RchiOBHm_Chr1g0382851
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
67457044 .. 67459026
1983 bp
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UTR
Exon/CDS
Intron
PRQ60579

Sequence Viewer

Length: 1527 bp
ATGGTCTCAGCCTACGCTCTCTTCACACACCCTTTCCCCACTTCTTCTTCTTCTTCCGTTGATTCTCTCTTTTCATACCCACCCCCTCCTCCTTCCAACGCAACCTTCCGTAGCCATGAATGGTTTCCTCTGCTAAAGCTCGCTAAAACCCCAAAACCTGAACCAAACCCCTTACTACCCCAACTGCGTCTTGGACCCAATGCACAGTTTCTTCTCCAATGCAGCTCCAATCCGGTCACCGCCGATATAGGGACGGTCTTCTCGCTCTTACAAGCAGTTGGAATAGACGAGAAAGAAACAAAAGTGCTTTTGGAGAAGAATCCAGCTCTGGCTTTGACGTGTTTGGATTCATTACGAGCTCGGATTGAGTGCTTTAATTCAGTTGGACTTGATGGGCTTGTGCTTTCCAATTTGATCACCAAATGTCCGAATTTGTTAACTGCTGAGGAGATTGATCCCTTTTTGAGTTTTGTCCGTCATGATATGGAAGCCAAAATTGAGCCGGGACAGCTGAGGAGACTTTTTCGGGCAGCAGACGTTAGATTCTTGGTGGGATTTGGTTATAAGGTAGGATTGCTTGTTCGTCGCGGAGTTCCGGAGGAGAAGATTGTTGATGTTCTCAACAAGGTGAATCTATACAAGGCATTGTGTCTCAAGTCAGCTGAGGAAATTGATAGGACTATCACATTCTTGAACCGTTTTGGTGGGATTGACTTGATTGTGAGGCGTCCATCGCTACTGAACTATGACTTGGAGACTCAGCTGGCTCCGAGAGTTGAGTTTCTCACTGAGGTTAGTGGCGGAGATGAAAATGCCACAGGGGTTTTGTTGGGGAAGCTTCCTGCAATTTTGAGCTACACTGTGGATCACACGAAGGGCCATGTAGAGTTGTTGAGGTCATTTGCTGGTTTAAGTGATGAACAGATATTCAAATTCTTGCTAGTTTTCCCCAATGTGGTTAGTGCCAGCAGGGAGAGGAAAATGCGTCCGAGAATTAAGTTTCTCAAGGAATGTGGGTTGAGTTCGAATGATATCTACAAGTTCTTGATCAAAGCCCCATTGTTTCTAGGCTTGTCGTTTGAAGACAACATTGCATATAAGCTTGTGTTTTTGGTGAAGATTGGGTATAGATATAGAACAAGGGACATGGCAGCAGCAATGGGATCTGCCACCAGAACAAGCTCTGATAATTTGCAAAGGGTGATTGAGTTGTTCTTGATTTATGGTTTTTCGTGTGCCGACATTGTTGTCATGAGCAGGAGGCACCCGCAGATACTGCAGTACAGTCATAGTGCGTTGGAGAAGAAGATGGAGTACTTGATAAATGATATGGGTCGTGAAATCGAAGAGTTATTAGCCTTTCCTGCATTCCTTGGTTACAAGCTTGATGACAGAATTAAAGCCAGGTATGAAGTGAAGAGGAAGATTTTGGGGGAAGGAATGTCACTGAATAAGCTCTTGACTGTTTCATCTGAGAGTTTTAAACCAAAAACTCCTGCTTATGTAATTGATCTGAACGTGGAATGA

Protein Analysis

508

Amino Acids

57.1

Weight (kDa)

