 |
| Bse21I | CCTNAGG | 1 cut(s) | 649 |
| Bse3DI | GCAATG | 2 cut(s) | 351, 1755 |
| BseAI | TCCGGA | 2 cut(s) | 120, 841 |
| BseBI | CCWGG | 1 cut(s) | 1629 |
| BseDI | CCNNGG | 3 cut(s) | 679, 1413, 1811 |
| BseGI | GGATG | 5 cut(s) | 169, 316, 370, 1249, 1832 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 36, 84, 848, 959, 1516, 1813 |
| BseMI | GCAATG | 2 cut(s) | 351, 1755 |
| BseMII | CTCAG | 9 cut(s) | 240, 384, 441, 663, 1064, 1134, 1677, 1719, 1970 |
| BseNI | ACTGG | 4 cut(s) | 831, 1160, 1722, 1917 |
| BseXI | GCAGC | 2 cut(s) | 1895, 1913 |
| BsgI | GTGCAG | 2 cut(s) | 785, 1902 |
| BshFI | GGCC | 3 cut(s) | 142, 1196, 1412 |
| BshNI | GGYRCC | 1 cut(s) | 1979 |
| BsiSI | CCGG | 6 cut(s) | 37, 121, 161, 842, 1413, 1848 |
| BslFI | GGGAC | 2 cut(s) | 872, 1596 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 36, 84, 848, 959, 1516, 1813 |
| BsmAI | GTCTC | 3 cut(s) | 245, 1441, 1959 |
| BsmBI | CGTCTC | 2 cut(s) | 245, 1959 |
| BsmFI | GGGAC | 2 cut(s) | 872, 1596 |
| BsnI | GGCC | 3 cut(s) | 142, 1196, 1412 |
| Bsp119I | TTCGAA | 2 cut(s) | 737, 1267 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp13I | TCCGGA | 2 cut(s) | 120, 841 |
| Bsp1407I | TGTACA | 1 cut(s) | 2013 |
| Bsp143I | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| Bsp19I | CCATGG | 1 cut(s) | 1811 |
| BspACI | CCGC | 6 cut(s) | 236, 347, 563, 890, 1375, 1424 |
| BspANI | GGCC | 3 cut(s) | 142, 1196, 1412 |
| BspCNI | CTCAG | 9 cut(s) | 241, 385, 440, 662, 1065, 1135, 1678, 1720, 1969 |
| BspEI | TCCGGA | 2 cut(s) | 120, 841 |
| BspLI | GGNNCC | 6 cut(s) | 125, 702, 888, 1205, 1411, 1981 |
| BspMAI | CTGCAG | 1 cut(s) | 1903 |
| BspMI | ACCTGC | 3 cut(s) | 349, 1250, 1777 |
| BspQI | GCTCTTC | 1 cut(s) | 57 |
| BspT104I | TTCGAA | 2 cut(s) | 737, 1267 |
| BspT107I | GGYRCC | 1 cut(s) | 1979 |
| BspTI | CTTAAG | 1 cut(s) | 1558 |
| BsrDI | GCAATG | 2 cut(s) | 351, 1755 |
| BsrGI | TGTACA | 1 cut(s) | 2013 |
| BsrI | ACTGG | 4 cut(s) | 831, 1160, 1722, 1917 |
| BssECI | CCNNGG | 3 cut(s) | 679, 1413, 1811 |
| BssMI | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| BssNI | GRCGYC | 1 cut(s) | 1952 |
| BssT1I | CCWWGG | 2 cut(s) | 679, 1811 |
| Bst2UI | CCWGG | 1 cut(s) | 1629 |
| Bst4CI | ACNGT | 4 cut(s) | 1579, 1663, 1712, 2018 |
| Bst6I | CTCTTC | 6 cut(s) | 57, 75, 392, 734, 1190, 1444 |
| BstACI | GRCGYC | 1 cut(s) | 1952 |
| BstAFI | CTTAAG | 1 cut(s) | 1558 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 988, 1844 |
| BstAUI | TGTACA | 1 cut(s) | 2013 |
| BstBI | TTCGAA | 2 cut(s) | 737, 1267 |
| BstDSI | CCRYGG | 1 cut(s) | 1811 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| BstF5I | GGATG | 5 cut(s) | 169, 316, 370, 1249, 1832 |
| BstHHI | GCGC | 2 cut(s) | 358, 982 |
| BstKTI | GATC | 4 cut(s) | 928, 949, 1156, 1997 |
| BstMAI | GTCTC | 3 cut(s) | 245, 1441, 1959 |
| BstMBI | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 353, 988, 1409, 1844, 1892, 1901 |
