Rmu_sc0001755.1_g000022
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001755.1
Physical Location & Seq
Forward (+)
101240 .. 103918
2679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001755.1_g000022.1.cds

Sequence Viewer

Length: 1092 bp
atgcaagatccggcgaacccgaaaccggatccgaacccggccgtctcccaggactcttcccgcctccctatgacgacgtcgtttccggaccccaccccaagcctcaccctccgcggctcctaccaccggcgcgcccaatcggaggtccatttccggatccccgacgacctggatctgctgcaggaccccttcgacggcccatccgccagcttcgaggagctcggctccgaagacgacctcttctgcacctacatggacattgagaagctcggatccaagctcgaggatggatcctccggccccaaacccgagaatgccgccgggtcaacgtcgcaggcggaggccggctccggcgaggggagcagcgccaggccgaggcacaggcatagcagctccatggacgggtccttggaatcgatagaggctaagaaggccatggctcctgagaagctcgctgagctttgggccgtcgatcccaagcgagccaagaggattttggcaaatcggcagtctgctgctaggtcaaaagagaggaaggcccgatacatatcagaacttgaaaggaaagttcagacccttcaaacagaagcgactactctatctgctcaactcactttattccagagagatacaacgggattgtcttctgagaacacagagcttaagattcggttgcaagctatggaacaacaagctcagttacgcgatgctctgaatgatgcactgaagaaagaacttgagaggctcaagattgcaactggagaagcactaacacacactgattcttacaacctgggaatgcaccattttccatattcgcaatcctcctactttcccggtcagccacagtctgggtcacgtgattctcagaacattcagctgccacagtttcatcagttccagtctaatatgcaagctccgcatcagcctatgcttggtgcagcagcccaatcacatgcttgctcagagatgatgcagcaggattcaattggccgattccaggggctcgatatcaataacagaggaggttctcatctagtgaagcccgaaggcccctctatatctgctggagaaaccaatagaagattttga

Protein Analysis

363

Amino Acids

40.0

Weight (kDa)

5.91

Isoelectric Point (pI)

