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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43250 |
| fragaria_vesca | FvH4_7g14000 |
| malus_domestica | MD01G1056400.v1.1 MD01G1056500.v1.1 MD07G1139400.v1.1 |
| prunus_persica | Prupe.2G167200_v2.0.a1 |
| pyrus_communis | pycom01g08200 pycom01g08280 pycom01g08450 pycom07g13680 pycom07g13720 |
| rosa_chinensis | RchiOBHm_Chr1g0354651 |
| rosa_laevigata | RLG00000028191 |
| rosa_multiflora | Rmu_co8354095.1_g000001 Rmu_sc0006632.1_g000012 Rmu_sc0013673.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00300870 |
| rosa_rugosa | Rorug01G0243700 |
| rosa_samantha | Rh1AG254900 Rh1BG225500 Rh1CG238000 Rh1DG253500 |
| rosa_wichuraiana | Rw1G022300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1052, 1681 |
| AccI | GTMKAC | 1 cut(s) | 846 |
| AccIII | TCCGGA | 1 cut(s) | 855 |
| AciI | CCGC | 2 cut(s) | 1037, 1177 |
| AclWI | GGATC | 2 cut(s) | 735, 1462 |
| AcsI | RAATTY | 3 cut(s) | 282, 879, 1714 |
| AcuI | CTGAAG | 2 cut(s) | 312, 861 |
| AfaI | GTAC | 3 cut(s) | 90, 105, 1790 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 760, 761, 1588 |
| AjnI | CCWGG | 3 cut(s) | 255, 1402, 1722 |
| Alw21I | GWGCWC | 1 cut(s) | 784 |
| Alw26I | GTCTC | 1 cut(s) | 290 |
| Alw44I | GTGCAC | 1 cut(s) | 780 |
| AlwI | GGATC | 2 cut(s) | 735, 1462 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 107 |
| Aor13HI | TCCGGA | 1 cut(s) | 855 |
| AoxI | GGCC | 4 cut(s) | 38, 687, 996, 1381 |
| ApaLI | GTGCAC | 1 cut(s) | 780 |
| ApeKI | GCWGC | 8 cut(s) | 1005, 1475, 1478, 1496, 1499, 1561, 1658, 1676 |
| ApoI | RAATTY | 3 cut(s) | 282, 879, 1714 |
| AseI | ATTAAT | 1 cut(s) | 912 |
| AspS9I | GGNCC | 4 cut(s) | 39, 688, 997, 1382 |
| AsuC2I | CCSGG | 1 cut(s) | 1624 |
| AsuHPI | GGTGA | 1 cut(s) | 824 |
| BaeGI | GKGCMC | 1 cut(s) | 784 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 816, 849 |
| BbsI | GAAGAC | 2 cut(s) | 483, 1514 |
| Bbv12I | GWGCWC | 1 cut(s) | 784 |
| BbvI | GCAGC | 8 cut(s) | 1017, 1465, 1483, 1486, 1487, 1573, 1645, 1688 |
| BccI | CCATC | 6 cut(s) | 305, 667, 763, 1393, 1637, 1690 |
| BceAI | ACGGC | 2 cut(s) | 119, 1574 |
| BciT130I | CCWGG | 3 cut(s) | 257, 1404, 1724 |
| BcnI | CCSGG | 1 cut(s) | 1624 |
| BcoDI | GTCTC | 1 cut(s) | 290 |
| BfaI | CTAG | 4 cut(s) | 588, 773, 1050, 1512 |
| BfmI | CTRYAG | 3 cut(s) | 819, 1029, 1674 |
| BfuAI | ACCTGC | 2 cut(s) | 1052, 1681 |
| BglII | AGATCT | 1 cut(s) | 426 |
| BisI | GCNGC | 9 cut(s) | 1006, 1178, 1476, 1479, 1497, 1500, 1562, 1659, 1677 |