8.84

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 88 - 336 2.2e-17 mTERF
mTERF PF02536 327 - 495 3.3e-30 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014181)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 564
AasI GACNNNNNNGTC 1 cut(s) 1247
AccB1I GGYRCC 1 cut(s) 1263
AccII CGCG 1 cut(s) 588
AccIII TCCGGA 1 cut(s) 595
AciI CCGC 4 cut(s) 240, 588, 801, 1268
AclWI GGATC 3 cut(s) 449, 873, 1171
AcsI RAATTY 2 cut(s) 430, 932
AcyI GRCGYC 1 cut(s) 727
AfaI GTAC 2 cut(s) 1283, 1316
AfiI CCNNNNNNNGG 2 cut(s) 249, 955
AflIII ACRYGT 1 cut(s) 338
AgsI TTSAA 3 cut(s) 694, 931, 1082
AjiI CACGTC 1 cut(s) 339
AjnI CCWGG 1 cut(s) 1403
AjuI GAANNNNNNNTTGG 4 cut(s) 89, 121, 734, 766
AloI GAACNNNNNNTCC 2 cut(s) 564, 596
Alw21I GWGCWC 1 cut(s) 361
Alw26I GTCTC 4 cut(s) 10, 511, 656, 749
AlwI GGATC 3 cut(s) 449, 873, 1171
AlwNI CAGNNNCTG 1 cut(s) 1276
Aor13HI TCCGGA 1 cut(s) 595
AoxI GGCC 1 cut(s) 877
ApeKI GCWGC 4 cut(s) 222, 530, 1151, 1154
ApoI RAATTY 2 cut(s) 430, 932
Asp700I GAANNNNTTC 1 cut(s) 123
AspS9I GGNCC 2 cut(s) 194, 877
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 5 cut(s) 229, 409, 640, 1126, 1213
AsuII TTCGAA 1 cut(s) 1025
AvaII GGWCC 1 cut(s) 194
BaeI ACNNNNGTAYC 2 cut(s) 1265, 1298
BanI GGYRCC 1 cut(s) 1263
BanII GRGCYC 1 cut(s) 361
BarI GAAGNNNNNNTAC 2 cut(s) 1298, 1330
BbsI GAAGAC 2 cut(s) 250, 1089
Bbv12I GWGCWC 1 cut(s) 361
BbvCI CCTCAGC 3 cut(s) 444, 512, 663
BbvI GCAGC 4 cut(s) 234, 542, 1163, 1166
BccI CCATC 3 cut(s) 386, 739, 1303
BciT130I CCWGG 1 cut(s) 1405
BclI TGATCA 2 cut(s) 414, 1047
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 4 cut(s) 10, 511, 656, 749
BfaI CTAG 2 cut(s) 941, 1067
BfmI CTRYAG 1 cut(s) 1277
BisI GCNGC 4 cut(s) 223, 531, 1152, 1155
BlsI GCNGC 4 cut(s) 224, 532, 1153, 1156
BmcAI AGTACT 1 cut(s) 1316
Bme1390I CCNGG 2 cut(s) 504, 1405
Bme18I GGWCC 1 cut(s) 194
BmgBI CACGTC 1 cut(s) 339
BmgT120I GGNCC 2 cut(s) 194, 877
BmiI GGNNCC 3 cut(s) 196, 768, 1265
BmrFI CCNGG 2 cut(s) 504, 1405
BpiI GAAGAC 2 cut(s) 250, 1089
Bpu10I CCTNAGC 3 cut(s) 444, 512, 663
Bpu14I TTCGAA 1 cut(s) 1025
BpuEI CTTGAG 2 cut(s) 638, 989
BpuMI CCSGG 1 cut(s) 504
BsaHI GRCGYC 1 cut(s) 727
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 1 cut(s) 1372
BsaWI WCCGGW 2 cut(s) 232, 595
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 955
Bse3DI GCAATG 2 cut(s) 1089, 1164
BseAI TCCGGA 1 cut(s) 595
BseBI CCWGG 1 cut(s) 1405
BseDI CCNNGG 1 cut(s) 1372
