RLG00000027011

Sorting and assembly machinery

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0009225
Physical Location & Seq
Forward (+)
7659099 .. 7662982
3884 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027011

Sequence Viewer

Length: 1629 bp
ATGGCGGACTCTGAAAACCTAAACCCTAAAGTCGACCCCGAACAACAACCCCCCTCCAATCTCAACCAAAACGGACACCACGAACCCGACCCGGATGAACCCGATGACGACGAATTCGAAGAAGAAGAAGAAGAAGAAGATGACGACGACGACGAACCGCCGCCGCCGCTGCAGCGAAAGCCGTCCTCGGAGGAGTCACTGCGTTCGTCGAAGGCCAAGCTGGAGGGCCTGGTCCGTCGGATGGAGATGGAGAAAGTCGATCTGAGGGTGCACGATGTTGTGATCAGAGGGAACACCAAGACCAAGGAGTATCTGATCGAGGCCGAGCTGGAGGGGATTAGGAAGGCCACGACTATGCAGGAGCTTCTCGAGGCCTCTGCTAAGGCCAATGCCAAGCTTAAAGAGCTCGATATCTTCGATTCCGTTCGGATCACGCTCGATTCCGGCCCGCCGGAGCTGCCGCGAACCGCCAACGTCCTCGTCGACGTCGTCGAGACTGAGAGTGTGATTACCGGTGAACTCGGCTGTTACACTAAGCCGGCGGCTAGATCTTGGACAGCTGAGGGTTCACTCAAGTTTAAAAATTTGTTTGGATATGGGGATATGTGGGATGGTTCTTTGGCATATGGTCCCAGCCAAACATCGGAAATAAGTGCTGGTGTGCTTTTACCCCGGTTCAGAGGATTTGTAACTCCTGTGACAGCACGTGCATTCCTTCTTTCCCAAGATTGGCTGGAGTTATCCTCTTATAAAGAGCGAATGGCTGGGCTCTCTCTTAGCTTATTTTCAACCAGGCATCATGATGTTGTATACAACCTTGGTTGGCGTACACTTACAGATCCATCACAAATGGCCTCCAAGTCAATTAGAAGGCAGCTTGGCCATGGCTTACTTTCATCCATAAAGTACACATTTACACTTGATAGGAGAAATTCATATTTGAGGCCAACTCGAGGCTATTCTTTTGTTTCTTCTAGTCATGTTGGTGGCCTTTCCCCTGACAGTCGGAGTGTCCGGTTTTTGCGCCAGGAGCTTGATCTTCGTTATGCAGTCCCATTTGGATTTTATCATGCTGCACTCAACTTTGGGGTCTCTGGGGGAGTGGTCTTTCCTTGGGGGAATGGGTTTTTGAACAAGCCCTCATCTCTTCCAGAGCGGTTCTTCTTAGGTGGTGATTTCTCTCCTGTTTGCACTCTTGGGGGCCCTGCAACTGTGTGGGGATTTAAAACAAGAGCACTAGGCCCTACCGAACCAAGAAGGCATGTCAGAGATAATTCTAATGATGAGAATTCAGAATCCTCTGGAAGGGATTTTGTTGGAGGAGATCTTGCTCTTTCTGCATTTGCAGACATTTCATTTGACCTTCCGTTGCGCTGGTTAAGAGAACGTGGAGTTCATGGACATGTTTTTGCGGGTGCGGGCAATGTAGCAAAACTGTCAGAGAACGAGTTCCGAAAGTTTTCCTTGCAGAGGTTCTTTGAGTCATTTCGAAGTTCAGTTGGAGCTGGGATTGTCATCCCCACAAAATTATTTCGCCTTGAGTGCAACTACTACTATATCCTGAAGCAATTTGAGCATGATGGCGGGAAGACTGGCTTCCGGTTTAGCATCTCAGCTCCATCATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0008150 GO:0009987 GO:0016043 GO:0042407 GO:0061024 GO:0071840
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bac_surface_Ag POTRA

Protein Analysis

543

Amino Acids

60.58

Weight (kDa)

5.48

