MD07G1233200.v1.1
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
30709210 .. 30712160
2951 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1233200.v1.1.491

Sequence Viewer

Length: 1077 bp
ATGCAAGATCCGGCCAACCCGAAACCGGATCCGAGCTCCAGCTCTCAGGACTCTCACCACCCACGCATGGCGCCGCCGTTTCCAGACACGACTCCGAGCGCCCCGTTCCGGGGCTCCTACCACCGTCGAACCCAATCCGAGGTTCATTTCCGGATCCCCGACGACCTGGATCTGCTCCAGGACCCGTCCGGCAGCTTCGAGGAGCTGGGTGGCTCCGAGGACGACATCTTCAGCACATACATGGACATGGAGAAGCTCGGATCCAAACTCGATGACGGACCCTCCGACGTGAAGCCCGAGAATGCCGACGGTTCCATGCAGGAGGAGGGAGGCGGCGGGTTTGGTGGGGAGATGAGCGCGAGGCCGAGGCACCGCCATAGCAACTCTGTCGACGCGTCTTTGGATAGCGTAGAGGCGAAGAAGGCCATGGCTCCCGATAAGCTCGCTGAGCTCTGGACCGTCGATCCCAAGCGAGCTAAGAGGATTTTGGCAAATCGGCAGTCTGCTGCTCGGTCAAAAGAGAGGAAGGCCCGGTACATATCAGAACTTGAAAGAAAAGTTCAAACGCTACAAACGGAAGCTACTACTCTATCAGCACAGCTGACTCTGTTCCAGAGAGATACATCAGGCTTATCTTCTGAGAACACAGAGCTTAAGCTTCGAGTGCAAGCTATGGAACAACAAGCTCAATTACGTGATGCTCTCAATGATGCACTGAAGAAAGAACTTGAGAGGCTCAAGGTTGCAACTGGAGAACAAATAACGCACACTGATTCATACAATCTGGGTATGCACCATTTTCCATATTCCCAGTCCCCGTTCTATTCCAATCAGGCACAGCCCGGGTCACGGGATTCCCAGAACATTCACATGCCACAGTTCCATCAATTCCAGCCTAATATGTCTGCTCACCATCAGCCTATGCTTGCATCATCCCAGTTGCATGCCTGCTCAGACATGTCGCAGCAGGATCCTATTGGCCGATTTCAGGGGCTTGACATCAATAACAGAGGTTCTCATCTAGTGAGACCTGAAGGGCCCTCAATATCTTCCGGCGAAAGCAACAGAAGATTTTAA

Protein Analysis

359

Amino Acids

39.91

Weight (kDa)

5.92

Isoelectric Point (pI)

