Sorting and assembly machinery
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11070 AT5G05520 |
| fragaria_vesca | FvH4_7g24890 FvH4_7g24890 |
| malus_domestica | MD01G1156600.v1.1 MD07G1225300.v1.1 |
| prunus_persica | Prupe.2G254100_v2.0.a1 Prupe.2G254100_v2.0.a1 |
| pyrus_communis | pycom07g20400 |
| rosa_chinensis | RchiOBHm_Chr1g0370771 |
| rosa_laevigata | RLG00000027011 |
| rosa_multiflora | Rmu_sc0009474.1_g000003 Rmu_sc0009615.1_g000003 Rmu_sc0029761.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00286250 |
| rosa_rugosa | Rorug01G0359500 Rorug01G0359600 |
| rosa_samantha | Rh1AG368700 Rh1BG332300 Rh1CG346200 Rh1DG363700 |
| rosa_wichuraiana | Rw1G032460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 738 |
| AarI | CACCTGC | 1 cut(s) | 1391 |
| Acc36I | ACCTGC | 1 cut(s) | 1391 |
| AccB1I | GGYRCC | 1 cut(s) | 1403 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 793 |
| AccBSI | CCGCTC | 1 cut(s) | 1144 |
| AccI | GTMKAC | 3 cut(s) | 75, 233, 798 |
| AccII | CGCG | 2 cut(s) | 696, 698 |
| AccIII | TCCGGA | 2 cut(s) | 500, 1440 |
| AclWI | GGATC | 4 cut(s) | 425, 562, 821, 1085 |
| AcsI | RAATTY | 3 cut(s) | 919, 1276, 1514 |
| AcuI | CTGAAG | 4 cut(s) | 371, 570, 1451, 1571 |
| AfaI | GTAC | 3 cut(s) | 203, 817, 896 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 175, 500, 631, 717, 793, 930, 941, 993 |
| AgsI | TTSAA | 4 cut(s) | 568, 667, 1120, 1213 |
| AjnI | CCWGG | 2 cut(s) | 216, 448 |
| AleI | CACNNNNGTG | 1 cut(s) | 972 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1365, 1397 |
| AluBI | AGCT | 7 cut(s) | 352, 385, 445, 548, 865, 1493, 1604 |
| AluI | AGCT | 7 cut(s) | 352, 385, 445, 548, 865, 1493, 1604 |
| Alw21I | GWGCWC | 1 cut(s) | 300 |
| Alw26I | GTCTC | 1 cut(s) | 476 |
| AlwI | GGATC | 4 cut(s) | 425, 562, 821, 1085 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 394 |
| Ama87I | CYCGRG | 1 cut(s) | 356 |
| Aor13HI | TCCGGA | 2 cut(s) | 500, 1440 |
| AoxI | GGCC | 6 cut(s) | 309, 360, 433, 840, 932, 1189 |
| ApeKI | GCWGC | 3 cut(s) | 352, 862, 1061 |
| ApoI | RAATTY | 3 cut(s) | 919, 1276, 1514 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1328, 1360 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 919, 1297, 1436 |
| AspLEI | GCGC | 2 cut(s) | 698, 747 |
| AspS9I | GGNCC | 7 cut(s) | 220, 256, 434, 617, 1190, 1229, 1381 |
| AsuC2I | CCSGG | 1 cut(s) | 1408 |
