RLG00000026154
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
874039 .. 875630
1592 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026154

Sequence Viewer

Length: 1524 bp
ATGGTCTCAGCCTACGCTCTCTTCACACACCCTTCCCCCACTTCTTCTTCTTCCGTTGATTATCTCCTTTCATACCCACCATCTCCTCCTTCCAAAGCAACCTTCCGTAGCCATGAATGGTTTCCTCTGCTAAAGCTCGCTAAAACCCCAAGACCTCAACCAAACCCCTTGTTACCCCAACTGGGTCTTGGACCCAATGCACAGTTTCTTCTCCAATGCAGCTCCAATCCGGTCACCGCCGATATAGGGACGGTCTTCTCGCTCTTACAAGCAGTTGGAATAGACGAGAAAGAAACAAAAGTGCTTTTGGAGAAGAACCCAGCTCTGGCTTTGACGTCTTTGGATTCGTTACGAGCTAGGATTGAGGGCTTCAATTCAGTTGGACTTGATGGGCTTGTGCTTTCCAATTTGATCACCAAATGTCCGAATTTGTTAACTGCTGAGGAGATTGATCCCTTTTTGAGTTTTGTCCGTCATGATATGGAAGCCAAACTTGAGCCGGGGCAGCTGAGGAGACTTTTTCGGGCAGCAGACGTTAGATTCTTGGTTGGATTTGATTATAAAGTCGGATTGCTTGTTCGTCGCGGAGTTCCGGAGGAGAAGATTGTTGACGTTCTCAACAAGGTGAATCTATACAAGGCATTGTGTCTCAAGTCAGCTGAGGAAATTGATAGGACTATCACATTCTTGAACCGTTTTGGTGGGATTGACTTGATTGTGAGGCGTCCATCCTTACTGAACTATGACTTGGAGACTCAGCTGGCTCCGAGAGTTGAGTTTCTCACTGAGGTTAGTGGTGGAGATGAAAATGCGACAGGGATTTTGTTGGGGAAGCTTCCTGCAATTTTGAGCTACACTGTGGATCACATAAAGGGCCATGTACAGTTGTTGAGGTCATTTGCTGGTTTAAGTGATGAACAGATATTCAAATTCTTGCTAGTTTTCCCCAATGTGGTTAGTGCCAGCAGGGAGAGGAAAATGCGTCCGAGAATTAAGTTTCTGAAGGAATGTGGGTTGAGTTCGAATGATATCTACAAGTTCTTGATCAAAGCTCCATTGTTTCTAGGCTTGTCGTTTGAAGACAACATTGCATATAAGCTTGTGTTTTTGGTGAAGATTGGGTATAGATATAGAACAAGGGAAATGGCAGCAGCAATGGGATCTGCCACTAGAACAAGCTCTGATAATTTGCAAAGGGTGATTGAGTTGTTCTTGAGTTATGGTTTTTCGTGTGCCGACATTGTTGTCATGAGCAGGAGGCATCCGCAGATACTGCAGTACAGTCATAGTGCGCTGGAGAAGAAGATGGAGTACTTGATCAATGATATGGGTCGTGAAATCGAAGAGTTATTGGCCTTTCCTGCATTCCTCGGTTACAAACTTGATGACAGAATTAAAGCCAGGTATGAAGTGAAGAGGAAGATTTTGGGGGAAGGAATGTCATTGAATAAGCTCTTAACTGTTTCATCTGAGAGTTTTAAACCAAAAACTCCTGCTTATGTAATTGATCTGAACGTGGAATGA

Protein Analysis

508

Amino Acids

56.93

Weight (kDa)

