FvH4_7g24890

Sorting and assembly machinery

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009225
Physical Location & Seq
Reverse (-)
19117227 .. 19121507
4281 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24890.t1

Sequence Viewer

Length: 1605 bp
ATGGCGGACTCTGAAACCCTAAACCCTAAAATCGACCCCGAAGACCAACCCTCCTCCAATGTCAACGACAACGGCCTCCACGAACCCGACCCGGAGGAGCCCGATGACGACGAATTCGAAGAAGACGAAGAAGACGACGACGAGGAGCCGCCGCCGTCGAAGGAGCAGCAGCTGCGTTCGGCGAGGGCGAAGACGGAGGGCCTGGTCCAGCGGATGATGAAAGAGCCCGTGGAGATAAGAGTGCACGACGTTTTGATCAAAGGGAACACGAAGACGAAGGAGTATCTGATCGAGGCGGAGCTGGAGGGGATTAAGAAGGCCACGACTATGCAGGAGCTTCTCGAAGCTTCGACCTTGGCCAATGCCAAGCTTAAAGAGCTTGAAATCTTCGATTCGGTTCGGATCACGCTCGATGCCGGCCCGCCGGAGCTGCCGGGGACCGCCAACGTCATCGTCGAGGTCGCCGAGACTGAGAGTGTGATTACTGGTGAAATGGGCTGTTATACTAAGCCAGCGGCTAGATCATGGACACTTGAAAGTTCCCTCAAGCTTAAAAATATTTTTGGATATGGGGATTTGTGGGATTGTTCTGTGGCATATGGTCCCAACCAAACATCGGAACTAAGTACTGGAGTGGTTTTACCCCGATTCAAAGGTTTTGTAAATCCCTTGAAAGCGCGTGCATTCCTGCTTTCCCAAGATTGGCTGGAGTTCTCCTCTTATAAAGAGCGAATGGCTGGGCTCTCTCTTACCCTATTTTCAACAAGGCATCATGATATGGTATACAACCTTGGATGGCGTACACTTACAGATCAATCACAGATGGCCTCCAAGTCAATTAGAAGGCAGCTTGGCCATGGCTTACTTTCATCCTTGAAGTATACATTTACACTTGATAGGAGAAATTCACAATTGAGGCCAACTCGAGGCTATTCTTTTGTTTCTTCTACTCATGTTGGTGGCCTGGCCCCTGATAGTCGCAGTGTTCGTTTTTTGCGCCAGGAGCTTGATTTTCGCTATGCAGTCCCATTGGGATTTTATAATGCTGCACTCAACTTTGGGGTCTCTGGGGGTGTGATCTTTCCTTGGGGGAATGGATTTTTGAACAAGCCTACATCTCTTCCAGAGCGATTCTTCTTAGGTGGTGATTTCTCTCCTCTTTGTACTCTTGGGGGCCCTTCAACAGTGTGGGGATTTAAAACAAGAGGAATAGGCCCTACTGAACCAAGAAGACATGTCAGAGATAATTCTAATGATGAGAATTCAGAATCCTCTGGATATGATTTTGTTGGAGGAGATCTTGCTGTTTCTGCATTTGCAGACATTTCATTTGACCTTCCATTGCGCTGGTTAAGAGAACGTGGAGTTCATGGACATGTTTTTGCGGGTACCGGGAATGTAGCAAAACTGTCGGAGAATGAGTTCAAAAAATTTTCCTTCCAGAGATTCATGGAGTCATTTCGAAGTTCAGTTGGAGCTGGGATTGTCATCCCCACAAAAATTTTTCGCCTCGAGTGCAACTACTACTATATCCTGAAGCAATTTGAGCATGATGGCGGAAAGGCTGGCTTTCGGTTTAGCATCTCAGCTCCATCATCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0008150 GO:0009987 GO:0016043 GO:0042407 GO:0061024 GO:0071840
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bac_surface_Ag POTRA

Protein Analysis

535

Amino Acids

59.6

Weight (kDa)

5.32

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Omp85 PF01103 186 - 529 1e-29 Omp85 superfamily domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 723, 1041
