pycom01g18010
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
17176051 .. 17178607
2557 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g18010.2

Sequence Viewer

Length: 978 bp
ATGCAAGATCCGGCCAACCCGAAACCGGATCCGAGCTCCAGCTCTCAGGACTCTCAGCGCCCACGCATGGCGCCGCCGTTTCCGGACGCGACTCCGAGCCTTCTGTTCCGGGGCTCCTACCACCGTCGAGCCCAATCGGAGGTCCATTTCCGGATCGATCCCGACGACCTGGATCTGCTCCAGGACCCGTTCGACGGCCCGTCCGGCAGATTCGAGGAGCTGGGGGTCTCCGAGGAAGATATTTTCAGCATCTTCATGGATATGGAGAAGCTCGGATCCAAACTCGACGACGGGCCCTCCGACCTGAAACCCGAGAATGCCGGCGGTTCCCTGCACTCGGAGGGCGGCGGGTTTGGTGGAGAGATGAGCGCGAGGCCGAGGCATCGCCATAGCAACTCCGTGGACGCGTCTTTGGATAGCATAGAGGCTAAGAAGGCCATGGCTCCCGATAAGCTGGCTGAGCTCTGGACCGTCGATCCCAAACGAGCTAAGAGGATTTTGGCAAATCGGCAGTCTGCTGCTCGGTCAAAAGAGAGGAAGGCCCGGTACATATCAGAACTTGAAAGAAAAGTTCAGACACTACAAACAGAAGCTACTACTCTATCAGCACAGCTCACTTTGTTCCAGAGAGACACAACGGGCTTATCTTCTGAGAACACAGAGCTTAAGCTTCGGGTGCAAGCTATGGAACAACAAGCTCAATTACGTGATGCTCTCAATGATGCACTGAAGAAAGAACTTGAGAGGCTCAAGGTTGCAACTGGAGAACAGTTAACACACACTGATTCATACAATCTGGGAATGCACCATTTTCCATATTCGCAGTCCCCCTTGTTTCCCAGTAAGTCACAGCCCGGGTCACGGGATTCCCAGAACATTCACATGCCACAGTTCCATCAATTCCAGCCTAATATGTCAGCTCCCCATCAGCCTATGCTTGGATCGATCCTCTTTTTATACAGTCACATGCCTGCTTAG

Protein Analysis

326

Amino Acids

36.35

Weight (kDa)

6.07

Isoelectric Point (pI)

