Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0012250

Physical Location & Seq

Genomic Coordinates Forward (+)

20419137 .. 20423725

Gene Structure 4589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g27270.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3063 bp

ATGAAACTTTCCTTTCTTTACTTTCTCCTCTTCTTCTTCTCCCTCTTCTTTCTTCAAGCATCCATAGTCCTCGGTGCTTCAAATTCTTTACCTTCCCAACTCAGTGCCTTGCTATCCCTCAAATCCTCACTCAAAGATCCTCTCTTTACATTCAAAGGCTGGGAGAGCAAGGCGAATACTCAAGGTCCAGTTTGGTGTTCATGGTCTGGAATCAAATGCCACCCCAACACATCCCTAATAGTCTCTCTAGACCTCTCTCACCGCAATCTTTCCGGTCCAATCCCAGCTGAAATCCGCTACTTGTCCGGCTTAATTCACCTCAATTTGAGCAGCAACAGTTTCGCTGGACCTCTCCAACCAGCCATTTTCCAACTTACTCAGCTCAGAATCCTTGATATAAGCCACAATGACTTCAACTTCACTTTCCCGCCTGGGATTTCCAAGCTCAAGTTCTTGAGAGTCTTCAATGCTTACAGCAACAGCTTCACCGGTCCATTACCTCAAGAAATCATCAGACTCAGGTTCCTTGAGAAGCTCAACCTTAGTGGAAGCTACTTCGAAGGTAATATTCCACCAGGGTATGGAAGTATTCCCCAACTCAGGGAGCTTGGCCTGGCCGGAAATACTCTTAATGGCGCCATACCACCTCAACTGGGGCTCTTACCAGAGCTCACTCGCATGGAGATCGGCTACAACGGCTTCACTGGTGGCCTTCCTGTAGAGTTGACATTGCTATCAAACCTCACCTACTTAGACATCTCCAATAACTTGCTCTCCGGGTCACTCCCACCCGAGCTTGGCAACTTAACCATGCTCACCACATTATTCCTCTTCAAAAATCGATTTTCAGGCACTATCCCACCCAGCCTGGGAAACTTACAAGCTCTACAATTACTCGACTTATCAGACAATCAGCTCACGGGTTCCATCCCAGCCGGCATTGCTACACTAAAAGACCTCAACAGGCTGAGCTTAATGAACAACTTCCTAGTCGGCGAAATCCCATCCCAAATCGGAAAGCTTCCCAATTTAGAAACCCTCTTCCTCTGGAACAACTCCCTCACAGGAACCCTCCCCCAAAACCTCGGCACCAATGCCAAGCTCGTCCTCGTCGACCTCTCTTCCAACTCACTCACAGGCCCAATCCCCCCAACTCTCTGCAACGGAAACACACTCGTGAAACTCATCCTCTTCTCCAACCGCTTCTCCAGCCTTCTTCCAAGCGCACTGGCCCATTGCACTTCCTTGGTCCGATTCCGCATACAACACAACGAACTCAACGGATCAATCCCTGAGGGCTTCGGCTCCCTCCCTAACCTAACCTTCTTCGACCTAAGCAACAACTACTTCACCGGCCTCATCCCAACCGACCTCGGCAATGCCGCGAAGCTCGAGTACTTAAACATCTCCAACAATCCTCTTCATTCAGCTCTCCCTCAAAACATCTGGAACGCAACTAGTTTGCAAATCTTCTCCGCCATTTCCAGCCACCTCACCGGAAAAATCCCCGACTTCATCGGCTGCAGGAGCCTCTACAAGATCGAACTACACAGCAATGACCTCAACGGCACCATCCCCTGGGACATTGGCCACTGCGAGAAGCTTCTGAGCTTGAGCCTCAGCCGGAACTCCCTCACCGGAATCATCCCCTGGGAAATCTCAGCTCTGCCTTCCATCACCGACCTCGACCTCTCCTACAACTTCCTCTCCGGCACGATCCCCTCGAATTTCGATAACTGCAGGACGCTGGAGACCTTCAACGTCTCGTTTAACCTCCTCACCGGTCCGATCCCGTCCTCCGGCGTCGTTTTCCGGAATCTCCATCCGACGTCGTTTTCGGGAAACGACGGGTTATGCGGCGTCGTTTTGGCGAAGCCGTGCGCGGAGGCCGCCGGAGCGGTGGAGGTCGGCGGCGGTCACGAGCAGCCGAAGAAGACGGCGGGGGCTATTGTCTGGATCATGGCGGCGGCGTTCGGGATCGGGCTGTTTGTGCTCGTCGCCGGGACGCGTTGCTTCCACGCCCGGTACAGCCGCGGCGGGATGGAGGAGGGCCCACAGGTCGGGCCGTGGAAATTGACCGCCTTTCAGCGTTTGAATTTCACGGCGGAGGATGTGCTGGAGTGTTTGCAGATGAGCGATAAGGTGATTGGGATGGGTGGGACCGGGACGGTGTATAAAGCGGAGATGCCAGGTGGCGAGATCATAGCGGTGAAGAAGCTCTGGGGGAAGCAGAAGGAGAGCATAATCCGACGGCGGAGAGGGGTTTTGGCGGAGGTGGAGGTGTTGGGGAACGTGAGGCATAGGAATATAGTGAGATTGTTAGGGTGCTGCGTCAACAGGGACTGCACCATGCTGCTCTACGAGTACATGCCCAATGGAAACTTGGACGACTTGTTGCATGGCAAGAACAAGGCCCAGAATTTGGGTGCGGATTGGGTCACTAGGTACAAGATTGCTCTCGGTGTGGCCCAAGGGATTTGCTACCTTCACCACGACTGTGATCCGGTGATCGTCCACCGTGATCTCAAGCCGAGTAACATTCTGTTGGACGGCGACATGGAGGCGAGGGTGGCGGACTTCGGGGTGGCTAAGTTGATCCAGAGCGATGAGTCCATGTCTGTGATCGCCGGTTCTTACGGCTATATTGCGCCAGAGTATGCTTACACCCTTCAAGTTGACGAGAAGAGTGACATATACAGCTTCGGGGTTGTGCTGCTGGAGATTTTAAGCGGAAAGAGATCGGTGGAGGCGATTTTCGGGGATGGAAACAGCATTGTGGATTGGGTTCGGACGAAAATCAAGAGCATAGATGGCATCAACGATGTTTTAGACAAGAATGCCGGGGCAGGTTGTACGCCGGTGAGGGAGGAGATGATGCAAATGCTTAGGATCGCATTGCTTTGCACGAGTAGGAATCCGGCGGACCGGCCGTCGATGAGGGATGTGGTGTTGATGCTCATTGAAGCCAAGCCTAAGAGGAAGTTGCTTGCTAGTCATGTTGTTGGTCGTGACCGTAGCGTGAGTTGTGGTGACATTCCGCAAAAGCCAACACTTGATTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010016 GO:0010065 GO:0010067 GO:0010087 GO:0010089 GO:0010154 GO:0010223 GO:0010346 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071944 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1021

Amino Acids

111.29

Weight (kDa)

7.24

Isoelectric Point (pI)

31.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 73	4.2e-06	Leucine rich repeat N-terminal domain
LRR_14	PF23598	243 - 448	1e-10	Leucine-rich repeat region
LRR_8	PF13855	391 - 449	4.5e-07	Leucine rich repeat
LRR_8	PF13855	415 - 474	2.2e-07	Leucine rich repeat
LRR_8	PF13855	509 - 567	4.9e-07	Leucine rich repeat
Pkinase	PF00069	713 - 983	1.5e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	713 - 984	2.1e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0012250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61480
fragaria_vesca	FvH4_7g27270
malus_domestica	MD01G1181700.v1.1 MD07G1251900.v1.1
prunus_persica	Prupe.2G275500_v2.0.a1
pyrus_communis	pycom01g19150 pycom07g22430
rosa_chinensis	RchiOBHm_Chr1g0374101
rosa_laevigata	RLG00000026763
rosa_multiflora	Rmu_co8312173.1_g000001 Rmu_co8440105.1_g000001 Rmu_sc0006924.1_g000013
rosa_roxburghii	Rroxscaffold_4G00283740
rosa_rugosa	Rorug01G0380800