Acc65I GGTACC 1 cut(s) 1388
AccB1I GGYRCC 1 cut(s) 1388
AccI GTMKAC 2 cut(s) 783, 881
AccII CGCG 1 cut(s) 679
AclWI GGATC 1 cut(s) 410
AcoI YGGCCR 2 cut(s) 357, 853
AcsI RAATTY 5 cut(s) 113, 904, 1261, 1430, 1500
AcuI CTGAAG 1 cut(s) 1556
AfaI GTAC 4 cut(s) 628, 802, 1165, 1390
AfiI CCNNNNNNNGG 3 cut(s) 616, 702, 926
AflIII ACRYGT 2 cut(s) 1234, 1375
AgsI TTSAA 9 cut(s) 383, 536, 652, 673, 762, 877, 1105, 1182, 1426
AjnI CCWGG 3 cut(s) 201, 963, 999
AloI GAACNNNNNNTCC 2 cut(s) 1406, 1438
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 2 cut(s) 461, 1069
Alw44I GTGCAC 1 cut(s) 242
AlwI GGATC 1 cut(s) 410
AlwNI CAGNNNCTG 1 cut(s) 172
Ama87I CYCGRG 2 cut(s) 924, 1511
ApaI GGGCCC 1 cut(s) 1178
ApaLI GTGCAC 1 cut(s) 242
ApeKI GCWGC 6 cut(s) 166, 169, 172, 430, 847, 1046
ApoI RAATTY 5 cut(s) 113, 904, 1261, 1430, 1500
ArsI GACNNNNNNTTYG 4 cut(s) 98, 130, 1313, 1345
Asp700I GAANNNNTTC 1 cut(s) 1421
Asp718I GGTACC 1 cut(s) 1388
AspLEI GCGC 3 cut(s) 679, 999, 1347
AspS9I GGNCC 9 cut(s) 199, 205, 419, 438, 602, 967, 1174, 1175, 1214
AsuC2I CCSGG 3 cut(s) 92, 435, 1393
AsuHPI GGTGA 2 cut(s) 500, 1157
AsuII TTCGAA 2 cut(s) 117, 1462
AvaI CYCGRG 2 cut(s) 924, 1511
AvaII GGWCC 3 cut(s) 205, 438, 602
BaeGI GKGCMC 2 cut(s) 246, 1178
BalI TGGCCA 2 cut(s) 359, 855
BanI GGYRCC 1 cut(s) 1388
BanII GRGCYC 4 cut(s) 102, 228, 744, 1178
BbsI GAAGAC 6 cut(s) 48, 129, 138, 197, 278, 1237
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 6 cut(s) 159, 178, 181, 417, 859, 1033
BccI CCATC 4 cut(s) 789, 817, 1547, 1600
BceAI ACGGC 2 cut(s) 88, 139
BcgI CGANNNNNNTGC 2 cut(s) 1392, 1426
BciT130I CCWGG 3 cut(s) 203, 965, 1001
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 3 cut(s) 92, 435, 1393
BcoDI GTCTC 2 cut(s) 461, 1069
BfaI CTAG 1 cut(s) 519
BglII AGATCT 1 cut(s) 1297
BisI GCNGC 9 cut(s) 149, 152, 167, 170, 173, 431, 516, 848, 1047
BlsI GCNGC 9 cut(s) 150, 153, 168, 171, 174, 432, 517, 849, 1048
BmcAI AGTACT 1 cut(s) 628
Bme1390I CCNGG 6 cut(s) 92, 203, 435, 965, 1001, 1393
Bme18I GGWCC 3 cut(s) 205, 438, 602
BmeT110I CYCGRG 2 cut(s) 924, 1511
BmgT120I GGNCC 9 cut(s) 199, 205, 419, 438, 602, 967, 1174, 1175, 1214