62.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 70
AccII CGCG 3 cut(s) 89, 371, 407
AccIII TCCGGA 2 cut(s) 82, 150
AciI CCGC 4 cut(s) 74, 324, 345, 348
AcoI YGGCCR 1 cut(s) 12
AcuI CTGAAG 1 cut(s) 749
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 1 cut(s) 548
AfiI CCNNNNNNNGG 7 cut(s) 25, 67, 139, 194, 337, 861, 938
AflII CTTAAG 1 cut(s) 665
AflIII ACRYGT 1 cut(s) 405
AgsI TTSAA 1 cut(s) 563
AhdI GACNNNNNGTC 1 cut(s) 199
AjnI CCWGG 2 cut(s) 168, 180
Alw21I GWGCWC 2 cut(s) 38, 465
Alw26I GTCTC 2 cut(s) 232, 624
Ama87I CYCGRG 2 cut(s) 311, 854
Aor13HI TCCGGA 2 cut(s) 82, 150
AoxI GGCC 6 cut(s) 12, 196, 293, 374, 435, 540
ApaI GGGCCC 1 cut(s) 297
ApeKI GCWGC 1 cut(s) 518
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AspLEI GCGC 3 cut(s) 60, 73, 371
AspS9I GGNCC 7 cut(s) 142, 184, 197, 293, 294, 468, 541
AsuC2I CCSGG 4 cut(s) 110, 544, 855, 856
AvaI CYCGRG 2 cut(s) 311, 854
AvaII GGWCC 3 cut(s) 142, 184, 468
BaeGI GKGCMC 1 cut(s) 297
BamHI GGATCC 2 cut(s) 28, 275
BanI GGYRCC 1 cut(s) 70
BanII GRGCYC 5 cut(s) 38, 116, 133, 297, 465
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
Bbv12I GWGCWC 2 cut(s) 38, 465
BbvI GCAGC 1 cut(s) 505
BccI CCATC 2 cut(s) 903, 933
BceAI ACGGC 2 cut(s) 61, 211
BciT130I CCWGG 2 cut(s) 170, 182
BcnI CCSGG 4 cut(s) 110, 544, 855, 856
BcoDI GTCTC 2 cut(s) 232, 624
BfoI RGCGCY 2 cut(s) 61, 74
BfrI CTTAAG 1 cut(s) 665
BglI GCCNNNNNGGC 1 cut(s) 204
BisI GCNGC 3 cut(s) 74, 346, 519
BlpI GCTNAGC 1 cut(s) 459
BlsI GCNGC 3 cut(s) 75, 347, 520
Bme1390I CCNGG 6 cut(s) 110, 170, 182, 544, 855, 856
Bme18I GGWCC 3 cut(s) 142, 184, 468
BmeRI GACNNNNNGTC 1 cut(s) 199
BmeT110I CYCGRG 2 cut(s) 311, 854
BmgT120I GGNCC 7 cut(s) 142, 184, 197, 293, 294, 468, 541
BmiI GGNNCC 8 cut(s) 30, 72, 115, 186, 277, 295, 328, 444
BmrFI CCNGG 6 cut(s) 110, 170, 182, 544, 855, 856
BmrI ACTGGG 1 cut(s) 834
BmsI GCATC 4 cut(s) 258, 391, 700, 712
BmuI ACTGGG 1 cut(s) 834
BpmI CTGGAG 3 cut(s) 22, 164, 783
Bpu1102I GCTNAGC 1 cut(s) 459
BpuEI CTTGAG 2 cut(s) 734, 761
BpuMI CCSGG 4 cut(s) 110, 544, 855, 856
Bsa29I ATCGAT 2 cut(s) 156, 944
BsaAI YACGTR 1 cut(s) 707
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 232
BsaJI CCNNGG 6 cut(s) 109, 231, 377, 399, 438, 854
BsaWI WCCGGW 3 cut(s) 25, 82, 150
BsaXI ACNNNNNCTCC 2 cut(s) 281, 311
Bsc4I CCNNNNNNNGG 7 cut(s) 25, 67, 139, 194, 337, 861, 938
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 2 cut(s) 766, 840
BseAI TCCGGA 2 cut(s) 82, 150
BseBI CCWGG 2 cut(s) 170, 182
BseCI ATCGAT 2 cut(s) 156, 944
BseDI CCNNGG 6 cut(s) 109, 231, 377, 399, 438, 854
BseLI CCNNNNNNNGG 7 cut(s) 25, 67, 139, 194, 337, 861, 938
BseMII CTCAG 4 cut(s) 59, 68, 450, 642
BseNI ACTGG 2 cut(s) 766, 840
BseRI GAGGAG 1 cut(s) 230
BseSI GKGCMC 1 cut(s) 297
BseXI GCAGC 1 cut(s) 505
BseYI CCCAGC 1 cut(s) 220
BsgI GTGCAG 1 cut(s) 317
Bsh1236I CGCG 3 cut(s) 89, 371, 407
BshFI GGCC 6 cut(s) 14, 198, 295, 376, 437, 542
BshNI GGYRCC 1 cut(s) 70