59.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 80
AccB7I CCANNNNNTGG 1 cut(s) 851
AccII CGCG 3 cut(s) 114, 132, 705
AccIII TCCGGA 2 cut(s) 85, 153
AciI CCGC 7 cut(s) 61, 112, 114, 204, 318, 338, 920
AcoI YGGCCR 2 cut(s) 39, 991
AcuI CTGAAG 1 cut(s) 746
AcvI CACGTG 1 cut(s) 860
AcyI GRCGYC 1 cut(s) 77
AflII CTTAAG 1 cut(s) 662
AgsI TTSAA 3 cut(s) 560, 581, 987
AjnI CCWGG 5 cut(s) 48, 168, 368, 792, 999
Alw21I GWGCWC 1 cut(s) 222
Alw26I GTCTC 1 cut(s) 49
Ama87I CYCGRG 2 cut(s) 281, 308
Aor13HI TCCGGA 2 cut(s) 85, 153
ApeKI GCWGC 8 cut(s) 178, 363, 390, 515, 880, 941, 944, 976
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AscI GGCGCGCC 1 cut(s) 130
AspLEI GCGC 3 cut(s) 132, 134, 368
AspS9I GGNCC 9 cut(s) 88, 145, 184, 197, 299, 405, 465, 538, 1052
AsuC2I CCSGG 3 cut(s) 38, 322, 837
AsuHPI GGTGA 1 cut(s) 97
AvaI CYCGRG 2 cut(s) 281, 308
AvaII GGWCC 4 cut(s) 88, 145, 184, 405
BamHI GGATCC 4 cut(s) 28, 156, 272, 290
BanII GRGCYC 2 cut(s) 222, 1008
BarI GAAGNNNNNNTAC 2 cut(s) 527, 559
BbrPI CACGTG 1 cut(s) 860
BbsI GAAGAC 2 cut(s) 237, 636
Bbv12I GWGCWC 1 cut(s) 222
BbvI GCAGC 8 cut(s) 165, 375, 402, 502, 867, 953, 956, 988
BccI CCATC 2 cut(s) 208, 281
BceAI ACGGC 3 cut(s) 26, 211, 452
BciT130I CCWGG 5 cut(s) 50, 170, 370, 794, 1001
BcnI CCSGG 3 cut(s) 38, 322, 837
BcoDI GTCTC 1 cut(s) 49
BfaI CTAG 2 cut(s) 519, 1037
BfmI CTRYAG 1 cut(s) 179
BfoI RGCGCY 1 cut(s) 369
BfrI CTTAAG 1 cut(s) 662
BlpI GCTNAGC 1 cut(s) 456
Bme1390I CCNGG 8 cut(s) 38, 50, 170, 322, 370, 794, 837, 1001
Bme18I GGWCC 4 cut(s) 88, 145, 184, 405
BmeT110I CYCGRG 2 cut(s) 281, 308
BmgT120I GGNCC 9 cut(s) 88, 145, 184, 197, 299, 405, 465, 538, 1052
BmrFI CCNGG 8 cut(s) 38, 50, 170, 322, 370, 794, 837, 1001
BmsI GCATC 4 cut(s) 697, 709, 931, 963
BpiI GAAGAC 2 cut(s) 237, 636
BplI GAGNNNNNCTC 4 cut(s) 209, 241, 332, 364
BpmI CTGGAG 2 cut(s) 780, 1089
Bpu1102I GCTNAGC 1 cut(s) 456
BpuEI CTTGAG 2 cut(s) 731, 758
BpuMI CCSGG 3 cut(s) 38, 322, 837
Bsa29I ATCGAT 1 cut(s) 416
BsaAI YACGTR 1 cut(s) 860
BsaBI GATNNNNATC 1 cut(s) 547
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 8 cut(s) 48, 112, 374, 396, 408, 435, 793, 1000
BsaWI WCCGGW 3 cut(s) 25, 85, 153
Bse118I RCCGGY 2 cut(s) 126, 344
Bse1I ACTGG 2 cut(s) 763, 901
Bse8I GATNNNNATC 1 cut(s) 547
BseAI TCCGGA 2 cut(s) 85, 153
BseBI CCWGG 5 cut(s) 50, 170, 370, 794, 1001
BseCI ATCGAT 1 cut(s) 416
BseDI CCNNGG 8 cut(s) 48, 112, 374, 396, 408, 435, 793, 1000
BseGI GGATG 2 cut(s) 200, 292
BseJI GATNNNNATC 1 cut(s) 547
BseMII CTCAG 6 cut(s) 435, 447, 639, 710, 881, 978
BseNI ACTGG 2 cut(s) 763, 901
BsePI GCGCGC 1 cut(s) 130
BseRI GAGGAG 2 cut(s) 230, 1038
BseX3I CGGCCG 1 cut(s) 39
BseXI GCAGC 8 cut(s) 165, 375, 402, 502, 867, 953, 956, 988
BsgI GTGCAG 2 cut(s) 229, 960
Bsh1236I CGCG 3 cut(s) 114, 132, 705
Bsh1285I CGRYCG 1 cut(s) 42
BshVI ATCGAT 1 cut(s) 416