rosa_samantha	Rh1AG391500 Rh1BG355500 Rh1CG368500 Rh1DG386200
rosa_wichuraiana	Rw1G034410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1832
Acc36I	ACCTGC	1 cut(s)	2837
AccB1I	GGYRCC	3 cut(s)	635, 1088, 1568
AccB7I	CCANNNNNTGG	3 cut(s)	581, 1578, 2422
AccBSI	CCGCTC	1 cut(s)	1898
AccI	GTMKAC	1 cut(s)	1113
AccII	CGCG	4 cut(s)	1385, 1883, 2008, 2034
AccIII	TCCGGA	1 cut(s)	1812
AclWI	GGATC	9 cut(s)	131, 1291, 1711, 1783, 1964, 1985, 2495, 2590, 2897
AcoI	YGGCCR	3 cut(s)	615, 1588, 2927
AcsI	RAATTY	4 cut(s)	82, 1726, 2095, 2419
AcyI	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
AfaI	GTAC	5 cut(s)	1397, 2027, 2366, 2447, 2854
AflIII	ACRYGT	1 cut(s)	2006
AgeI	ACCGGT	2 cut(s)	488, 1781
AhdI	GACNNNNNGTC	1 cut(s)	2929
AhlI	ACTAGT	1 cut(s)	1457
AjnI	CCWGG	7 cut(s)	430, 574, 612, 867, 1577, 1649, 2188
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
AleI	CACNNNNGTG	2 cut(s)	1175, 2496
Alw21I	GWGCWC	2 cut(s)	672, 1995
Alw26I	GTCTC	3 cut(s)	247, 1745, 1768
AlwI	GGATC	9 cut(s)	131, 1291, 1711, 1783, 1964, 1985, 2495, 2590, 2897
AlwNI	CAGNNNCTG	1 cut(s)	2343
Ama87I	CYCGRG	2 cut(s)	791, 1391
Aor13HI	TCCGGA	1 cut(s)	1812
ApaI	GGGCCC	1 cut(s)	2054
ApeKI	GCWGC	6 cut(s)	330, 1521, 1924, 2328, 2353, 2713
ApoI	RAATTY	4 cut(s)	82, 1726, 2095, 2419
ArsI	GACNNNNNNTTYG	2 cut(s)	1819, 1851
AsiGI	ACCGGT	2 cut(s)	488, 1781
Asp700I	GAANNNNTTC	1 cut(s)	983
AspLEI	GCGC	4 cut(s)	638, 1226, 1883, 2650
AsuC2I	CCSGG	5 cut(s)	778, 2002, 2023, 2164, 2842
AsuII	TTCGAA	1 cut(s)	558
AvaI	CYCGRG	2 cut(s)	791, 1391
AvaII	GGWCC	8 cut(s)	185, 275, 347, 491, 1249, 1784, 2160, 2923
AxyI	CCTNAGG	1 cut(s)	1293
BaeGI	GKGCMC	1 cut(s)	2054
BalI	TGGCCA	1 cut(s)	1590
BanI	GGYRCC	3 cut(s)	635, 1088, 1568
BanII	GRGCYC	3 cut(s)	660, 672, 2054
BarI	GAAGNNNNNNTAC	2 cut(s)	1379, 1411
BauI	CACGAG	3 cut(s)	1175, 1919, 2905
BbsI	GAAGAC	2 cut(s)	454, 1940
Bbv12I	GWGCWC	2 cut(s)	672, 1995
BbvCI	CCTCAGC	1 cut(s)	1619
BbvI	GCAGC	6 cut(s)	342, 1508, 1936, 2315, 2340, 2700
BccI	CCATC	9 cut(s)	935, 1012, 1580, 1682, 1830, 2035, 2146, 2756, 2804
BcgI	CGANNNNNNTGC	4 cut(s)	322, 356, 667, 701
BciT130I	CCWGG	7 cut(s)	432, 576, 614, 869, 1579, 1651, 2190
BcnI	CCSGG	5 cut(s)	778, 2002, 2023, 2164, 2842
BcoDI	GTCTC	3 cut(s)	247, 1745, 1768
BcuI	ACTAGT	1 cut(s)	1457
BfaI	CTAG	5 cut(s)	248, 989, 1458, 2442, 2991