| AsuHPI | GGTGA | 3 cut(s) | 61, 975, 1172 |
| AsuII | TTCGAA | 1 cut(s) | 1477 |
| AvaI | CYCGRG | 1 cut(s) | 356 |
| AvaII | GGWCC | 5 cut(s) | 220, 256, 617, 1229, 1381 |
| BanI | GGYRCC | 1 cut(s) | 1403 |
| BanII | GRGCYC | 2 cut(s) | 494, 759 |
| BbsI | GAAGAC | 5 cut(s) | 120, 135, 141, 293, 1583 |
| Bbv12I | GWGCWC | 1 cut(s) | 300 |
| BbvI | GCAGC | 3 cut(s) | 339, 874, 1048 |
| BccI | CCATC | 3 cut(s) | 157, 593, 838 |
| BceAI | ACGGC | 2 cut(s) | 705, 1022 |
| BciT130I | CCWGG | 2 cut(s) | 218, 450 |
| BclI | TGATCA | 1 cut(s) | 270 |
| BcnI | CCSGG | 1 cut(s) | 1408 |
| BcoDI | GTCTC | 1 cut(s) | 476 |
| BfaI | CTAG | 4 cut(s) | 534, 846, 963, 1226 |
| BfmI | CTRYAG | 1 cut(s) | 1485 |
| BfuAI | ACCTGC | 1 cut(s) | 1391 |
| BglII | AGATCT | 1 cut(s) | 1312 |
| BisI | GCNGC | 7 cut(s) | 353, 363, 392, 531, 863, 1013, 1062 |
| BlsI | GCNGC | 7 cut(s) | 354, 364, 393, 532, 864, 1014, 1063 |
| Bme1390I | CCNGG | 3 cut(s) | 218, 450, 1408 |
| Bme18I | GGWCC | 5 cut(s) | 220, 256, 617, 1229, 1381 |
| BmeT110I | CYCGRG | 1 cut(s) | 356 |
| BmgT120I | GGNCC | 7 cut(s) | 220, 256, 434, 617, 1190, 1229, 1381 |
| BmiI | GGNNCC | 4 cut(s) | 257, 619, 1382, 1405 |
| BmrFI | CCNGG | 3 cut(s) | 218, 450, 1408 |
| BmsI | GCATC | 1 cut(s) | 1605 |
| BpiI | GAAGAC | 5 cut(s) | 120, 135, 141, 293, 1583 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 922, 954 |
| BpmI | CTGGAG | 4 cut(s) | 230, 416, 743, 1155 |
| Bpu14I | TTCGAA | 1 cut(s) | 1477 |
| BpuEI | CTTGAG | 2 cut(s) | 924, 1547 |
| BpuMI | CCSGG | 1 cut(s) | 1408 |
| BsaI | GGTCTC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 4 cut(s) | 174, 1100, 1384, 1570 |
| BsaWI | WCCGGW | 3 cut(s) | 225, 500, 1440 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 29, 170, 200, 1482, 1512 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 175, 500, 631, 717, 793, 930, 941, 993 |
| Bse118I | RCCGGY | 2 cut(s) | 526, 644 |
| Bse1I | ACTGG | 4 cut(s) | 213, 1114, 1172, 1585 |
| BseAI | TCCGGA | 2 cut(s) | 500, 1440 |
| BseBI | CCWGG | 2 cut(s) | 218, 450 |
| BseDI | CCNNGG | 4 cut(s) | 174, 1100, 1384, 1570 |
| BseGI | GGATG | 4 cut(s) | 234, 604, 776, 1130 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 175, 500, 631, 717, 793, 930, 941, 993 |
| BseMII | CTCAG | 4 cut(s) | 24, 242, 1419, 1614 |
| BseNI | ACTGG | 4 cut(s) | 213, 1114, 1172, 1585 |
| BseRI | GAGGAG | 2 cut(s) | 191, 1323 |