61.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 155 - 204 3e-06 Basic region leucine zipper
bZIP_1 PF00170 157 - 215 4e-09 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 70, 369
AccI GTMKAC 1 cut(s) 390
AccII CGCG 2 cut(s) 359, 395
AccIII TCCGGA 1 cut(s) 150
AciI CCGC 4 cut(s) 74, 333, 336, 373
AcoI YGGCCR 2 cut(s) 12, 979
AcuI CTGAAG 3 cut(s) 214, 737, 1053
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 1 cut(s) 536
AfiI CCNNNNNNNGG 8 cut(s) 25, 67, 108, 109, 110, 139, 849, 988
AflII CTTAAG 1 cut(s) 653
AflIII ACRYGT 2 cut(s) 393, 957
AgsI TTSAA 2 cut(s) 551, 563
AjiI CACGTC 1 cut(s) 289
AjnI CCWGG 2 cut(s) 165, 177
AjuI GAANNNNNNNTTGG 2 cut(s) 126, 158
Alw21I GWGCWC 2 cut(s) 38, 453
Alw26I GTCTC 1 cut(s) 1021
Ama87I CYCGRG 2 cut(s) 296, 842
Aor13HI TCCGGA 1 cut(s) 150
AoxI GGCC 6 cut(s) 12, 362, 423, 528, 979, 1037
ApaI GGGCCC 1 cut(s) 1041
ApeKI GCWGC 3 cut(s) 192, 506, 964
ArsI GACNNNNNNTTYG 2 cut(s) 485, 517
AspLEI GCGC 3 cut(s) 73, 101, 359
AspS9I GGNCC 6 cut(s) 181, 278, 456, 529, 1037, 1038
AsuC2I CCSGG 4 cut(s) 110, 532, 843, 844
AsuHPI GGTGA 2 cut(s) 47, 902
AvaI CYCGRG 2 cut(s) 296, 842
AvaII GGWCC 3 cut(s) 181, 278, 456
BaeGI GKGCMC 1 cut(s) 1041
BamHI GGATCC 4 cut(s) 28, 153, 260, 970
BanI GGYRCC 2 cut(s) 70, 369
BanII GRGCYC 4 cut(s) 38, 116, 453, 1041
BarI GAAGNNNNNNTAC 2 cut(s) 518, 550
Bbv12I GWGCWC 2 cut(s) 38, 453
BbvI GCAGC 3 cut(s) 204, 493, 976
BccI CCATC 2 cut(s) 891, 921
BceAI ACGGC 1 cut(s) 61
BcgI CGANNNNNNTGC 2 cut(s) 370, 404
BciT130I CCWGG 2 cut(s) 167, 179
BcnI CCSGG 4 cut(s) 110, 532, 843, 844
BcoDI GTCTC 1 cut(s) 1021
BfaI CTAG 1 cut(s) 1022
BfoI RGCGCY 2 cut(s) 74, 102
BfrI CTTAAG 1 cut(s) 653
BisI GCNGC 5 cut(s) 74, 193, 334, 507, 965
BlpI GCTNAGC 1 cut(s) 447
BlsI GCNGC 5 cut(s) 75, 194, 335, 508, 966
Bme1390I CCNGG 6 cut(s) 110, 167, 179, 532, 843, 844
Bme18I GGWCC 3 cut(s) 181, 278, 456
BmeT110I CYCGRG 2 cut(s) 296, 842
BmgBI CACGTC 1 cut(s) 289
BmgT120I GGNCC 6 cut(s) 181, 278, 456, 529, 1037, 1038
BmrFI CCNGG 6 cut(s) 110, 167, 179, 532, 843, 844
BmrI ACTGGG 2 cut(s) 805, 931
BmsI GCATC 3 cut(s) 688, 700, 938
BmuI ACTGGG 2 cut(s) 805, 931
BpmI CTGGAG 3 cut(s) 22, 161, 771
Bpu1102I GCTNAGC 1 cut(s) 447
BpuEI CTTGAG 2 cut(s) 722, 749
BpuMI CCSGG 4 cut(s) 110, 532, 843, 844
BsaAI YACGTR 1 cut(s) 695
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 1021
BsaJI CCNNGG 6 cut(s) 109, 138, 216, 365, 426, 842
BsaWI WCCGGW 2 cut(s) 25, 150
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 67, 108, 109, 110, 139, 849, 988
Bse1I ACTGG 3 cut(s) 754, 811, 937
BseAI TCCGGA 1 cut(s) 150
BseBI CCWGG 2 cut(s) 167, 179
BseDI CCNNGG 6 cut(s) 109, 138, 216, 365, 426, 842
BseGI GGATG 1 cut(s) 932
BseLI CCNNNNNNNGG 8 cut(s) 25, 67, 108, 109, 110, 139, 849, 988
BseMII CTCAG 4 cut(s) 59, 438, 630, 966
BseNI ACTGG 3 cut(s) 754, 811, 937
BseRI GAGGAG 2 cut(s) 215, 338
BseSI GKGCMC 1 cut(s) 1041
BseXI GCAGC 3 cut(s) 204, 493, 976