| BlsI | GCNGC | 9 cut(s) | 1007, 1179, 1477, 1480, 1498, 1501, 1563, 1660, 1678 |
| Bme1390I | CCNGG | 4 cut(s) | 257, 1404, 1624, 1724 |
| BmgT120I | GGNCC | 4 cut(s) | 39, 688, 997, 1382 |
| BmiI | GGNNCC | 5 cut(s) | 23, 144, 600, 690, 1237 |
| BmrFI | CCNGG | 4 cut(s) | 257, 1404, 1624, 1724 |
| BmsI | GCATC | 4 cut(s) | 199, 232, 1036, 1736 |
| BpiI | GAAGAC | 2 cut(s) | 483, 1514 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 530, 562 |
| BpmI | CTGGAG | 5 cut(s) | 389, 1118, 1386, 1440, 1550 |
| Bpu10I | CCTNAGC | 1 cut(s) | 477 |
| BpuEI | CTTGAG | 1 cut(s) | 532 |
| BpuMI | CCSGG | 1 cut(s) | 1624 |
| BsaI | GGTCTC | 1 cut(s) | 290 |
| BsaJI | CCNNGG | 4 cut(s) | 255, 577, 1378, 1586 |
| BsaWI | WCCGGW | 1 cut(s) | 855 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 473, 503, 1548, 1578 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 760, 761, 1588 |
| Bse1I | ACTGG | 4 cut(s) | 101, 962, 1082, 1692 |
| BseAI | TCCGGA | 1 cut(s) | 855 |
| BseBI | CCWGG | 3 cut(s) | 257, 1404, 1724 |
| BseDI | CCNNGG | 4 cut(s) | 255, 577, 1378, 1586 |
| BseGI | GGATG | 3 cut(s) | 214, 795, 1051 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 760, 761, 1588 |
| BseMII | CTCAG | 8 cut(s) | 167, 339, 491, 866, 945, 1452, 1494, 1745 |
| BseNI | ACTGG | 4 cut(s) | 101, 962, 1082, 1692 |
| BseSI | GKGCMC | 1 cut(s) | 784 |
| BseXI | GCAGC | 8 cut(s) | 1017, 1465, 1483, 1486, 1487, 1573, 1645, 1688 |
| BshFI | GGCC | 4 cut(s) | 40, 689, 998, 1383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 784 |
| BsiSI | CCGG | 3 cut(s) | 146, 856, 1623 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 760, 761, 1588 |
| BsmAI | GTCTC | 1 cut(s) | 290 |
| BsmI | GAATGC | 1 cut(s) | 1535 |
| BsnI | GGCC | 4 cut(s) | 40, 689, 998, 1383 |
| Bso31I | GGTCTC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 784 |
| Bsp13I | TCCGGA | 1 cut(s) | 855 |
| Bsp1407I | TGTACA | 1 cut(s) | 1788 |
| Bsp143I | GATC | 3 cut(s) | 426, 727, 1467 |
| BspACI | CCGC | 2 cut(s) | 1037, 1177 |
| BspANI | GGCC | 4 cut(s) | 40, 689, 998, 1383 |
| BspCNI | CTCAG | 8 cut(s) | 166, 338, 490, 867, 946, 1453, 1495, 1744 |
| BspEI | TCCGGA | 1 cut(s) | 855 |
| BspLI | GGNNCC | 5 cut(s) | 23, 144, 600, 690, 1237 |
| BspMAI | CTGCAG | 1 cut(s) | 1678 |
| BspMI | ACCTGC | 2 cut(s) | 1052, 1681 |
| BspPI | GGATC | 2 cut(s) | 735, 1462 |
| BspTNI | GGTCTC | 1 cut(s) | 290 |
| BsrGI | TGTACA | 1 cut(s) | 1788 |
| BsrI | ACTGG | 4 cut(s) | 101, 962, 1082, 1692 |
| BssECI | CCNNGG | 4 cut(s) | 255, 577, 1378, 1586 |