9.0

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 87 - 335 3.4e-18 mTERF
mTERF PF02536 326 - 494 4.2e-31 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014181)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 561
AasI GACNNNNNNGTC 1 cut(s) 1244
AatII GACGTC 1 cut(s) 338
AccII CGCG 1 cut(s) 585
AccIII TCCGGA 1 cut(s) 592
AciI CCGC 3 cut(s) 237, 585, 1265
AclWI GGATC 3 cut(s) 446, 870, 1168
AcsI RAATTY 2 cut(s) 427, 929
AcuI CTGAAG 1 cut(s) 1022
AcyI GRCGYC 2 cut(s) 335, 724
AfaI GTAC 3 cut(s) 882, 1280, 1313
AfiI CCNNNNNNNGG 4 cut(s) 182, 246, 325, 952
AgsI TTSAA 5 cut(s) 373, 691, 928, 1079, 1447
AjnI CCWGG 1 cut(s) 1400
AjuI GAANNNNNNNTTGG 4 cut(s) 86, 118, 731, 763
AloI GAACNNNNNNTCC 2 cut(s) 561, 593
Alw26I GTCTC 4 cut(s) 10, 508, 653, 746
AlwI GGATC 3 cut(s) 446, 870, 1168
AlwNI CAGNNNCTG 1 cut(s) 1273
Aor13HI TCCGGA 1 cut(s) 592
AoxI GGCC 2 cut(s) 874, 1353
ApeKI GCWGC 5 cut(s) 219, 505, 527, 1148, 1151
ApoI RAATTY 2 cut(s) 427, 929
ArsI GACNNNNNNTTYG 2 cut(s) 805, 837
Asp700I GAANNNNTTC 1 cut(s) 120
AspLEI GCGC 1 cut(s) 1294
AspS9I GGNCC 2 cut(s) 191, 874
AsuC2I CCSGG 1 cut(s) 501
AsuHPI GGTGA 5 cut(s) 226, 406, 637, 1123, 1210
AsuII TTCGAA 1 cut(s) 1022
AvaII GGWCC 1 cut(s) 191
BaeI ACNNNNGTAYC 2 cut(s) 1262, 1295
BarI GAAGNNNNNNTAC 2 cut(s) 1295, 1327
BbsI GAAGAC 2 cut(s) 247, 1086
BbvCI CCTCAGC 3 cut(s) 441, 509, 660
BbvI GCAGC 5 cut(s) 231, 517, 539, 1160, 1163
BccI CCATC 4 cut(s) 88, 383, 736, 1300
BciT130I CCWGG 1 cut(s) 1402
BclI TGATCA 3 cut(s) 411, 1044, 1317
BcnI CCSGG 1 cut(s) 501
BcoDI GTCTC 4 cut(s) 10, 508, 653, 746
BfaI CTAG 4 cut(s) 357, 938, 1064, 1170
BfmI CTRYAG 1 cut(s) 1274
BisI GCNGC 5 cut(s) 220, 506, 528, 1149, 1152
BlsI GCNGC 5 cut(s) 221, 507, 529, 1150, 1153
BmcAI AGTACT 1 cut(s) 1313
Bme1390I CCNGG 2 cut(s) 501, 1402
Bme18I GGWCC 1 cut(s) 191
BmgT120I GGNCC 2 cut(s) 191, 874
BmiI GGNNCC 2 cut(s) 193, 765
BmrFI CCNGG 2 cut(s) 501, 1402
BmrI ACTGGG 1 cut(s) 191
BmsI GCATC 1 cut(s) 1270
BmuI ACTGGG 1 cut(s) 191
BpiI GAAGAC 2 cut(s) 247, 1086
BpmI CTGGAG 1 cut(s) 1316
Bpu10I CCTNAGC 3 cut(s) 441, 509, 660
Bpu14I TTCGAA 1 cut(s) 1022
BpuEI CTTGAG 3 cut(s) 515, 635, 1234
BpuMI CCSGG 1 cut(s) 501
BsaHI GRCGYC 2 cut(s) 335, 724
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 2 cut(s) 500, 1369
BsaWI WCCGGW 2 cut(s) 229, 592
Bsc4I CCNNNNNNNGG 4 cut(s) 182, 246, 325, 952
Bse1I ACTGG 1 cut(s) 186
Bse3DI GCAATG 2 cut(s) 1086, 1161
BseAI TCCGGA 1 cut(s) 592
BseBI CCWGG 1 cut(s) 1402
BseDI CCNNGG 2 cut(s) 500, 1369
BseGI GGATG 2 cut(s) 728, 1261
BseLI CCNNNNNNNGG 4 cut(s) 182, 246, 325, 952
BseMI GCAATG 2 cut(s) 1086, 1161