| BseXI | GCAGC | 3 cut(s) | 339, 874, 1048 |
| BseYI | CCCAGC | 3 cut(s) | 365, 620, 1493 |
| BsgI | GTGCAG | 1 cut(s) | 1047 |
| Bsh1236I | CGCG | 2 cut(s) | 696, 698 |
| Bsh1285I | CGRYCG | 1 cut(s) | 237 |
| BshFI | GGCC | 6 cut(s) | 311, 362, 435, 842, 934, 1191 |
| BshNI | GGYRCC | 1 cut(s) | 1403 |
| BsiEI | CGRYCG | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 1 cut(s) | 300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 356 |
| BsiSI | CCGG | 7 cut(s) | 226, 440, 501, 527, 645, 1407, 1441 |
| BslFI | GGGAC | 6 cut(s) | 42, 603, 1025, 1120, 1236, 1439 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 175, 500, 631, 717, 793, 930, 941, 993 |
| BsmAI | GTCTC | 1 cut(s) | 476 |
| BsmFI | GGGAC | 6 cut(s) | 42, 603, 1025, 1120, 1236, 1439 |
| BsnI | GGCC | 6 cut(s) | 311, 362, 435, 842, 934, 1191 |
| Bso31I | GGTCTC | 1 cut(s) | 476 |
| BsoBI | CYCGRG | 1 cut(s) | 356 |
| Bsp119I | TTCGAA | 1 cut(s) | 1477 |
| Bsp1286I | GDGCHC | 3 cut(s) | 300, 494, 759 |
| Bsp13I | TCCGGA | 2 cut(s) | 500, 1440 |
| Bsp19I | CCATGG | 2 cut(s) | 1100, 1384 |
| BspANI | GGCC | 6 cut(s) | 311, 362, 435, 842, 934, 1191 |
| BspCNI | CTCAG | 4 cut(s) | 23, 243, 1420, 1613 |
| BspEI | TCCGGA | 2 cut(s) | 500, 1440 |
| BspFNI | CGCG | 2 cut(s) | 696, 698 |
| BspLI | GGNNCC | 4 cut(s) | 257, 619, 1382, 1405 |
| BspMI | ACCTGC | 1 cut(s) | 1391 |
| BspPI | GGATC | 4 cut(s) | 425, 562, 821, 1085 |
| BspT104I | TTCGAA | 1 cut(s) | 1477 |
| BspT107I | GGYRCC | 1 cut(s) | 1403 |
| BspTNI | GGTCTC | 1 cut(s) | 476 |
| BsrBI | CCGCTC | 1 cut(s) | 1144 |
| BsrFI | RCCGGY | 2 cut(s) | 526, 644 |
| BsrI | ACTGG | 4 cut(s) | 213, 1114, 1172, 1585 |
| BssAI | RCCGGY | 2 cut(s) | 526, 644 |
| BssECI | CCNNGG | 4 cut(s) | 174, 1100, 1384, 1570 |
| BssNAI | GTATAC | 1 cut(s) | 799 |
| BssT1I | CCWWGG | 2 cut(s) | 1100, 1384 |
| Bst1107I | GTATAC | 1 cut(s) | 799 |
| Bst2UI | CCWGG | 2 cut(s) | 218, 450 |
| Bst4CI | ACNGT | 5 cut(s) | 73, 186, 1183, 1201, 1571 |
| Bst6I | CTCTTC | 2 cut(s) | 736, 1288 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 352 |
| BstBI | TTCGAA | 1 cut(s) | 1477 |
| BstC8I | GCNNGC | 4 cut(s) | 192, 437, 528, 694 |
| BstDEI | CTNAG | 5 cut(s) | 10, 251, 291, 1428, 1600 |
| BstDSI | CCRYGG | 3 cut(s) | 1100, 1384, 1570 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 173 |
| BstF5I | GGATG | 4 cut(s) | 234, 604, 776, 1130 |
