FvH4_7g32910
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
23562592 .. 23564842
2251 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g32910.t2

Sequence Viewer

Length: 1527 bp
ATGGTCTCAGCCTACGCTCTCTTCACACACCCTTTCCCCACTCCTTCTTTCTTTGATTCTCCATTTCCATACCCACTTCCTCCCACCGCTCATATCTCACACTCTTTACTCTCAACCTTCCATAACCATCAATGGTCTTCTCTGCCAACACTCGCTAAAACCCCAAGACCCGACCCAAACCCGTTACTAACCCAACTGGGTTTCCGACCCAATCTCCAATGCAGTTCCAGTCCAATCACGGCCGATATAGGGACAGTGTTCTCGCTGTTGCAAGCGGTTGGAATCGATGACAAAGAAGCAAAAGTTCTGTTAAACAAGAACCCGGTTCTGTCTTTTACGTCTTTGGATTGTTTACGAGCTCGGATTGAGTGCTTTAATTCAGTTGGACTAGATGGGCTTGTGCTTTCCAATTTGATCACCAAATGTCCGAACTTGTTAACTGCTGAGGAGATTGGTCCCTTTTTGAGTTTTGTCCGTCATGATTTGGCAGGCAAGATTGAGCCAGGGCAGCTGAGGAAGCTTTTCCGGGCAGCAGACGTTAGATTCTTGGTGGGATTTGATGAGAAAGTAGGATTGCTTCTTCGTCGCGGTGTTTCGGATGAGAAGATTGTGGATGTTCTCAACAAGGTGAATCTGTACAAGGCATTGTGTCTTAAGTCAGTTGAGGATATTGATACGACTATTACGTTTTTGAACCGTTTTGGTGGGATTGATTTGATTGTGAGGCGTCCTTCGCTACTGAATTATGACTTGGAGACTCAGCTGGCTCCGAGAGTTGAGTTTCTCACTGAGGTTAGTGGTGGAGATGAAAATGCCACCGGGGTATTGTTGGGTAAGCTCCCTGCGATTTTGAGCTACACTGTGGATCATACTAAAGGGCATGTTGAGTTGTTGAGGTCTTTTGCTGGTTTAAGTGATGAACAGATATTCAAAATCTTGCTTGTTTTCCCCAATGTGGTTAGTGCCAGCAGGGAGAGGAAAATGCGTCCGAGAATTAAGTTTCTGAAGGAATGTGGGTTGAGTTCGAATGATATCTACAAGTTCTTGATCAAAGCTCCATTGTTTCTAGGCTTGTCGTTTGAAGACAACCTTGCATATAAGCTTGTGTTTTTGGTGAAGATTGGGTATAGGTATAGAACAAGGGACATGGCAGCAGCAATAGGATCTGCCACCAGAACAAGCTCTGATAACTTGCAAAGAGTGATCGAGCTGTTCTTGAGTTATGGTTTTTCGTGTGCCGACATTGTTGTCATGAGCAGGAGGCATCCTCAGATACTGCAGTACAGTCATGGTGCTTTGGAGAAGAAGATGGAGTACTTGATAAATGAAATGGGTCGTGAAATCGGAGAGTTATTAGCCTTCCCTGCATTCCTTGGATACAAACTTGATGACAGAATTAAAGCCAGGTATGAAGTGAAGAGGAAAATTTTGGGGGAAGGAATGTCACTGAATAAGCTCTTAACTGTTTCATCCGAGAGTTTTACACCGAAAACGCCAGCTTATGTAATTGATCTGAACGTGGAATGA

Protein Analysis

509

Amino Acids

56.82

Weight (kDa)