| BstNI | CCWGG | 1 cut(s) | 1629 |
| BstSCI | CCNGG | 4 cut(s) | 36, 1412, 1627, 1847 |
| BstSFI | CTRYAG | 3 cut(s) | 128, 1017, 1899 |
| BstV1I | GCAGC | 2 cut(s) | 1895, 1913 |
| BstV2I | GAAGAC | 2 cut(s) | 1256, 1739 |
| BstX2I | RGATCY | 1 cut(s) | 1994 |
| BstYI | RGATCY | 1 cut(s) | 1994 |
| Bsu36I | CCTNAGG | 1 cut(s) | 649 |
| BsuI | GTATCC | 1 cut(s) | 637 |
| BsuRI | GGCC | 3 cut(s) | 142, 1196, 1412 |
| BtgI | CCRYGG | 1 cut(s) | 1811 |
| BtsCI | GGATG | 5 cut(s) | 169, 316, 370, 1249, 1832 |
| BtsI | GCAGTG | 1 cut(s) | 672 |
| BtsIMutI | CAGTG | 4 cut(s) | 672, 1584, 1717, 1729 |
| BveI | ACCTGC | 3 cut(s) | 349, 1250, 1777 |
| CfoI | GCGC | 2 cut(s) | 358, 982 |
| Cfr13I | GGNCC | 6 cut(s) | 118, 141, 886, 1195, 1410, 1789 |
| CseI | GACGC | 2 cut(s) | 1668, 1941 |
| Csp6I | GTAC | 4 cut(s) | 152, 191, 1988, 2014 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 693, 728 |
| CviAII | CATG | 4 cut(s) | 376, 548, 977, 1812 |
| CviQI | GTAC | 4 cut(s) | 152, 191, 1988, 2014 |
| DpnI | GATC | 4 cut(s) | 927, 948, 1155, 1996 |
| DpnII | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| Eam1104I | CTCTTC | 6 cut(s) | 57, 75, 392, 734, 1190, 1444 |
| EarI | CTCTTC | 6 cut(s) | 57, 75, 392, 734, 1190, 1444 |
| Eco130I | CCWWGG | 2 cut(s) | 679, 1811 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco32I | GATATC | 1 cut(s) | 805 |
| Eco47I | GGWCC | 3 cut(s) | 118, 886, 1789 |
| Eco57I | CTGAAG | 3 cut(s) | 191, 402, 1036 |
| Eco81I | CCTNAGG | 1 cut(s) | 649 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| EcoO109I | RGGNCCY | 2 cut(s) | 886, 1195 |
| EcoRII | CCWGG | 1 cut(s) | 1627 |
| EcoRV | GATATC | 1 cut(s) | 805 |
| EcoT14I | CCWWGG | 2 cut(s) | 679, 1811 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| ErhI | CCWWGG | 2 cut(s) | 679, 1811 |
| Esp3I | CGTCTC | 2 cut(s) | 245, 1959 |
| FaeI | CATG | 4 cut(s) | 379, 551, 980, 1815 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1724, 1756 |
| FaqI | GGGAC | 2 cut(s) | 872, 1596 |
| FatI | CATG | 4 cut(s) | 375, 547, 976, 1811 |
| FauI | CCCGC | 1 cut(s) | 897 |
| FblI | GTMKAC | 1 cut(s) | 1099 |
| Fnu4HI | GCNGC | 3 cut(s) | 564, 1884, 1902 |
| FokI | GGATG | 5 cut(s) | 176, 323, 377, 1256, 1839 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 3 cut(s) | 564, 1884, 1902 |
| FspBI | CTAG | 7 cut(s) | 15, 567, 690, 876, 971, 1248, 1295 |
| FspI | TGCGCA | 2 cut(s) | 357, 981 |
| GlaI | GCGC | 2 cut(s) | 357, 981 |
| GluI | GCNGC | 3 cut(s) | 564, 1884, 1902 |
| GsuI | CTGGAG | 2 cut(s) | 491, 1665 |
| HaeIII | GGCC | 3 cut(s) | 142, 1196, 1412 |
| HapII | CCGG | 6 cut(s) | 37, 121, 161, 842, 1413, 1848 |
| HgaI | GACGC | 2 cut(s) | 1668, 1941 |
| HhaI | GCGC | 2 cut(s) | 358, 982 |
| Hin1I | GRCGYC | 1 cut(s) | 1952 |
| Hin1II | CATG | 4 cut(s) | 379, 551, 980, 1815 |
| Hin6I | GCGC | 2 cut(s) | 356, 980 |
