isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61690 AT3G61690 AT3G61690 |
| fragaria_vesca | FvH4_7g16250 FvH4_7g16250 FvH4_7g16250 FvH4_7g16250 |
| malus_domestica | MD01G1079200.v1.1 MD07G1148100.v1.1 |
| prunus_persica | Prupe.2G186200_v2.0.a1 Prupe.2G186200_v2.0.a1 |
| pyrus_communis | pycom01g10750 pycom07g14710 |
| rosa_chinensis | RchiOBHm_Chr1g0359271 |
| rosa_laevigata | RLG00000027887 |
| rosa_multiflora | Rmu_ssc0000135.1_g000035 |
| rosa_roxburghii | Rroxscaffold_4G00297170 |
| rosa_rugosa | Rorug01G0269000 |
| rosa_samantha | Rh1AG283000 Rh1BG249200 Rh1CG267000 Rh1DG278100 |
| rosa_wichuraiana | Rw1G025120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2295 |
| Acc36I | ACCTGC | 1 cut(s) | 3355 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 35, 1595 |
| AccBSI | CCGCTC | 1 cut(s) | 3690 |
| AccI | GTMKAC | 4 cut(s) | 462, 2436, 3216, 3591 |
| AccII | CGCG | 1 cut(s) | 3535 |
| AclWI | GGATC | 6 cut(s) | 938, 1074, 1691, 2218, 2536, 2800 |
| AcoI | YGGCCR | 2 cut(s) | 1038, 2472 |
| AcsI | RAATTY | 6 cut(s) | 316, 386, 1915, 2011, 2143, 3133 |
| AcuI | CTGAAG | 5 cut(s) | 709, 1671, 2142, 2928, 3036 |
| AcyI | GRCGYC | 1 cut(s) | 3767 |
| AdeI | CACNNNGTG | 3 cut(s) | 1286, 2063, 3707 |
| AfaI | GTAC | 4 cut(s) | 255, 632, 1789, 2918 |
| AflII | CTTAAG | 1 cut(s) | 1216 |
| AflIII | ACRYGT | 1 cut(s) | 1447 |
| AhlI | ACTAGT | 2 cut(s) | 2216, 2483 |
| AjiI | CACGTC | 1 cut(s) | 2840 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1936, 1968, 3409, 3441 |
| AleI | CACNNNNGTG | 3 cut(s) | 1440, 3495, 3719 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2883, 2915, 3397, 3429 |
| Alw21I | GWGCWC | 4 cut(s) | 138, 497, 2823, 3638 |
| Alw26I | GTCTC | 4 cut(s) | 635, 822, 3034, 3247 |
| Alw44I | GTGCAC | 1 cut(s) | 493 |
| AlwI | GGATC | 6 cut(s) | 938, 1074, 1691, 2218, 2536, 2800 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2936 |
| ApaI | GGGCCC | 2 cut(s) | 337, 1588 |
| ApaLI | GTGCAC | 1 cut(s) | 493 |
| ApeKI | GCWGC | 9 cut(s) | 71, 202, 1221, 1877, 2324, 2579, 3317, 3561, 3602 |
| ApoI | RAATTY | 6 cut(s) | 316, 386, 1915, 2011, 2143, 3133 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 301, 333 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 221 |
| AspLEI | GCGC | 4 cut(s) | 608, 1161, 2324, 3549 |
| AsuC2I | CCSGG | 2 cut(s) | 1927, 2927 |
| AsuHPI | GGTGA | 9 cut(s) | 602, 1272, 1274, 1427, 1760, 2067, 3509, 3978, 3996 |