BmiI GGNNCC 8 cut(s) 99, 147, 439, 604, 969, 1175, 1176, 1390
BmrFI CCNGG 6 cut(s) 92, 203, 435, 965, 1001, 1393
BmsI GCATC 3 cut(s) 403, 778, 1590
BpiI GAAGAC 6 cut(s) 48, 129, 138, 197, 278, 1237
BplI GAGNNNNNCTC 4 cut(s) 701, 733, 907, 939
BpmI CTGGAG 3 cut(s) 323, 651, 728
Bpu14I TTCGAA 2 cut(s) 117, 1462
BpuEI CTTGAG 1 cut(s) 530
BpuMI CCSGG 3 cut(s) 92, 435, 1393
BsaBI GATNNNNATC 1 cut(s) 1487
BsaI GGTCTC 1 cut(s) 1069
BsaJI CCNNGG 6 cut(s) 228, 354, 434, 790, 856, 1085
BsaXI ACNNNNNCTCC 4 cut(s) 35, 65, 1406, 1436
Bsc4I CCNNNNNNNGG 3 cut(s) 616, 702, 926
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 2 cut(s) 490, 634
Bse3DI GCAATG 1 cut(s) 1340
Bse8I GATNNNNATC 1 cut(s) 1487
BseBI CCWGG 3 cut(s) 203, 965, 1001
BseDI CCNNGG 6 cut(s) 228, 354, 434, 790, 856, 1085
BseGI GGATG 4 cut(s) 219, 800, 869, 1488
BseJI GATNNNNATC 1 cut(s) 1487
BseLI CCNNNNNNNGG 3 cut(s) 616, 702, 926
BseMI GCAATG 1 cut(s) 1340
BseMII CTCAG 2 cut(s) 462, 1599
BseNI ACTGG 2 cut(s) 490, 634
BseRI GAGGAG 6 cut(s) 43, 110, 158, 706, 1146, 1308
BseSI GKGCMC 2 cut(s) 246, 1178
BseXI GCAGC 6 cut(s) 159, 178, 181, 417, 859, 1033
BseYI CCCAGC 2 cut(s) 737, 1478
BsgI GTGCAG 1 cut(s) 1032
Bsh1236I CGCG 1 cut(s) 679
BshNI GGYRCC 1 cut(s) 1388
BsiHKAI GWGCWC 1 cut(s) 246
BsiHKCI CYCGRG 2 cut(s) 924, 1511
BsiSI CCGG 5 cut(s) 92, 417, 425, 434, 1392
BslFI GGGAC 3 cut(s) 451, 588, 1010
BslI CCNNNNNNNGG 3 cut(s) 616, 702, 926
BsmAI GTCTC 2 cut(s) 461, 1069
BsmFI GGGAC 3 cut(s) 451, 588, 1010
BsmI GAATGC 1 cut(s) 683
Bso31I GGTCTC 1 cut(s) 1069
BsoBI CYCGRG 2 cut(s) 924, 1511
Bsp119I TTCGAA 2 cut(s) 117, 1462
Bsp120I GGGCCC 1 cut(s) 1174
Bsp1286I GDGCHC 5 cut(s) 102, 228, 246, 744, 1178
Bsp143I GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
Bsp19I CCATGG 1 cut(s) 856
BspCNI CTCAG 2 cut(s) 463, 1598
BspFNI CGCG 1 cut(s) 679
BspHI TCATGA 1 cut(s) 772
BspLI GGNNCC 8 cut(s) 99, 147, 439, 604, 969, 1175, 1176, 1390
BspPI GGATC 1 cut(s) 410
BspT104I TTCGAA 2 cut(s) 117, 1462
BspT107I GGYRCC 1 cut(s) 1388
BspTNI GGTCTC 1 cut(s) 1069
BsrDI GCAATG 1 cut(s) 1340
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 2 cut(s) 490, 634
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 6 cut(s) 228, 354, 434, 790, 856, 1085