BshVI ATCGAT 2 cut(s) 156, 944
BsiHKAI GWGCWC 2 cut(s) 38, 465
BsiHKCI CYCGRG 2 cut(s) 311, 854
BsiSI CCGG 9 cut(s) 11, 26, 83, 109, 151, 204, 321, 544, 855
BslFI GGGAC 1 cut(s) 811
BslI CCNNNNNNNGG 7 cut(s) 25, 67, 139, 194, 337, 861, 938
BsmAI GTCTC 2 cut(s) 232, 624
BsmFI GGGAC 1 cut(s) 811
BsmI GAATGC 2 cut(s) 322, 807
BsnI GGCC 6 cut(s) 14, 198, 295, 376, 437, 542
Bso31I GGTCTC 1 cut(s) 232
BsoBI CYCGRG 2 cut(s) 311, 854
Bsp120I GGGCCC 1 cut(s) 293
Bsp1286I GDGCHC 5 cut(s) 38, 116, 133, 297, 465
Bsp13I TCCGGA 2 cut(s) 82, 150
Bsp143I GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
Bsp1720I GCTNAGC 1 cut(s) 459
Bsp19I CCATGG 1 cut(s) 438
BspACI CCGC 4 cut(s) 74, 324, 345, 348
BspANI GGCC 6 cut(s) 14, 198, 295, 376, 437, 542
BspCNI CTCAG 4 cut(s) 58, 67, 451, 643
BspDI ATCGAT 2 cut(s) 156, 944
BspEI TCCGGA 2 cut(s) 82, 150
BspFNI CGCG 3 cut(s) 89, 371, 407
BspLI GGNNCC 8 cut(s) 30, 72, 115, 186, 277, 295, 328, 444
BspT107I GGYRCC 1 cut(s) 70
BspTI CTTAAG 1 cut(s) 665
BspTNI GGTCTC 1 cut(s) 232
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 2 cut(s) 766, 840
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 6 cut(s) 109, 231, 377, 399, 438, 854
BssMI GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 1 cut(s) 438
Bst2UI CCWGG 2 cut(s) 170, 182
Bst4CI ACNGT 5 cut(s) 125, 472, 771, 891, 962
BstACI GRCGYC 1 cut(s) 71
BstAFI CTTAAG 1 cut(s) 665
BstBAI YACGTR 1 cut(s) 707
BstC8I GCNNGC 4 cut(s) 322, 456, 681, 972
BstDEI CTNAG 7 cut(s) 45, 54, 429, 459, 489, 651, 975
BstDSI CCRYGG 2 cut(s) 399, 438
BstFNI CGCG 3 cut(s) 89, 371, 407
BstH2I RGCGCY 2 cut(s) 61, 74
BstHHI GCGC 3 cut(s) 60, 73, 371
BstKTI GATC 9 cut(s) 10, 31, 156, 160, 175, 278, 478, 944, 948
BstMAI GTCTC 2 cut(s) 232, 624
BstMBI GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
BstMWI GCNNNNNNNGC 4 cut(s) 204, 434, 460, 676
BstNI CCWGG 2 cut(s) 170, 182
BstNSI RCATGY 2 cut(s) 886, 970
BstSCI CCNGG 6 cut(s) 108, 168, 180, 542, 853, 854
BstSLI GKGCMC 1 cut(s) 297
BstUI CGCG 3 cut(s) 89, 371, 407
BstV1I GCAGC 1 cut(s) 505
BstX2I RGATCY 4 cut(s) 7, 28, 172, 275
BstYI RGATCY 4 cut(s) 7, 28, 172, 275
Bsu15I ATCGAT 2 cut(s) 156, 944
BsuRI GGCC 6 cut(s) 14, 198, 295, 376, 437, 542
BsuTUI ATCGAT 2 cut(s) 156, 944
BtgI CCRYGG 2 cut(s) 399, 438
BtgZI GCGATG 1 cut(s) 368
BtsIMutI CAGTG 2 cut(s) 725, 780
Cac8I GCNNGC 4 cut(s) 322, 456, 681, 972
CfoI GCGC 3 cut(s) 60, 73, 371
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 7 cut(s) 142, 184, 197, 293, 294, 468, 541
Cfr9I CCCGGG 1 cut(s) 854
ClaI ATCGAT 2 cut(s) 156, 944
CseI GACGC 3 cut(s) 95, 396, 413
Csp6I GTAC 1 cut(s) 547
CviAII CATG 5 cut(s) 67, 256, 439, 883, 967
CviQI GTAC 1 cut(s) 547
DdeI CTNAG 7 cut(s) 45, 54, 429, 459, 489, 651, 975
DinI GGCGCC 1 cut(s) 72
DpnI GATC 9 cut(s) 9, 30, 155, 159, 174, 277, 477, 943, 947
DpnII GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
DriI GACNNNNNGTC 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 12