| AsuII | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| BaeGI | GKGCMC | 5 cut(s) | 25, 337, 497, 777, 1588 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3379, 3412 |
| BalI | TGGCCA | 1 cut(s) | 1040 |
| BanII | GRGCYC | 4 cut(s) | 138, 337, 1588, 3638 |
| BbsI | GAAGAC | 1 cut(s) | 661 |
| Bbv12I | GWGCWC | 4 cut(s) | 138, 497, 2823, 3638 |
| BbvCI | CCTCAGC | 1 cut(s) | 2284 |
| BbvI | GCAGC | 9 cut(s) | 58, 214, 1233, 1889, 2311, 2566, 3304, 3573, 3614 |
| BceAI | ACGGC | 2 cut(s) | 3164, 3600 |
| BciVI | GTATCC | 2 cut(s) | 996, 3747 |
| BclI | TGATCA | 5 cut(s) | 1408, 2179, 3025, 3817, 3991 |
| BcnI | CCSGG | 2 cut(s) | 1927, 2927 |
| BcoDI | GTCTC | 4 cut(s) | 635, 822, 3034, 3247 |
| BcuI | ACTAGT | 2 cut(s) | 2216, 2483 |
| BfaI | CTAG | 9 cut(s) | 716, 854, 1284, 1347, 2217, 2460, 2484, 3351, 3606 |
| BfmI | CTRYAG | 5 cut(s) | 129, 862, 1314, 1875, 2886 |
| BfoI | RGCGCY | 3 cut(s) | 609, 1162, 2325 |
| BfrI | CTTAAG | 1 cut(s) | 1216 |
| BfuAI | ACCTGC | 1 cut(s) | 3355 |
| BfuI | GTATCC | 2 cut(s) | 996, 3747 |
| BglII | AGATCT | 3 cut(s) | 1682, 1849, 2846 |
| BmcAI | AGTACT | 1 cut(s) | 1789 |
| BmgBI | CACGTC | 1 cut(s) | 2840 |
| BmiI | GGNNCC | 9 cut(s) | 335, 768, 1586, 1587, 1924, 3207, 3406, 3437, 3712 |
| BmrI | ACTGGG | 3 cut(s) | 611, 748, 2810 |
| BmsI | GCATC | 7 cut(s) | 72, 847, 1126, 1821, 1877, 2744, 2796 |
| BmuI | ACTGGG | 3 cut(s) | 611, 748, 2810 |
| BpiI | GAAGAC | 1 cut(s) | 661 |
| BpmI | CTGGAG | 5 cut(s) | 377, 1510, 2880, 3311, 3878 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1533, 2284 |
| Bpu14I | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| BpuEI | CTTGAG | 8 cut(s) | 245, 530, 716, 1242, 1551, 2152, 2276, 3676 |
| BpuMI | CCSGG | 2 cut(s) | 1927, 2927 |
| BsaAI | YACGTR | 1 cut(s) | 630 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2673 |
| BsaHI | GRCGYC | 1 cut(s) | 3767 |
| BsaI | GGTCTC | 1 cut(s) | 3247 |
| BsaWI | WCCGGW | 1 cut(s) | 3197 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 92, 122, 1055, 1085, 2707, 2737, 2878, 2908 |
| Bse1I | ACTGG | 8 cut(s) | 606, 743, 1527, 2407, 2816, 2897, 3328, 3518 |
| Bse3DI | GCAATG | 1 cut(s) | 138 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2673 |
| BseJI | GATNNNNATC | 1 cut(s) | 2673 |
| BseMI | GCAATG | 1 cut(s) | 138 |
| BseNI | ACTGG | 8 cut(s) | 606, 743, 1527, 2407, 2816, 2897, 3328, 3518 |
| BseRI | GAGGAG | 6 cut(s) | 134, 380, 527, 801, 1856, 2497 |
