Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009474.1

Orthogroup ID

OG0009225

Physical Location & Seq

Genomic Coordinates Reverse (-)

10534 .. 13653

Gene Structure 3120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009474.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

atggcggactctgaaaacctaaaccctaaagtcgaccccgaacaacaacccccctccaatctcaaccaaaacggacaccacgacgccgacccggaggaacccgatgacgacgaattcgaagaagaagcagacgaagaagaagacgacgacgacgacgacgacgacgaaccgccgcctccgctgcagcgaaagccgtcctcgggggagtcactgcgttcgtcgaaggccaagctggagggcctggtccgtcggatggagacggagaaagtcgatctgagggtgcacgatgttgtgatcagagggaacaccaagaccaaggagtatctgatcgaggccgagctcgaggggattaggaaggccacgactatgcaggagcttctcgaggcctcggctaaggccaatgccaagcttaaagagctcgatatcttcgattccgttcggatcacgcttgattccggcccgccggagctgccgcgaaccgccaacgtcctcgtcgacgtcgtcgagactgagagtgtgattactggtgaactcggttgttacactaagccggcggctagatcttggacagctgagggttcactcaagtttaaaaatttgtttggatatggggatatgtgggatggttctttggcatatggtcccagccaaacatcggaaataagtgctggtgtgcttttaccccggttcaaaggatttgtaactcctgtgacagcacgtgtattccttctttcccaagattggctggagttatcctcttataaagagcgaatggctgggctctcgcttagcttattttcaaccaggcatcatgatgttgaatacaaccttggttggcgtacacttacagatccatcacaaatggcctccaagtcaattagaaggcagcttggccatggcttactttcatccataaagtacacatttacacttgataggagaaattcatatttgaggccaactcgaggctattcttttgtttcttctagtcatgttggtggcctttcccctgatagtcggagtgtccggtttttgcgccaggagcttgatcttcgttatgcagtcccatttggattttatcatgctgcactcaactttggggtctctgggggagtggtctttccttgggggaatgggtttttgaacaagccctcatctcttccagagcggttcttcttaggtggtgatttctctcctgtttgcactcctgggggccctgcaacagtgtggggatttaaaacaagagcactaggccctactgaaccaagaaggcatgtcagagataattctaatgatgagaattcagaatcctctggaagggattttgttggaggagatcttgctctttctgcatttgcagacatttcatttgaccttccattgcgctggttaagagaacgcggagttcatggacatgtttttgcgggtgcggggaatgtagcaaaactgtcggagaacgagttccgaaaattttccttgcagaggttctttgagtcatttcgaagttcagttggagctgggattgtcatccccacaaaattatttcgccttgagtgcaactactactatatcctgaagcaatttgagcatgatggcggaaagactggctttcggtttagcatctcagctccatcattatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006996 GO:0007005 GO:0007006 GO:0007007 GO:0008150 GO:0009987 GO:0016043 GO:0042407 GO:0061024 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag POTRA

Protein Analysis

546

Amino Acids

60.87

Weight (kDa)

