FvH4_7g25870
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
19694535 .. 19697969
3435 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g25870.t1

Sequence Viewer

Length: 1095 bp
ATGCAAGATCCGGCGAACCCGAAACCGGATCCGAACCCGGCGCCCACTCCGGACTCTTCCCGCGCCCCTATGACGACGTCGTTTCAGGACCCCTCCACCACCCCTAGCTTCCGCGGCTCCTACCACCGCCGCGCCCAGTCGGAGGTCCATTTCCGGATCCTCGACGACCTGGATCTGCTCCAGGACCCCTTCGACGGCCCATCCAACAGCTTCGAGGAGCTCGGCTCCGAAGACGACCTCTTCTGCACCTACATGGACATCGAGAAGCTCGGATCCAAACTTGAGGATGGATCCTCCGGCGGCCAGAAAGTTGAGAATGCCGGCGGCGGAGGTGCGGCGTCGCAGGCGGAGGCCGGCGAGGGGAGCAATGCGAGGCCGAGGCACCGGCATAGCAGCTCCATGGACGGGTCGTTGGAATCGATTGAGGCTAAGAAGGCCATGGCTCCTGAGAAGCTCGCTGAGCTTTGGGCCGTCGATCCCAAGCGAGCCAAGAGGATTTTGGCAAATCGGCAGTCTGCTGCTAGGTCAAAAGAGAGGAAGGCCCGGTATATATCAGAACTTGAAAGGAAAGTTCAGACACTTCAAACAGAAGCTACTACATTATCTGCTCAGCTCACTCTATTCCAGAGAGATACGACGGGATTATCTTCTGAGAACACAGAGCTTAAGATTCGGTTGCAAGCTATGGAACAACAAGCTCAGTTACGCGATGCTCTGAATGATGCGCTGAAGAAAGAACTTGAGAGGCTCAAGATTGCAACTGGAGAAGCATTAACACACACTGATTCGTACAACCTTGGGATGCATCATTTTCCATATTCGCAATCCTCCTTCTTTCCCGGTCAACCACAGTCTGGGCCACGCGATTCTCAGAACATTCAGCTACCACAGTATCATCAGTTCCAGTCTAATATGCAAGCTCCTCATCAGCCTATGCTTGGTGCATCAGCCCAGTCACATGCTTGCTCAGATATGTTGCAGCAGGATTCAATTGGCCGATTCCAGGGGCTTGACATCAATAACAGAGGGGGTTCTCATCTAGTGAAGCCTGAAGGCCCCTCTATATCTACTGGAGAAACCAATAGAAGATTCTGA

Protein Analysis

365

Amino Acids

40.09

Weight (kDa)

5.91

Isoelectric Point (pI)