| BseSI | GKGCMC | 5 cut(s) | 25, 337, 497, 777, 1588 |
| BseXI | GCAGC | 9 cut(s) | 58, 214, 1233, 1889, 2311, 2566, 3304, 3573, 3614 |
| BsgI | GTGCAG | 2 cut(s) | 221, 3303 |
| Bsh1236I | CGCG | 1 cut(s) | 3535 |
| BsiHKAI | GWGCWC | 4 cut(s) | 138, 497, 2823, 3638 |
| BsiSI | CCGG | 3 cut(s) | 1926, 2927, 3198 |
| BsiWI | CGTACG | 1 cut(s) | 630 |
| BslFI | GGGAC | 4 cut(s) | 1834, 2341, 3412, 3449 |
| BsmAI | GTCTC | 4 cut(s) | 635, 822, 3034, 3247 |
| BsmFI | GGGAC | 4 cut(s) | 1834, 2341, 3412, 3449 |
| BsmI | GAATGC | 4 cut(s) | 147, 385, 3169, 3523 |
| Bso31I | GGTCTC | 1 cut(s) | 3247 |
| Bsp119I | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| Bsp120I | GGGCCC | 2 cut(s) | 333, 1584 |
| Bsp1286I | GDGCHC | 8 cut(s) | 25, 138, 337, 497, 777, 1588, 2823, 3638 |
| Bsp19I | CCATGG | 3 cut(s) | 613, 3054, 3629 |
| Bsp68I | TCGCGA | 1 cut(s) | 3535 |
| BspFNI | CGCG | 1 cut(s) | 3535 |
| BspHI | TCATGA | 3 cut(s) | 213, 2182, 3801 |
| BspLI | GGNNCC | 9 cut(s) | 335, 768, 1586, 1587, 1924, 3207, 3406, 3437, 3712 |
| BspMAI | CTGCAG | 2 cut(s) | 133, 1879 |
| BspMI | ACCTGC | 1 cut(s) | 3355 |
| BspPI | GGATC | 6 cut(s) | 938, 1074, 1691, 2218, 2536, 2800 |
| BspQI | GCTCTTC | 1 cut(s) | 1595 |
| BspT104I | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| BspTI | CTTAAG | 1 cut(s) | 1216 |
| BspTNI | GGTCTC | 1 cut(s) | 3247 |
| BsrBI | CCGCTC | 1 cut(s) | 3690 |
| BsrDI | GCAATG | 1 cut(s) | 138 |
| BsrI | ACTGG | 8 cut(s) | 606, 743, 1527, 2407, 2816, 2897, 3328, 3518 |
| BssNAI | GTATAC | 1 cut(s) | 2437 |
| BssNI | GRCGYC | 1 cut(s) | 3767 |
| BssT1I | CCWWGG | 7 cut(s) | 111, 613, 967, 2033, 3054, 3236, 3629 |
| Bst1107I | GTATAC | 1 cut(s) | 2437 |
| Bst4CI | ACNGT | 8 cut(s) | 1792, 2277, 3110, 3497, 3557, 3596, 3680, 3912 |
| Bst6I | CTCTTC | 2 cut(s) | 792, 1595 |
| BstACI | GRCGYC | 1 cut(s) | 3767 |
| BstAFI | CTTAAG | 1 cut(s) | 1216 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1874 |
| BstBAI | YACGTR | 1 cut(s) | 630 |
| BstBI | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| BstC8I | GCNNGC | 9 cut(s) | 30, 145, 1038, 1163, 1187, 1669, 2717, 3537, 3829 |
| BstDSI | CCRYGG | 4 cut(s) | 613, 3054, 3493, 3629 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 512 |
| BstFNI | CGCG | 1 cut(s) | 3535 |
| BstH2I | RGCGCY | 3 cut(s) | 609, 1162, 2325 |
| BstHHI | GCGC | 4 cut(s) | 608, 1161, 2324, 3549 |
| BstMAI | GTCTC | 4 cut(s) | 635, 822, 3034, 3247 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 228, 1025, 1874, 2827, 2882 |