5.31

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11070 AT5G05520
fragaria_vesca	FvH4_7g24890 FvH4_7g24890
malus_domestica	MD01G1156600.v1.1 MD07G1225300.v1.1
prunus_persica	Prupe.2G254100_v2.0.a1 Prupe.2G254100_v2.0.a1
pyrus_communis	pycom07g20400
rosa_chinensis	RchiOBHm_Chr1g0370771
rosa_laevigata	RLG00000027011
rosa_multiflora	Rmu_sc0009474.1_g000003 Rmu_sc0009615.1_g000003 Rmu_sc0029761.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286250
rosa_rugosa	Rorug01G0359500 Rorug01G0359600
rosa_samantha	Rh1AG368700 Rh1BG332300 Rh1CG346200 Rh1DG363700
rosa_wichuraiana	Rw1G032460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	762
AatII	GACGTC	1 cut(s)	501
AccBSI	CCGCTC	1 cut(s)	1168
AccI	GTMKAC	2 cut(s)	33, 495
AccII	CGCG	2 cut(s)	475, 1401
AclWI	GGATC	2 cut(s)	449, 845
AcoI	YGGCCR	1 cut(s)	892
AcsI	RAATTY	5 cut(s)	113, 595, 943, 1300, 1469
AcuI	CTGAAG	1 cut(s)	1595
AcvI	CACGTG	1 cut(s)	719
AcyI	GRCGYC	2 cut(s)	84, 498
AfaI	GTAC	2 cut(s)	841, 920
AfiI	CCNNNNNNNGG	7 cut(s)	200, 253, 655, 741, 965, 1317, 1482
AflIII	ACRYGT	2 cut(s)	718, 1414
AgsI	TTSAA	4 cut(s)	691, 801, 821, 1144
AjnI	CCWGG	4 cut(s)	240, 803, 1038, 1207
AjuI	GAANNNNNNNTTGG	2 cut(s)	813, 845
AloI	GAACNNNNNNTCC	2 cut(s)	1445, 1477
Alw21I	GWGCWC	4 cut(s)	285, 342, 420, 1249
Alw26I	GTCTC	3 cut(s)	251, 500, 1108
Alw44I	GTGCAC	1 cut(s)	281
AlwI	GGATC	2 cut(s)	449, 845
Ama87I	CYCGRG	4 cut(s)	199, 341, 380, 963
ApaI	GGGCCC	1 cut(s)	1217
ApaLI	GTGCAC	1 cut(s)	281
ApeKI	GCWGC	5 cut(s)	181, 184, 469, 886, 1085
ApoI	RAATTY	5 cut(s)	113, 595, 943, 1300, 1469
ArsI	GACNNNNNNTTYG	4 cut(s)	98, 130, 1352, 1384
Asp700I	GAANNNNTTC	2 cut(s)	1460, 1471
AspLEI	GCGC	2 cut(s)	1038, 1386
AspS9I	GGNCC	7 cut(s)	238, 244, 458, 641, 1213, 1214, 1253
AsuC2I	CCSGG	2 cut(s)	92, 685
AsuHPI	GGTGA	2 cut(s)	539, 1196
AsuII	TTCGAA	2 cut(s)	117, 1501
AvaI	CYCGRG	4 cut(s)	199, 341, 380, 963
AvaII	GGWCC	2 cut(s)	244, 641
BaeGI	GKGCMC	2 cut(s)	285, 1217
BalI	TGGCCA	1 cut(s)	894
BanII	GRGCYC	4 cut(s)	342, 420, 783, 1217
BbrPI	CACGTG	1 cut(s)	719
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	4 cut(s)	285, 342, 420, 1249
BbvCI	CCTCAGC	1 cut(s)	573
BbvI	GCAGC	5 cut(s)	168, 196, 456, 898, 1072
BccI	CCATC	5 cut(s)	247, 617, 862, 1586, 1639
BceAI	ACGGC	1 cut(s)	178
BcgI	CGANNNNNNTGC	2 cut(s)	1431, 1465
BciT130I	CCWGG	4 cut(s)	242, 805, 1040, 1209
BclI	TGATCA	1 cut(s)	294
BcnI	CCSGG	2 cut(s)	92, 685
BcoDI	GTCTC	3 cut(s)	251, 500, 1108
BfaI	CTAG	3 cut(s)	558, 987, 1250