8.76

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 86 - 371 9.3e-22 mTERF
mTERF PF02536 390 - 492 8.2e-21 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014181)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1247
AccBSI CCGCTC 1 cut(s) 89
AccII CGCG 1 cut(s) 588
AciI CCGC 3 cut(s) 87, 275, 588
AclWI GGATC 2 cut(s) 873, 1171
AcoI YGGCCR 1 cut(s) 240
AcsI RAATTY 1 cut(s) 1425
AcuI CTGAAG 1 cut(s) 1025
AcyI GRCGYC 1 cut(s) 727
AfaI GTAC 3 cut(s) 638, 1283, 1316
AfiI CCNNNNNNNGG 2 cut(s) 249, 955
AflII CTTAAG 1 cut(s) 653
AgsI TTSAA 3 cut(s) 694, 931, 1082
AjnI CCWGG 2 cut(s) 502, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 734, 766
Alw21I GWGCWC 1 cut(s) 361
Alw26I GTCTC 2 cut(s) 10, 749
AlwI GGATC 2 cut(s) 873, 1171
AlwNI CAGNNNCTG 1 cut(s) 1276
AoxI GGCC 1 cut(s) 240
ApeKI GCWGC 4 cut(s) 508, 530, 1151, 1154
ApoI RAATTY 1 cut(s) 1425
Asp700I GAANNNNTTC 1 cut(s) 521
AspS9I GGNCC 1 cut(s) 455
AsuC2I CCSGG 3 cut(s) 323, 527, 820
AsuHPI GGTGA 3 cut(s) 409, 640, 1126
AsuII TTCGAA 1 cut(s) 1025
AvaII GGWCC 1 cut(s) 455
BaeI ACNNNNGTAYC 2 cut(s) 1265, 1298
BanII GRGCYC 1 cut(s) 361
BarI GAAGNNNNNNTAC 4 cut(s) 561, 593, 1298, 1330
BbsI GAAGAC 2 cut(s) 129, 1089
Bbv12I GWGCWC 1 cut(s) 361
BbvCI CCTCAGC 2 cut(s) 444, 512
BbvI GCAGC 4 cut(s) 520, 542, 1163, 1166
BccI CCATC 3 cut(s) 135, 386, 1303
BceAI ACGGC 1 cut(s) 255
BciT130I CCWGG 2 cut(s) 504, 1405
BciVI GTATCC 1 cut(s) 1370
BclI TGATCA 2 cut(s) 414, 1047
BcnI CCSGG 3 cut(s) 323, 527, 820
BcoDI GTCTC 2 cut(s) 10, 749
BfaI CTAG 2 cut(s) 389, 1067
BfmI CTRYAG 1 cut(s) 1277
BfrI CTTAAG 1 cut(s) 653
BfuI GTATCC 1 cut(s) 1370
BisI GCNGC 4 cut(s) 509, 531, 1152, 1155
BlsI GCNGC 4 cut(s) 510, 532, 1153, 1156
BmcAI AGTACT 1 cut(s) 1316
Bme1390I CCNGG 5 cut(s) 323, 504, 527, 820, 1405
Bme18I GGWCC 1 cut(s) 455
BmgT120I GGNCC 1 cut(s) 455
BmiI GGNNCC 2 cut(s) 457, 768
BmrFI CCNGG 5 cut(s) 323, 504, 527, 820, 1405
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 1 cut(s) 1273
BmuI ACTGGG 1 cut(s) 206
BpiI GAAGAC 2 cut(s) 129, 1089
BplI GAGNNNNNCTC 2 cut(s) 1252, 1284
Bpu10I CCTNAGC 2 cut(s) 444, 512
Bpu14I TTCGAA 1 cut(s) 1025
BpuEI CTTGAG 1 cut(s) 1237
BpuMI CCSGG 3 cut(s) 323, 527, 820
Bsa29I ATCGAT 1 cut(s) 285
BsaHI GRCGYC 1 cut(s) 727
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 3 cut(s) 503, 819, 1372
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 955
Bse1I ACTGG 2 cut(s) 201, 228
BseBI CCWGG 2 cut(s) 504, 1405
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 3 cut(s) 503, 819, 1372
BseGI GGATG 4 cut(s) 604, 619, 1264, 1469
BseLI CCNNNNNNNGG 2 cut(s) 249, 955
BseMII CTCAG 6 cut(s) 21, 435, 503, 773, 780, 1283
BseNI ACTGG 2 cut(s) 201, 228
BseRI GAGGAG 1 cut(s) 461
BseX3I CGGCCG 1 cut(s) 240
BseXI GCAGC 4 cut(s) 520, 542, 1163, 1166