| BstFNI | CGCG | 2 cut(s) | 696, 698 |
| BstHHI | GCGC | 2 cut(s) | 698, 747 |
| BstMAI | GTCTC | 1 cut(s) | 476 |
| BstMCI | CGRYCG | 1 cut(s) | 237 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 154, 352, 371, 391, 1009, 1325, 1530, 1561 |
| BstNI | CCWGG | 2 cut(s) | 218, 450 |
| BstNSI | RCATGY | 2 cut(s) | 751, 1253 |
| BstSCI | CCNGG | 3 cut(s) | 216, 448, 1406 |
| BstSFI | CTRYAG | 1 cut(s) | 1485 |
| BstUI | CGCG | 2 cut(s) | 696, 698 |
| BstV1I | GCAGC | 3 cut(s) | 339, 874, 1048 |
| BstV2I | GAAGAC | 5 cut(s) | 120, 135, 141, 293, 1583 |
| BstX2I | RGATCY | 3 cut(s) | 826, 1077, 1312 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1362 |
| BstYI | RGATCY | 3 cut(s) | 826, 1077, 1312 |
| BstZ17I | GTATAC | 1 cut(s) | 799 |
| BsuRI | GGCC | 6 cut(s) | 311, 362, 435, 842, 934, 1191 |
| BtgI | CCRYGG | 3 cut(s) | 1100, 1384, 1570 |
| BtsCI | GGATG | 4 cut(s) | 234, 604, 776, 1130 |
| BtsIMutI | CAGTG | 4 cut(s) | 1179, 1206, 1254, 1266 |
| BveI | ACCTGC | 1 cut(s) | 1391 |
| Cac8I | GCNNGC | 4 cut(s) | 192, 437, 528, 694 |
| CaiI | CAGNNNCTG | 1 cut(s) | 394 |
| CfoI | GCGC | 2 cut(s) | 698, 747 |
| Cfr10I | RCCGGY | 2 cut(s) | 526, 644 |
| Cfr13I | GGNCC | 7 cut(s) | 220, 256, 434, 617, 1190, 1229, 1381 |
| CsiI | ACCWGGT | 1 cut(s) | 216 |
| Csp6I | GTAC | 3 cut(s) | 202, 816, 895 |
| CviQI | GTAC | 3 cut(s) | 202, 816, 895 |
| DdeI | CTNAG | 5 cut(s) | 10, 251, 291, 1428, 1600 |
| Eam1104I | CTCTTC | 2 cut(s) | 736, 1288 |
| EarI | CTCTTC | 2 cut(s) | 736, 1288 |
| EciI | GGCGGA | 1 cut(s) | 1511 |
| Eco130I | CCWWGG | 2 cut(s) | 1100, 1384 |
| Eco24I | GRGCYC | 2 cut(s) | 494, 759 |
| Eco31I | GGTCTC | 1 cut(s) | 476 |
| Eco47I | GGWCC | 5 cut(s) | 220, 256, 617, 1229, 1381 |
| Eco57I | CTGAAG | 4 cut(s) | 371, 570, 1451, 1571 |
| Eco88I | CYCGRG | 1 cut(s) | 356 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 173 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1229 |
| EcoRI | GAATTC | 1 cut(s) | 1276 |
| EcoRII | CCWGG | 2 cut(s) | 216, 448 |
| EcoT14I | CCWWGG | 2 cut(s) | 1100, 1384 |
| EcoT38I | GRGCYC | 2 cut(s) | 494, 759 |
| ErhI | CCWWGG | 2 cut(s) | 1100, 1384 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 284, 316, 1568, 1600 |
| FaqI | GGGAC | 6 cut(s) | 42, 603, 1025, 1120, 1236, 1439 |
| FauI | CCCGC | 1 cut(s) | 444 |
| FauNDI | CATATG | 1 cut(s) | 613 |
| FbaI | TGATCA | 1 cut(s) | 270 |