| HinP1I | GCGC | 2 cut(s) | 356, 980 |
| HincII | GTYRAC | 1 cut(s) | 1100 |
| HindII | GTYRAC | 1 cut(s) | 1100 |
| HpaII | CCGG | 6 cut(s) | 37, 121, 161, 842, 1413, 1848 |
| HphI | GGTGA | 6 cut(s) | 650, 665, 740, 790, 1022, 1352 |
| Hpy166II | GTNNAC | 5 cut(s) | 656, 1003, 1100, 1391, 1943 |
| Hpy188I | TCNGA | 9 cut(s) | 21, 79, 295, 394, 456, 634, 1153, 1203, 2033 |
| Hpy8I | GTNNAC | 5 cut(s) | 656, 1003, 1100, 1391, 1943 |
| Hpy99I | CGWCG | 1 cut(s) | 445 |
| HpyAV | CCTTC | 7 cut(s) | 469, 564, 1060, 1208, 1471, 1510, 1548 |
| HpyCH4III | ACNGT | 4 cut(s) | 1579, 1663, 1712, 2018 |
| HpyCH4IV | ACGT | 1 cut(s) | 1820 |
| HpyCH4V | TGCA | 8 cut(s) | 506, 665, 766, 1637, 1838, 1883, 1901, 1969 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 353, 988, 1409, 1844, 1892, 1901 |
| HpySE526I | ACGT | 1 cut(s) | 1820 |
| Hsp92I | GRCGYC | 1 cut(s) | 1952 |
| Hsp92II | CATG | 4 cut(s) | 379, 551, 980, 1815 |
| HspAI | GCGC | 2 cut(s) | 356, 980 |
| Kpn2I | TCCGGA | 2 cut(s) | 120, 841 |
| Kzo9I | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| LguI | GCTCTTC | 1 cut(s) | 57 |
| LmnI | GCTCC | 4 cut(s) | 730, 1203, 1900, 1909 |
| Lsp1109I | GCAGC | 2 cut(s) | 1895, 1913 |
| LweI | GCATC | 6 cut(s) | 82, 334, 652, 978, 1234, 1956 |
| MaeI | CTAG | 7 cut(s) | 15, 567, 690, 876, 971, 1248, 1295 |
| MaeII | ACGT | 1 cut(s) | 1820 |
| MaeIII | GTNAC | 5 cut(s) | 10, 768, 878, 1483, 1522 |
| MalI | GATC | 4 cut(s) | 927, 948, 1155, 1996 |
| MboI | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| MfeI | CAATTG | 2 cut(s) | 710, 1911 |
| MflI | RGATCY | 1 cut(s) | 1994 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MlyI | GAGTC | 7 cut(s) | 83, 266, 508, 1443, 1519, 1656, 1997 |
| MmeI | TCCRAC | 1 cut(s) | 1294 |
| MroI | TCCGGA | 2 cut(s) | 120, 841 |
| MroXI | GAANNNNTTC | 1 cut(s) | 628 |
| MseI | TTAA | 4 cut(s) | 1110, 1133, 1379, 1559 |
| MspA1I | CMGCKG | 2 cut(s) | 1424, 1886 |
| MspCI | CTTAAG | 1 cut(s) | 1558 |
| MspI | CCGG | 6 cut(s) | 37, 121, 161, 842, 1413, 1848 |
| MspR9I | CCNGG | 4 cut(s) | 38, 1414, 1629, 1849 |
| MunI | CAATTG | 2 cut(s) | 710, 1911 |
| MvaI | CCWGG | 1 cut(s) | 1629 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 353, 988, 1409, 1844, 1892, 1901 |
| NciI | CCSGG | 3 cut(s) | 38, 1414, 1849 |
| NcoI | CCATGG | 1 cut(s) | 1811 |
| NdeII | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| NlaIII | CATG | 4 cut(s) | 379, 551, 980, 1815 |
| NlaIV | GGNNCC | 6 cut(s) | 125, 702, 888, 1205, 1411, 1981 |
| NmuCI | GTSAC | 3 cut(s) | 768, 1483, 1522 |
| NsbI | TGCGCA | 2 cut(s) | 357, 981 |
| NspV | TTCGAA | 2 cut(s) | 737, 1267 |
| PaqCI | CACCTGC | 1 cut(s) | 349 |
| PciSI | GCTCTTC | 1 cut(s) | 57 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1789 |
| PdmI | GAANNNNTTC | 1 cut(s) | 628 |
| PfeI | GAWTC | 6 cut(s) | 47, 1123, 1600, 1693, 1889, 1933 |
| PflFI | GACNNNGTC | 1 cut(s) | 256 |