59.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 159 - 208 5.2e-06 Basic region leucine zipper
bZIP_1 PF00170 161 - 218 1.2e-08 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
AccB1I GGYRCC 2 cut(s) 40, 381
AccB7I CCANNNNNTGG 1 cut(s) 854
AccII CGCG 5 cut(s) 63, 114, 132, 708, 864
AccIII TCCGGA 2 cut(s) 49, 153
AcoI YGGCCR 2 cut(s) 301, 994
AcuI CTGAAG 2 cut(s) 749, 1071
AcyI GRCGYC 3 cut(s) 41, 77, 338
AfaI GTAC 1 cut(s) 791
AfiI CCNNNNNNNGG 8 cut(s) 25, 142, 194, 360, 405, 854, 938, 1003
AflII CTTAAG 1 cut(s) 665
AgsI TTSAA 3 cut(s) 563, 584, 990
AjnI CCWGG 3 cut(s) 168, 180, 1002
AjuI GAANNNNNNNTTGG 1 cut(s) 1073
Alw21I GWGCWC 1 cut(s) 222
Aor13HI TCCGGA 2 cut(s) 49, 153
ApeKI GCWGC 3 cut(s) 393, 518, 979
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AspLEI GCGC 4 cut(s) 43, 65, 134, 727
AspS9I GGNCC 8 cut(s) 88, 145, 184, 197, 468, 541, 857, 1055
AsuC2I CCSGG 3 cut(s) 38, 544, 840
AvaII GGWCC 3 cut(s) 88, 145, 184
BaeI ACNNNNGTAYC 2 cut(s) 875, 908
BamHI GGATCC 4 cut(s) 28, 156, 272, 290
BanI GGYRCC 2 cut(s) 40, 381
BanII GRGCYC 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 237
Bbv12I GWGCWC 1 cut(s) 222
BbvI GCAGC 3 cut(s) 405, 505, 991
BccI CCATC 2 cut(s) 208, 281
BceAI ACGGC 2 cut(s) 211, 455
BciT130I CCWGG 3 cut(s) 170, 182, 1004
BcnI CCSGG 3 cut(s) 38, 544, 840
BfaI CTAG 3 cut(s) 105, 522, 1040
BfoI RGCGCY 1 cut(s) 44
BfrI CTTAAG 1 cut(s) 665
BisI GCNGC 8 cut(s) 115, 130, 301, 325, 336, 394, 519, 980
BlpI GCTNAGC 2 cut(s) 459, 609
BlsI GCNGC 8 cut(s) 116, 131, 302, 326, 337, 395, 520, 981
Bme1390I CCNGG 6 cut(s) 38, 170, 182, 544, 840, 1004
Bme18I GGWCC 3 cut(s) 88, 145, 184
BmgT120I GGNCC 8 cut(s) 88, 145, 184, 197, 468, 541, 857, 1055
BmrFI CCNGG 6 cut(s) 38, 170, 182, 544, 840, 1004
BmrI ACTGGG 2 cut(s) 130, 946
BmsI GCATC 5 cut(s) 700, 712, 792, 814, 953
BmuI ACTGGG 2 cut(s) 130, 946
BpiI GAAGAC 1 cut(s) 237
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 3 cut(s) 164, 783, 1092
Bpu1102I GCTNAGC 2 cut(s) 459, 609
BpuEI CTTGAG 3 cut(s) 302, 734, 761
BpuMI CCSGG 3 cut(s) 38, 544, 840
Bsa29I ATCGAT 1 cut(s) 419
BsaHI GRCGYC 3 cut(s) 41, 77, 338
BsaJI CCNNGG 6 cut(s) 112, 377, 399, 438, 796, 1003
BsaWI WCCGGW 3 cut(s) 25, 49, 153
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 142, 194, 360, 405, 854, 938, 1003
Bse118I RCCGGY 3 cut(s) 320, 353, 384
Bse1I ACTGG 5 cut(s) 136, 766, 904, 952, 1075
Bse3DI GCAATG 1 cut(s) 373
BseAI TCCGGA 2 cut(s) 49, 153
BseBI CCWGG 3 cut(s) 170, 182, 1004
BseCI ATCGAT 1 cut(s) 419
BseDI CCNNGG 6 cut(s) 112, 377, 399, 438, 796, 1003
BseGI GGATG 3 cut(s) 200, 292, 807
BseLI CCNNNNNNNGG 8 cut(s) 25, 142, 194, 360, 405, 854, 938, 1003
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 7 cut(s) 438, 450, 623, 642, 713, 884, 981
BseNI ACTGG 5 cut(s) 136, 766, 904, 952, 1075
BseRI GAGGAG 2 cut(s) 230, 912
BseXI GCAGC 3 cut(s) 405, 505, 991
BsgI GTGCAG 1 cut(s) 229
Bsh1236I CGCG 5 cut(s) 63, 114, 132, 708, 864