BseYI CCCAGC 1 cut(s) 205
Bsh1236I CGCG 2 cut(s) 359, 395
BshFI GGCC 6 cut(s) 14, 364, 425, 530, 981, 1039
BshNI GGYRCC 2 cut(s) 70, 369
BsiHKAI GWGCWC 2 cut(s) 38, 453
BsiHKCI CYCGRG 2 cut(s) 296, 842
BsiSI CCGG 8 cut(s) 11, 26, 109, 151, 189, 532, 843, 1053
BslFI GGGAC 1 cut(s) 799
BslI CCNNNNNNNGG 8 cut(s) 25, 67, 108, 109, 110, 139, 849, 988
BsmAI GTCTC 1 cut(s) 1021
BsmFI GGGAC 1 cut(s) 799
BsmI GAATGC 1 cut(s) 307
BsnI GGCC 6 cut(s) 14, 364, 425, 530, 981, 1039
Bso31I GGTCTC 1 cut(s) 1021
BsoBI CYCGRG 2 cut(s) 296, 842
Bsp120I GGGCCC 1 cut(s) 1037
Bsp1286I GDGCHC 4 cut(s) 38, 116, 453, 1041
Bsp13I TCCGGA 1 cut(s) 150
Bsp143I GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
Bsp1720I GCTNAGC 1 cut(s) 447
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 4 cut(s) 74, 333, 336, 373
BspANI GGCC 6 cut(s) 14, 364, 425, 530, 981, 1039
BspCNI CTCAG 4 cut(s) 58, 439, 631, 965
BspEI TCCGGA 1 cut(s) 150
BspFNI CGCG 2 cut(s) 359, 395
BspT107I GGYRCC 2 cut(s) 70, 369
BspTI CTTAAG 1 cut(s) 653
BspTNI GGTCTC 1 cut(s) 1021
BsrI ACTGG 3 cut(s) 754, 811, 937
BssECI CCNNGG 6 cut(s) 109, 138, 216, 365, 426, 842
BssMI GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 2 cut(s) 167, 179
Bst4CI ACNGT 4 cut(s) 125, 311, 460, 879
BstACI GRCGYC 1 cut(s) 71
BstAFI CTTAAG 1 cut(s) 653
BstBAI YACGTR 1 cut(s) 695
BstC8I GCNNGC 6 cut(s) 444, 474, 669, 927, 945, 949
BstDEI CTNAG 5 cut(s) 45, 447, 477, 639, 952
BstDSI CCRYGG 1 cut(s) 426
BstF5I GGATG 1 cut(s) 932
BstFNI CGCG 2 cut(s) 359, 395
BstH2I RGCGCY 2 cut(s) 74, 102
BstHHI GCGC 3 cut(s) 73, 101, 359
BstKTI GATC 7 cut(s) 10, 31, 156, 172, 263, 466, 973
BstMAI GTCTC 1 cut(s) 1021
BstMBI GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
BstMWI GCNNNNNNNGC 3 cut(s) 422, 448, 664
BstNI CCWGG 2 cut(s) 167, 179
BstNSI RCATGY 3 cut(s) 874, 947, 961
BstSCI CCNGG 6 cut(s) 108, 165, 177, 530, 841, 842
BstSLI GKGCMC 1 cut(s) 1041
BstUI CGCG 2 cut(s) 359, 395
BstV1I GCAGC 3 cut(s) 204, 493, 976
BstX2I RGATCY 6 cut(s) 7, 28, 153, 169, 260, 970
BstYI RGATCY 6 cut(s) 7, 28, 153, 169, 260, 970
BsuRI GGCC 6 cut(s) 14, 364, 425, 530, 981, 1039
BtgI CCRYGG 1 cut(s) 426
BtrI CACGTC 1 cut(s) 289
BtsCI GGATG 1 cut(s) 932
BtsIMutI CAGTG 2 cut(s) 713, 768
Cac8I GCNNGC 6 cut(s) 444, 474, 669, 927, 945, 949
CfoI GCGC 3 cut(s) 73, 101, 359
Cfr13I GGNCC 6 cut(s) 181, 278, 456, 529, 1037, 1038
Cfr9I CCCGGG 1 cut(s) 842
CseI GACGC 2 cut(s) 384, 401
Csp6I GTAC 1 cut(s) 535
CviAII CATG 8 cut(s) 67, 241, 247, 316, 427, 871, 944, 958
CviQI GTAC 1 cut(s) 535
DdeI CTNAG 5 cut(s) 45, 447, 477, 639, 952
DinI GGCGCC 1 cut(s) 72
DpnI GATC 7 cut(s) 9, 30, 155, 171, 262, 465, 972
DpnII GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
EaeI YGGCCR 2 cut(s) 12, 979
Ecl136II GAGCTC 2 cut(s) 36, 451
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 4 cut(s) 38, 116, 453, 1041
Eco31I GGTCTC 1 cut(s) 1021
Eco47I GGWCC 3 cut(s) 181, 278, 456