Bsh1236I CGCG 1 cut(s) 588
Bsh1285I CGRYCG 1 cut(s) 243
BshFI GGCC 1 cut(s) 242
BshVI ATCGAT 1 cut(s) 285
BsiEI CGRYCG 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 361
BsiSI CCGG 3 cut(s) 323, 526, 819
BslFI GGGAC 3 cut(s) 265, 441, 1157
BslI CCNNNNNNNGG 2 cut(s) 249, 955
BsmAI GTCTC 2 cut(s) 10, 749
BsmFI GGGAC 3 cut(s) 265, 441, 1157
BsmI GAATGC 1 cut(s) 1367
BsnI GGCC 1 cut(s) 242
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 1025
Bsp1286I GDGCHC 1 cut(s) 361
Bsp1407I TGTACA 1 cut(s) 636
Bsp143I GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
BspACI CCGC 3 cut(s) 87, 275, 588
BspANI GGCC 1 cut(s) 242
BspCNI CTCAG 6 cut(s) 20, 436, 504, 772, 781, 1282
BspDI ATCGAT 1 cut(s) 285
BspFNI CGCG 1 cut(s) 588
BspHI TCATGA 2 cut(s) 478, 1251
BspLI GGNNCC 2 cut(s) 457, 768
BspMAI CTGCAG 1 cut(s) 1281
BspPI GGATC 2 cut(s) 873, 1171
BspT104I TTCGAA 1 cut(s) 1025
BspTI CTTAAG 1 cut(s) 653
BspTNI GGTCTC 1 cut(s) 10
BsrBI CCGCTC 1 cut(s) 89
BsrGI TGTACA 1 cut(s) 636
BsrI ACTGG 2 cut(s) 201, 228
BssECI CCNNGG 3 cut(s) 503, 819, 1372
BssMI GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
BssNI GRCGYC 1 cut(s) 727
BssT1I CCWWGG 1 cut(s) 1372
Bst2UI CCWGG 2 cut(s) 504, 1405
Bst4CI ACNGT 5 cut(s) 256, 698, 862, 1286, 1465
Bst6I CTCTTC 2 cut(s) 26, 1412
BstACI GRCGYC 1 cut(s) 727
BstAFI CTTAAG 1 cut(s) 653
BstAUI TGTACA 1 cut(s) 636
BstBI TTCGAA 1 cut(s) 1025
BstC8I GCNNGC 5 cut(s) 273, 490, 765, 967, 1497
BstDEI CTNAG 6 cut(s) 7, 444, 512, 759, 789, 1269
BstF5I GGATG 4 cut(s) 604, 619, 1264, 1469
BstFNI CGCG 1 cut(s) 588
BstKTI GATC 6 cut(s) 417, 868, 1050, 1166, 1206, 1513
BstMAI GTCTC 2 cut(s) 10, 749
BstMBI GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
BstMCI CGRYCG 1 cut(s) 243
BstMWI GCNNNNNNNGC 4 cut(s) 508, 517, 733, 1364
BstNI CCWGG 2 cut(s) 504, 1405
BstNSI RCATGY 1 cut(s) 884
BstSCI CCNGG 5 cut(s) 321, 502, 525, 818, 1403
BstSFI CTRYAG 1 cut(s) 1277
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 4 cut(s) 520, 542, 1163, 1166
BstV2I GAAGAC 2 cut(s) 129, 1089
BstX2I RGATCY 1 cut(s) 1163
BstYI RGATCY 1 cut(s) 1163
BstZI CGGCCG 1 cut(s) 240
Bsu15I ATCGAT 1 cut(s) 285
BsuI GTATCC 1 cut(s) 1370
BsuRI GGCC 1 cut(s) 242
BsuTUI ATCGAT 1 cut(s) 285
BtsCI GGATG 4 cut(s) 604, 619, 1264, 1469
BtsIMutI CAGTG 4 cut(s) 261, 786, 858, 1445
Cac8I GCNNGC 5 cut(s) 273, 490, 765, 967, 1497
CaiI CAGNNNCTG 1 cut(s) 1276
CciI TCATGA 2 cut(s) 478, 1251
Cfr13I GGNCC 1 cut(s) 455
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 2 cut(s) 716, 974
Csp6I GTAC 3 cut(s) 637, 1282, 1315
CviAII CATG 5 cut(s) 479, 881, 1147, 1252, 1289
CviQI GTAC 3 cut(s) 637, 1282, 1315
DdeI CTNAG 6 cut(s) 7, 444, 512, 759, 789, 1269
DpnI GATC 6 cut(s) 416, 867, 1049, 1165, 1205, 1512
DpnII GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