BshNI GGYRCC 2 cut(s) 40, 381
BshVI ATCGAT 1 cut(s) 419
BsiHKAI GWGCWC 1 cut(s) 222
BslI CCNNNNNNNGG 8 cut(s) 25, 142, 194, 360, 405, 854, 938, 1003
BsmI GAATGC 1 cut(s) 322
Bsp1286I GDGCHC 1 cut(s) 222
Bsp13I TCCGGA 2 cut(s) 49, 153
Bsp143I GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
Bsp1720I GCTNAGC 2 cut(s) 459, 609
Bsp19I CCATGG 2 cut(s) 399, 438
BspCNI CTCAG 7 cut(s) 439, 451, 622, 643, 712, 883, 980
BspDI ATCGAT 1 cut(s) 419
BspEI TCCGGA 2 cut(s) 49, 153
BspFNI CGCG 5 cut(s) 63, 114, 132, 708, 864
BspT107I GGYRCC 2 cut(s) 40, 381
BspTI CTTAAG 1 cut(s) 665
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 3 cut(s) 320, 353, 384
BsrI ACTGG 5 cut(s) 136, 766, 904, 952, 1075
BssAI RCCGGY 3 cut(s) 320, 353, 384
BssECI CCNNGG 6 cut(s) 112, 377, 399, 438, 796, 1003
BssMI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
BssNI GRCGYC 3 cut(s) 41, 77, 338
BssT1I CCWWGG 3 cut(s) 399, 438, 796
Bst2UI CCWGG 3 cut(s) 170, 182, 1004
Bst4CI ACNGT 2 cut(s) 852, 891
Bst6I CTCTTC 2 cut(s) 61, 245
BstACI GRCGYC 3 cut(s) 41, 77, 338
BstAFI CTTAAG 1 cut(s) 665
BstC8I GCNNGC 8 cut(s) 322, 345, 355, 456, 486, 681, 918, 964
BstDEI CTNAG 8 cut(s) 429, 447, 459, 609, 651, 699, 870, 967
BstDSI CCRYGG 3 cut(s) 112, 399, 438
BstF5I GGATG 3 cut(s) 200, 292, 807
BstFNI CGCG 5 cut(s) 63, 114, 132, 708, 864
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 4 cut(s) 43, 65, 134, 727
BstKTI GATC 7 cut(s) 10, 31, 159, 175, 275, 293, 478
BstMBI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
BstMWI GCNNNNNNNGC 5 cut(s) 114, 344, 363, 434, 460
BstNI CCWGG 3 cut(s) 170, 182, 1004
BstNSI RCATGY 1 cut(s) 962
BstSCI CCNGG 6 cut(s) 36, 168, 180, 542, 838, 1002
BstUI CGCG 5 cut(s) 63, 114, 132, 708, 864
BstV1I GCAGC 3 cut(s) 405, 505, 991
BstV2I GAAGAC 1 cut(s) 237
BstX2I RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
BstYI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
Bsu15I ATCGAT 1 cut(s) 419
BsuTUI ATCGAT 1 cut(s) 419
BtgI CCRYGG 3 cut(s) 112, 399, 438
BtgZI GCGATG 1 cut(s) 723
BtsCI GGATG 3 cut(s) 200, 292, 807
BtsIMutI CAGTG 1 cut(s) 780
Cac8I GCNNGC 8 cut(s) 322, 345, 355, 456, 486, 681, 918, 964
CfoI GCGC 4 cut(s) 43, 65, 134, 727
Cfr10I RCCGGY 3 cut(s) 320, 353, 384
Cfr13I GGNCC 8 cut(s) 88, 145, 184, 197, 468, 541, 857, 1055
Cfr42I CCGCGG 1 cut(s) 115
ClaI ATCGAT 1 cut(s) 419
CseI GACGC 1 cut(s) 327
Csp6I GTAC 1 cut(s) 790
CviAII CATG 4 cut(s) 253, 400, 439, 959
CviQI GTAC 1 cut(s) 790
DdeI CTNAG 8 cut(s) 429, 447, 459, 609, 651, 699, 870, 967
DinI GGCGCC 1 cut(s) 42
DpnI GATC 7 cut(s) 9, 30, 158, 174, 274, 292, 477
DpnII GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
EaeI YGGCCR 2 cut(s) 301, 994
Eam1104I CTCTTC 2 cut(s) 61, 245
EarI CTCTTC 2 cut(s) 61, 245
EciI GGCGGA 2 cut(s) 342, 362
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 3 cut(s) 399, 438, 796
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 3 cut(s) 88, 145, 184