BseMII CTCAG 7 cut(s) 21, 432, 500, 651, 770, 777, 1461
BseNI ACTGG 1 cut(s) 186
BseRI GAGGAG 4 cut(s) 75, 458, 526, 611
BseXI GCAGC 5 cut(s) 231, 517, 539, 1160, 1163
BseYI CCCAGC 1 cut(s) 319
Bsh1236I CGCG 1 cut(s) 585
BshFI GGCC 2 cut(s) 876, 1355
BsiSI CCGG 3 cut(s) 230, 500, 593
BslFI GGGAC 1 cut(s) 262
BslI CCNNNNNNNGG 4 cut(s) 182, 246, 325, 952
BsmAI GTCTC 4 cut(s) 10, 508, 653, 746
BsmFI GGGAC 1 cut(s) 262
BsmI GAATGC 1 cut(s) 1364
BsnI GGCC 2 cut(s) 876, 1355
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 1022
Bsp13I TCCGGA 1 cut(s) 592
Bsp1407I TGTACA 1 cut(s) 880
Bsp143I GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
BspACI CCGC 3 cut(s) 237, 585, 1265
BspANI GGCC 2 cut(s) 876, 1355
BspCNI CTCAG 7 cut(s) 20, 433, 501, 652, 769, 778, 1462
BspEI TCCGGA 1 cut(s) 592
BspFNI CGCG 1 cut(s) 585
BspHI TCATGA 2 cut(s) 475, 1248
BspLI GGNNCC 2 cut(s) 193, 765
BspMAI CTGCAG 1 cut(s) 1278
BspPI GGATC 3 cut(s) 446, 870, 1168
BspT104I TTCGAA 1 cut(s) 1022
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 2 cut(s) 1086, 1161
BsrGI TGTACA 1 cut(s) 880
BsrI ACTGG 1 cut(s) 186
BssECI CCNNGG 2 cut(s) 500, 1369
BssMI GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
BssNI GRCGYC 2 cut(s) 335, 724
Bst2UI CCWGG 1 cut(s) 1402
Bst4CI ACNGT 7 cut(s) 204, 253, 695, 859, 885, 1283, 1462
Bst6I CTCTTC 3 cut(s) 26, 1338, 1409
BstACI GRCGYC 2 cut(s) 335, 724
BstAPI GCANNNNNTGC 1 cut(s) 1273
BstAUI TGTACA 1 cut(s) 880
BstBI TTCGAA 1 cut(s) 1022
BstC8I GCNNGC 3 cut(s) 138, 762, 964
BstDEI CTNAG 7 cut(s) 7, 441, 509, 660, 756, 786, 1470
BstEII GGTNACC 1 cut(s) 232
BstF5I GGATG 2 cut(s) 728, 1261
BstFNI CGCG 1 cut(s) 585
BstHHI GCGC 1 cut(s) 1294
BstKTI GATC 7 cut(s) 414, 454, 865, 1047, 1163, 1320, 1510
BstMAI GTCTC 4 cut(s) 10, 508, 653, 746
BstMBI GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
BstMWI GCNNNNNNNGC 3 cut(s) 505, 1273, 1361
BstNI CCWGG 1 cut(s) 1402
BstPI GGTNACC 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 499, 1400
BstSFI CTRYAG 1 cut(s) 1274
BstUI CGCG 1 cut(s) 585
BstV1I GCAGC 5 cut(s) 231, 517, 539, 1160, 1163
BstV2I GAAGAC 2 cut(s) 247, 1086
BstX2I RGATCY 1 cut(s) 1160
BstYI RGATCY 1 cut(s) 1160
BsuRI GGCC 2 cut(s) 876, 1355
BtsCI GGATG 2 cut(s) 728, 1261
BtsIMutI CAGTG 2 cut(s) 783, 855
Cac8I GCNNGC 3 cut(s) 138, 762, 964
CaiI CAGNNNCTG 1 cut(s) 1273
CciI TCATGA 2 cut(s) 475, 1248
CfoI GCGC 1 cut(s) 1294
Cfr13I GGNCC 2 cut(s) 191, 874
CseI GACGC 2 cut(s) 713, 971
Csp6I GTAC 3 cut(s) 881, 1279, 1312
CviAII CATG 4 cut(s) 113, 476, 878, 1249
CviQI GTAC 3 cut(s) 881, 1279, 1312
DdeI CTNAG 7 cut(s) 7, 441, 509, 660, 756, 786, 1470
DpnI GATC 7 cut(s) 413, 453, 864, 1046, 1162, 1319, 1509