| BssMI | GATC | 3 cut(s) | 426, 727, 1467 |
| BssT1I | CCWWGG | 2 cut(s) | 577, 1378 |
| Bst2UI | CCWGG | 3 cut(s) | 257, 1404, 1724 |
| Bst4CI | ACNGT | 5 cut(s) | 123, 274, 301, 1354, 1587 |
| Bst6I | CTCTTC | 2 cut(s) | 288, 1246 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 209, 1619 |
| BstAUI | TGTACA | 1 cut(s) | 1788 |
| BstDSI | CCRYGG | 1 cut(s) | 1586 |
| BstF5I | GGATG | 3 cut(s) | 214, 795, 1051 |
| BstKTI | GATC | 3 cut(s) | 429, 730, 1470 |
| BstMAI | GTCTC | 1 cut(s) | 290 |
| BstMBI | GATC | 3 cut(s) | 426, 727, 1467 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 209, 511, 1211, 1619 |
| BstNI | CCWGG | 3 cut(s) | 257, 1404, 1724 |
| BstSCI | CCNGG | 4 cut(s) | 255, 1402, 1622, 1722 |
| BstSFI | CTRYAG | 3 cut(s) | 819, 1029, 1674 |
| BstSLI | GKGCMC | 1 cut(s) | 784 |
| BstV1I | GCAGC | 8 cut(s) | 1017, 1465, 1483, 1486, 1487, 1573, 1645, 1688 |
| BstV2I | GAAGAC | 2 cut(s) | 483, 1514 |
| BstX2I | RGATCY | 3 cut(s) | 426, 727, 1467 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 472 |
| BstYI | RGATCY | 3 cut(s) | 426, 727, 1467 |
| BsuRI | GGCC | 4 cut(s) | 40, 689, 998, 1383 |
| BtgI | CCRYGG | 1 cut(s) | 1586 |
| BtsCI | GGATG | 3 cut(s) | 214, 795, 1051 |
| BtsI | GCAGTG | 1 cut(s) | 570 |
| BtsIMutI | CAGTG | 2 cut(s) | 570, 1075 |
| BveI | ACCTGC | 2 cut(s) | 1052, 1681 |
| CaiI | CAGNNNCTG | 1 cut(s) | 107 |
| Cfr13I | GGNCC | 4 cut(s) | 39, 688, 997, 1382 |
| Csp6I | GTAC | 3 cut(s) | 89, 104, 1789 |
| CviAII | CATG | 4 cut(s) | 446, 557, 734, 1786 |
| CviQI | GTAC | 3 cut(s) | 89, 104, 1789 |
| DpnI | GATC | 3 cut(s) | 428, 729, 1469 |
| DpnII | GATC | 3 cut(s) | 426, 727, 1467 |
| DraI | TTTAAA | 1 cut(s) | 346 |
| Eam1104I | CTCTTC | 2 cut(s) | 288, 1246 |
| EarI | CTCTTC | 2 cut(s) | 288, 1246 |
| Eco130I | CCWWGG | 2 cut(s) | 577, 1378 |
| Eco31I | GGTCTC | 1 cut(s) | 290 |
| Eco32I | GATATC | 1 cut(s) | 751 |
| Eco57I | CTGAAG | 2 cut(s) | 312, 861 |
| EcoO109I | RGGNCCY | 2 cut(s) | 688, 997 |
| EcoRII | CCWGG | 3 cut(s) | 255, 1402, 1722 |
| EcoRV | GATATC | 1 cut(s) | 751 |
| EcoT14I | CCWWGG | 2 cut(s) | 577, 1378 |
| ErhI | CCWWGG | 2 cut(s) | 577, 1378 |
| FaeI | CATG | 4 cut(s) | 449, 560, 737, 1789 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1499, 1531 |
| FatI | CATG | 4 cut(s) | 445, 556, 733, 1785 |
| FauNDI | CATATG | 1 cut(s) | 979 |
| FblI | GTMKAC | 1 cut(s) | 846 |
| Fnu4HI | GCNGC | 9 cut(s) | 1006, 1178, 1476, 1479, 1497, 1500, 1562, 1659, 1677 |
| FokI | GGATG | 3 cut(s) | 221, 802, 1058 |