BssMI GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
BssNAI GTATAC 2 cut(s) 784, 882
BssT1I CCWWGG 4 cut(s) 354, 790, 856, 1085
Bst1107I GTATAC 2 cut(s) 784, 882
Bst2UI CCWGG 3 cut(s) 203, 965, 1001
Bst4CI ACNGT 2 cut(s) 1186, 1410
Bst6I CTCTTC 1 cut(s) 1125
BstAPI GCANNNNNTGC 1 cut(s) 172
BstBI TTCGAA 2 cut(s) 117, 1462
BstC8I GCNNGC 5 cut(s) 418, 422, 513, 681, 1567
BstDEI CTNAG 5 cut(s) 471, 507, 623, 1138, 1585
BstDSI CCRYGG 2 cut(s) 228, 856
BstF5I GGATG 4 cut(s) 219, 800, 869, 1488
BstFNI CGCG 1 cut(s) 679
BstHHI GCGC 3 cut(s) 679, 999, 1347
BstKTI GATC 7 cut(s) 258, 291, 405, 524, 814, 1080, 1300
BstMAI GTCTC 2 cut(s) 461, 1069
BstMBI GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
BstMWI GCNNNNNNNGC 7 cut(s) 172, 376, 430, 1003, 1310, 1515, 1546
BstNI CCWGG 3 cut(s) 203, 965, 1001
BstNSI RCATGY 2 cut(s) 1238, 1379
BstSCI CCNGG 6 cut(s) 90, 201, 433, 963, 999, 1391
BstSLI GKGCMC 2 cut(s) 246, 1178
BstUI CGCG 1 cut(s) 679
BstV1I GCAGC 6 cut(s) 159, 178, 181, 417, 859, 1033
BstV2I GAAGAC 6 cut(s) 48, 129, 138, 197, 278, 1237
BstX2I RGATCY 1 cut(s) 1297
BstXI CCANNNNNNTGG 1 cut(s) 1347
BstYI RGATCY 1 cut(s) 1297
BstZ17I GTATAC 2 cut(s) 784, 882
BtgI CCRYGG 2 cut(s) 228, 856
BtsCI GGATG 4 cut(s) 219, 800, 869, 1488
BtsI GCAGTG 1 cut(s) 988
BtsIMutI CAGTG 2 cut(s) 988, 1191
Cac8I GCNNGC 5 cut(s) 418, 422, 513, 681, 1567
CaiI CAGNNNCTG 1 cut(s) 172
CciI TCATGA 1 cut(s) 772
CfoI GCGC 3 cut(s) 679, 999, 1347
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 9 cut(s) 199, 205, 419, 438, 602, 967, 1174, 1175, 1214
Csp6I GTAC 4 cut(s) 627, 801, 1164, 1389
CviAII CATG 9 cut(s) 525, 773, 857, 953, 1235, 1370, 1376, 1450, 1550
CviQI GTAC 4 cut(s) 627, 801, 1164, 1389
DdeI CTNAG 5 cut(s) 471, 507, 623, 1138, 1585
DpnI GATC 7 cut(s) 257, 290, 404, 523, 813, 1079, 1299
DpnII GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
DraI TTTAAA 1 cut(s) 1198
EaeI YGGCCR 2 cut(s) 357, 853
Eam1104I CTCTTC 1 cut(s) 1125
EarI CTCTTC 1 cut(s) 1125
EciI GGCGGA 3 cut(s) 20, 311, 1572
Eco130I CCWWGG 4 cut(s) 354, 790, 856, 1085
Eco24I GRGCYC 4 cut(s) 102, 228, 744, 1178
Eco31I GGTCTC 1 cut(s) 1069
Eco47I GGWCC 3 cut(s) 205, 438, 602