Eco53kI GAGCTC 2 cut(s) 36, 451
Eco57I CTGAAG 3 cut(s) 214, 737, 1053
Eco88I CYCGRG 2 cut(s) 296, 842
EcoICRI GAGCTC 2 cut(s) 36, 451
EcoO109I RGGNCCY 3 cut(s) 181, 1037, 1038
EcoRII CCWGG 2 cut(s) 165, 177
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 4 cut(s) 38, 116, 453, 1041
EgeI GGCGCC 1 cut(s) 72
EheI GGCGCC 1 cut(s) 72
ErhI CCWWGG 1 cut(s) 426
FaeI CATG 8 cut(s) 70, 244, 250, 319, 430, 874, 947, 961
FaqI GGGAC 1 cut(s) 799
FatI CATG 8 cut(s) 66, 240, 246, 315, 426, 870, 943, 957
FauI CCCGC 1 cut(s) 329
FblI GTMKAC 1 cut(s) 390
Fnu4HI GCNGC 5 cut(s) 74, 193, 334, 507, 965
FokI GGATG 1 cut(s) 919
FriOI GRGCYC 4 cut(s) 38, 116, 453, 1041
Fsp4HI GCNGC 5 cut(s) 74, 193, 334, 507, 965
FspBI CTAG 1 cut(s) 1022
GlaI GCGC 3 cut(s) 72, 100, 358
GluI GCNGC 5 cut(s) 74, 193, 334, 507, 965
GsaI CCCAGC 1 cut(s) 209
GsuI CTGGAG 3 cut(s) 22, 161, 771
HaeII RGCGCY 2 cut(s) 74, 102
HaeIII GGCC 6 cut(s) 14, 364, 425, 530, 981, 1039
HapII CCGG 8 cut(s) 11, 26, 109, 151, 189, 532, 843, 1053
HgaI GACGC 2 cut(s) 384, 401
HhaI GCGC 3 cut(s) 73, 101, 359
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 8 cut(s) 70, 244, 250, 319, 430, 874, 947, 961
Hin6I GCGC 3 cut(s) 71, 99, 357
HinP1I GCGC 3 cut(s) 71, 99, 357
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 656
HinfI GANTC 5 cut(s) 50, 91, 604, 773, 854
HpaII CCGG 8 cut(s) 11, 26, 109, 151, 189, 532, 843, 1053
HphI GGTGA 2 cut(s) 47, 902
Hpy166II GTNNAC 1 cut(s) 391
Hpy188I TCNGA 9 cut(s) 33, 96, 139, 217, 260, 286, 544, 640, 955
Hpy188III TCNNGA 6 cut(s) 47, 83, 151, 434, 454, 613
Hpy8I GTNNAC 1 cut(s) 391
Hpy99I CGWCG 6 cut(s) 129, 164, 290, 311, 395, 464
HpyAV CCTTC 3 cut(s) 415, 520, 1028
HpyCH4III ACNGT 4 cut(s) 125, 311, 460, 879
HpyCH4IV ACGT 2 cut(s) 288, 694
HpyCH4V TGCA 8 cut(s) 4, 319, 667, 713, 746, 793, 929, 943
HpyF10VI GCNNNNNNNGC 3 cut(s) 422, 448, 664
HpyF3I CTNAG 5 cut(s) 45, 447, 477, 639, 952
HpySE526I ACGT 2 cut(s) 288, 694
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 8 cut(s) 70, 244, 250, 319, 430, 874, 947, 961
HspAI GCGC 3 cut(s) 71, 99, 357
KasI GGCGCC 1 cut(s) 70
Kpn2I TCCGGA 1 cut(s) 150
Kzo9I GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
LmnI GCTCC 6 cut(s) 41, 119, 180, 202, 218, 436
Lsp1109I GCAGC 3 cut(s) 204, 493, 976
LweI GCATC 3 cut(s) 688, 700, 938
MaeI CTAG 1 cut(s) 1022
MaeII ACGT 2 cut(s) 288, 694
MaeIII GTNAC 1 cut(s) 846
MalI GATC 7 cut(s) 9, 30, 155, 171, 262, 465, 972
MboI GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
MboII GAAGA 5 cut(s) 220, 430, 627, 730, 1041
MflI RGATCY 6 cut(s) 7, 28, 153, 169, 260, 970
MhlI GDGCHC 4 cut(s) 38, 116, 453, 1041
MluCI AATT 2 cut(s) 689, 887
MluI ACGCGT 1 cut(s) 393
Mly113I GGCGCC 1 cut(s) 71
MlyI GAGTC 3 cut(s) 44, 85, 598
MmeI TCCRAC 1 cut(s) 309
MroI TCCGGA 1 cut(s) 150
MseI TTAA 2 cut(s) 654, 1075
MslI CAYNNNNRTG 3 cut(s) 239, 245, 869
MspA1I CMGCKG 1 cut(s) 601