BfmI	CTRYAG	1 cut(s)	182
BglII	AGATCT	2 cut(s)	560, 1336
BisI	GCNGC	8 cut(s)	173, 182, 185, 470, 473, 555, 887, 1086
BlpI	GCTNAGC	1 cut(s)	788
BlsI	GCNGC	8 cut(s)	174, 183, 186, 471, 474, 556, 888, 1087
Bme1390I	CCNGG	6 cut(s)	92, 242, 685, 805, 1040, 1209
Bme18I	GGWCC	2 cut(s)	244, 641
BmeT110I	CYCGRG	4 cut(s)	199, 341, 380, 963
BmgT120I	GGNCC	7 cut(s)	238, 244, 458, 641, 1213, 1214, 1253
BmiI	GGNNCC	4 cut(s)	99, 643, 1214, 1215
BmrFI	CCNGG	6 cut(s)	92, 242, 685, 805, 1040, 1209
BmsI	GCATC	2 cut(s)	817, 1629
BpiI	GAAGAC	1 cut(s)	147
BplI	GAGNNNNNCTC	4 cut(s)	740, 772, 946, 978
BpmI	CTGGAG	2 cut(s)	254, 767
Bpu10I	CCTNAGC	2 cut(s)	393, 573
Bpu1102I	GCTNAGC	1 cut(s)	788
Bpu14I	TTCGAA	2 cut(s)	117, 1501
BpuEI	CTTGAG	2 cut(s)	569, 1571
BpuMI	CCSGG	2 cut(s)	92, 685
BsaAI	YACGTR	1 cut(s)	719
BsaBI	GATNNNNATC	1 cut(s)	1526
BsaHI	GRCGYC	2 cut(s)	84, 498
BsaI	GGTCTC	1 cut(s)	1108
BsaJI	CCNNGG	8 cut(s)	198, 315, 387, 683, 829, 895, 1124, 1208
BsaWI	WCCGGW	1 cut(s)	1026
BsaXI	ACNNNNNCTCC	2 cut(s)	1445, 1475
Bsc4I	CCNNNNNNNGG	7 cut(s)	200, 253, 655, 741, 965, 1317, 1482
Bse118I	RCCGGY	1 cut(s)	550
Bse1I	ACTGG	2 cut(s)	529, 1609
Bse3DI	GCAATG	1 cut(s)	1379
Bse8I	GATNNNNATC	1 cut(s)	1526
BseBI	CCWGG	4 cut(s)	242, 805, 1040, 1209
BseDI	CCNNGG	8 cut(s)	198, 315, 387, 683, 829, 895, 1124, 1208
BseGI	GGATG	4 cut(s)	258, 628, 908, 1527
BseJI	GATNNNNATC	1 cut(s)	1526
BseLI	CCNNNNNNNGG	7 cut(s)	200, 253, 655, 741, 965, 1317, 1482
BseMI	GCAATG	1 cut(s)	1379
BseMII	CTCAG	4 cut(s)	266, 501, 564, 1638
BseNI	ACTGG	2 cut(s)	529, 1609
BseRI	GAGGAG	1 cut(s)	1347
BseSI	GKGCMC	2 cut(s)	285, 1217
BseXI	GCAGC	5 cut(s)	168, 196, 456, 898, 1072
BseYI	CCCAGC	3 cut(s)	644, 776, 1517
BsgI	GTGCAG	1 cut(s)	1071
Bsh1236I	CGCG	2 cut(s)	475, 1401
BsiHKAI	GWGCWC	4 cut(s)	285, 342, 420, 1249
BsiHKCI	CYCGRG	4 cut(s)	199, 341, 380, 963
BsiSI	CCGG	6 cut(s)	92, 456, 464, 551, 685, 1027
BslFI	GGGAC	2 cut(s)	627, 1049
BslI	CCNNNNNNNGG	7 cut(s)	200, 253, 655, 741, 965, 1317, 1482
BsmAI	GTCTC	3 cut(s)	251, 500, 1108
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	2 cut(s)	627, 1049
Bso31I	GGTCTC	1 cut(s)	1108
BsoBI	CYCGRG	4 cut(s)	199, 341, 380, 963
Bsp119I	TTCGAA	2 cut(s)	117, 1501
Bsp120I	GGGCCC	1 cut(s)	1213
Bsp1286I	GDGCHC	6 cut(s)	285, 342, 420, 783, 1217, 1249
Bsp143I	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
Bsp1720I	GCTNAGC	1 cut(s)	788
Bsp19I	CCATGG	1 cut(s)	895
BspCNI	CTCAG	4 cut(s)	267, 502, 565, 1637
BspFNI	CGCG	2 cut(s)	475, 1401