BfmI	CTRYAG	3 cut(s)	717, 1522, 1738
BfoI	RGCGCY	1 cut(s)	639
BfuAI	ACCTGC	1 cut(s)	2837
BlpI	GCTNAGC	1 cut(s)	968
BmcAI	AGTACT	1 cut(s)	1397
Bme18I	GGWCC	8 cut(s)	185, 275, 347, 491, 1249, 1784, 2160, 2923
BmeRI	GACNNNNNGTC	1 cut(s)	2929
BmeT110I	CYCGRG	2 cut(s)	791, 1391
BmrI	ACTGGG	1 cut(s)	662
BmsI	GCATC	5 cut(s)	68, 2175, 2823, 2865, 2943
BmuI	ACTGGG	1 cut(s)	662
BpiI	GAAGAC	2 cut(s)	454, 1940
BpmI	CTGGAG	4 cut(s)	1192, 1769, 2138, 2738
Bpu10I	CCTNAGC	3 cut(s)	1334, 1619, 2885
Bpu1102I	GCTNAGC	1 cut(s)	968
Bpu14I	TTCGAA	1 cut(s)	558
BpuEI	CTTGAG	7 cut(s)	165, 431, 475, 486, 548, 1633, 2510
BpuMI	CCSGG	5 cut(s)	778, 2002, 2023, 2164, 2842
Bsa29I	ATCGAT	1 cut(s)	841
BsaHI	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
BsaI	GGTCTC	1 cut(s)	1745
BsaWI	WCCGGW	7 cut(s)	272, 488, 1496, 1637, 1781, 1812, 2503
BsaXI	ACNNNNNCTCC	6 cut(s)	758, 788, 1190, 1220, 1691, 1721
Bse118I	RCCGGY	7 cut(s)	488, 935, 1352, 1781, 2627, 2857, 2925
Bse1I	ACTGG	4 cut(s)	188, 657, 709, 1233
Bse21I	CCTNAGG	1 cut(s)	1293
Bse3DI	GCAATG	6 cut(s)	728, 939, 1234, 1384, 1561, 2894
BseAI	TCCGGA	1 cut(s)	1812
BseBI	CCWGG	7 cut(s)	432, 576, 614, 869, 1579, 1651, 2190
BseCI	ATCGAT	1 cut(s)	841
BseMI	GCAATG	6 cut(s)	728, 939, 1234, 1384, 1561, 2894
BseNI	ACTGG	4 cut(s)	188, 657, 709, 1233
BseRI	GAGGAG	4 cut(s)	17, 1766, 2060, 2882
BseSI	GKGCMC	1 cut(s)	2054
BseX3I	CGGCCG	1 cut(s)	2927
BseXI	GCAGC	6 cut(s)	342, 1508, 1936, 2315, 2340, 2700
BseYI	CCCAGC	4 cut(s)	159, 283, 863, 931
BsgI	GTGCAG	1 cut(s)	2329
Bsh1236I	CGCG	4 cut(s)	1385, 1883, 2008, 2034
Bsh1285I	CGRYCG	1 cut(s)	2930
BshNI	GGYRCC	3 cut(s)	635, 1088, 1568
BshTI	ACCGGT	2 cut(s)	488, 1781
BshVI	ATCGAT	1 cut(s)	841
BsiEI	CGRYCG	1 cut(s)	2930
BsiHKAI	GWGCWC	2 cut(s)	672, 1995
BsiHKCI	CYCGRG	2 cut(s)	791, 1391
BslFI	GGGAC	5 cut(s)	1595, 2017, 2173, 2179, 2354
BsmAI	GTCTC	3 cut(s)	247, 1745, 1768
BsmBI	CGTCTC	1 cut(s)	1768
BsmFI	GGGAC	5 cut(s)	1595, 2017, 2173, 2179, 2354
BsmI	GAATGC	1 cut(s)	2842
Bso31I	GGTCTC	1 cut(s)	1745
BsoBI	CYCGRG	2 cut(s)	791, 1391
Bsp119I	TTCGAA	1 cut(s)	558
Bsp120I	GGGCCC	1 cut(s)	2050
Bsp1286I	GDGCHC	4 cut(s)	660, 672, 1995, 2054
Bsp13I	TCCGGA	1 cut(s)	1812
Bsp1720I	GCTNAGC	1 cut(s)	968
BspDI	ATCGAT	1 cut(s)	841
BspEI	TCCGGA	1 cut(s)	1812
BspFNI	CGCG	4 cut(s)	1385, 1883, 2008, 2034
BspMAI	CTGCAG	2 cut(s)	1526, 1742