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 8 cut(s) 11, 26, 109, 151, 189, 532, 843, 1053
MspR9I CCNGG 6 cut(s) 110, 167, 179, 532, 843, 844
Mva1269I GAATGC 1 cut(s) 307
MvaI CCWGG 2 cut(s) 167, 179
MvnI CGCG 2 cut(s) 359, 395
MwoI GCNNNNNNNGC 3 cut(s) 422, 448, 664
NarI GGCGCC 1 cut(s) 71
NciI CCSGG 4 cut(s) 110, 532, 843, 844
NcoI CCATGG 1 cut(s) 426
NdeII GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
NlaIII CATG 8 cut(s) 70, 244, 250, 319, 430, 874, 947, 961
NmeAIII GCCGAG 1 cut(s) 390
NmuCI GTSAC 1 cut(s) 846
NspI RCATGY 3 cut(s) 874, 947, 961
PaeI GCATGC 1 cut(s) 947
PciI ACATGT 1 cut(s) 957
PcsI WCGNNNNNNNCGW 2 cut(s) 282, 294
PctI GAATGC 1 cut(s) 307
PfeI GAWTC 2 cut(s) 773, 854
PfoI TCCNGGA 1 cut(s) 177
PkrI GCNGC 5 cut(s) 75, 194, 335, 508, 966
PleI GAGTC 3 cut(s) 44, 85, 598
PluTI GGCGCC 1 cut(s) 74
PpsI GAGTC 3 cut(s) 44, 85, 598
Ppu21I YACGTR 1 cut(s) 695
PpuMI RGGWCCY 1 cut(s) 181
PscI ACATGT 1 cut(s) 957
Psp124BI GAGCTC 2 cut(s) 38, 453
Psp5II RGGWCCY 1 cut(s) 181
Psp6I CCWGG 2 cut(s) 165, 177
PspFI CCCAGC 1 cut(s) 205
PspGI CCWGG 2 cut(s) 165, 177
PspOMI GGGCCC 1 cut(s) 1037
PspPI GGNCC 6 cut(s) 181, 278, 456, 529, 1037, 1038
PspPPI RGGWCCY 1 cut(s) 181
PsuI RGATCY 6 cut(s) 7, 28, 153, 169, 260, 970
PvuII CAGCTG 1 cut(s) 601
RsaI GTAC 1 cut(s) 536
RsaNI GTAC 1 cut(s) 535
RseI CAYNNNNRTG 3 cut(s) 239, 245, 869
SacI GAGCTC 2 cut(s) 38, 453
SalI GTCGAC 1 cut(s) 389
SaqAI TTAA 2 cut(s) 654, 1075
SatI GCNGC 5 cut(s) 74, 193, 334, 507, 965
Sau3AI GATC 7 cut(s) 7, 28, 153, 169, 260, 463, 970
Sau96I GGNCC 6 cut(s) 181, 278, 456, 529, 1037, 1038
SchI GAGTC 3 cut(s) 44, 85, 598
ScrFI CCNGG 6 cut(s) 110, 167, 179, 532, 843, 844
SduI GDGCHC 4 cut(s) 38, 116, 453, 1041
SfaNI GCATC 3 cut(s) 688, 700, 938
SfoI GGCGCC 1 cut(s) 72
SinI GGWCC 3 cut(s) 181, 278, 456
SmaI CCCGGG 1 cut(s) 844
SmiMI CAYNNNNRTG 3 cut(s) 239, 245, 869
SmlI CTYRAG 3 cut(s) 653, 728, 737
SmoI CTYRAG 3 cut(s) 653, 728, 737
SphI GCATGC 1 cut(s) 947
Sse9I AATT 2 cut(s) 689, 887
SsiI CCGC 4 cut(s) 74, 333, 336, 373
SspDI GGCGCC 1 cut(s) 70
SspMI CTAG 1 cut(s) 1022
SstI GAGCTC 2 cut(s) 38, 453
StyD4I CCNGG 6 cut(s) 108, 165, 177, 530, 841, 842
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 4 cut(s) 125, 311, 460, 879
TaiI ACGT 2 cut(s) 291, 697
TaqI TCGA 6 cut(s) 127, 198, 270, 390, 462, 661
TaqII GACCGA 1 cut(s) 501
TasI AATT 2 cut(s) 689, 887
TauI GCSGC 2 cut(s) 76, 336
TfiI GAWTC 2 cut(s) 773, 854
Tru1I TTAA 2 cut(s) 654, 1075
Tru9I TTAA 2 cut(s) 654, 1075
TscAI CASTG 2 cut(s) 720, 775
TseFI GTSAC 1 cut(s) 846
TseI GCWGC 3 cut(s) 192, 506, 964
Tsp45I GTSAC 1 cut(s) 846
TspDTI ATGAA 2 cut(s) 134, 765
TspGWI ACGGA 2 cut(s) 291, 590
TspMI CCCGGG 1 cut(s) 842
TspRI CASTG 2 cut(s) 720, 775
Vha464I CTTAAG 1 cut(s) 653
VpaK11BI GGWCC 3 cut(s) 181, 278, 456
XceI RCATGY 3 cut(s) 874, 947, 961
XmaI CCCGGG 1 cut(s) 842
XmiI GTMKAC 1 cut(s) 390
XspI CTAG 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.