Eco57I CTGAAG 1 cut(s) 1556
Eco88I CYCGRG 2 cut(s) 924, 1511
EcoO109I RGGNCCY 4 cut(s) 199, 1174, 1175, 1214
EcoRI GAATTC 2 cut(s) 113, 1261
EcoRII CCWGG 3 cut(s) 201, 963, 999
EcoT14I CCWWGG 4 cut(s) 354, 790, 856, 1085
EcoT38I GRGCYC 4 cut(s) 102, 228, 744, 1178
ErhI CCWWGG 4 cut(s) 354, 790, 856, 1085
FaeI CATG 9 cut(s) 528, 776, 860, 956, 1238, 1373, 1379, 1453, 1553
FalI AAGNNNNNCTT 2 cut(s) 1553, 1585
FaqI GGGAC 3 cut(s) 451, 588, 1010
FatI CATG 9 cut(s) 524, 772, 856, 952, 1234, 1369, 1375, 1449, 1549
FauI CCCGC 2 cut(s) 429, 1378
FauNDI CATATG 1 cut(s) 598
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 2 cut(s) 783, 881
Fnu4HI GCNGC 9 cut(s) 149, 152, 167, 170, 173, 431, 516, 848, 1047
FokI GGATG 4 cut(s) 226, 807, 856, 1475
FriOI GRGCYC 4 cut(s) 102, 228, 744, 1178
Fsp4HI GCNGC 9 cut(s) 149, 152, 167, 170, 173, 431, 516, 848, 1047
FspBI CTAG 1 cut(s) 519
GlaI GCGC 3 cut(s) 678, 998, 1346
GluI GCNGC 9 cut(s) 149, 152, 167, 170, 173, 431, 516, 848, 1047
GsaI CCCAGC 2 cut(s) 741, 1482
GsuI CTGGAG 3 cut(s) 323, 651, 728
HapII CCGG 5 cut(s) 92, 417, 425, 434, 1392
HhaI GCGC 3 cut(s) 679, 999, 1347
Hin1II CATG 9 cut(s) 528, 776, 860, 956, 1238, 1373, 1379, 1453, 1553
Hin6I GCGC 3 cut(s) 677, 997, 1345
HinP1I GCGC 3 cut(s) 677, 997, 1345
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HindIII AAGCTT 3 cut(s) 345, 368, 548
HinfI GANTC 7 cut(s) 8, 392, 648, 1131, 1268, 1446, 1454
HpaII CCGG 5 cut(s) 92, 417, 425, 434, 1392
HphI GGTGA 2 cut(s) 500, 1157
Hpy166II GTNNAC 5 cut(s) 64, 244, 784, 803, 882
Hpy188I TCNGA 7 cut(s) 13, 288, 402, 619, 1241, 1267, 1414
Hpy188III TCNNGA 6 cut(s) 341, 773, 1124, 1275, 1441, 1534
Hpy8I GTNNAC 5 cut(s) 64, 244, 784, 803, 882
Hpy99I CGWCG 6 cut(s) 113, 140, 143, 160, 251, 458
HpyAV CCTTC 7 cut(s) 154, 271, 310, 837, 1188, 1346, 1447
HpyCH4III ACNGT 2 cut(s) 1186, 1410
HpyCH4IV ACGT 3 cut(s) 249, 447, 1360
HpyCH4V TGCA 8 cut(s) 244, 331, 683, 1022, 1049, 1313, 1319, 1518
HpyF10VI GCNNNNNNNGC 7 cut(s) 172, 376, 430, 1003, 1310, 1515, 1546
HpyF3I CTNAG 5 cut(s) 471, 507, 623, 1138, 1585
HpySE526I ACGT 3 cut(s) 249, 447, 1360
Hsp92II CATG 9 cut(s) 528, 776, 860, 956, 1238, 1373, 1379, 1453, 1553
HspAI GCGC 3 cut(s) 677, 997, 1345