BspHI	TCATGA	1 cut(s)	811
BspLI	GGNNCC	4 cut(s)	99, 643, 1214, 1215
BspMAI	CTGCAG	1 cut(s)	186
BspPI	GGATC	2 cut(s)	449, 845
BspT104I	TTCGAA	2 cut(s)	117, 1501
BspTNI	GGTCTC	1 cut(s)	1108
BsrBI	CCGCTC	1 cut(s)	1168
BsrDI	GCAATG	1 cut(s)	1379
BsrFI	RCCGGY	1 cut(s)	550
BsrI	ACTGG	2 cut(s)	529, 1609
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	8 cut(s)	198, 315, 387, 683, 829, 895, 1124, 1208
BssMI	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
BssNI	GRCGYC	2 cut(s)	84, 498
BssT1I	CCWWGG	4 cut(s)	315, 829, 895, 1124
Bst2UI	CCWGG	4 cut(s)	242, 805, 1040, 1209
Bst4CI	ACNGT	2 cut(s)	1225, 1449
Bst6I	CTCTTC	1 cut(s)	1164
BstACI	GRCGYC	2 cut(s)	84, 498
BstBAI	YACGTR	1 cut(s)	719
BstBI	TTCGAA	2 cut(s)	117, 1501
BstC8I	GCNNGC	2 cut(s)	461, 552
BstDEI	CTNAG	8 cut(s)	275, 393, 510, 546, 573, 788, 1177, 1624
BstDSI	CCRYGG	1 cut(s)	895
BstENI	CCTNNNNNAGG	2 cut(s)	1315, 1480
BstF5I	GGATG	4 cut(s)	258, 628, 908, 1527
BstFNI	CGCG	2 cut(s)	475, 1401
BstHHI	GCGC	2 cut(s)	1038, 1386
BstKTI	GATC	8 cut(s)	274, 297, 330, 444, 563, 853, 1051, 1339
BstMAI	GTCTC	3 cut(s)	251, 500, 1108
BstMBI	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 181, 190, 415, 469, 1042, 1349, 1554, 1585
BstNI	CCWGG	4 cut(s)	242, 805, 1040, 1209
BstNSI	RCATGY	2 cut(s)	1277, 1418
BstSCI	CCNGG	6 cut(s)	90, 240, 683, 803, 1038, 1207
BstSFI	CTRYAG	1 cut(s)	182
BstSLI	GKGCMC	2 cut(s)	285, 1217
BstUI	CGCG	2 cut(s)	475, 1401
BstV1I	GCAGC	5 cut(s)	168, 196, 456, 898, 1072
BstV2I	GAAGAC	1 cut(s)	147
BstX2I	RGATCY	3 cut(s)	560, 850, 1336
BstXI	CCANNNNNNTGG	1 cut(s)	1386
BstYI	RGATCY	3 cut(s)	560, 850, 1336
BtgI	CCRYGG	1 cut(s)	895
BtsCI	GGATG	4 cut(s)	258, 628, 908, 1527
BtsI	GCAGTG	1 cut(s)	209
BtsIMutI	CAGTG	2 cut(s)	209, 1230
Cac8I	GCNNGC	2 cut(s)	461, 552
CciI	TCATGA	1 cut(s)	811
CfoI	GCGC	2 cut(s)	1038, 1386
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	7 cut(s)	238, 244, 458, 641, 1213, 1214, 1253
CseI	GACGC	1 cut(s)	92
Csp6I	GTAC	2 cut(s)	840, 919
CviAII	CATG	8 cut(s)	812, 896, 992, 1082, 1274, 1409, 1415, 1589
CviQI	GTAC	2 cut(s)	840, 919
DdeI	CTNAG	8 cut(s)	275, 393, 510, 546, 573, 788, 1177, 1624
DpnI	GATC	8 cut(s)	273, 296, 329, 443, 562, 852, 1050, 1338
DpnII	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
DraI	TTTAAA	2 cut(s)	592, 1237
EaeI	YGGCCR	1 cut(s)	892
Eam1104I	CTCTTC	1 cut(s)	1164
EarI	CTCTTC	1 cut(s)	1164
EciI	GGCGGA	2 cut(s)	20, 1611
Ecl136II	GAGCTC	2 cut(s)	340, 418
Eco130I	CCWWGG	4 cut(s)	315, 829, 895, 1124