| FblI | GTMKAC | 3 cut(s) | 75, 233, 798 |
| Fnu4HI | GCNGC | 7 cut(s) | 353, 363, 392, 531, 863, 1013, 1062 |
| FokI | GGATG | 4 cut(s) | 241, 611, 763, 1117 |
| FriOI | GRGCYC | 2 cut(s) | 494, 759 |
| Fsp4HI | GCNGC | 7 cut(s) | 353, 363, 392, 531, 863, 1013, 1062 |
| FspBI | CTAG | 4 cut(s) | 534, 846, 963, 1226 |
| GlaI | GCGC | 2 cut(s) | 697, 746 |
| GluI | GCNGC | 7 cut(s) | 353, 363, 392, 531, 863, 1013, 1062 |
| GsaI | CCCAGC | 3 cut(s) | 369, 624, 1497 |
| GsuI | CTGGAG | 4 cut(s) | 230, 416, 743, 1155 |
| HaeIII | GGCC | 6 cut(s) | 311, 362, 435, 842, 934, 1191 |
| HapII | CCGG | 7 cut(s) | 226, 440, 501, 527, 645, 1407, 1441 |
| HhaI | GCGC | 2 cut(s) | 698, 747 |
| Hin6I | GCGC | 2 cut(s) | 696, 745 |
| HinP1I | GCGC | 2 cut(s) | 696, 745 |
| HincII | GTYRAC | 2 cut(s) | 76, 234 |
| HindII | GTYRAC | 2 cut(s) | 76, 234 |
| HindIII | AAGCTT | 1 cut(s) | 383 |
| HpaII | CCGG | 7 cut(s) | 226, 440, 501, 527, 645, 1407, 1441 |
| HphI | GGTGA | 3 cut(s) | 61, 975, 1172 |
| Hpy166II | GTNNAC | 6 cut(s) | 76, 223, 234, 259, 799, 897 |
| Hpy188I | TCNGA | 9 cut(s) | 13, 19, 175, 252, 270, 417, 634, 996, 1282 |
| Hpy188III | TCNNGA | 9 cut(s) | 425, 501, 1075, 1117, 1139, 1213, 1290, 1441, 1456 |
| Hpy8I | GTNNAC | 6 cut(s) | 76, 223, 234, 259, 799, 897 |
| Hpy99I | CGWCG | 7 cut(s) | 50, 77, 80, 83, 98, 113, 122 |
| HpyAV | CCTTC | 7 cut(s) | 116, 325, 545, 852, 1145, 1239, 1475 |
| HpyCH4III | ACNGT | 5 cut(s) | 73, 186, 1183, 1201, 1571 |
| HpyCH4IV | ACGT | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 5 cut(s) | 346, 1064, 1179, 1334, 1533 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 154, 352, 371, 391, 1009, 1325, 1530, 1561 |
| HpyF3I | CTNAG | 5 cut(s) | 10, 251, 291, 1428, 1600 |
| HpySE526I | ACGT | 1 cut(s) | 55 |
| HspAI | GCGC | 2 cut(s) | 696, 745 |
| Kpn2I | TCCGGA | 2 cut(s) | 500, 1440 |
| KroI | GCCGGC | 1 cut(s) | 526 |
| KroNI | GCCGGC | 1 cut(s) | 528 |
| Ksp22I | TGATCA | 1 cut(s) | 270 |
| LmnI | GCTCC | 4 cut(s) | 295, 442, 1490, 1609 |
| Lsp1109I | GCAGC | 3 cut(s) | 339, 874, 1048 |
| LweI | GCATC | 1 cut(s) | 1605 |
| MabI | ACCWGGT | 1 cut(s) | 216 |
| MaeI | CTAG | 4 cut(s) | 534, 846, 963, 1226 |
| MaeII | ACGT | 1 cut(s) | 55 |
| MaeIII | GTNAC | 4 cut(s) | 67, 685, 965, 1252 |
| MbiI | CCGCTC | 1 cut(s) | 1144 |
| MflI | RGATCY | 3 cut(s) | 826, 1077, 1312 |
| MhlI | GDGCHC | 3 cut(s) | 300, 494, 759 |