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Omp85 PF01103 195 - 538 1.1e-27 Omp85 superfamily domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 750
AatII GACGTC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 1156
AccI GTMKAC 3 cut(s) 33, 483, 810
AccII CGCG 1 cut(s) 463
AclWI GGATC 2 cut(s) 437, 833
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 4 cut(s) 113, 583, 931, 1288
AcuI CTGAAG 1 cut(s) 1583
AcvI CACGTG 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 486
AfaI GTAC 2 cut(s) 829, 908
AfiI CCNNNNNNNGG 6 cut(s) 241, 643, 729, 953, 1305, 1470
AflIII ACRYGT 1 cut(s) 1402
AgeI ACCGGT 1 cut(s) 512
AgsI TTSAA 2 cut(s) 789, 1132
AjnI CCWGG 3 cut(s) 228, 791, 1026
Alw21I GWGCWC 3 cut(s) 273, 408, 1237
Alw26I GTCTC 2 cut(s) 488, 1096
Alw44I GTGCAC 1 cut(s) 269
AlwI GGATC 2 cut(s) 437, 833
Ama87I CYCGRG 2 cut(s) 368, 951
ApaI GGGCCC 1 cut(s) 1205
ApaLI GTGCAC 1 cut(s) 269
ApeKI GCWGC 5 cut(s) 169, 172, 457, 874, 1073
ApoI RAATTY 4 cut(s) 113, 583, 931, 1288
ArsI GACNNNNNNTTYG 4 cut(s) 98, 130, 1340, 1372
AsiGI ACCGGT 1 cut(s) 512
Asp700I GAANNNNTTC 2 cut(s) 1448, 1459
AspLEI GCGC 2 cut(s) 1026, 1374
AspS9I GGNCC 7 cut(s) 226, 232, 446, 629, 1201, 1202, 1241
AsuC2I CCSGG 2 cut(s) 92, 673
AsuHPI GGTGA 2 cut(s) 527, 1184
AsuII TTCGAA 2 cut(s) 117, 1489
AvaI CYCGRG 2 cut(s) 368, 951
AvaII GGWCC 2 cut(s) 232, 629
BaeGI GKGCMC 2 cut(s) 273, 1205
BalI TGGCCA 1 cut(s) 882
BanII GRGCYC 3 cut(s) 408, 771, 1205
BbrPI CACGTG 1 cut(s) 707
BbsI GAAGAC 1 cut(s) 1595
Bbv12I GWGCWC 3 cut(s) 273, 408, 1237
BbvCI CCTCAGC 1 cut(s) 561
BbvI GCAGC 5 cut(s) 156, 184, 444, 886, 1060
BccI CCATC 6 cut(s) 235, 241, 605, 850, 1574, 1627
BceAI ACGGC 1 cut(s) 166
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BciT130I CCWGG 3 cut(s) 230, 793, 1028
BclI TGATCA 1 cut(s) 282
BcnI CCSGG 2 cut(s) 92, 673
BcoDI GTCTC 2 cut(s) 488, 1096
BfaI CTAG 3 cut(s) 546, 975, 1238
BfmI CTRYAG 1 cut(s) 170
BglII AGATCT 2 cut(s) 548, 1324
Bme1390I CCNGG 5 cut(s) 92, 230, 673, 793, 1028
Bme18I GGWCC 2 cut(s) 232, 629
BmeT110I CYCGRG 2 cut(s) 368, 951
BmgT120I GGNCC 7 cut(s) 226, 232, 446, 629, 1201, 1202, 1241
BmiI GGNNCC 3 cut(s) 631, 1202, 1203
BmrFI CCNGG 5 cut(s) 92, 230, 673, 793, 1028
BmsI GCATC 2 cut(s) 805, 1617
BpiI GAAGAC 1 cut(s) 1595