BspMI	ACCTGC	1 cut(s)	2837
BspPI	GGATC	9 cut(s)	131, 1291, 1711, 1783, 1964, 1985, 2495, 2590, 2897
BspT104I	TTCGAA	1 cut(s)	558
BspT107I	GGYRCC	3 cut(s)	635, 1088, 1568
BspTNI	GGTCTC	1 cut(s)	1745
BsrBI	CCGCTC	1 cut(s)	1898
BsrDI	GCAATG	6 cut(s)	728, 939, 1234, 1384, 1561, 2894
BsrFI	RCCGGY	7 cut(s)	488, 935, 1352, 1781, 2627, 2857, 2925
BsrI	ACTGG	4 cut(s)	188, 657, 709, 1233
BssAI	RCCGGY	7 cut(s)	488, 935, 1352, 1781, 2627, 2857, 2925
BssNI	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
BssSI	CACGAG	3 cut(s)	1175, 1919, 2905
BssT1I	CCWWGG	2 cut(s)	1245, 2470
Bst2BI	CACGAG	3 cut(s)	1175, 1919, 2905
Bst2UI	CCWGG	7 cut(s)	432, 576, 614, 869, 1579, 1651, 2190
Bst4CI	ACNGT	5 cut(s)	338, 2170, 2498, 2519, 3014
Bst6I	CTCTTC	8 cut(s)	35, 50, 836, 1046, 1126, 1196, 1425, 2678
BstACI	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
BstBI	TTCGAA	1 cut(s)	558
BstC8I	GCNNGC	2 cut(s)	937, 2988
BstDSI	CCRYGG	2 cut(s)	2032, 2066
BstFNI	CGCG	4 cut(s)	1385, 1883, 2008, 2034
BstH2I	RGCGCY	1 cut(s)	639
BstHHI	GCGC	4 cut(s)	638, 1226, 1883, 2650
BstMAI	GTCTC	3 cut(s)	247, 1745, 1768
BstMCI	CGRYCG	1 cut(s)	2930
BstNI	CCWGG	7 cut(s)	432, 576, 614, 869, 1579, 1651, 2190
BstNSI	RCATGY	1 cut(s)	2371
BstSFI	CTRYAG	3 cut(s)	717, 1522, 1738
BstSLI	GKGCMC	1 cut(s)	2054
BstUI	CGCG	4 cut(s)	1385, 1883, 2008, 2034
BstV1I	GCAGC	6 cut(s)	342, 1508, 1936, 2315, 2340, 2700
BstV2I	GAAGAC	2 cut(s)	454, 1940
BstX2I	RGATCY	1 cut(s)	136
BstYI	RGATCY	1 cut(s)	136
BstZI	CGGCCG	1 cut(s)	2927
Bsu15I	ATCGAT	1 cut(s)	841
Bsu36I	CCTNAGG	1 cut(s)	1293
BsuTUI	ATCGAT	1 cut(s)	841
BtgI	CCRYGG	2 cut(s)	2032, 2066
BtgZI	GCGATG	1 cut(s)	2619
BtsI	GCAGTG	1 cut(s)	1591
BtsIMutI	CAGTG	4 cut(s)	109, 702, 1226, 1591
BveI	ACCTGC	1 cut(s)	2837
Cac8I	GCNNGC	2 cut(s)	937, 2988
CaiI	CAGNNNCTG	1 cut(s)	2343
CfoI	GCGC	4 cut(s)	638, 1226, 1883, 2650
Cfr10I	RCCGGY	7 cut(s)	488, 935, 1352, 1781, 2627, 2857, 2925
Cfr42I	CCGCGG	1 cut(s)	2035
ClaI	ATCGAT	1 cut(s)	841
CpoI	CGGWCCG	2 cut(s)	1784, 2923
CseI	GACGC	5 cut(s)	1753, 1792, 1849, 2014, 2320
Csp6I	GTAC	5 cut(s)	1396, 2026, 2365, 2446, 2853
CspAI	ACCGGT	2 cut(s)	488, 1781
CspCI	CAANNNNNGTGG	2 cut(s)	526, 561
CspI	CGGWCCG	2 cut(s)	1784, 2923
CviQI	GTAC	5 cut(s)	1396, 2026, 2365, 2446, 2853
DinI	GGCGCC	1 cut(s)	637
DriI	GACNNNNNGTC	1 cut(s)	2929