Eco147I	AGGCCT	1 cut(s)	386
Eco24I	GRGCYC	4 cut(s)	342, 420, 783, 1217
Eco31I	GGTCTC	1 cut(s)	1108
Eco32I	GATATC	1 cut(s)	424
Eco47I	GGWCC	2 cut(s)	244, 641
Eco53kI	GAGCTC	2 cut(s)	340, 418
Eco57I	CTGAAG	1 cut(s)	1595
Eco72I	CACGTG	1 cut(s)	719
Eco88I	CYCGRG	4 cut(s)	199, 341, 380, 963
EcoICRI	GAGCTC	2 cut(s)	340, 418
EcoNI	CCTNNNNNAGG	2 cut(s)	1315, 1480
EcoO109I	RGGNCCY	4 cut(s)	238, 1213, 1214, 1253
EcoRI	GAATTC	2 cut(s)	113, 1300
EcoRII	CCWGG	4 cut(s)	240, 803, 1038, 1207
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	4 cut(s)	315, 829, 895, 1124
EcoT38I	GRGCYC	4 cut(s)	342, 420, 783, 1217
ErhI	CCWWGG	4 cut(s)	315, 829, 895, 1124
Esp3I	CGTCTC	1 cut(s)	251
FaeI	CATG	8 cut(s)	815, 899, 995, 1085, 1277, 1412, 1418, 1592
FalI	AAGNNNNNCTT	2 cut(s)	1592, 1624
FaqI	GGGAC	2 cut(s)	627, 1049
FatI	CATG	8 cut(s)	811, 895, 991, 1081, 1273, 1408, 1414, 1588
FauI	CCCGC	3 cut(s)	468, 1417, 1423
FauNDI	CATATG	1 cut(s)	637
FbaI	TGATCA	1 cut(s)	294
FblI	GTMKAC	2 cut(s)	33, 495
Fnu4HI	GCNGC	8 cut(s)	173, 182, 185, 470, 473, 555, 887, 1086
FokI	GGATG	4 cut(s)	265, 635, 895, 1514
FriOI	GRGCYC	4 cut(s)	342, 420, 783, 1217
Fsp4HI	GCNGC	8 cut(s)	173, 182, 185, 470, 473, 555, 887, 1086
FspBI	CTAG	3 cut(s)	558, 987, 1250
GlaI	GCGC	2 cut(s)	1037, 1385
GluI	GCNGC	8 cut(s)	173, 182, 185, 470, 473, 555, 887, 1086
GsaI	CCCAGC	3 cut(s)	648, 780, 1521
GsuI	CTGGAG	2 cut(s)	254, 767
HapII	CCGG	6 cut(s)	92, 456, 464, 551, 685, 1027
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	2 cut(s)	1038, 1386
Hin1I	GRCGYC	2 cut(s)	84, 498
Hin1II	CATG	8 cut(s)	815, 899, 995, 1085, 1277, 1412, 1418, 1592
Hin6I	GCGC	2 cut(s)	1036, 1384
HinP1I	GCGC	2 cut(s)	1036, 1384
HincII	GTYRAC	2 cut(s)	34, 496
HindII	GTYRAC	2 cut(s)	34, 496
HindIII	AAGCTT	1 cut(s)	407
HinfI	GANTC	6 cut(s)	8, 206, 431, 452, 1307, 1493
HpaII	CCGG	6 cut(s)	92, 456, 464, 551, 685, 1027
HphI	GGTGA	2 cut(s)	539, 1196
Hpy166II	GTNNAC	7 cut(s)	34, 283, 496, 530, 581, 842, 921
Hpy188III	TCNNGA	6 cut(s)	380, 505, 812, 1163, 1314, 1573
Hpy8I	GTNNAC	7 cut(s)	34, 283, 496, 530, 581, 842, 921
HpyAV	CCTTC	7 cut(s)	217, 349, 737, 876, 1263, 1311, 1385
HpyCH4III	ACNGT	2 cut(s)	1225, 1449
HpyCH4IV	ACGT	3 cut(s)	486, 498, 718
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 181, 190, 415, 469, 1042, 1349, 1554, 1585
HpyF3I	CTNAG	8 cut(s)	275, 393, 510, 546, 573, 788, 1177, 1624
HpySE526I	ACGT	3 cut(s)	486, 498, 718
Hsp92I	GRCGYC	2 cut(s)	84, 498