DrdI GACNNNNNNGTC 1 cut(s) 1247
DseDI GACNNNNNNGTC 1 cut(s) 1247
EaeI YGGCCR 1 cut(s) 240
EagI CGGCCG 1 cut(s) 240
Eam1104I CTCTTC 2 cut(s) 26, 1412
EarI CTCTTC 2 cut(s) 26, 1412
Ecl136II GAGCTC 1 cut(s) 359
EclXI CGGCCG 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 1372
Eco24I GRGCYC 1 cut(s) 361
Eco31I GGTCTC 1 cut(s) 10
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 1 cut(s) 455
Eco52I CGGCCG 1 cut(s) 240
Eco53kI GAGCTC 1 cut(s) 359
Eco57I CTGAAG 1 cut(s) 1025
EcoICRI GAGCTC 1 cut(s) 359
EcoRII CCWGG 2 cut(s) 502, 1403
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 1 cut(s) 1372
EcoT38I GRGCYC 1 cut(s) 361
ErhI CCWWGG 1 cut(s) 1372
FaeI CATG 5 cut(s) 482, 884, 1150, 1255, 1292
FalI AAGNNNNNCTT 2 cut(s) 1074, 1106
FaqI GGGAC 3 cut(s) 265, 441, 1157
FatI CATG 5 cut(s) 478, 880, 1146, 1251, 1288
FbaI TGATCA 2 cut(s) 414, 1047
Fnu4HI GCNGC 4 cut(s) 509, 531, 1152, 1155
FokI GGATG 4 cut(s) 611, 626, 1251, 1456
FriOI GRGCYC 1 cut(s) 361
Fsp4HI GCNGC 4 cut(s) 509, 531, 1152, 1155
FspBI CTAG 2 cut(s) 389, 1067
GluI GCNGC 4 cut(s) 509, 531, 1152, 1155
HaeIII GGCC 1 cut(s) 242
HapII CCGG 3 cut(s) 323, 526, 819
HgaI GACGC 2 cut(s) 716, 974
Hin1I GRCGYC 1 cut(s) 727
Hin1II CATG 5 cut(s) 482, 884, 1150, 1255, 1292
HincII GTYRAC 1 cut(s) 438
HindII GTYRAC 1 cut(s) 438
HindIII AAGCTT 2 cut(s) 518, 1100
HinfI GANTC 5 cut(s) 56, 282, 543, 631, 757
HpaI GTTAAC 1 cut(s) 438
HpaII CCGG 3 cut(s) 323, 526, 819
HphI GGTGA 3 cut(s) 409, 640, 1126
Hpy166II GTNNAC 2 cut(s) 353, 438
Hpy188III TCNNGA 5 cut(s) 479, 1045, 1216, 1252, 1337
Hpy8I GTNNAC 2 cut(s) 353, 438
Hpy99I CGWCG 1 cut(s) 588
HpyAV CCTTC 6 cut(s) 54, 127, 741, 1000, 1369, 1430
HpyCH4III ACNGT 5 cut(s) 256, 698, 862, 1286, 1465
HpyCH4IV ACGT 4 cut(s) 338, 537, 686, 1518
HpyCH4V TGCA 6 cut(s) 222, 271, 1094, 1195, 1279, 1367
HpyF10VI GCNNNNNNNGC 4 cut(s) 508, 517, 733, 1364
HpyF3I CTNAG 6 cut(s) 7, 444, 512, 759, 789, 1269
HpySE526I ACGT 4 cut(s) 338, 537, 686, 1518
Hsp92I GRCGYC 1 cut(s) 727
Hsp92II CATG 5 cut(s) 482, 884, 1150, 1255, 1292
Ksp22I TGATCA 2 cut(s) 414, 1047
KspAI GTTAAC 1 cut(s) 438
Kzo9I GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
LmnI GCTCC 3 cut(s) 772, 843, 1060
Lsp1109I GCAGC 4 cut(s) 520, 542, 1163, 1166
LweI GCATC 1 cut(s) 1273
MaeI CTAG 2 cut(s) 389, 1067
MaeII ACGT 4 cut(s) 338, 537, 686, 1518
MaeIII GTNAC 2 cut(s) 183, 1443
MalI GATC 6 cut(s) 416, 867, 1049, 1165, 1205, 1512
MbiI CCGCTC 1 cut(s) 89
MboI GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
MboII GAAGA 9 cut(s) 13, 129, 572, 616, 1094, 1129, 1315, 1318, 1429
MflI RGATCY 1 cut(s) 1163
MhlI GDGCHC 1 cut(s) 361
MluCI AATT 7 cut(s) 376, 409, 742, 993, 1395, 1425, 1506
MlyI GAGTC 1 cut(s) 751
MmeI TCCRAC 3 cut(s) 229, 259, 364
MroXI GAANNNNTTC 1 cut(s) 521