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 1 cut(s) 222
BsiHKCI CYCGRG 2 cut(s) 281, 308
BsmAI GTCTC 1 cut(s) 49
BsmBI CGTCTC 1 cut(s) 49
BsmI GAATGC 2 cut(s) 319, 804
BsoBI CYCGRG 2 cut(s) 281, 308
Bsp1286I GDGCHC 2 cut(s) 222, 1008
Bsp13I TCCGGA 2 cut(s) 85, 153
Bsp143I GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
Bsp1720I GCTNAGC 1 cut(s) 456
Bsp19I CCATGG 2 cut(s) 396, 435
BspACI CCGC 7 cut(s) 61, 112, 114, 204, 318, 338, 920
BspCNI CTCAG 6 cut(s) 436, 448, 640, 709, 880, 977
BspDI ATCGAT 1 cut(s) 416
BspEI TCCGGA 2 cut(s) 85, 153
BspFNI CGCG 3 cut(s) 114, 132, 705
BspMAI CTGCAG 1 cut(s) 183
BspTI CTTAAG 1 cut(s) 662
BsrFI RCCGGY 2 cut(s) 126, 344
BsrI ACTGG 2 cut(s) 763, 901
BssAI RCCGGY 2 cut(s) 126, 344
BssECI CCNNGG 8 cut(s) 48, 112, 374, 396, 408, 435, 793, 1000
BssHII GCGCGC 1 cut(s) 130
BssMI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
BssNI GRCGYC 1 cut(s) 77
BssT1I CCWWGG 3 cut(s) 396, 408, 435
Bst2UI CCWGG 5 cut(s) 50, 170, 370, 794, 1001
Bst4CI ACNGT 2 cut(s) 849, 888
Bst6I CTCTTC 2 cut(s) 61, 245
BstACI GRCGYC 1 cut(s) 77
BstAFI CTTAAG 1 cut(s) 662
BstBAI YACGTR 1 cut(s) 860
BstC8I GCNNGC 9 cut(s) 132, 208, 336, 346, 453, 483, 678, 915, 961
BstDEI CTNAG 7 cut(s) 426, 444, 456, 648, 696, 867, 964
BstDSI CCRYGG 3 cut(s) 112, 396, 435
BstF5I GGATG 2 cut(s) 200, 292
BstFNI CGCG 3 cut(s) 114, 132, 705
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 3 cut(s) 132, 134, 368
BstKTI GATC 7 cut(s) 10, 31, 159, 175, 275, 293, 475
BstMAI GTCTC 1 cut(s) 49
BstMBI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
BstMCI CGRYCG 1 cut(s) 42
BstMWI GCNNNNNNNGC 4 cut(s) 360, 431, 457, 919
BstNI CCWGG 5 cut(s) 50, 170, 370, 794, 1001
BstNSI RCATGY 1 cut(s) 959
BstSCI CCNGG 8 cut(s) 36, 48, 168, 320, 368, 792, 835, 999
BstSFI CTRYAG 1 cut(s) 179
BstUI CGCG 3 cut(s) 114, 132, 705
BstV1I GCAGC 8 cut(s) 165, 375, 402, 502, 867, 953, 956, 988
BstV2I GAAGAC 2 cut(s) 237, 636
BstX2I RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
BstYI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
BstZI CGGCCG 1 cut(s) 39
Bsu15I ATCGAT 1 cut(s) 416
BsuTUI ATCGAT 1 cut(s) 416
BtgI CCRYGG 3 cut(s) 112, 396, 435
BtgZI GCGATG 1 cut(s) 720
BtsCI GGATG 2 cut(s) 200, 292
BtsIMutI CAGTG 2 cut(s) 722, 777
Cac8I GCNNGC 9 cut(s) 132, 208, 336, 346, 453, 483, 678, 915, 961
CfoI GCGC 3 cut(s) 132, 134, 368
Cfr10I RCCGGY 2 cut(s) 126, 344
Cfr13I GGNCC 9 cut(s) 88, 145, 184, 197, 299, 405, 465, 538, 1052
Cfr42I CCGCGG 1 cut(s) 115
ClaI ATCGAT 1 cut(s) 416
CviAII CATG 4 cut(s) 253, 397, 436, 956
DdeI CTNAG 7 cut(s) 426, 444, 456, 648, 696, 867, 964
DpnI GATC 7 cut(s) 9, 30, 158, 174, 274, 292, 474
DpnII GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
EaeI YGGCCR 2 cut(s) 39, 991
EagI CGGCCG 1 cut(s) 39
Eam1104I CTCTTC 2 cut(s) 61, 245
EarI CTCTTC 2 cut(s) 61, 245
EciI GGCGGA 2 cut(s) 193, 353
Ecl136II GAGCTC 1 cut(s) 220