| BstNSI | RCATGY | 4 cut(s) | 1451, 2747, 3223, 3736 |
| BstSFI | CTRYAG | 5 cut(s) | 129, 862, 1314, 1875, 2886 |
| BstSLI | GKGCMC | 5 cut(s) | 25, 337, 497, 777, 1588 |
| BstSNI | TACGTA | 1 cut(s) | 630 |
| BstUI | CGCG | 1 cut(s) | 3535 |
| BstV1I | GCAGC | 9 cut(s) | 58, 214, 1233, 1889, 2311, 2566, 3304, 3573, 3614 |
| BstV2I | GAAGAC | 1 cut(s) | 661 |
| BstX2I | RGATCY | 5 cut(s) | 1066, 1682, 1849, 2210, 2846 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1624, 3721 |
| BstYI | RGATCY | 5 cut(s) | 1066, 1682, 1849, 2210, 2846 |
| BstZ17I | GTATAC | 1 cut(s) | 2437 |
| BsuI | GTATCC | 2 cut(s) | 996, 3747 |
| BtgI | CCRYGG | 4 cut(s) | 613, 3054, 3493, 3629 |
| BtrI | CACGTC | 1 cut(s) | 2840 |
| BtsI | GCAGTG | 3 cut(s) | 1015, 3158, 3400 |
| BtsIMutI | CAGTG | 5 cut(s) | 1015, 2823, 3115, 3158, 3400 |
| BtuMI | TCGCGA | 1 cut(s) | 3535 |
| BveI | ACCTGC | 1 cut(s) | 3355 |
| Cac8I | GCNNGC | 9 cut(s) | 30, 145, 1038, 1163, 1187, 1669, 2717, 3537, 3829 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2936 |
| CciI | TCATGA | 3 cut(s) | 213, 2182, 3801 |
| CfoI | GCGC | 4 cut(s) | 608, 1161, 2324, 3549 |
| CseI | GACGC | 1 cut(s) | 3756 |
| Csp6I | GTAC | 4 cut(s) | 254, 631, 1788, 2917 |
| CviQI | GTAC | 4 cut(s) | 254, 631, 1788, 2917 |
| DraIII | CACNNNGTG | 3 cut(s) | 1286, 2063, 3707 |
| EaeI | YGGCCR | 2 cut(s) | 1038, 2472 |
| Eam1104I | CTCTTC | 2 cut(s) | 792, 1595 |
| EarI | CTCTTC | 2 cut(s) | 792, 1595 |
| EciI | GGCGGA | 2 cut(s) | 131, 1591 |
| Ecl136II | GAGCTC | 2 cut(s) | 136, 3636 |
| Eco105I | TACGTA | 1 cut(s) | 630 |
| Eco130I | CCWWGG | 7 cut(s) | 111, 613, 967, 2033, 3054, 3236, 3629 |
| Eco147I | AGGCCT | 1 cut(s) | 575 |
| Eco24I | GRGCYC | 4 cut(s) | 138, 337, 1588, 3638 |
| Eco31I | GGTCTC | 1 cut(s) | 3247 |
| Eco53kI | GAGCTC | 2 cut(s) | 136, 3636 |
| Eco57I | CTGAAG | 5 cut(s) | 709, 1671, 2142, 2928, 3036 |
| EcoICRI | GAGCTC | 2 cut(s) | 136, 3636 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 512 |
| EcoO109I | RGGNCCY | 6 cut(s) | 767, 1401, 1584, 1585, 2828, 2891 |
| EcoT14I | CCWWGG | 7 cut(s) | 111, 613, 967, 2033, 3054, 3236, 3629 |
| EcoT22I | ATGCAT | 1 cut(s) | 2052 |
| EcoT38I | GRGCYC | 4 cut(s) | 138, 337, 1588, 3638 |
| ErhI | CCWWGG | 7 cut(s) | 111, 613, 967, 2033, 3054, 3236, 3629 |
| FaqI | GGGAC | 4 cut(s) | 1834, 2341, 3412, 3449 |
| FauNDI | CATATG | 1 cut(s) | 3727 |