MseI TTAA 8 cut(s) 311, 375, 437, 654, 911, 996, 1398, 1460
MspA1I CMGCKG 2 cut(s) 511, 763
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 3 cut(s) 323, 526, 819
MspR9I CCNGG 5 cut(s) 323, 504, 527, 820, 1405
Mva1269I GAATGC 1 cut(s) 1367
MvaI CCWGG 2 cut(s) 504, 1405
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 4 cut(s) 508, 517, 733, 1364
NciI CCSGG 3 cut(s) 323, 527, 820
NdeII GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
NlaIII CATG 5 cut(s) 482, 884, 1150, 1255, 1292
NlaIV GGNNCC 2 cut(s) 457, 768
NmuCI GTSAC 1 cut(s) 1443
NspI RCATGY 1 cut(s) 884
NspV TTCGAA 1 cut(s) 1025
PagI TCATGA 2 cut(s) 478, 1251
PcsI WCGNNNNNNNCGW 1 cut(s) 683
PctI GAATGC 1 cut(s) 1367
PdmI GAANNNNTTC 1 cut(s) 521
PfeI GAWTC 4 cut(s) 56, 282, 543, 631
PkrI GCNGC 4 cut(s) 510, 532, 1153, 1156
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
Psp124BI GAGCTC 1 cut(s) 361
Psp6I CCWGG 2 cut(s) 502, 1403
PspGI CCWGG 2 cut(s) 502, 1403
PspN4I GGNNCC 2 cut(s) 457, 768
PspPI GGNCC 1 cut(s) 455
PstI CTGCAG 1 cut(s) 1281
PstNI CAGNNNCTG 1 cut(s) 1276
PsuI RGATCY 1 cut(s) 1163
PvuII CAGCTG 2 cut(s) 511, 763
RsaI GTAC 3 cut(s) 638, 1283, 1316
RsaNI GTAC 3 cut(s) 637, 1282, 1315
SacI GAGCTC 1 cut(s) 361
SaqAI TTAA 8 cut(s) 311, 375, 437, 654, 911, 996, 1398, 1460
SatI GCNGC 4 cut(s) 509, 531, 1152, 1155
Sau3AI GATC 6 cut(s) 414, 865, 1047, 1163, 1203, 1510
Sau96I GGNCC 1 cut(s) 455
ScaI AGTACT 1 cut(s) 1316
SchI GAGTC 1 cut(s) 751
ScrFI CCNGG 5 cut(s) 323, 504, 527, 820, 1405
SduI GDGCHC 1 cut(s) 361
SfaNI GCATC 1 cut(s) 1273
SfcI CTRYAG 1 cut(s) 1277
SfuI TTCGAA 1 cut(s) 1025
SinI GGWCC 1 cut(s) 455
SmlI CTYRAG 2 cut(s) 653, 1216
SmoI CTYRAG 2 cut(s) 653, 1216
Sse9I AATT 7 cut(s) 376, 409, 742, 993, 1395, 1425, 1506
SsiI CCGC 3 cut(s) 87, 275, 588
SspMI CTAG 2 cut(s) 389, 1067
SstI GAGCTC 1 cut(s) 361
StyD4I CCNGG 5 cut(s) 321, 502, 525, 818, 1403
StyI CCWWGG 1 cut(s) 1372
TaaI ACNGT 5 cut(s) 256, 698, 862, 1286, 1465
TaiI ACGT 4 cut(s) 341, 540, 689, 1521
TaqI TCGA 3 cut(s) 285, 1025, 1206
TasI AATT 7 cut(s) 376, 409, 742, 993, 1395, 1425, 1506
TatI WGTACW 3 cut(s) 636, 1281, 1314
TfiI GAWTC 4 cut(s) 56, 282, 543, 631
Tru1I TTAA 8 cut(s) 311, 375, 437, 654, 911, 996, 1398, 1460
Tru9I TTAA 8 cut(s) 311, 375, 437, 654, 911, 996, 1398, 1460
TscAI CASTG 4 cut(s) 261, 793, 865, 1452
TseFI GTSAC 1 cut(s) 1443
TseI GCWGC 4 cut(s) 508, 530, 1151, 1154
Tsp45I GTSAC 1 cut(s) 1443
TspDTI ATGAA 5 cut(s) 822, 933, 1341, 1425, 1458
TspGWI ACGGA 1 cut(s) 464
TspRI CASTG 4 cut(s) 261, 793, 865, 1452
Vha464I CTTAAG 1 cut(s) 653
VpaK11BI GGWCC 1 cut(s) 455
XapI RAATTY 1 cut(s) 1425
XceI RCATGY 1 cut(s) 884
XmnI GAANNNNTTC 1 cut(s) 521
XspI CTAG 2 cut(s) 389, 1067
ZrmI AGTACT 1 cut(s) 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.