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 749, 1071
EcoICRI GAGCTC 1 cut(s) 220
EcoO109I RGGNCCY 3 cut(s) 88, 184, 1055
EcoRII CCWGG 3 cut(s) 168, 180, 1002
EcoT14I CCWWGG 3 cut(s) 399, 438, 796
EcoT22I ATGCAT 1 cut(s) 807
EcoT38I GRGCYC 1 cut(s) 222
EgeI GGCGCC 1 cut(s) 42
EheI GGCGCC 1 cut(s) 42
ErhI CCWWGG 3 cut(s) 399, 438, 796
FaeI CATG 4 cut(s) 256, 403, 442, 962
FatI CATG 4 cut(s) 252, 399, 438, 958
FauI CCCGC 1 cut(s) 68
Fnu4HI GCNGC 8 cut(s) 115, 130, 301, 325, 336, 394, 519, 980
FokI GGATG 3 cut(s) 187, 299, 814
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 8 cut(s) 115, 130, 301, 325, 336, 394, 519, 980
FspBI CTAG 3 cut(s) 105, 522, 1040
GlaI GCGC 4 cut(s) 42, 64, 133, 726
GluI GCNGC 8 cut(s) 115, 130, 301, 325, 336, 394, 519, 980
GsuI CTGGAG 3 cut(s) 164, 783, 1092
HaeII RGCGCY 1 cut(s) 44
HgaI GACGC 1 cut(s) 327
HhaI GCGC 4 cut(s) 43, 65, 134, 727
Hin1I GRCGYC 3 cut(s) 41, 77, 338
Hin1II CATG 4 cut(s) 256, 403, 442, 962
Hin6I GCGC 4 cut(s) 41, 63, 132, 725
HinP1I GCGC 4 cut(s) 41, 63, 132, 725
HincII GTYRAC 1 cut(s) 845
HindII GTYRAC 1 cut(s) 845
HinfI GANTC 8 cut(s) 53, 416, 670, 785, 866, 986, 999, 1089
Hpy166II GTNNAC 1 cut(s) 845
Hpy188III TCNNGA 7 cut(s) 50, 86, 154, 262, 446, 625, 751
Hpy8I GTNNAC 1 cut(s) 845
Hpy99I CGWCG 7 cut(s) 79, 82, 167, 197, 343, 476, 640
HpyAV CCTTC 5 cut(s) 199, 427, 532, 841, 1046
HpyCH4III ACNGT 2 cut(s) 852, 891
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 8 cut(s) 4, 246, 679, 758, 805, 916, 944, 979
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 344, 363, 434, 460
HpyF3I CTNAG 8 cut(s) 429, 447, 459, 609, 651, 699, 870, 967
HpySE526I ACGT 1 cut(s) 77
Hsp92I GRCGYC 3 cut(s) 41, 77, 338
Hsp92II CATG 4 cut(s) 256, 403, 442, 962
HspAI GCGC 4 cut(s) 41, 63, 132, 725
KasI GGCGCC 1 cut(s) 40
Kpn2I TCCGGA 2 cut(s) 49, 153
KroI GCCGGC 2 cut(s) 320, 353
KroNI GCCGGC 2 cut(s) 322, 355
KspI CCGCGG 1 cut(s) 115
Kzo9I GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
LmnI GCTCC 8 cut(s) 122, 183, 217, 230, 363, 401, 448, 925
Lsp1109I GCAGC 3 cut(s) 405, 505, 991
LweI GCATC 5 cut(s) 700, 712, 792, 814, 953
MaeI CTAG 3 cut(s) 105, 522, 1040
MaeII ACGT 1 cut(s) 77
MaeIII GTNAC 2 cut(s) 702, 954
MalI GATC 7 cut(s) 9, 30, 158, 174, 274, 292, 477
MboI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
MboII GAAGA 5 cut(s) 48, 232, 242, 639, 742
MfeI CAATTG 1 cut(s) 990
MflI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
MhlI GDGCHC 1 cut(s) 222
MluCI AATT 1 cut(s) 990
Mly113I GGCGCC 1 cut(s) 41
MlyI GAGTC 1 cut(s) 47
MmeI TCCRAC 3 cut(s) 120, 228, 393
Mph1103I ATGCAT 1 cut(s) 807
MroI TCCGGA 2 cut(s) 49, 153
MroNI GCCGGC 2 cut(s) 320, 353
MseI TTAA 2 cut(s) 666, 773
MslI CAYNNNNRTG 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 114
MspCI CTTAAG 1 cut(s) 665
MspR9I CCNGG 6 cut(s) 38, 170, 182, 544, 840, 1004
MunI CAATTG 1 cut(s) 990
Mva1269I GAATGC 1 cut(s) 322