KpnI GGTACC 1 cut(s) 1392
KroI GCCGGC 1 cut(s) 416
KroNI GCCGGC 1 cut(s) 418
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
LmnI GCTCC 9 cut(s) 97, 145, 163, 298, 334, 427, 1003, 1475, 1594
Lsp1109I GCAGC 6 cut(s) 159, 178, 181, 417, 859, 1033
LweI GCATC 3 cut(s) 403, 778, 1590
MaeI CTAG 1 cut(s) 519
MaeII ACGT 3 cut(s) 249, 447, 1360
MalI GATC 7 cut(s) 257, 290, 404, 523, 813, 1079, 1299
MboI GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
MfeI CAATTG 1 cut(s) 911
MflI RGATCY 1 cut(s) 1297
MhlI GDGCHC 5 cut(s) 102, 228, 246, 744, 1178
MlsI TGGCCA 2 cut(s) 359, 855
MluCI AATT 9 cut(s) 113, 837, 904, 911, 1246, 1261, 1430, 1500, 1541
MluNI TGGCCA 2 cut(s) 359, 855
MlyI GAGTC 2 cut(s) 2, 1463
MmeI TCCRAC 3 cut(s) 1270, 1392, 1453
Mox20I TGGCCA 2 cut(s) 359, 855
MroNI GCCGGC 1 cut(s) 416
MroXI GAANNNNTTC 1 cut(s) 1421
MscI TGGCCA 2 cut(s) 359, 855
MseI TTAA 5 cut(s) 312, 372, 552, 1197, 1352
MslI CAYNNNNRTG 3 cut(s) 326, 957, 1374
Msp20I TGGCCA 2 cut(s) 359, 855
MspA1I CMGCKG 3 cut(s) 172, 211, 515
MspI CCGG 5 cut(s) 92, 417, 425, 434, 1392
MspR9I CCNGG 6 cut(s) 92, 203, 435, 965, 1001, 1393
MunI CAATTG 1 cut(s) 911
Mva1269I GAATGC 1 cut(s) 683
MvaI CCWGG 3 cut(s) 203, 965, 1001
MvnI CGCG 1 cut(s) 679
MwoI GCNNNNNNNGC 7 cut(s) 172, 376, 430, 1003, 1310, 1515, 1546
NaeI GCCGGC 1 cut(s) 418
NciI CCSGG 3 cut(s) 92, 435, 1393
NcoI CCATGG 1 cut(s) 856
NdeI CATATG 1 cut(s) 598
NdeII GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
NgoMIV GCCGGC 1 cut(s) 416
NlaIII CATG 9 cut(s) 528, 776, 860, 956, 1238, 1373, 1379, 1453, 1553
NlaIV GGNNCC 8 cut(s) 99, 147, 439, 604, 969, 1175, 1176, 1390
NmeAIII GCCGAG 1 cut(s) 490
NspI RCATGY 2 cut(s) 1238, 1379
NspV TTCGAA 2 cut(s) 117, 1462
PaeR7I CTCGAG 2 cut(s) 924, 1511
PagI TCATGA 1 cut(s) 772
PciI ACATGT 2 cut(s) 1234, 1375
PcsI WCGNNNNNNNCGW 8 cut(s) 78, 114, 123, 132, 185, 453, 462, 985
PctI GAATGC 1 cut(s) 683
PdiI GCCGGC 1 cut(s) 418
PdmI GAANNNNTTC 1 cut(s) 1421
PfeI GAWTC 5 cut(s) 392, 648, 1131, 1268, 1446
PkrI GCNGC 9 cut(s) 150, 153, 168, 171, 174, 432, 517, 849, 1048
PleI GAGTC 2 cut(s) 2, 1462
PpsI GAGTC 2 cut(s) 2, 1462
PscI ACATGT 2 cut(s) 1234, 1375
PsiI TTATAA 2 cut(s) 723, 1041