| FbaI | TGATCA | 5 cut(s) | 1408, 2179, 3025, 3817, 3991 |
| FblI | GTMKAC | 4 cut(s) | 462, 2436, 3216, 3591 |
| FriOI | GRGCYC | 4 cut(s) | 138, 337, 1588, 3638 |
| FspBI | CTAG | 9 cut(s) | 716, 854, 1284, 1347, 2217, 2460, 2484, 3351, 3606 |
| GlaI | GCGC | 4 cut(s) | 607, 1160, 2323, 3548 |
| GsuI | CTGGAG | 5 cut(s) | 377, 1510, 2880, 3311, 3878 |
| HaeII | RGCGCY | 3 cut(s) | 609, 1162, 2325 |
| HapII | CCGG | 3 cut(s) | 1926, 2927, 3198 |
| HgaI | GACGC | 1 cut(s) | 3756 |
| HhaI | GCGC | 4 cut(s) | 608, 1161, 2324, 3549 |
| Hin1I | GRCGYC | 1 cut(s) | 3767 |
| Hin6I | GCGC | 4 cut(s) | 606, 1159, 2322, 3547 |
| HinP1I | GCGC | 4 cut(s) | 606, 1159, 2322, 3547 |
| HincII | GTYRAC | 5 cut(s) | 958, 1858, 2280, 2553, 2589 |
| HindII | GTYRAC | 5 cut(s) | 958, 1858, 2280, 2553, 2589 |
| HindIII | AAGCTT | 2 cut(s) | 757, 912 |
| HpaI | GTTAAC | 1 cut(s) | 1858 |
| HpaII | CCGG | 3 cut(s) | 1926, 2927, 3198 |
| HphI | GGTGA | 9 cut(s) | 602, 1272, 1274, 1427, 1760, 2067, 3509, 3978, 3996 |
| HpyCH4III | ACNGT | 8 cut(s) | 1792, 2277, 3110, 3497, 3557, 3596, 3680, 3912 |
| HpyCH4IV | ACGT | 4 cut(s) | 629, 973, 2839, 3720 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 228, 1025, 1874, 2827, 2882 |
| HpySE526I | ACGT | 4 cut(s) | 629, 973, 2839, 3720 |
| Hsp92I | GRCGYC | 1 cut(s) | 3767 |
| HspAI | GCGC | 4 cut(s) | 606, 1159, 2322, 3547 |
| Ksp22I | TGATCA | 5 cut(s) | 1408, 2179, 3025, 3817, 3991 |
| KspAI | GTTAAC | 1 cut(s) | 1858 |
| LguI | GCTCTTC | 1 cut(s) | 1595 |
| LmnI | GCTCC | 5 cut(s) | 1529, 1843, 2599, 3073, 3633 |
| Lsp1109I | GCAGC | 9 cut(s) | 58, 214, 1233, 1889, 2311, 2566, 3304, 3573, 3614 |
| LweI | GCATC | 7 cut(s) | 72, 847, 1126, 1821, 1877, 2744, 2796 |
| MaeI | CTAG | 9 cut(s) | 716, 854, 1284, 1347, 2217, 2460, 2484, 3351, 3606 |
| MaeII | ACGT | 4 cut(s) | 629, 973, 2839, 3720 |
| MaeIII | GTNAC | 6 cut(s) | 796, 1351, 1932, 2908, 3110, 3467 |
| MbiI | CCGCTC | 1 cut(s) | 3690 |
| MflI | RGATCY | 5 cut(s) | 1066, 1682, 1849, 2210, 2846 |
| MhlI | GDGCHC | 8 cut(s) | 25, 138, 337, 497, 777, 1588, 2823, 3638 |
| MlsI | TGGCCA | 1 cut(s) | 1040 |
| MluNI | TGGCCA | 1 cut(s) | 1040 |
| MlyI | GAGTC | 9 cut(s) | 304, 320, 963, 1384, 1760, 2038, 2460, 3644, 3934 |
| MmeI | TCCRAC | 4 cut(s) | 72, 1605, 2705, 3908 |
| Mox20I | TGGCCA | 1 cut(s) | 1040 |
| Mph1103I | ATGCAT | 1 cut(s) | 2052 |
| MroXI | GAANNNNTTC | 1 cut(s) | 221 |
| MscI | TGGCCA | 1 cut(s) | 1040 |