Eam1105I GACNNNNNGTC 1 cut(s) 199
Ecl136II GAGCTC 2 cut(s) 36, 463
Eco130I CCWWGG 1 cut(s) 438
Eco24I GRGCYC 5 cut(s) 38, 116, 133, 297, 465
Eco31I GGTCTC 1 cut(s) 232
Eco47I GGWCC 3 cut(s) 142, 184, 468
Eco53kI GAGCTC 2 cut(s) 36, 463
Eco57I CTGAAG 1 cut(s) 749
Eco88I CYCGRG 2 cut(s) 311, 854
EcoICRI GAGCTC 2 cut(s) 36, 463
EcoO109I RGGNCCY 2 cut(s) 184, 294
EcoRII CCWGG 2 cut(s) 168, 180
EcoT14I CCWWGG 1 cut(s) 438
EcoT38I GRGCYC 5 cut(s) 38, 116, 133, 297, 465
EgeI GGCGCC 1 cut(s) 72
EheI GGCGCC 1 cut(s) 72
ErhI CCWWGG 1 cut(s) 438
FaeI CATG 5 cut(s) 70, 259, 442, 886, 970
FaqI GGGAC 1 cut(s) 811
FatI CATG 5 cut(s) 66, 255, 438, 882, 966
FauI CCCGC 1 cut(s) 341
Fnu4HI GCNGC 3 cut(s) 74, 346, 519
FriOI GRGCYC 5 cut(s) 38, 116, 133, 297, 465
Fsp4HI GCNGC 3 cut(s) 74, 346, 519
GlaI GCGC 3 cut(s) 59, 72, 370
GluI GCNGC 3 cut(s) 74, 346, 519
GsaI CCCAGC 1 cut(s) 224
GsuI CTGGAG 3 cut(s) 22, 164, 783
HaeII RGCGCY 2 cut(s) 61, 74
HaeIII GGCC 6 cut(s) 14, 198, 295, 376, 437, 542
HapII CCGG 9 cut(s) 11, 26, 83, 109, 151, 204, 321, 544, 855
HgaI GACGC 3 cut(s) 95, 396, 413
HhaI GCGC 3 cut(s) 60, 73, 371
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 5 cut(s) 70, 259, 442, 886, 970
Hin6I GCGC 3 cut(s) 58, 71, 369
HinP1I GCGC 3 cut(s) 58, 71, 369
HincII GTYRAC 1 cut(s) 774
HindII GTYRAC 1 cut(s) 774
HindIII AAGCTT 1 cut(s) 668
HinfI GANTC 5 cut(s) 50, 91, 210, 785, 866
HpaI GTTAAC 1 cut(s) 774
HpaII CCGG 9 cut(s) 11, 26, 83, 109, 151, 204, 321, 544, 855
Hpy166II GTNNAC 2 cut(s) 403, 774
Hpy188III TCNNGA 7 cut(s) 47, 83, 151, 161, 446, 466, 625
Hpy8I GTNNAC 2 cut(s) 403, 774
Hpy99I CGWCG 6 cut(s) 129, 167, 197, 290, 293, 476
HpyAV CCTTC 3 cut(s) 110, 427, 532
HpyCH4III ACNGT 5 cut(s) 125, 472, 771, 891, 962
HpyCH4IV ACGT 1 cut(s) 706
HpyCH4V TGCA 6 cut(s) 4, 334, 679, 725, 758, 805
HpyF10VI GCNNNNNNNGC 4 cut(s) 204, 434, 460, 676
HpyF3I CTNAG 7 cut(s) 45, 54, 429, 459, 489, 651, 975
HpySE526I ACGT 1 cut(s) 706
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 5 cut(s) 70, 259, 442, 886, 970
HspAI GCGC 3 cut(s) 58, 71, 369
KasI GGCGCC 1 cut(s) 70
Kpn2I TCCGGA 2 cut(s) 82, 150
KroI GCCGGC 1 cut(s) 320
KroNI GCCGGC 1 cut(s) 322
KspAI GTTAAC 1 cut(s) 774
Kzo9I GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
LmnI GCTCC 6 cut(s) 41, 119, 183, 217, 448, 925
Lsp1109I GCAGC 1 cut(s) 505
LweI GCATC 4 cut(s) 258, 391, 700, 712
MaeII ACGT 1 cut(s) 706
MaeIII GTNAC 3 cut(s) 846, 858, 962
MalI GATC 9 cut(s) 9, 30, 155, 159, 174, 277, 477, 943, 947
MboI GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
MboII GAAGA 4 cut(s) 244, 248, 639, 742
MflI RGATCY 4 cut(s) 7, 28, 172, 275
MhlI GDGCHC 5 cut(s) 38, 116, 133, 297, 465
MluCI AATT 2 cut(s) 701, 899
MluI ACGCGT 1 cut(s) 405
Mly113I GGCGCC 1 cut(s) 71
MlyI GAGTC 2 cut(s) 44, 85
MmeI TCCRAC 1 cut(s) 324
MroI TCCGGA 2 cut(s) 82, 150
MroNI GCCGGC 1 cut(s) 320
MseI TTAA 2 cut(s) 666, 773
MslI CAYNNNNRTG 3 cut(s) 254, 260, 881