Hsp92II	CATG	8 cut(s)	815, 899, 995, 1085, 1277, 1412, 1418, 1592
HspAI	GCGC	2 cut(s)	1036, 1384
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
Ksp22I	TGATCA	1 cut(s)	294
Kzo9I	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
LmnI	GCTCC	5 cut(s)	373, 466, 1042, 1514, 1633
Lsp1109I	GCAGC	5 cut(s)	168, 196, 456, 898, 1072
LweI	GCATC	2 cut(s)	817, 1629
MaeI	CTAG	3 cut(s)	558, 987, 1250
MaeII	ACGT	3 cut(s)	486, 498, 718
MaeIII	GTNAC	4 cut(s)	207, 539, 700, 709
MalI	GATC	8 cut(s)	273, 296, 329, 443, 562, 852, 1050, 1338
MbiI	CCGCTC	1 cut(s)	1168
MboI	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
MflI	RGATCY	3 cut(s)	560, 850, 1336
MhlI	GDGCHC	6 cut(s)	285, 342, 420, 783, 1217, 1249
MlsI	TGGCCA	1 cut(s)	894
MluCI	AATT	9 cut(s)	113, 595, 876, 943, 1285, 1300, 1469, 1538, 1580
MluNI	TGGCCA	1 cut(s)	894
MlyI	GAGTC	3 cut(s)	2, 215, 1502
MmeI	TCCRAC	5 cut(s)	230, 998, 1309, 1431, 1492
Mox20I	TGGCCA	1 cut(s)	894
MroNI	GCCGGC	1 cut(s)	550
MroXI	GAANNNNTTC	2 cut(s)	1460, 1471
MscI	TGGCCA	1 cut(s)	894
MseI	TTAA	4 cut(s)	411, 591, 1236, 1391
MslI	CAYNNNNRTG	4 cut(s)	365, 813, 996, 1413
Msp20I	TGGCCA	1 cut(s)	894
MspA1I	CMGCKG	2 cut(s)	181, 572
MspI	CCGG	6 cut(s)	92, 456, 464, 551, 685, 1027
MspR9I	CCNGG	6 cut(s)	92, 242, 685, 805, 1040, 1209
MvaI	CCWGG	4 cut(s)	242, 805, 1040, 1209
MvnI	CGCG	2 cut(s)	475, 1401
MwoI	GCNNNNNNNGC	9 cut(s)	178, 181, 190, 415, 469, 1042, 1349, 1554, 1585
NaeI	GCCGGC	1 cut(s)	552
NciI	CCSGG	2 cut(s)	92, 685
NcoI	CCATGG	1 cut(s)	895
NdeI	CATATG	1 cut(s)	637
NdeII	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
NgoMIV	GCCGGC	1 cut(s)	550
NlaIII	CATG	8 cut(s)	815, 899, 995, 1085, 1277, 1412, 1418, 1592
NlaIV	GGNNCC	4 cut(s)	99, 643, 1214, 1215
NmeAIII	GCCGAG	2 cut(s)	361, 368
NmuCI	GTSAC	2 cut(s)	207, 709
NspI	RCATGY	2 cut(s)	1277, 1418
NspV	TTCGAA	2 cut(s)	117, 1501
PaeR7I	CTCGAG	3 cut(s)	341, 380, 963
PagI	TCATGA	1 cut(s)	811
PceI	AGGCCT	1 cut(s)	386
PciI	ACATGT	1 cut(s)	1414
PdiI	GCCGGC	1 cut(s)	552
PdmI	GAANNNNTTC	2 cut(s)	1460, 1471
PfeI	GAWTC	3 cut(s)	431, 452, 1307
PflFI	GACNNNGTC	1 cut(s)	500
PkrI	GCNGC	8 cut(s)	174, 183, 186, 471, 474, 556, 888, 1087
PleI	GAGTC	3 cut(s)	2, 214, 1501
PmaCI	CACGTG	1 cut(s)	719
PmlI	CACGTG	1 cut(s)	719
PpsI	GAGTC	3 cut(s)	2, 214, 1501
Ppu21I	YACGTR	1 cut(s)	719
PscI	ACATGT	1 cut(s)	1414
PsiI	TTATAA	1 cut(s)	762
Psp124BI	GAGCTC	2 cut(s)	342, 420
Psp6I	CCWGG	4 cut(s)	240, 803, 1038, 1207
PspCI	CACGTG	1 cut(s)	719
PspFI	CCCAGC	3 cut(s)	644, 776, 1517