EaeI	YGGCCR	3 cut(s)	615, 1588, 2927
EagI	CGGCCG	1 cut(s)	2927
Eam1104I	CTCTTC	8 cut(s)	35, 50, 836, 1046, 1126, 1196, 1425, 2678
Eam1105I	GACNNNNNGTC	1 cut(s)	2929
EarI	CTCTTC	8 cut(s)	35, 50, 836, 1046, 1126, 1196, 1425, 2678
EciI	GGCGGA	6 cut(s)	1465, 2120, 2269, 2285, 2588, 2936
Ecl136II	GAGCTC	1 cut(s)	670
EclXI	CGGCCG	1 cut(s)	2927
Eco130I	CCWWGG	2 cut(s)	1245, 2470
Eco24I	GRGCYC	3 cut(s)	660, 672, 2054
Eco31I	GGTCTC	1 cut(s)	1745
Eco47I	GGWCC	8 cut(s)	185, 275, 347, 491, 1249, 1784, 2160, 2923
Eco52I	CGGCCG	1 cut(s)	2927
Eco53kI	GAGCTC	1 cut(s)	670
Eco81I	CCTNAGG	1 cut(s)	1293
Eco88I	CYCGRG	2 cut(s)	791, 1391
EcoICRI	GAGCTC	1 cut(s)	670
EcoO109I	RGGNCCY	1 cut(s)	2050
EcoRII	CCWGG	7 cut(s)	430, 574, 612, 867, 1577, 1649, 2188
EcoT14I	CCWWGG	2 cut(s)	1245, 2470
EcoT38I	GRGCYC	3 cut(s)	660, 672, 2054
EgeI	GGCGCC	1 cut(s)	637
EheI	GGCGCC	1 cut(s)	637
ErhI	CCWWGG	2 cut(s)	1245, 2470
Esp3I	CGTCTC	1 cut(s)	1768
FaqI	GGGAC	5 cut(s)	1595, 2017, 2173, 2179, 2354
FauI	CCCGC	3 cut(s)	435, 1933, 2030
FblI	GTMKAC	1 cut(s)	1113
FriOI	GRGCYC	3 cut(s)	660, 672, 2054
FspBI	CTAG	5 cut(s)	248, 989, 1458, 2442, 2991
GlaI	GCGC	4 cut(s)	637, 1225, 1882, 2649
GsaI	CCCAGC	4 cut(s)	163, 287, 867, 935
GsuI	CTGGAG	4 cut(s)	1192, 1769, 2138, 2738
HaeII	RGCGCY	1 cut(s)	639
HgaI	GACGC	5 cut(s)	1753, 1792, 1849, 2014, 2320
HhaI	GCGC	4 cut(s)	638, 1226, 1883, 2650
Hin1I	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
Hin6I	GCGC	4 cut(s)	636, 1224, 1881, 2648
HinP1I	GCGC	4 cut(s)	636, 1224, 1881, 2648
HincII	GTYRAC	4 cut(s)	726, 1114, 2335, 2677
HindII	GTYRAC	4 cut(s)	726, 1114, 2335, 2677
HindIII	AAGCTT	2 cut(s)	1019, 1601
HinfI	GANTC	9 cut(s)	210, 387, 459, 516, 1254, 1641, 1816, 2609, 2914
Hpy166II	GTNNAC	5 cut(s)	726, 1114, 2335, 2515, 2677
Hpy8I	GTNNAC	5 cut(s)	726, 1114, 2335, 2515, 2677
Hpy99I	CGWCG	9 cut(s)	1115, 1808, 1831, 1834, 1850, 1865, 2000, 2253, 2935
HpyCH4III	ACNGT	5 cut(s)	338, 2170, 2498, 2519, 3014
HpyCH4IV	ACGT	3 cut(s)	1761, 1829, 2292
HpySE526I	ACGT	3 cut(s)	1761, 1829, 2292
Hsp92I	GRCGYC	4 cut(s)	636, 1803, 1829, 1860
HspAI	GCGC	4 cut(s)	636, 1224, 1881, 2648
KasI	GGCGCC	1 cut(s)	635
Kpn2I	TCCGGA	1 cut(s)	1812
KroI	GCCGGC	1 cut(s)	935
KroNI	GCCGGC	1 cut(s)	937
KspI	CCGCGG	1 cut(s)	2035
LmnI	GCTCC	4 cut(s)	604, 1310, 1527, 1895
Lsp1109I	GCAGC	6 cut(s)	342, 1508, 1936, 2315, 2340, 2700