BplI GAGNNNNNCTC 4 cut(s) 728, 760, 934, 966
BpmI CTGGAG 3 cut(s) 242, 350, 755
Bpu10I CCTNAGC 2 cut(s) 381, 561
Bpu14I TTCGAA 2 cut(s) 117, 1489
BpuEI CTTGAG 2 cut(s) 557, 1559
BpuMI CCSGG 2 cut(s) 92, 673
BsaAI YACGTR 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 1514
BsaHI GRCGYC 1 cut(s) 486
BsaI GGTCTC 1 cut(s) 1096
BsaJI CCNNGG 6 cut(s) 186, 303, 671, 817, 883, 1112
BsaWI WCCGGW 3 cut(s) 512, 1014, 1599
Bsc4I CCNNNNNNNGG 6 cut(s) 241, 643, 729, 953, 1305, 1470
Bse118I RCCGGY 2 cut(s) 512, 538
Bse1I ACTGG 1 cut(s) 1597
Bse3DI GCAATG 1 cut(s) 1429
Bse8I GATNNNNATC 1 cut(s) 1514
BseBI CCWGG 3 cut(s) 230, 793, 1028
BseDI CCNNGG 6 cut(s) 186, 303, 671, 817, 883, 1112
BseGI GGATG 5 cut(s) 100, 246, 616, 896, 1515
BseJI GATNNNNATC 1 cut(s) 1514
BseLI CCNNNNNNNGG 6 cut(s) 241, 643, 729, 953, 1305, 1470
BseMI GCAATG 1 cut(s) 1429
BseMII CTCAG 4 cut(s) 254, 489, 552, 1626
BseNI ACTGG 1 cut(s) 1597
BseRI GAGGAG 2 cut(s) 206, 1335
BseSI GKGCMC 2 cut(s) 273, 1205
BseXI GCAGC 5 cut(s) 156, 184, 444, 886, 1060
BseYI CCCAGC 3 cut(s) 632, 764, 1505
BsgI GTGCAG 1 cut(s) 1059
Bsh1236I CGCG 1 cut(s) 463
BshTI ACCGGT 1 cut(s) 512
BsiHKAI GWGCWC 3 cut(s) 273, 408, 1237
BsiHKCI CYCGRG 2 cut(s) 368, 951
BsiSI CCGG 8 cut(s) 92, 444, 452, 513, 539, 673, 1015, 1600
BslFI GGGAC 2 cut(s) 615, 1037
BslI CCNNNNNNNGG 6 cut(s) 241, 643, 729, 953, 1305, 1470
BsmAI GTCTC 2 cut(s) 488, 1096
BsmFI GGGAC 2 cut(s) 615, 1037
BsmI GAATGC 1 cut(s) 710
Bso31I GGTCTC 1 cut(s) 1096
BsoBI CYCGRG 2 cut(s) 368, 951
Bsp119I TTCGAA 2 cut(s) 117, 1489
Bsp120I GGGCCC 1 cut(s) 1201
Bsp1286I GDGCHC 5 cut(s) 273, 408, 771, 1205, 1237
Bsp143I GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
Bsp19I CCATGG 1 cut(s) 883
BspCNI CTCAG 4 cut(s) 255, 490, 553, 1625
BspFNI CGCG 1 cut(s) 463
BspHI TCATGA 1 cut(s) 799
BspLI GGNNCC 3 cut(s) 631, 1202, 1203
BspMAI CTGCAG 1 cut(s) 174
BspPI GGATC 2 cut(s) 437, 833
BspT104I TTCGAA 2 cut(s) 117, 1489
BspTNI GGTCTC 1 cut(s) 1096
BsrBI CCGCTC 1 cut(s) 1156
BsrDI GCAATG 1 cut(s) 1429
BsrFI RCCGGY 2 cut(s) 512, 538
BsrI ACTGG 1 cut(s) 1597
BssAI RCCGGY 2 cut(s) 512, 538
BssECI CCNNGG 6 cut(s) 186, 303, 671, 817, 883, 1112
BssMI GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