MvaI CCWGG 3 cut(s) 170, 182, 1004
MvnI CGCG 5 cut(s) 63, 114, 132, 708, 864
MwoI GCNNNNNNNGC 5 cut(s) 114, 344, 363, 434, 460
NaeI GCCGGC 2 cut(s) 322, 355
NarI GGCGCC 1 cut(s) 41
NciI CCSGG 3 cut(s) 38, 544, 840
NcoI CCATGG 2 cut(s) 399, 438
NdeII GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
NgoMIV GCCGGC 2 cut(s) 320, 353
NlaIII CATG 4 cut(s) 256, 403, 442, 962
NmeAIII GCCGAG 2 cut(s) 201, 402
NmuCI GTSAC 1 cut(s) 954
NsiI ATGCAT 1 cut(s) 807
NspI RCATGY 1 cut(s) 962
PcsI WCGNNNNNNNCGW 1 cut(s) 416
PctI GAATGC 1 cut(s) 322
PdiI GCCGGC 2 cut(s) 322, 355
PfeI GAWTC 7 cut(s) 416, 670, 785, 866, 986, 999, 1089
PflFI GACNNNGTC 1 cut(s) 76
PflMI CCANNNNNTGG 1 cut(s) 854
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 8 cut(s) 116, 131, 302, 326, 337, 395, 520, 981
PleI GAGTC 1 cut(s) 47
PluTI GGCGCC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 47
PpuMI RGGWCCY 2 cut(s) 88, 184
Psp124BI GAGCTC 1 cut(s) 222
Psp5II RGGWCCY 2 cut(s) 88, 184
Psp6I CCWGG 3 cut(s) 168, 180, 1002
PspGI CCWGG 3 cut(s) 168, 180, 1002
PspPI GGNCC 8 cut(s) 88, 145, 184, 197, 468, 541, 857, 1055
PspPPI RGGWCCY 2 cut(s) 88, 184
PsrI GAACNNNNNNTAC 2 cut(s) 884, 916
PsuI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
PsyI GACNNNGTC 1 cut(s) 76
RsaI GTAC 1 cut(s) 791
RsaNI GTAC 1 cut(s) 790
RseI CAYNNNNRTG 1 cut(s) 251
SacI GAGCTC 1 cut(s) 222
SacII CCGCGG 1 cut(s) 115
SaqAI TTAA 2 cut(s) 666, 773
SatI GCNGC 8 cut(s) 115, 130, 301, 325, 336, 394, 519, 980
Sau3AI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 475
Sau96I GGNCC 8 cut(s) 88, 145, 184, 197, 468, 541, 857, 1055
SchI GAGTC 1 cut(s) 47
ScrFI CCNGG 6 cut(s) 38, 170, 182, 544, 840, 1004
SduI GDGCHC 1 cut(s) 222
SfaNI GCATC 5 cut(s) 700, 712, 792, 814, 953
SfoI GGCGCC 1 cut(s) 42
Sfr303I CCGCGG 1 cut(s) 115
SgrBI CCGCGG 1 cut(s) 115
SinI GGWCC 3 cut(s) 88, 145, 184
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 4 cut(s) 281, 665, 740, 749
SmoI CTYRAG 4 cut(s) 281, 665, 740, 749
Sse9I AATT 1 cut(s) 990
SspDI GGCGCC 1 cut(s) 40
SspMI CTAG 3 cut(s) 105, 522, 1040
SstI GAGCTC 1 cut(s) 222
StyD4I CCNGG 6 cut(s) 36, 168, 180, 542, 838, 1002
StyI CCWWGG 3 cut(s) 399, 438, 796
TaaI ACNGT 2 cut(s) 852, 891
TaiI ACGT 1 cut(s) 80
TaqI TCGA 6 cut(s) 162, 192, 213, 261, 419, 474
TasI AATT 1 cut(s) 990
TauI GCSGC 5 cut(s) 117, 132, 303, 327, 338
TfiI GAWTC 7 cut(s) 416, 670, 785, 866, 986, 999, 1089
Tru1I TTAA 2 cut(s) 666, 773
Tru9I TTAA 2 cut(s) 666, 773
TscAI CASTG 1 cut(s) 787
TseFI GTSAC 1 cut(s) 954
TseI GCWGC 3 cut(s) 393, 518, 979
Tsp45I GTSAC 1 cut(s) 954
TspRI CASTG 1 cut(s) 787
Tth111I GACNNNGTC 1 cut(s) 76
Van91I CCANNNNNTGG 1 cut(s) 854
Vha464I CTTAAG 1 cut(s) 665
VpaK11BI GGWCC 3 cut(s) 88, 145, 184
XceI RCATGY 1 cut(s) 962
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XspI CTAG 3 cut(s) 105, 522, 1040
ZraI GACGTC 1 cut(s) 78
Zsp2I ATGCAT 1 cut(s) 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.