LweI	GCATC	5 cut(s)	68, 2175, 2823, 2865, 2943
MaeI	CTAG	5 cut(s)	248, 989, 1458, 2442, 2991
MaeII	ACGT	3 cut(s)	1761, 1829, 2292
MaeIII	GTNAC	7 cut(s)	780, 1916, 2437, 2534, 2687, 3008, 3029
MbiI	CCGCTC	1 cut(s)	1898
MflI	RGATCY	1 cut(s)	136
MhlI	GDGCHC	4 cut(s)	660, 672, 1995, 2054
MlsI	TGGCCA	1 cut(s)	1590
MluCI	AATT	9 cut(s)	82, 312, 322, 890, 1027, 1726, 2072, 2095, 2419
MluI	ACGCGT	1 cut(s)	2006
MluNI	TGGCCA	1 cut(s)	1590
Mly113I	GGCGCC	1 cut(s)	636
MlyI	GAGTC	3 cut(s)	468, 510, 2618
MmeI	TCCRAC	8 cut(s)	379, 394, 1149, 1221, 1434, 1850, 2272, 2526
Mox20I	TGGCCA	1 cut(s)	1590
MroI	TCCGGA	1 cut(s)	1812
MroNI	GCCGGC	1 cut(s)	935
MroXI	GAANNNNTTC	1 cut(s)	983
MscI	TGGCCA	1 cut(s)	1590
MseI	TTAA	8 cut(s)	311, 630, 806, 974, 1400, 1770, 2726, 3061
MslI	CAYNNNNRTG	6 cut(s)	677, 1175, 1554, 2207, 2496, 2618
Msp20I	TGGCCA	1 cut(s)	1590
MspA1I	CMGCKG	2 cut(s)	287, 2034
Mva1269I	GAATGC	1 cut(s)	2842
MvaI	CCWGG	7 cut(s)	432, 576, 614, 869, 1579, 1651, 2190
MvnI	CGCG	4 cut(s)	1385, 1883, 2008, 2034
NaeI	GCCGGC	1 cut(s)	937
NarI	GGCGCC	1 cut(s)	636
NciI	CCSGG	5 cut(s)	778, 2002, 2023, 2164, 2842
NgoMIV	GCCGGC	1 cut(s)	935
NmeAIII	GCCGAG	3 cut(s)	1065, 1353, 2556
NmuCI	GTSAC	6 cut(s)	780, 1916, 2437, 2687, 3008, 3029
NspI	RCATGY	1 cut(s)	2371
NspV	TTCGAA	1 cut(s)	558
OliI	CACNNNNGTG	2 cut(s)	1175, 2496
PaeR7I	CTCGAG	1 cut(s)	1391
PasI	CCCWGGG	2 cut(s)	1578, 1650
PcsI	WCGNNNNNNNCGW	3 cut(s)	1110, 1721, 2747
PctI	GAATGC	1 cut(s)	2842
PdiI	GCCGGC	1 cut(s)	937
PdmI	GAANNNNTTC	1 cut(s)	983
PfeI	GAWTC	6 cut(s)	210, 387, 1254, 1641, 1816, 2914
PflMI	CCANNNNNTGG	3 cut(s)	581, 1578, 2422
PinAI	ACCGGT	2 cut(s)	488, 1781
PleI	GAGTC	3 cut(s)	467, 510, 2617
PluTI	GGCGCC	1 cut(s)	639
PpsI	GAGTC	3 cut(s)	467, 510, 2617
Psp124BI	GAGCTC	1 cut(s)	672
Psp6I	CCWGG	7 cut(s)	430, 574, 612, 867, 1577, 1649, 2188
PspFI	CCCAGC	4 cut(s)	159, 283, 863, 931
PspGI	CCWGG	7 cut(s)	430, 574, 612, 867, 1577, 1649, 2188
PspOMI	GGGCCC	1 cut(s)	2050
PspXI	VCTCGAGB	1 cut(s)	1391
PstI	CTGCAG	2 cut(s)	1526, 1742
PstNI	CAGNNNCTG	1 cut(s)	2343
PsuI	RGATCY	1 cut(s)	136
PvuII	CAGCTG	1 cut(s)	287
RsaI	GTAC	5 cut(s)	1397, 2027, 2366, 2447, 2854
RsaNI	GTAC	5 cut(s)	1396, 2026, 2365, 2446, 2853
RseI	CAYNNNNRTG	6 cut(s)	677, 1175, 1554, 2207, 2496, 2618
Rsr2I	CGGWCCG	2 cut(s)	1784, 2923