BssNAI GTATAC 1 cut(s) 811
BssNI GRCGYC 1 cut(s) 486
BssT1I CCWWGG 4 cut(s) 303, 817, 883, 1112
Bst1107I GTATAC 1 cut(s) 811
Bst2UI CCWGG 3 cut(s) 230, 793, 1028
Bst4CI ACNGT 3 cut(s) 1004, 1213, 1437
Bst6I CTCTTC 1 cut(s) 1152
BstACI GRCGYC 1 cut(s) 486
BstBAI YACGTR 1 cut(s) 707
BstBI TTCGAA 2 cut(s) 117, 1489
BstC8I GCNNGC 3 cut(s) 449, 540, 1420
BstDEI CTNAG 8 cut(s) 263, 381, 498, 534, 561, 776, 1165, 1612
BstDSI CCRYGG 1 cut(s) 883
BstENI CCTNNNNNAGG 2 cut(s) 1303, 1468
BstF5I GGATG 5 cut(s) 100, 246, 616, 896, 1515
BstFNI CGCG 1 cut(s) 463
BstHHI GCGC 2 cut(s) 1026, 1374
BstKTI GATC 8 cut(s) 262, 285, 318, 432, 551, 841, 1039, 1327
BstMAI GTCTC 2 cut(s) 488, 1096
BstMBI GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
BstNI CCWGG 3 cut(s) 230, 793, 1028
BstNSI RCATGY 2 cut(s) 1265, 1406
BstSCI CCNGG 5 cut(s) 90, 228, 671, 791, 1026
BstSFI CTRYAG 1 cut(s) 170
BstSLI GKGCMC 2 cut(s) 273, 1205
BstUI CGCG 1 cut(s) 463
BstV1I GCAGC 5 cut(s) 156, 184, 444, 886, 1060
BstV2I GAAGAC 1 cut(s) 1595
BstX2I RGATCY 3 cut(s) 548, 838, 1324
BstYI RGATCY 3 cut(s) 548, 838, 1324
BstZ17I GTATAC 1 cut(s) 811
BtgI CCRYGG 1 cut(s) 883
BtsCI GGATG 5 cut(s) 100, 246, 616, 896, 1515
BtsI GCAGTG 1 cut(s) 197
BtsIMutI CAGTG 1 cut(s) 197
Cac8I GCNNGC 3 cut(s) 449, 540, 1420
CciI TCATGA 1 cut(s) 799
CfoI GCGC 2 cut(s) 1026, 1374
Cfr10I RCCGGY 2 cut(s) 512, 538
Cfr13I GGNCC 7 cut(s) 226, 232, 446, 629, 1201, 1202, 1241
Csp6I GTAC 2 cut(s) 828, 907
CspAI ACCGGT 1 cut(s) 512
CviAII CATG 8 cut(s) 800, 884, 980, 1070, 1262, 1397, 1403, 1577
CviQI GTAC 2 cut(s) 828, 907
DdeI CTNAG 8 cut(s) 263, 381, 498, 534, 561, 776, 1165, 1612
DpnI GATC 8 cut(s) 261, 284, 317, 431, 550, 840, 1038, 1326
DpnII GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
DraI TTTAAA 2 cut(s) 580, 1225
EaeI YGGCCR 1 cut(s) 880
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 406
Eco130I CCWWGG 4 cut(s) 303, 817, 883, 1112
Eco147I AGGCCT 1 cut(s) 374
Eco24I GRGCYC 3 cut(s) 408, 771, 1205
Eco31I GGTCTC 1 cut(s) 1096
Eco32I GATATC 1 cut(s) 412
Eco47I GGWCC 2 cut(s) 232, 629
Eco53kI GAGCTC 1 cut(s) 406
Eco57I CTGAAG 1 cut(s) 1583
Eco72I CACGTG 1 cut(s) 707
Eco88I CYCGRG 2 cut(s) 368, 951