| Fsp4HI | GCNGC | 9 cut(s) | 1006, 1178, 1476, 1479, 1497, 1500, 1562, 1659, 1677 |
| FspBI | CTAG | 4 cut(s) | 588, 773, 1050, 1512 |
| GluI | GCNGC | 9 cut(s) | 1006, 1178, 1476, 1479, 1497, 1500, 1562, 1659, 1677 |
| GsuI | CTGGAG | 5 cut(s) | 389, 1118, 1386, 1440, 1550 |
| HaeIII | GGCC | 4 cut(s) | 40, 689, 998, 1383 |
| HapII | CCGG | 3 cut(s) | 146, 856, 1623 |
| Hin1II | CATG | 4 cut(s) | 449, 560, 737, 1789 |
| HinfI | GANTC | 5 cut(s) | 925, 1422, 1664, 1708, 1778 |
| HpaII | CCGG | 3 cut(s) | 146, 856, 1623 |
| HphI | GGTGA | 1 cut(s) | 824 |
| Hpy166II | GTNNAC | 3 cut(s) | 554, 782, 847 |
| Hpy188I | TCNGA | 8 cut(s) | 61, 193, 292, 841, 930, 955, 1472, 1808 |
| Hpy8I | GTNNAC | 3 cut(s) | 554, 782, 847 |
| Hpy99I | CGWCG | 2 cut(s) | 343, 640 |
| HpyAV | CCTTC | 5 cut(s) | 35, 367, 862, 1010, 1133 |
| HpyCH4III | ACNGT | 5 cut(s) | 123, 274, 301, 1354, 1587 |
| HpyCH4V | TGCA | 8 cut(s) | 11, 404, 648, 733, 782, 863, 1634, 1676 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 209, 511, 1211, 1619 |
| Hsp92II | CATG | 4 cut(s) | 449, 560, 737, 1789 |
| Kpn2I | TCCGGA | 1 cut(s) | 855 |
| Kzo9I | GATC | 3 cut(s) | 426, 727, 1467 |
| LmnI | GCTCC | 5 cut(s) | 142, 1235, 1405, 1569, 1684 |
| Lsp1109I | GCAGC | 8 cut(s) | 1017, 1465, 1483, 1486, 1487, 1573, 1645, 1688 |
| LweI | GCATC | 4 cut(s) | 199, 232, 1036, 1736 |
| MaeI | CTAG | 4 cut(s) | 588, 773, 1050, 1512 |
| MaeIII | GTNAC | 3 cut(s) | 274, 1126, 1258 |
| MalI | GATC | 3 cut(s) | 428, 729, 1469 |
| MboI | GATC | 3 cut(s) | 426, 727, 1467 |
| MboII | GAAGA | 5 cut(s) | 305, 483, 1233, 1477, 1519 |
| MfeI | CAATTG | 2 cut(s) | 1686, 1773 |
| MflI | RGATCY | 3 cut(s) | 426, 727, 1467 |
| MhlI | GDGCHC | 1 cut(s) | 784 |
| MlyI | GAGTC | 1 cut(s) | 1431 |
| MmeI | TCCRAC | 1 cut(s) | 1096 |
| MroI | TCCGGA | 1 cut(s) | 855 |
| MseI | TTAA | 8 cut(s) | 305, 345, 378, 678, 912, 935, 1323, 1797 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1600 |
| MspA1I | CMGCKG | 1 cut(s) | 1478 |
| MspI | CCGG | 3 cut(s) | 146, 856, 1623 |
| MspR9I | CCNGG | 4 cut(s) | 257, 1404, 1624, 1724 |
| MunI | CAATTG | 2 cut(s) | 1686, 1773 |
| Mva1269I | GAATGC | 1 cut(s) | 1535 |
| MvaI | CCWGG | 3 cut(s) | 257, 1404, 1724 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 209, 511, 1211, 1619 |
| NciI | CCSGG | 1 cut(s) | 1624 |
| NdeI | CATATG | 1 cut(s) | 979 |
| NdeII | GATC | 3 cut(s) | 426, 727, 1467 |
| NlaIII | CATG | 4 cut(s) | 449, 560, 737, 1789 |
| NlaIV | GGNNCC | 5 cut(s) | 23, 144, 600, 690, 1237 |