| MluCI | AATT | 9 cut(s) | 314, 465, 919, 1092, 1261, 1276, 1421, 1514, 1556 |
| MlyI | GAGTC | 2 cut(s) | 8, 252 |
| MroI | TCCGGA | 2 cut(s) | 500, 1440 |
| MroNI | GCCGGC | 1 cut(s) | 526 |
| MroXI | GAANNNNTTC | 3 cut(s) | 919, 1297, 1436 |
| MseI | TTAA | 7 cut(s) | 327, 561, 638, 677, 903, 1068, 1367 |
| MslI | CAYNNNNRTG | 2 cut(s) | 972, 1569 |
| MspA1I | CMGCKG | 3 cut(s) | 365, 391, 548 |
| MspI | CCGG | 7 cut(s) | 226, 440, 501, 527, 645, 1407, 1441 |
| MspR9I | CCNGG | 3 cut(s) | 218, 450, 1408 |
| MvaI | CCWGG | 2 cut(s) | 218, 450 |
| MvnI | CGCG | 2 cut(s) | 696, 698 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 154, 352, 371, 391, 1009, 1325, 1530, 1561 |
| NaeI | GCCGGC | 1 cut(s) | 528 |
| NciI | CCSGG | 1 cut(s) | 1408 |
| NcoI | CCATGG | 2 cut(s) | 1100, 1384 |
| NdeI | CATATG | 1 cut(s) | 613 |
| NgoMIV | GCCGGC | 1 cut(s) | 526 |
| NlaIV | GGNNCC | 4 cut(s) | 257, 619, 1382, 1405 |
| NmuCI | GTSAC | 4 cut(s) | 67, 685, 965, 1252 |
| NspI | RCATGY | 2 cut(s) | 751, 1253 |
| NspV | TTCGAA | 1 cut(s) | 1477 |
| OliI | CACNNNNGTG | 1 cut(s) | 972 |
| PaeR7I | CTCGAG | 1 cut(s) | 356 |
| PaqCI | CACCTGC | 1 cut(s) | 1391 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 45, 84, 108, 114, 117, 123, 695 |
| PdiI | GCCGGC | 1 cut(s) | 528 |
| PdmI | GAANNNNTTC | 3 cut(s) | 919, 1297, 1436 |
| PfeI | GAWTC | 8 cut(s) | 407, 428, 663, 1113, 1209, 1283, 1298, 1411 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 793 |
| PfoI | TCCNGGA | 1 cut(s) | 448 |
| PkrI | GCNGC | 7 cut(s) | 354, 364, 393, 532, 864, 1014, 1063 |
| PleI | GAGTC | 2 cut(s) | 8, 251 |
| PpsI | GAGTC | 2 cut(s) | 8, 251 |
| PpuMI | RGGWCCY | 1 cut(s) | 1229 |
| PsiI | TTATAA | 1 cut(s) | 738 |
| Psp5II | RGGWCCY | 1 cut(s) | 1229 |
| Psp6I | CCWGG | 2 cut(s) | 216, 448 |
| PspFI | CCCAGC | 3 cut(s) | 365, 620, 1493 |
| PspGI | CCWGG | 2 cut(s) | 216, 448 |
| PspN4I | GGNNCC | 4 cut(s) | 257, 619, 1382, 1405 |
| PspPI | GGNCC | 7 cut(s) | 220, 256, 434, 617, 1190, 1229, 1381 |
| PspPPI | RGGWCCY | 1 cut(s) | 1229 |
| PspXI | VCTCGAGB | 1 cut(s) | 356 |
| PstNI | CAGNNNCTG | 1 cut(s) | 394 |
| PsuI | RGATCY | 3 cut(s) | 826, 1077, 1312 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| PvuII | CAGCTG | 1 cut(s) | 548 |
| RsaI | GTAC | 3 cut(s) | 203, 817, 896 |
| RsaNI | GTAC | 3 cut(s) | 202, 816, 895 |
| RseI | CAYNNNNRTG | 2 cut(s) | 972, 1569 |