MspCI CTTAAG 1 cut(s) 665
MspI CCGG 9 cut(s) 11, 26, 83, 109, 151, 204, 321, 544, 855
MspR9I CCNGG 6 cut(s) 110, 170, 182, 544, 855, 856
Mva1269I GAATGC 2 cut(s) 322, 807
MvaI CCWGG 2 cut(s) 170, 182
MvnI CGCG 3 cut(s) 89, 371, 407
MwoI GCNNNNNNNGC 4 cut(s) 204, 434, 460, 676
NaeI GCCGGC 1 cut(s) 322
NarI GGCGCC 1 cut(s) 71
NciI CCSGG 4 cut(s) 110, 544, 855, 856
NcoI CCATGG 1 cut(s) 438
NdeII GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
NgoMIV GCCGGC 1 cut(s) 320
NlaIII CATG 5 cut(s) 70, 259, 442, 886, 970
NlaIV GGNNCC 8 cut(s) 30, 72, 115, 186, 277, 295, 328, 444
NmeAIII GCCGAG 1 cut(s) 402
NmuCI GTSAC 3 cut(s) 846, 858, 962
NspI RCATGY 2 cut(s) 886, 970
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 297
PctI GAATGC 2 cut(s) 322, 807
PdiI GCCGGC 1 cut(s) 322
PfeI GAWTC 3 cut(s) 210, 785, 866
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 3 cut(s) 75, 347, 520
PleI GAGTC 2 cut(s) 44, 85
PluTI GGCGCC 1 cut(s) 74
PpsI GAGTC 2 cut(s) 44, 85
Ppu21I YACGTR 1 cut(s) 707
PpuMI RGGWCCY 1 cut(s) 184
Psp124BI GAGCTC 2 cut(s) 38, 465
Psp5II RGGWCCY 1 cut(s) 184
Psp6I CCWGG 2 cut(s) 168, 180
PspFI CCCAGC 1 cut(s) 220
PspGI CCWGG 2 cut(s) 168, 180
PspN4I GGNNCC 8 cut(s) 30, 72, 115, 186, 277, 295, 328, 444
PspOMI GGGCCC 1 cut(s) 293
PspPI GGNCC 7 cut(s) 142, 184, 197, 293, 294, 468, 541
PspPPI RGGWCCY 1 cut(s) 184
PsuI RGATCY 4 cut(s) 7, 28, 172, 275
RsaI GTAC 1 cut(s) 548
RsaNI GTAC 1 cut(s) 547
RseI CAYNNNNRTG 3 cut(s) 254, 260, 881
SacI GAGCTC 2 cut(s) 38, 465
SaqAI TTAA 2 cut(s) 666, 773
SatI GCNGC 3 cut(s) 74, 346, 519
Sau3AI GATC 9 cut(s) 7, 28, 153, 157, 172, 275, 475, 941, 945
Sau96I GGNCC 7 cut(s) 142, 184, 197, 293, 294, 468, 541
SchI GAGTC 2 cut(s) 44, 85
ScrFI CCNGG 6 cut(s) 110, 170, 182, 544, 855, 856
SduI GDGCHC 5 cut(s) 38, 116, 133, 297, 465
SfaNI GCATC 4 cut(s) 258, 391, 700, 712
SfoI GGCGCC 1 cut(s) 72
SinI GGWCC 3 cut(s) 142, 184, 468
SmaI CCCGGG 1 cut(s) 856
SmiMI CAYNNNNRTG 3 cut(s) 254, 260, 881
SmlI CTYRAG 3 cut(s) 665, 740, 749
SmoI CTYRAG 3 cut(s) 665, 740, 749
Sse9I AATT 2 cut(s) 701, 899
SsiI CCGC 4 cut(s) 74, 324, 345, 348
SspDI GGCGCC 1 cut(s) 70
SstI GAGCTC 2 cut(s) 38, 465
StyD4I CCNGG 6 cut(s) 108, 168, 180, 542, 853, 854
StyI CCWWGG 1 cut(s) 438
TaaI ACNGT 5 cut(s) 125, 472, 771, 891, 962
TaiI ACGT 1 cut(s) 709
TaqI TCGA 7 cut(s) 127, 156, 192, 213, 285, 474, 944
TaqII GACCGA 1 cut(s) 513
TasI AATT 2 cut(s) 701, 899
TauI GCSGC 2 cut(s) 76, 348
TfiI GAWTC 3 cut(s) 210, 785, 866
Tru1I TTAA 2 cut(s) 666, 773
Tru9I TTAA 2 cut(s) 666, 773
TscAI CASTG 2 cut(s) 732, 787
TseFI GTSAC 3 cut(s) 846, 858, 962
TseI GCWGC 1 cut(s) 518
Tsp45I GTSAC 3 cut(s) 846, 858, 962
TspDTI ATGAA 2 cut(s) 244, 777
TspGWI ACGGA 1 cut(s) 388
TspMI CCCGGG 1 cut(s) 854
TspRI CASTG 2 cut(s) 732, 787
Vha464I CTTAAG 1 cut(s) 665
VpaK11BI GGWCC 3 cut(s) 142, 184, 468
XceI RCATGY 2 cut(s) 886, 970
XmaI CCCGGG 1 cut(s) 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.