| NmuCI | GTSAC | 2 cut(s) | 274, 1258 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 632 |
| PctI | GAATGC | 1 cut(s) | 1535 |
| PfeI | GAWTC | 4 cut(s) | 925, 1664, 1708, 1778 |
| PkrI | GCNGC | 9 cut(s) | 1007, 1179, 1477, 1480, 1498, 1501, 1563, 1660, 1678 |
| PleI | GAGTC | 1 cut(s) | 1430 |
| PpsI | GAGTC | 1 cut(s) | 1430 |
| PshBI | ATTAAT | 1 cut(s) | 912 |
| Psp6I | CCWGG | 3 cut(s) | 255, 1402, 1722 |
| PspGI | CCWGG | 3 cut(s) | 255, 1402, 1722 |
| PspN4I | GGNNCC | 5 cut(s) | 23, 144, 600, 690, 1237 |
| PspPI | GGNCC | 4 cut(s) | 39, 688, 997, 1382 |
| PstI | CTGCAG | 1 cut(s) | 1678 |
| PstNI | CAGNNNCTG | 1 cut(s) | 107 |
| PsuI | RGATCY | 3 cut(s) | 426, 727, 1467 |
| PvuII | CAGCTG | 1 cut(s) | 1478 |
| RsaI | GTAC | 3 cut(s) | 90, 105, 1790 |
| RsaNI | GTAC | 3 cut(s) | 89, 104, 1789 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1600 |
| SaqAI | TTAA | 8 cut(s) | 305, 345, 378, 678, 912, 935, 1323, 1797 |
| SatI | GCNGC | 9 cut(s) | 1006, 1178, 1476, 1479, 1497, 1500, 1562, 1659, 1677 |
| Sau3AI | GATC | 3 cut(s) | 426, 727, 1467 |
| Sau96I | GGNCC | 4 cut(s) | 39, 688, 997, 1382 |
| SchI | GAGTC | 1 cut(s) | 1431 |
| ScrFI | CCNGG | 4 cut(s) | 257, 1404, 1624, 1724 |
| SduI | GDGCHC | 1 cut(s) | 784 |
| SfaNI | GCATC | 4 cut(s) | 199, 232, 1036, 1736 |
| SfcI | CTRYAG | 3 cut(s) | 819, 1029, 1674 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1600 |
| SmlI | CTYRAG | 1 cut(s) | 547 |
| SmoI | CTYRAG | 1 cut(s) | 547 |
| SsiI | CCGC | 2 cut(s) | 1037, 1177 |
| SspMI | CTAG | 4 cut(s) | 588, 773, 1050, 1512 |
| StyD4I | CCNGG | 4 cut(s) | 255, 1402, 1622, 1722 |
| StyI | CCWWGG | 2 cut(s) | 577, 1378 |
| TaaI | ACNGT | 5 cut(s) | 123, 274, 301, 1354, 1587 |
| TaqI | TCGA | 2 cut(s) | 47, 638 |
| TatI | WGTACW | 1 cut(s) | 1788 |
| TauI | GCSGC | 1 cut(s) | 1180 |
| TfiI | GAWTC | 4 cut(s) | 925, 1664, 1708, 1778 |
| Tru1I | TTAA | 8 cut(s) | 305, 345, 378, 678, 912, 935, 1323, 1797 |
| Tru9I | TTAA | 8 cut(s) | 305, 345, 378, 678, 912, 935, 1323, 1797 |
| TscAI | CASTG | 2 cut(s) | 570, 1082 |
| TseFI | GTSAC | 2 cut(s) | 274, 1258 |
| TseI | GCWGC | 8 cut(s) | 1005, 1475, 1478, 1496, 1499, 1561, 1658, 1676 |
| Tsp45I | GTSAC | 2 cut(s) | 274, 1258 |
| TspDTI | ATGAA | 7 cut(s) | 96, 434, 483, 573, 653, 902, 1304 |
| TspGWI | ACGGA | 1 cut(s) | 1653 |
| TspRI | CASTG | 2 cut(s) | 570, 1082 |
| VneI | GTGCAC | 1 cut(s) | 780 |
| VspI | ATTAAT | 1 cut(s) | 912 |
| XapI | RAATTY | 3 cut(s) | 282, 879, 1714 |
| XmiI | GTMKAC | 1 cut(s) | 846 |
| XspI | CTAG | 4 cut(s) | 588, 773, 1050, 1512 |