Psp6I CCWGG 3 cut(s) 201, 963, 999
PspFI CCCAGC 2 cut(s) 737, 1478
PspGI CCWGG 3 cut(s) 201, 963, 999
PspN4I GGNNCC 8 cut(s) 99, 147, 439, 604, 969, 1175, 1176, 1390
PspOMI GGGCCC 1 cut(s) 1174
PspPI GGNCC 9 cut(s) 199, 205, 419, 438, 602, 967, 1174, 1175, 1214
PspXI VCTCGAGB 2 cut(s) 924, 1511
PstNI CAGNNNCTG 1 cut(s) 172
PsuI RGATCY 1 cut(s) 1297
PvuII CAGCTG 1 cut(s) 172
RsaI GTAC 4 cut(s) 628, 802, 1165, 1390
RsaNI GTAC 4 cut(s) 627, 801, 1164, 1389
RseI CAYNNNNRTG 3 cut(s) 326, 957, 1374
SaqAI TTAA 5 cut(s) 312, 372, 552, 1197, 1352
SatI GCNGC 9 cut(s) 149, 152, 167, 170, 173, 431, 516, 848, 1047
Sau3AI GATC 7 cut(s) 255, 288, 402, 521, 811, 1077, 1297
Sau96I GGNCC 9 cut(s) 199, 205, 419, 438, 602, 967, 1174, 1175, 1214
ScaI AGTACT 1 cut(s) 628
SchI GAGTC 2 cut(s) 2, 1463
ScrFI CCNGG 6 cut(s) 92, 203, 435, 965, 1001, 1393
SduI GDGCHC 5 cut(s) 102, 228, 246, 744, 1178
SfaNI GCATC 3 cut(s) 403, 778, 1590
Sfr274I CTCGAG 2 cut(s) 924, 1511
SfuI TTCGAA 2 cut(s) 117, 1462
SinI GGWCC 3 cut(s) 205, 438, 602
SlaI CTCGAG 2 cut(s) 924, 1511
SmiMI CAYNNNNRTG 3 cut(s) 326, 957, 1374
SmlI CTYRAG 3 cut(s) 545, 924, 1511
SmoI CTYRAG 3 cut(s) 545, 924, 1511
Sse9I AATT 9 cut(s) 113, 837, 904, 911, 1246, 1261, 1430, 1500, 1541
SspI AATATT 1 cut(s) 559
SspMI CTAG 1 cut(s) 519
StyD4I CCNGG 6 cut(s) 90, 201, 433, 963, 999, 1391
StyI CCWWGG 4 cut(s) 354, 790, 856, 1085
TaaI ACNGT 2 cut(s) 1186, 1410
TaiI ACGT 3 cut(s) 252, 450, 1363
TasI AATT 9 cut(s) 113, 837, 904, 911, 1246, 1261, 1430, 1500, 1541
TatI WGTACW 2 cut(s) 626, 1163
TauI GCSGC 3 cut(s) 151, 154, 518
TfiI GAWTC 5 cut(s) 392, 648, 1131, 1268, 1446
Tru1I TTAA 5 cut(s) 312, 372, 552, 1197, 1352
Tru9I TTAA 5 cut(s) 312, 372, 552, 1197, 1352
TscAI CASTG 2 cut(s) 988, 1191
TseI GCWGC 6 cut(s) 166, 169, 172, 430, 847, 1046
TspDTI ATGAA 5 cut(s) 233, 858, 1317, 1358, 1438
TspGWI ACGGA 1 cut(s) 209
TspRI CASTG 2 cut(s) 988, 1191
VneI GTGCAC 1 cut(s) 242
VpaK11BI GGWCC 3 cut(s) 205, 438, 602
XapI RAATTY 5 cut(s) 113, 904, 1261, 1430, 1500
XceI RCATGY 2 cut(s) 1238, 1379
XhoI CTCGAG 2 cut(s) 924, 1511
XmiI GTMKAC 2 cut(s) 783, 881
XmnI GAANNNNTTC 1 cut(s) 1421
XspI CTAG 1 cut(s) 519
ZrmI AGTACT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.