DpnII GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
DraI TTTAAA 1 cut(s) 1480
DrdI GACNNNNNNGTC 1 cut(s) 1244
DseDI GACNNNNNNGTC 1 cut(s) 1244
Eam1104I CTCTTC 3 cut(s) 26, 1338, 1409
EarI CTCTTC 3 cut(s) 26, 1338, 1409
Eco31I GGTCTC 1 cut(s) 10
Eco32I GATATC 1 cut(s) 1030
Eco47I GGWCC 1 cut(s) 191
Eco57I CTGAAG 1 cut(s) 1022
Eco91I GGTNACC 1 cut(s) 232
EcoO65I GGTNACC 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 1400
EcoRV GATATC 1 cut(s) 1030
FaeI CATG 4 cut(s) 116, 479, 881, 1252
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 1 cut(s) 262
FatI CATG 4 cut(s) 112, 475, 877, 1248
FbaI TGATCA 3 cut(s) 411, 1044, 1317
Fnu4HI GCNGC 5 cut(s) 220, 506, 528, 1149, 1152
FokI GGATG 2 cut(s) 715, 1248
Fsp4HI GCNGC 5 cut(s) 220, 506, 528, 1149, 1152
FspBI CTAG 4 cut(s) 357, 938, 1064, 1170
GlaI GCGC 1 cut(s) 1293
GluI GCNGC 5 cut(s) 220, 506, 528, 1149, 1152
GsaI CCCAGC 1 cut(s) 323
GsuI CTGGAG 1 cut(s) 1316
HaeIII GGCC 2 cut(s) 876, 1355
HapII CCGG 3 cut(s) 230, 500, 593
HgaI GACGC 2 cut(s) 713, 971
HhaI GCGC 1 cut(s) 1294
Hin1I GRCGYC 2 cut(s) 335, 724
Hin1II CATG 4 cut(s) 116, 479, 881, 1252
Hin6I GCGC 1 cut(s) 1292
HinP1I GCGC 1 cut(s) 1292
HincII GTYRAC 2 cut(s) 435, 610
HindII GTYRAC 2 cut(s) 435, 610
HindIII AAGCTT 2 cut(s) 833, 1097
HinfI GANTC 4 cut(s) 344, 540, 628, 754
HpaI GTTAAC 1 cut(s) 435
HpaII CCGG 3 cut(s) 230, 500, 593
HphI GGTGA 5 cut(s) 226, 406, 637, 1123, 1210
Hpy166II GTNNAC 2 cut(s) 435, 610
Hpy188I TCNGA 8 cut(s) 426, 569, 768, 987, 1002, 1183, 1471, 1512
Hpy188III TCNNGA 7 cut(s) 476, 593, 688, 1042, 1213, 1249, 1334
Hpy8I GTNNAC 2 cut(s) 435, 610
Hpy99I CGWCG 1 cut(s) 585
HpyAV CCTTC 5 cut(s) 42, 99, 112, 997, 1427
HpyCH4III ACNGT 7 cut(s) 204, 253, 695, 859, 885, 1283, 1462
HpyCH4IV ACGT 4 cut(s) 335, 534, 612, 1515
HpyCH4V TGCA 7 cut(s) 200, 219, 842, 1091, 1192, 1276, 1364
HpyF10VI GCNNNNNNNGC 3 cut(s) 505, 1273, 1361
HpyF3I CTNAG 7 cut(s) 7, 441, 509, 660, 756, 786, 1470
HpySE526I ACGT 4 cut(s) 335, 534, 612, 1515
Hsp92I GRCGYC 2 cut(s) 335, 724
Hsp92II CATG 4 cut(s) 116, 479, 881, 1252
HspAI GCGC 1 cut(s) 1292
Kpn2I TCCGGA 1 cut(s) 592
Ksp22I TGATCA 3 cut(s) 411, 1044, 1317
KspAI GTTAAC 1 cut(s) 435
Kzo9I GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
LmnI GCTCC 3 cut(s) 227, 769, 1057
Lsp1109I GCAGC 5 cut(s) 231, 517, 539, 1160, 1163
LweI GCATC 1 cut(s) 1270
MaeI CTAG 4 cut(s) 357, 938, 1064, 1170
MaeII ACGT 4 cut(s) 335, 534, 612, 1515
MaeIII GTNAC 4 cut(s) 171, 232, 348, 1373
MalI GATC 7 cut(s) 413, 453, 864, 1046, 1162, 1319, 1509
MboI GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