| PkrI | GCNGC | 3 cut(s) | 565, 1885, 1903 |
| PleI | GAGTC | 7 cut(s) | 82, 265, 507, 1442, 1519, 1655, 1997 |
| PpsI | GAGTC | 7 cut(s) | 82, 265, 507, 1442, 1519, 1655, 1997 |
| PpuMI | RGGWCCY | 1 cut(s) | 886 |
| PshBI | ATTAAT | 1 cut(s) | 1110 |
| Psp5II | RGGWCCY | 1 cut(s) | 886 |
| Psp6I | CCWGG | 1 cut(s) | 1627 |
| PspGI | CCWGG | 1 cut(s) | 1627 |
| PspN4I | GGNNCC | 6 cut(s) | 125, 702, 888, 1205, 1411, 1981 |
| PspPI | GGNCC | 6 cut(s) | 118, 141, 886, 1195, 1410, 1789 |
| PspPPI | RGGWCCY | 1 cut(s) | 886 |
| PstI | CTGCAG | 1 cut(s) | 1903 |
| PsuI | RGATCY | 1 cut(s) | 1994 |
| PsyI | GACNNNGTC | 1 cut(s) | 256 |
| PvuII | CAGCTG | 1 cut(s) | 1886 |
| RsaI | GTAC | 4 cut(s) | 153, 192, 1989, 2015 |
| RsaNI | GTAC | 4 cut(s) | 152, 191, 1988, 2014 |
| SalI | GTCGAC | 1 cut(s) | 1098 |
| SapI | GCTCTTC | 1 cut(s) | 57 |
| SaqAI | TTAA | 4 cut(s) | 1110, 1133, 1379, 1559 |
| SatI | GCNGC | 3 cut(s) | 564, 1884, 1902 |
| Sau3AI | GATC | 4 cut(s) | 925, 946, 1153, 1994 |
| Sau96I | GGNCC | 6 cut(s) | 118, 141, 886, 1195, 1410, 1789 |
| ScaI | AGTACT | 1 cut(s) | 153 |
| SchI | GAGTC | 7 cut(s) | 83, 266, 508, 1443, 1519, 1656, 1997 |
| ScrFI | CCNGG | 4 cut(s) | 38, 1414, 1629, 1849 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 6 cut(s) | 82, 334, 652, 978, 1234, 1956 |
| SfcI | CTRYAG | 3 cut(s) | 128, 1017, 1899 |
| SfuI | TTCGAA | 2 cut(s) | 737, 1267 |
| SinI | GGWCC | 3 cut(s) | 118, 886, 1789 |
| SmlI | CTYRAG | 2 cut(s) | 579, 1558 |
| SmoI | CTYRAG | 2 cut(s) | 579, 1558 |
| SpeI | ACTAGT | 1 cut(s) | 14 |
| SsiI | CCGC | 6 cut(s) | 236, 347, 563, 890, 1375, 1424 |
| SspMI | CTAG | 7 cut(s) | 15, 567, 690, 876, 971, 1248, 1295 |
| StyD4I | CCNGG | 4 cut(s) | 36, 1412, 1627, 1847 |
| StyI | CCWWGG | 2 cut(s) | 679, 1811 |
| TaaI | ACNGT | 4 cut(s) | 1579, 1663, 1712, 2018 |
| TaiI | ACGT | 1 cut(s) | 1823 |
| TatI | WGTACW | 3 cut(s) | 151, 1987, 2013 |
| TauI | GCSGC | 1 cut(s) | 566 |
| TfiI | GAWTC | 6 cut(s) | 47, 1123, 1600, 1693, 1889, 1933 |
| Tru1I | TTAA | 4 cut(s) | 1110, 1133, 1379, 1559 |
| Tru9I | TTAA | 4 cut(s) | 1110, 1133, 1379, 1559 |
| TscAI | CASTG | 4 cut(s) | 672, 1584, 1717, 1729 |
| TseFI | GTSAC | 3 cut(s) | 768, 1483, 1522 |
| TseI | GCWGC | 2 cut(s) | 1883, 1901 |
| Tsp45I | GTSAC | 3 cut(s) | 768, 1483, 1522 |
| TspDTI | ATGAA | 3 cut(s) | 198, 536, 1490 |
| TspGWI | ACGGA | 3 cut(s) | 269, 606, 1781 |
| TspRI | CASTG | 4 cut(s) | 672, 1584, 1717, 1729 |
| Tth111I | GACNNNGTC | 1 cut(s) | 256 |
| Vha464I | CTTAAG | 1 cut(s) | 1558 |
| VpaK11BI | GGWCC | 3 cut(s) | 118, 886, 1789 |
| VspI | ATTAAT | 1 cut(s) | 1110 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1514 |
| XapI | RAATTY | 3 cut(s) | 611, 628, 1077 |
| XbaI | TCTAGA | 1 cut(s) | 1294 |
| XmiI | GTMKAC | 1 cut(s) | 1099 |
| XmnI | GAANNNNTTC | 1 cut(s) | 628 |
| XspI | CTAG | 7 cut(s) | 15, 567, 690, 876, 971, 1248, 1295 |
| ZrmI | AGTACT | 1 cut(s) | 153 |