RsrII	CGGWCCG	2 cut(s)	1784, 2923
SacI	GAGCTC	1 cut(s)	672
SacII	CCGCGG	1 cut(s)	2035
SalI	GTCGAC	1 cut(s)	1112
SaqAI	TTAA	8 cut(s)	311, 630, 806, 974, 1400, 1770, 2726, 3061
ScaI	AGTACT	1 cut(s)	1397
SchI	GAGTC	3 cut(s)	468, 510, 2618
SduI	GDGCHC	4 cut(s)	660, 672, 1995, 2054
SfaNI	GCATC	5 cut(s)	68, 2175, 2823, 2865, 2943
SfcI	CTRYAG	3 cut(s)	717, 1522, 1738
SfoI	GGCGCC	1 cut(s)	637
Sfr274I	CTCGAG	1 cut(s)	1391
Sfr303I	CCGCGG	1 cut(s)	2035
SfuI	TTCGAA	1 cut(s)	558
SgrAI	CRCCGGYG	1 cut(s)	2857
SgrBI	CCGCGG	1 cut(s)	2035
SinI	GGWCC	8 cut(s)	185, 275, 347, 491, 1249, 1784, 2160, 2923
SlaI	CTCGAG	1 cut(s)	1391
SmiMI	CAYNNNNRTG	6 cut(s)	677, 1175, 1554, 2207, 2496, 2618
SmlI	CTYRAG	8 cut(s)	180, 446, 454, 501, 527, 1391, 1612, 2525
SmoI	CTYRAG	8 cut(s)	180, 446, 454, 501, 527, 1391, 1612, 2525
SpeI	ACTAGT	1 cut(s)	1457
Sse9I	AATT	9 cut(s)	82, 312, 322, 890, 1027, 1726, 2072, 2095, 2419
SspDI	GGCGCC	1 cut(s)	635
SspI	AATATT	1 cut(s)	568
SspMI	CTAG	5 cut(s)	248, 989, 1458, 2442, 2991
SstI	GAGCTC	1 cut(s)	672
StyI	CCWWGG	2 cut(s)	1245, 2470
TaaI	ACNGT	5 cut(s)	338, 2170, 2498, 2519, 3014
TaiI	ACGT	3 cut(s)	1764, 1832, 2295
TasI	AATT	9 cut(s)	82, 312, 322, 890, 1027, 1726, 2072, 2095, 2419
TatI	WGTACW	2 cut(s)	1395, 2364
TauI	GCSGC	8 cut(s)	1385, 1860, 1892, 1914, 1967, 1970, 2034, 2037
TfiI	GAWTC	6 cut(s)	210, 387, 1254, 1641, 1816, 2914
Tru1I	TTAA	8 cut(s)	311, 630, 806, 974, 1400, 1770, 2726, 3061
Tru9I	TTAA	8 cut(s)	311, 630, 806, 974, 1400, 1770, 2726, 3061
TscAI	CASTG	4 cut(s)	109, 709, 1233, 1598
TseFI	GTSAC	6 cut(s)	780, 1916, 2437, 2687, 3008, 3029
TseI	GCWGC	6 cut(s)	330, 1521, 1924, 2328, 2353, 2713
Tsp45I	GTSAC	6 cut(s)	780, 1916, 2437, 2687, 3008, 3029
TspDTI	ATGAA	5 cut(s)	17, 189, 992, 1412, 1504
TspGWI	ACGGA	2 cut(s)	1179, 1296
TspRI	CASTG	4 cut(s)	109, 709, 1233, 1598
Van91I	CCANNNNNTGG	3 cut(s)	581, 1578, 2422
VpaK11BI	GGWCC	8 cut(s)	185, 275, 347, 491, 1249, 1784, 2160, 2923
XapI	RAATTY	4 cut(s)	82, 1726, 2095, 2419
XbaI	TCTAGA	1 cut(s)	247
XceI	RCATGY	1 cut(s)	2371
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2380
XhoI	CTCGAG	1 cut(s)	1391
XmiI	GTMKAC	1 cut(s)	1113
XmnI	GAANNNNTTC	1 cut(s)	983
XspI	CTAG	5 cut(s)	248, 989, 1458, 2442, 2991
ZraI	GACGTC	1 cut(s)	1830
ZrmI	AGTACT	1 cut(s)	1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.