| SalI | GTCGAC | 2 cut(s) | 74, 232 |
| SaqAI | TTAA | 7 cut(s) | 327, 561, 638, 677, 903, 1068, 1367 |
| SatI | GCNGC | 7 cut(s) | 353, 363, 392, 531, 863, 1013, 1062 |
| Sau96I | GGNCC | 7 cut(s) | 220, 256, 434, 617, 1190, 1229, 1381 |
| SchI | GAGTC | 2 cut(s) | 8, 252 |
| ScrFI | CCNGG | 3 cut(s) | 218, 450, 1408 |
| SduI | GDGCHC | 3 cut(s) | 300, 494, 759 |
| SexAI | ACCWGGT | 1 cut(s) | 216 |
| SfaNI | GCATC | 1 cut(s) | 1605 |
| SfcI | CTRYAG | 1 cut(s) | 1485 |
| Sfr274I | CTCGAG | 1 cut(s) | 356 |
| SfuI | TTCGAA | 1 cut(s) | 1477 |
| SgrDI | CGTCGACG | 1 cut(s) | 74 |
| SinI | GGWCC | 5 cut(s) | 220, 256, 617, 1229, 1381 |
| SlaI | CTCGAG | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 972, 1569 |
| SmlI | CTYRAG | 3 cut(s) | 356, 939, 1526 |
| SmoI | CTYRAG | 3 cut(s) | 356, 939, 1526 |
| Sse9I | AATT | 9 cut(s) | 314, 465, 919, 1092, 1261, 1276, 1421, 1514, 1556 |
| SspMI | CTAG | 4 cut(s) | 534, 846, 963, 1226 |
| StyD4I | CCNGG | 3 cut(s) | 216, 448, 1406 |
| StyI | CCWWGG | 2 cut(s) | 1100, 1384 |
| TaaI | ACNGT | 5 cut(s) | 73, 186, 1183, 1201, 1571 |
| TaiI | ACGT | 1 cut(s) | 58 |
| TaqI | TCGA | 7 cut(s) | 75, 102, 233, 246, 306, 357, 1477 |
| TaqII | GACCGA | 2 cut(s) | 251, 857 |
| TasI | AATT | 9 cut(s) | 314, 465, 919, 1092, 1261, 1276, 1421, 1514, 1556 |
| TatI | WGTACW | 2 cut(s) | 201, 894 |
| TauI | GCSGC | 4 cut(s) | 365, 394, 533, 1015 |
| TfiI | GAWTC | 8 cut(s) | 407, 428, 663, 1113, 1209, 1283, 1298, 1411 |
| Tru1I | TTAA | 7 cut(s) | 327, 561, 638, 677, 903, 1068, 1367 |
| Tru9I | TTAA | 7 cut(s) | 327, 561, 638, 677, 903, 1068, 1367 |
| TscAI | CASTG | 4 cut(s) | 1186, 1206, 1261, 1273 |
| TseFI | GTSAC | 4 cut(s) | 67, 685, 965, 1252 |
| TseI | GCWGC | 3 cut(s) | 352, 862, 1061 |
| Tsp45I | GTSAC | 4 cut(s) | 67, 685, 965, 1252 |
| TspDTI | ATGAA | 4 cut(s) | 765, 873, 939, 1332 |
| TspRI | CASTG | 4 cut(s) | 1186, 1206, 1261, 1273 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 793 |
| VpaK11BI | GGWCC | 5 cut(s) | 220, 256, 617, 1229, 1381 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 173 |
| XapI | RAATTY | 3 cut(s) | 919, 1276, 1514 |
| XceI | RCATGY | 2 cut(s) | 751, 1253 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 466 |
| XhoI | CTCGAG | 1 cut(s) | 356 |
| XmiI | GTMKAC | 3 cut(s) | 75, 233, 798 |
| XmnI | GAANNNNTTC | 3 cut(s) | 919, 1297, 1436 |
| XspI | CTAG | 4 cut(s) | 534, 846, 963, 1226 |