MflI RGATCY 1 cut(s) 1160
MlyI GAGTC 1 cut(s) 748
MmeI TCCRAC 4 cut(s) 256, 361, 529, 547
MroI TCCGGA 1 cut(s) 592
MroXI GAANNNNTTC 1 cut(s) 120
MseI TTAA 6 cut(s) 434, 908, 993, 1395, 1457, 1479
MspA1I CMGCKG 3 cut(s) 508, 659, 760
MspI CCGG 3 cut(s) 230, 500, 593
MspR9I CCNGG 2 cut(s) 501, 1402
Mva1269I GAATGC 1 cut(s) 1364
MvaI CCWGG 1 cut(s) 1402
MvnI CGCG 1 cut(s) 585
MwoI GCNNNNNNNGC 3 cut(s) 505, 1273, 1361
NciI CCSGG 1 cut(s) 501
NdeII GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
NlaIII CATG 4 cut(s) 116, 479, 881, 1252
NlaIV GGNNCC 2 cut(s) 193, 765
NmuCI GTSAC 1 cut(s) 232
NspV TTCGAA 1 cut(s) 1022
PagI TCATGA 2 cut(s) 475, 1248
PctI GAATGC 1 cut(s) 1364
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 3 cut(s) 344, 540, 628
PkrI GCNGC 5 cut(s) 221, 507, 529, 1150, 1153
PleI GAGTC 1 cut(s) 748
PpsI GAGTC 1 cut(s) 748
PsiI TTATAA 1 cut(s) 561
Psp6I CCWGG 1 cut(s) 1400
PspEI GGTNACC 1 cut(s) 232
PspFI CCCAGC 1 cut(s) 319
PspGI CCWGG 1 cut(s) 1400
PspN4I GGNNCC 2 cut(s) 193, 765
PspPI GGNCC 2 cut(s) 191, 874
PstI CTGCAG 1 cut(s) 1278
PstNI CAGNNNCTG 1 cut(s) 1273
PsuI RGATCY 1 cut(s) 1160
PvuII CAGCTG 3 cut(s) 508, 659, 760
RsaI GTAC 3 cut(s) 882, 1280, 1313
RsaNI GTAC 3 cut(s) 881, 1279, 1312
SaqAI TTAA 6 cut(s) 434, 908, 993, 1395, 1457, 1479
SatI GCNGC 5 cut(s) 220, 506, 528, 1149, 1152
Sau3AI GATC 7 cut(s) 411, 451, 862, 1044, 1160, 1317, 1507
Sau96I GGNCC 2 cut(s) 191, 874
ScaI AGTACT 1 cut(s) 1313
SchI GAGTC 1 cut(s) 748
ScrFI CCNGG 2 cut(s) 501, 1402
SfaNI GCATC 1 cut(s) 1270
SfcI CTRYAG 1 cut(s) 1274
SfuI TTCGAA 1 cut(s) 1022
SinI GGWCC 1 cut(s) 191
SmlI CTYRAG 3 cut(s) 494, 650, 1213
SmoI CTYRAG 3 cut(s) 494, 650, 1213
SsiI CCGC 3 cut(s) 237, 585, 1265
SspMI CTAG 4 cut(s) 357, 938, 1064, 1170
StyD4I CCNGG 2 cut(s) 499, 1400
TaaI ACNGT 7 cut(s) 204, 253, 695, 859, 885, 1283, 1462
TaiI ACGT 4 cut(s) 338, 537, 615, 1518
TaqI TCGA 2 cut(s) 1022, 1341
TatI WGTACW 3 cut(s) 880, 1278, 1311
TfiI GAWTC 3 cut(s) 344, 540, 628
Tru1I TTAA 6 cut(s) 434, 908, 993, 1395, 1457, 1479
Tru9I TTAA 6 cut(s) 434, 908, 993, 1395, 1457, 1479
TscAI CASTG 2 cut(s) 790, 862
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 5 cut(s) 219, 505, 527, 1148, 1151
Tsp45I GTSAC 1 cut(s) 232
TspDTI ATGAA 6 cut(s) 60, 129, 819, 930, 1422, 1455
TspGWI ACGGA 3 cut(s) 43, 95, 461
TspRI CASTG 2 cut(s) 790, 862
VpaK11BI GGWCC 1 cut(s) 191
XapI RAATTY 2 cut(s) 427, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 185
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 4 cut(s) 357, 938, 1064, 1170
ZraI GACGTC 1 cut(s) 336
ZrmI AGTACT 1 cut(s) 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.