EcoICRI GAGCTC 1 cut(s) 406
EcoNI CCTNNNNNAGG 2 cut(s) 1303, 1468
EcoO109I RGGNCCY 4 cut(s) 226, 1201, 1202, 1241
EcoRI GAATTC 2 cut(s) 113, 1288
EcoRII CCWGG 3 cut(s) 228, 791, 1026
EcoRV GATATC 1 cut(s) 412
EcoT14I CCWWGG 4 cut(s) 303, 817, 883, 1112
EcoT38I GRGCYC 3 cut(s) 408, 771, 1205
ErhI CCWWGG 4 cut(s) 303, 817, 883, 1112
FaeI CATG 8 cut(s) 803, 887, 983, 1073, 1265, 1400, 1406, 1580
FalI AAGNNNNNCTT 4 cut(s) 1448, 1480, 1580, 1612
FaqI GGGAC 2 cut(s) 615, 1037
FatI CATG 8 cut(s) 799, 883, 979, 1069, 1261, 1396, 1402, 1576
FauI CCCGC 4 cut(s) 456, 1405, 1411, 1577
FauNDI CATATG 1 cut(s) 625
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 3 cut(s) 33, 483, 810
FokI GGATG 5 cut(s) 107, 253, 623, 883, 1502
FriOI GRGCYC 3 cut(s) 408, 771, 1205
FspBI CTAG 3 cut(s) 546, 975, 1238
GlaI GCGC 2 cut(s) 1025, 1373
GsaI CCCAGC 3 cut(s) 636, 768, 1509
GsuI CTGGAG 3 cut(s) 242, 350, 755
HapII CCGG 8 cut(s) 92, 444, 452, 513, 539, 673, 1015, 1600
HhaI GCGC 2 cut(s) 1026, 1374
Hin1I GRCGYC 1 cut(s) 486
Hin1II CATG 8 cut(s) 803, 887, 983, 1073, 1265, 1400, 1406, 1580
Hin6I GCGC 2 cut(s) 1024, 1372
HinP1I GCGC 2 cut(s) 1024, 1372
HincII GTYRAC 2 cut(s) 34, 484
HindII GTYRAC 2 cut(s) 34, 484
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 6 cut(s) 8, 194, 419, 440, 1295, 1481
HpaII CCGG 8 cut(s) 92, 444, 452, 513, 539, 673, 1015, 1600
HphI GGTGA 2 cut(s) 527, 1184
Hpy166II GTNNAC 8 cut(s) 34, 271, 484, 518, 569, 811, 830, 909
Hpy188III TCNNGA 6 cut(s) 368, 493, 800, 1151, 1302, 1561
Hpy8I GTNNAC 8 cut(s) 34, 271, 484, 518, 569, 811, 830, 909
HpyAV CCTTC 7 cut(s) 205, 337, 725, 864, 1251, 1299, 1373
HpyCH4III ACNGT 3 cut(s) 1004, 1213, 1437
HpyCH4IV ACGT 4 cut(s) 474, 486, 706, 1387
HpyF3I CTNAG 8 cut(s) 263, 381, 498, 534, 561, 776, 1165, 1612
HpySE526I ACGT 4 cut(s) 474, 486, 706, 1387
Hsp92I GRCGYC 1 cut(s) 486
Hsp92II CATG 8 cut(s) 803, 887, 983, 1073, 1265, 1400, 1406, 1580
HspAI GCGC 2 cut(s) 1024, 1372
KroI GCCGGC 1 cut(s) 538
KroNI GCCGGC 1 cut(s) 540
Ksp22I TGATCA 1 cut(s) 282
Kzo9I GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
LmnI GCTCC 5 cut(s) 361, 454, 1030, 1502, 1621
Lsp1109I GCAGC 5 cut(s) 156, 184, 444, 886, 1060