PspGI	CCWGG	4 cut(s)	240, 803, 1038, 1207
PspN4I	GGNNCC	4 cut(s)	99, 643, 1214, 1215
PspOMI	GGGCCC	1 cut(s)	1213
PspPI	GGNCC	7 cut(s)	238, 244, 458, 641, 1213, 1214, 1253
PspXI	VCTCGAGB	2 cut(s)	341, 963
PstI	CTGCAG	1 cut(s)	186
PsuI	RGATCY	3 cut(s)	560, 850, 1336
PsyI	GACNNNGTC	1 cut(s)	500
PvuII	CAGCTG	1 cut(s)	572
RsaI	GTAC	2 cut(s)	841, 920
RsaNI	GTAC	2 cut(s)	840, 919
RseI	CAYNNNNRTG	4 cut(s)	365, 813, 996, 1413
SacI	GAGCTC	2 cut(s)	342, 420
SalI	GTCGAC	2 cut(s)	32, 494
SaqAI	TTAA	4 cut(s)	411, 591, 1236, 1391
SatI	GCNGC	8 cut(s)	173, 182, 185, 470, 473, 555, 887, 1086
Sau3AI	GATC	8 cut(s)	271, 294, 327, 441, 560, 850, 1048, 1336
Sau96I	GGNCC	7 cut(s)	238, 244, 458, 641, 1213, 1214, 1253
SchI	GAGTC	3 cut(s)	2, 215, 1502
ScrFI	CCNGG	6 cut(s)	92, 242, 685, 805, 1040, 1209
SduI	GDGCHC	6 cut(s)	285, 342, 420, 783, 1217, 1249
SfaNI	GCATC	2 cut(s)	817, 1629
SfcI	CTRYAG	1 cut(s)	182
Sfr274I	CTCGAG	3 cut(s)	341, 380, 963
SfuI	TTCGAA	2 cut(s)	117, 1501
SgrDI	CGTCGACG	1 cut(s)	494
SinI	GGWCC	2 cut(s)	244, 641
SlaI	CTCGAG	3 cut(s)	341, 380, 963
SmiMI	CAYNNNNRTG	4 cut(s)	365, 813, 996, 1413
SmlI	CTYRAG	5 cut(s)	341, 380, 584, 963, 1550
SmoI	CTYRAG	5 cut(s)	341, 380, 584, 963, 1550
Sse9I	AATT	9 cut(s)	113, 595, 876, 943, 1285, 1300, 1469, 1538, 1580
SseBI	AGGCCT	1 cut(s)	386
SspMI	CTAG	3 cut(s)	558, 987, 1250
SstI	GAGCTC	2 cut(s)	342, 420
StuI	AGGCCT	1 cut(s)	386
StyD4I	CCNGG	6 cut(s)	90, 240, 683, 803, 1038, 1207
StyI	CCWWGG	4 cut(s)	315, 829, 895, 1124
TaaI	ACNGT	2 cut(s)	1225, 1449
TaiI	ACGT	3 cut(s)	489, 501, 721
TasI	AATT	9 cut(s)	113, 595, 876, 943, 1285, 1300, 1469, 1538, 1580
TatI	WGTACW	1 cut(s)	918
TauI	GCSGC	3 cut(s)	175, 475, 557
TfiI	GAWTC	3 cut(s)	431, 452, 1307
Tru1I	TTAA	4 cut(s)	411, 591, 1236, 1391
Tru9I	TTAA	4 cut(s)	411, 591, 1236, 1391
TscAI	CASTG	2 cut(s)	216, 1230
TseFI	GTSAC	2 cut(s)	207, 709
TseI	GCWGC	5 cut(s)	181, 184, 469, 886, 1085
Tsp45I	GTSAC	2 cut(s)	207, 709
TspDTI	ATGAA	4 cut(s)	897, 936, 1356, 1397
TspGWI	ACGGA	4 cut(s)	87, 236, 275, 424
TspRI	CASTG	2 cut(s)	216, 1230
Tth111I	GACNNNGTC	1 cut(s)	500
VneI	GTGCAC	1 cut(s)	281
VpaK11BI	GGWCC	2 cut(s)	244, 641
XagI	CCTNNNNNAGG	2 cut(s)	1315, 1480
XapI	RAATTY	5 cut(s)	113, 595, 943, 1300, 1469
XceI	RCATGY	2 cut(s)	1277, 1418
XhoI	CTCGAG	3 cut(s)	341, 380, 963
XmiI	GTMKAC	2 cut(s)	33, 495
XmnI	GAANNNNTTC	2 cut(s)	1460, 1471
XspI	CTAG	3 cut(s)	558, 987, 1250
ZraI	GACGTC	1 cut(s)	499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.