EclXI CGGCCG 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 396, 408, 435
Eco24I GRGCYC 2 cut(s) 222, 1008
Eco32I GATATC 1 cut(s) 1012
Eco47I GGWCC 4 cut(s) 88, 145, 184, 405
Eco52I CGGCCG 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 1 cut(s) 746
Eco72I CACGTG 1 cut(s) 860
Eco88I CYCGRG 2 cut(s) 281, 308
EcoICRI GAGCTC 1 cut(s) 220
EcoO109I RGGNCCY 3 cut(s) 184, 405, 1052
EcoRII CCWGG 5 cut(s) 48, 168, 368, 792, 999
EcoRV GATATC 1 cut(s) 1012
EcoT14I CCWWGG 3 cut(s) 396, 408, 435
EcoT38I GRGCYC 2 cut(s) 222, 1008
ErhI CCWWGG 3 cut(s) 396, 408, 435
Esp3I CGTCTC 1 cut(s) 49
FaeI CATG 4 cut(s) 256, 400, 439, 959
FatI CATG 4 cut(s) 252, 396, 435, 955
FauI CCCGC 1 cut(s) 68
FokI GGATG 2 cut(s) 187, 299
FriOI GRGCYC 2 cut(s) 222, 1008
FspBI CTAG 2 cut(s) 519, 1037
GlaI GCGC 3 cut(s) 131, 133, 367
GsuI CTGGAG 2 cut(s) 780, 1089
HaeII RGCGCY 1 cut(s) 369
HhaI GCGC 3 cut(s) 132, 134, 368
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 4 cut(s) 256, 400, 439, 959
Hin6I GCGC 3 cut(s) 130, 132, 366
HinP1I GCGC 3 cut(s) 130, 132, 366
HincII GTYRAC 1 cut(s) 327
HindII GTYRAC 1 cut(s) 327
HinfI GANTC 7 cut(s) 53, 413, 667, 782, 863, 983, 996
HphI GGTGA 1 cut(s) 97
Hpy166II GTNNAC 1 cut(s) 327
Hpy188III TCNNGA 5 cut(s) 86, 154, 443, 622, 748
Hpy8I GTNNAC 1 cut(s) 327
Hpy99I CGWCG 6 cut(s) 79, 82, 167, 197, 334, 473
HpyAV CCTTC 5 cut(s) 199, 424, 529, 587, 1043
HpyCH4III ACNGT 2 cut(s) 849, 888
HpyCH4IV ACGT 3 cut(s) 77, 329, 859
HpyF10VI GCNNNNNNNGC 4 cut(s) 360, 431, 457, 919
HpyF3I CTNAG 7 cut(s) 426, 444, 456, 648, 696, 867, 964
HpySE526I ACGT 3 cut(s) 77, 329, 859
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 4 cut(s) 256, 400, 439, 959
HspAI GCGC 3 cut(s) 130, 132, 366
Kpn2I TCCGGA 2 cut(s) 85, 153
KroI GCCGGC 1 cut(s) 344
KroNI GCCGGC 1 cut(s) 346
KspI CCGCGG 1 cut(s) 115
Kzo9I GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
LmnI GCTCC 8 cut(s) 122, 217, 230, 353, 360, 398, 445, 922
Lsp1109I GCAGC 8 cut(s) 165, 375, 402, 502, 867, 953, 956, 988
LweI GCATC 4 cut(s) 697, 709, 931, 963
MaeI CTAG 2 cut(s) 519, 1037
MaeII ACGT 3 cut(s) 77, 329, 859
MaeIII GTNAC 2 cut(s) 699, 855
MalI GATC 7 cut(s) 9, 30, 158, 174, 274, 292, 474
MboI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
MboII GAAGA 5 cut(s) 48, 232, 242, 636, 739
MfeI CAATTG 1 cut(s) 987
MflI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
MhlI GDGCHC 2 cut(s) 222, 1008
MluCI AATT 1 cut(s) 987
MlyI GAGTC 1 cut(s) 47
MroI TCCGGA 2 cut(s) 85, 153
MroNI GCCGGC 1 cut(s) 344
MseI TTAA 1 cut(s) 663
MslI CAYNNNNRTG 1 cut(s) 251
MspA1I CMGCKG 2 cut(s) 114, 880
MspCI CTTAAG 1 cut(s) 662
MspR9I CCNGG 8 cut(s) 38, 50, 170, 322, 370, 794, 837, 1001
MunI CAATTG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 319, 804
MvaI CCWGG 5 cut(s) 50, 170, 370, 794, 1001
MvnI CGCG 3 cut(s) 114, 132, 705
MwoI GCNNNNNNNGC 4 cut(s) 360, 431, 457, 919