LweI GCATC 2 cut(s) 805, 1617
MaeI CTAG 3 cut(s) 546, 975, 1238
MaeII ACGT 4 cut(s) 474, 486, 706, 1387
MaeIII GTNAC 4 cut(s) 195, 527, 688, 697
MalI GATC 8 cut(s) 261, 284, 317, 431, 550, 840, 1038, 1326
MbiI CCGCTC 1 cut(s) 1156
MboI GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
MflI RGATCY 3 cut(s) 548, 838, 1324
MhlI GDGCHC 5 cut(s) 273, 408, 771, 1205, 1237
MlsI TGGCCA 1 cut(s) 882
MluCI AATT 8 cut(s) 113, 583, 864, 931, 1273, 1288, 1526, 1568
MluNI TGGCCA 1 cut(s) 882
MlyI GAGTC 3 cut(s) 2, 203, 1490
MmeI TCCRAC 4 cut(s) 218, 986, 1297, 1480
Mox20I TGGCCA 1 cut(s) 882
MroNI GCCGGC 1 cut(s) 538
MroXI GAANNNNTTC 2 cut(s) 1448, 1459
MscI TGGCCA 1 cut(s) 882
MseI TTAA 4 cut(s) 399, 579, 1224, 1379
MslI CAYNNNNRTG 4 cut(s) 353, 801, 984, 1401
Msp20I TGGCCA 1 cut(s) 882
MspA1I CMGCKG 2 cut(s) 169, 560
MspI CCGG 8 cut(s) 92, 444, 452, 513, 539, 673, 1015, 1600
MspR9I CCNGG 5 cut(s) 92, 230, 673, 793, 1028
Mva1269I GAATGC 1 cut(s) 710
MvaI CCWGG 3 cut(s) 230, 793, 1028
MvnI CGCG 1 cut(s) 463
NaeI GCCGGC 1 cut(s) 540
NciI CCSGG 2 cut(s) 92, 673
NcoI CCATGG 1 cut(s) 883
NdeI CATATG 1 cut(s) 625
NdeII GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
NgoMIV GCCGGC 1 cut(s) 538
NlaIII CATG 8 cut(s) 803, 887, 983, 1073, 1265, 1400, 1406, 1580
NlaIV GGNNCC 3 cut(s) 631, 1202, 1203
NmeAIII GCCGAG 2 cut(s) 349, 501
NmuCI GTSAC 2 cut(s) 195, 697
NspI RCATGY 2 cut(s) 1265, 1406
NspV TTCGAA 2 cut(s) 117, 1489
PaeR7I CTCGAG 2 cut(s) 368, 951
PagI TCATGA 1 cut(s) 799
PceI AGGCCT 1 cut(s) 374
PciI ACATGT 1 cut(s) 1402
PcsI WCGNNNNNNNCGW 7 cut(s) 78, 114, 150, 414, 480, 486, 489
PctI GAATGC 1 cut(s) 710
PdiI GCCGGC 1 cut(s) 540
PdmI GAANNNNTTC 2 cut(s) 1448, 1459
PfeI GAWTC 3 cut(s) 419, 440, 1295
PflFI GACNNNGTC 1 cut(s) 488
PinAI ACCGGT 1 cut(s) 512
PleI GAGTC 3 cut(s) 2, 202, 1489
PmaCI CACGTG 1 cut(s) 707
PmlI CACGTG 1 cut(s) 707
PpsI GAGTC 3 cut(s) 2, 202, 1489
Ppu21I YACGTR 1 cut(s) 707
PscI ACATGT 1 cut(s) 1402
PsiI TTATAA 1 cut(s) 750
Psp124BI GAGCTC 1 cut(s) 408
Psp6I CCWGG 3 cut(s) 228, 791, 1026
PspCI CACGTG 1 cut(s) 707
PspFI CCCAGC 3 cut(s) 632, 764, 1505
PspGI CCWGG 3 cut(s) 228, 791, 1026
PspN4I GGNNCC 3 cut(s) 631, 1202, 1203
PspOMI GGGCCC 1 cut(s) 1201