| MseI | TTAA | 9 cut(s) | 474, 933, 1217, 1485, 1857, 1890, 2081, 2963, 3914 |
| MslI | CAYNNNNRTG | 8 cut(s) | 933, 1119, 1440, 2105, 2397, 3495, 3645, 3719 |
| Msp20I | TGGCCA | 1 cut(s) | 1040 |
| MspA1I | CMGCKG | 5 cut(s) | 205, 1691, 2288, 3014, 3856 |
| MspCI | CTTAAG | 1 cut(s) | 1216 |
| MspI | CCGG | 3 cut(s) | 1926, 2927, 3198 |
| Mva1269I | GAATGC | 4 cut(s) | 147, 385, 3169, 3523 |
| MvnI | CGCG | 1 cut(s) | 3535 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 228, 1025, 1874, 2827, 2882 |
| NciI | CCSGG | 2 cut(s) | 1927, 2927 |
| NcoI | CCATGG | 3 cut(s) | 613, 3054, 3629 |
| NdeI | CATATG | 1 cut(s) | 3727 |
| NlaIV | GGNNCC | 9 cut(s) | 335, 768, 1586, 1587, 1924, 3207, 3406, 3437, 3712 |
| NmuCI | GTSAC | 2 cut(s) | 796, 3110 |
| NruI | TCGCGA | 1 cut(s) | 3535 |
| NsiI | ATGCAT | 1 cut(s) | 2052 |
| NspI | RCATGY | 4 cut(s) | 1451, 2747, 3223, 3736 |
| NspV | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| OliI | CACNNNNGTG | 3 cut(s) | 1440, 3495, 3719 |
| PagI | TCATGA | 3 cut(s) | 213, 2182, 3801 |
| PceI | AGGCCT | 1 cut(s) | 575 |
| PciI | ACATGT | 1 cut(s) | 1447 |
| PciSI | GCTCTTC | 1 cut(s) | 1595 |
| PctI | GAATGC | 4 cut(s) | 147, 385, 3169, 3523 |
| PdmI | GAANNNNTTC | 1 cut(s) | 221 |
| Pfl23II | CGTACG | 1 cut(s) | 630 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 35, 1595 |
| PleI | GAGTC | 9 cut(s) | 304, 320, 962, 1383, 1759, 2037, 2459, 3644, 3933 |
| PpsI | GAGTC | 9 cut(s) | 304, 320, 962, 1383, 1759, 2037, 2459, 3644, 3933 |
| Ppu21I | YACGTR | 1 cut(s) | 630 |
| PpuMI | RGGWCCY | 2 cut(s) | 767, 2891 |
| PscI | ACATGT | 1 cut(s) | 1447 |
| PsiI | TTATAA | 1 cut(s) | 2295 |
| Psp124BI | GAGCTC | 2 cut(s) | 138, 3638 |
| Psp5II | RGGWCCY | 2 cut(s) | 767, 2891 |
| PspLI | CGTACG | 1 cut(s) | 630 |
| PspN4I | GGNNCC | 9 cut(s) | 335, 768, 1586, 1587, 1924, 3207, 3406, 3437, 3712 |
| PspOMI | GGGCCC | 2 cut(s) | 333, 1584 |
| PspPPI | RGGWCCY | 2 cut(s) | 767, 2891 |
| PstI | CTGCAG | 2 cut(s) | 133, 1879 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2936 |
| PsuI | RGATCY | 5 cut(s) | 1066, 1682, 1849, 2210, 2846 |
| PvuII | CAGCTG | 4 cut(s) | 1691, 2288, 3014, 3856 |
| RruI | TCGCGA | 1 cut(s) | 3535 |
| RsaI | GTAC | 4 cut(s) | 255, 632, 1789, 2918 |
| RsaNI | GTAC | 4 cut(s) | 254, 631, 1788, 2917 |
| RseI | CAYNNNNRTG | 8 cut(s) | 933, 1119, 1440, 2105, 2397, 3495, 3645, 3719 |
| SacI | GAGCTC | 2 cut(s) | 138, 3638 |
| SapI | GCTCTTC | 1 cut(s) | 1595 |