NaeI GCCGGC 1 cut(s) 346
NciI CCSGG 3 cut(s) 38, 322, 837
NcoI CCATGG 2 cut(s) 396, 435
NdeII GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
NgoMIV GCCGGC 1 cut(s) 344
NlaIII CATG 4 cut(s) 256, 400, 439, 959
NmeAIII GCCGAG 2 cut(s) 201, 399
NmuCI GTSAC 1 cut(s) 855
NspI RCATGY 1 cut(s) 959
PaeR7I CTCGAG 1 cut(s) 281
PalAI GGCGCGCC 1 cut(s) 130
PauI GCGCGC 1 cut(s) 130
PctI GAATGC 2 cut(s) 319, 804
PdiI GCCGGC 1 cut(s) 346
PfeI GAWTC 6 cut(s) 413, 667, 782, 863, 983, 996
PflFI GACNNNGTC 1 cut(s) 76
PflMI CCANNNNNTGG 1 cut(s) 851
PleI GAGTC 1 cut(s) 47
PmaCI CACGTG 1 cut(s) 860
PmlI CACGTG 1 cut(s) 860
PpsI GAGTC 1 cut(s) 47
Ppu21I YACGTR 1 cut(s) 860
PpuMI RGGWCCY 2 cut(s) 184, 405
Psp124BI GAGCTC 1 cut(s) 222
Psp5II RGGWCCY 2 cut(s) 184, 405
Psp6I CCWGG 5 cut(s) 48, 168, 368, 792, 999
PspCI CACGTG 1 cut(s) 860
PspGI CCWGG 5 cut(s) 48, 168, 368, 792, 999
PspPI GGNCC 9 cut(s) 88, 145, 184, 197, 299, 405, 465, 538, 1052
PspPPI RGGWCCY 2 cut(s) 184, 405
PspXI VCTCGAGB 1 cut(s) 281
PstI CTGCAG 1 cut(s) 183
PsuI RGATCY 6 cut(s) 7, 28, 156, 172, 272, 290
PsyI GACNNNGTC 1 cut(s) 76
PteI GCGCGC 1 cut(s) 130
PvuII CAGCTG 1 cut(s) 880
RseI CAYNNNNRTG 1 cut(s) 251
SacI GAGCTC 1 cut(s) 222
SacII CCGCGG 1 cut(s) 115
SaqAI TTAA 1 cut(s) 663
Sau3AI GATC 7 cut(s) 7, 28, 156, 172, 272, 290, 472
Sau96I GGNCC 9 cut(s) 88, 145, 184, 197, 299, 405, 465, 538, 1052
SchI GAGTC 1 cut(s) 47
ScrFI CCNGG 8 cut(s) 38, 50, 170, 322, 370, 794, 837, 1001
SduI GDGCHC 2 cut(s) 222, 1008
SfaNI GCATC 4 cut(s) 697, 709, 931, 963
SfcI CTRYAG 1 cut(s) 179
Sfr274I CTCGAG 1 cut(s) 281
Sfr303I CCGCGG 1 cut(s) 115
SgrAI CRCCGGYG 1 cut(s) 126
SgrBI CCGCGG 1 cut(s) 115
SgsI GGCGCGCC 1 cut(s) 130
SinI GGWCC 4 cut(s) 88, 145, 184, 405
SlaI CTCGAG 1 cut(s) 281
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 4 cut(s) 281, 662, 737, 746
SmoI CTYRAG 4 cut(s) 281, 662, 737, 746
Sse9I AATT 1 cut(s) 987
SsiI CCGC 7 cut(s) 61, 112, 114, 204, 318, 338, 920
SspMI CTAG 2 cut(s) 519, 1037
SstI GAGCTC 1 cut(s) 222
StyD4I CCNGG 8 cut(s) 36, 48, 168, 320, 368, 792, 835, 999
StyI CCWWGG 3 cut(s) 396, 408, 435
TaaI ACNGT 2 cut(s) 849, 888
TaiI ACGT 3 cut(s) 80, 332, 862
TaqI TCGA 6 cut(s) 192, 213, 282, 416, 471, 1008
TasI AATT 1 cut(s) 987
TauI GCSGC 2 cut(s) 117, 320
TfiI GAWTC 6 cut(s) 413, 667, 782, 863, 983, 996
Tru1I TTAA 1 cut(s) 663
Tru9I TTAA 1 cut(s) 663
TscAI CASTG 2 cut(s) 729, 784
TseFI GTSAC 1 cut(s) 855
TseI GCWGC 8 cut(s) 178, 363, 390, 515, 880, 941, 944, 976
Tsp45I GTSAC 1 cut(s) 855
TspDTI ATGAA 1 cut(s) 881
TspRI CASTG 2 cut(s) 729, 784
Tth111I GACNNNGTC 1 cut(s) 76
Van91I CCANNNNNTGG 1 cut(s) 851
Vha464I CTTAAG 1 cut(s) 662
VpaK11BI GGWCC 4 cut(s) 88, 145, 184, 405
XceI RCATGY 1 cut(s) 959
XcmI CCANNNNNNNNNTGG 1 cut(s) 493
XhoI CTCGAG 1 cut(s) 281
XspI CTAG 2 cut(s) 519, 1037
ZraI GACGTC 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.