PspPI GGNCC 7 cut(s) 226, 232, 446, 629, 1201, 1202, 1241
PspXI VCTCGAGB 1 cut(s) 951
PstI CTGCAG 1 cut(s) 174
PsuI RGATCY 3 cut(s) 548, 838, 1324
PsyI GACNNNGTC 1 cut(s) 488
PvuII CAGCTG 1 cut(s) 560
RsaI GTAC 2 cut(s) 829, 908
RsaNI GTAC 2 cut(s) 828, 907
RseI CAYNNNNRTG 4 cut(s) 353, 801, 984, 1401
SacI GAGCTC 1 cut(s) 408
SalI GTCGAC 2 cut(s) 32, 482
SaqAI TTAA 4 cut(s) 399, 579, 1224, 1379
Sau3AI GATC 8 cut(s) 259, 282, 315, 429, 548, 838, 1036, 1324
Sau96I GGNCC 7 cut(s) 226, 232, 446, 629, 1201, 1202, 1241
SchI GAGTC 3 cut(s) 2, 203, 1490
ScrFI CCNGG 5 cut(s) 92, 230, 673, 793, 1028
SduI GDGCHC 5 cut(s) 273, 408, 771, 1205, 1237
SfaNI GCATC 2 cut(s) 805, 1617
SfcI CTRYAG 1 cut(s) 170
Sfr274I CTCGAG 2 cut(s) 368, 951
SfuI TTCGAA 2 cut(s) 117, 1489
SgrDI CGTCGACG 1 cut(s) 482
SinI GGWCC 2 cut(s) 232, 629
SlaI CTCGAG 2 cut(s) 368, 951
SmiMI CAYNNNNRTG 4 cut(s) 353, 801, 984, 1401
SmlI CTYRAG 4 cut(s) 368, 572, 951, 1538
SmoI CTYRAG 4 cut(s) 368, 572, 951, 1538
Sse9I AATT 8 cut(s) 113, 583, 864, 931, 1273, 1288, 1526, 1568
SseBI AGGCCT 1 cut(s) 374
SspMI CTAG 3 cut(s) 546, 975, 1238
SstI GAGCTC 1 cut(s) 408
StuI AGGCCT 1 cut(s) 374
StyD4I CCNGG 5 cut(s) 90, 228, 671, 791, 1026
StyI CCWWGG 4 cut(s) 303, 817, 883, 1112
TaaI ACNGT 3 cut(s) 1004, 1213, 1437
TaiI ACGT 4 cut(s) 477, 489, 709, 1390
TasI AATT 8 cut(s) 113, 583, 864, 931, 1273, 1288, 1526, 1568
TatI WGTACW 1 cut(s) 906
TauI GCSGC 5 cut(s) 163, 166, 169, 463, 545
TfiI GAWTC 3 cut(s) 419, 440, 1295
Tru1I TTAA 4 cut(s) 399, 579, 1224, 1379
Tru9I TTAA 4 cut(s) 399, 579, 1224, 1379
TscAI CASTG 1 cut(s) 204
TseFI GTSAC 2 cut(s) 195, 697
TseI GCWGC 5 cut(s) 169, 172, 457, 874, 1073
Tsp45I GTSAC 2 cut(s) 195, 697
TspDTI ATGAA 5 cut(s) 111, 885, 924, 1344, 1385
TspGWI ACGGA 4 cut(s) 87, 224, 412, 1356
TspRI CASTG 1 cut(s) 204
Tth111I GACNNNGTC 1 cut(s) 488
VneI GTGCAC 1 cut(s) 269
VpaK11BI GGWCC 2 cut(s) 232, 629
XagI CCTNNNNNAGG 2 cut(s) 1303, 1468
XapI RAATTY 4 cut(s) 113, 583, 931, 1288
XceI RCATGY 2 cut(s) 1265, 1406
XhoI CTCGAG 2 cut(s) 368, 951
XmiI GTMKAC 3 cut(s) 33, 483, 810
XmnI GAANNNNTTC 2 cut(s) 1448, 1459
XspI CTAG 3 cut(s) 546, 975, 1238
ZraI GACGTC 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.