| SaqAI | TTAA | 9 cut(s) | 474, 933, 1217, 1485, 1857, 1890, 2081, 2963, 3914 |
| ScaI | AGTACT | 1 cut(s) | 1789 |
| SchI | GAGTC | 9 cut(s) | 304, 320, 963, 1384, 1760, 2038, 2460, 3644, 3934 |
| SduI | GDGCHC | 8 cut(s) | 25, 138, 337, 497, 777, 1588, 2823, 3638 |
| SfaNI | GCATC | 7 cut(s) | 72, 847, 1126, 1821, 1877, 2744, 2796 |
| SfcI | CTRYAG | 5 cut(s) | 129, 862, 1314, 1875, 2886 |
| SfuI | TTCGAA | 3 cut(s) | 1077, 1417, 3338 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 933, 1119, 1440, 2105, 2397, 3495, 3645, 3719 |
| SmlI | CTYRAG | 9 cut(s) | 260, 509, 695, 1216, 1257, 1566, 2167, 2255, 3691 |
| SmoI | CTYRAG | 9 cut(s) | 260, 509, 695, 1216, 1257, 1566, 2167, 2255, 3691 |
| SnaBI | TACGTA | 1 cut(s) | 630 |
| SpeI | ACTAGT | 2 cut(s) | 2216, 2483 |
| SseBI | AGGCCT | 1 cut(s) | 575 |
| SspMI | CTAG | 9 cut(s) | 716, 854, 1284, 1347, 2217, 2460, 2484, 3351, 3606 |
| SstI | GAGCTC | 2 cut(s) | 138, 3638 |
| StuI | AGGCCT | 1 cut(s) | 575 |
| StyI | CCWWGG | 7 cut(s) | 111, 613, 967, 2033, 3054, 3236, 3629 |
| TaaI | ACNGT | 8 cut(s) | 1792, 2277, 3110, 3497, 3557, 3596, 3680, 3912 |
| TaiI | ACGT | 4 cut(s) | 632, 976, 2842, 3723 |
| TaqII | GACCGA | 1 cut(s) | 3453 |
| TatI | WGTACW | 1 cut(s) | 1787 |
| TauI | GCSGC | 1 cut(s) | 208 |
| Tru1I | TTAA | 9 cut(s) | 474, 933, 1217, 1485, 1857, 1890, 2081, 2963, 3914 |
| Tru9I | TTAA | 9 cut(s) | 474, 933, 1217, 1485, 1857, 1890, 2081, 2963, 3914 |
| TscAI | CASTG | 5 cut(s) | 1015, 2823, 3115, 3158, 3400 |
| TseFI | GTSAC | 2 cut(s) | 796, 3110 |
| TseI | GCWGC | 9 cut(s) | 71, 202, 1221, 1877, 2324, 2579, 3317, 3561, 3602 |
| Tsp45I | GTSAC | 2 cut(s) | 796, 3110 |
| TspGWI | ACGGA | 3 cut(s) | 67, 1899, 2791 |
| TspRI | CASTG | 5 cut(s) | 1015, 2823, 3115, 3158, 3400 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 35, 1595 |
| Vha464I | CTTAAG | 1 cut(s) | 1216 |
| VneI | GTGCAC | 1 cut(s) | 493 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 512 |
| XapI | RAATTY | 6 cut(s) | 316, 386, 1915, 2011, 2143, 3133 |
| XbaI | TCTAGA | 2 cut(s) | 715, 853 |
| XceI | RCATGY | 4 cut(s) | 1451, 2747, 3223, 3736 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2910, 3860 |
| XmiI | GTMKAC | 4 cut(s) | 462, 2436, 3216, 3591 |
| XmnI | GAANNNNTTC | 1 cut(s) | 221 |
| XspI | CTAG | 9 cut(s) | 716, 854, 1284, 1347, 2217, 2460, 2484, 3351, 3606 |
| ZrmI | AGTACT | 1 cut(s) | 1789 |
| Zsp2I | ATGCAT | 1 cut(s) | 2052 |