BseLI CCNNNNNNNGG 2 cut(s) 249, 955
BseMI GCAATG 2 cut(s) 1089, 1164
BseMII CTCAG 7 cut(s) 21, 435, 503, 654, 773, 780, 1464
BseRI GAGGAG 4 cut(s) 78, 461, 529, 614
BseXI GCAGC 4 cut(s) 234, 542, 1163, 1166
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 1 cut(s) 879
BshNI GGYRCC 1 cut(s) 1263
BsiHKAI GWGCWC 1 cut(s) 361
BsiSI CCGG 3 cut(s) 233, 503, 596
BslFI GGGAC 3 cut(s) 265, 519, 1157
BslI CCNNNNNNNGG 2 cut(s) 249, 955
BsmAI GTCTC 4 cut(s) 10, 511, 656, 749
BsmFI GGGAC 3 cut(s) 265, 519, 1157
BsmI GAATGC 1 cut(s) 1367
BsnI GGCC 1 cut(s) 879
Bso31I GGTCTC 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 1025
Bsp1286I GDGCHC 1 cut(s) 361
Bsp13I TCCGGA 1 cut(s) 595
Bsp143I GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
BspACI CCGC 4 cut(s) 240, 588, 801, 1268
BspANI GGCC 1 cut(s) 879
BspCNI CTCAG 7 cut(s) 20, 436, 504, 655, 772, 781, 1465
BspEI TCCGGA 1 cut(s) 595
BspFNI CGCG 1 cut(s) 588
BspHI TCATGA 2 cut(s) 478, 1251
BspLI GGNNCC 3 cut(s) 196, 768, 1265
BspMAI CTGCAG 1 cut(s) 1281
BspPI GGATC 3 cut(s) 449, 873, 1171
BspT104I TTCGAA 1 cut(s) 1025
BspT107I GGYRCC 1 cut(s) 1263
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 2 cut(s) 1089, 1164
BssECI CCNNGG 1 cut(s) 1372
BssMI GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
BssNI GRCGYC 1 cut(s) 727
BssT1I CCWWGG 1 cut(s) 1372
Bst2UI CCWGG 1 cut(s) 1405
Bst4CI ACNGT 6 cut(s) 207, 256, 698, 862, 1286, 1465
Bst6I CTCTTC 3 cut(s) 26, 1341, 1412
BstACI GRCGYC 1 cut(s) 727
BstAPI GCANNNNNTGC 1 cut(s) 1276
BstBI TTCGAA 1 cut(s) 1025
BstC8I GCNNGC 3 cut(s) 141, 765, 967
BstDEI CTNAG 7 cut(s) 7, 444, 512, 663, 759, 789, 1473
BstEII GGTNACC 1 cut(s) 235
BstFNI CGCG 1 cut(s) 588
BstKTI GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
BstMAI GTCTC 4 cut(s) 10, 511, 656, 749
BstMBI GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
BstMWI GCNNNNNNNGC 4 cut(s) 508, 733, 1276, 1364
BstNI CCWGG 1 cut(s) 1405
BstPI GGTNACC 1 cut(s) 235
BstSCI CCNGG 2 cut(s) 502, 1403
BstSFI CTRYAG 1 cut(s) 1277
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 4 cut(s) 234, 542, 1163, 1166
BstV2I GAAGAC 2 cut(s) 250, 1089
BstX2I RGATCY 1 cut(s) 1163
BstYI RGATCY 1 cut(s) 1163
BsuRI GGCC 1 cut(s) 879
BtgZI GCGATG 1 cut(s) 717
BtrI CACGTC 1 cut(s) 339
BtsIMutI CAGTG 3 cut(s) 786, 858, 1445
Cac8I GCNNGC 3 cut(s) 141, 765, 967
CaiI CAGNNNCTG 1 cut(s) 1276
CciI TCATGA 2 cut(s) 478, 1251
Cfr13I GGNCC 2 cut(s) 194, 877
CseI GACGC 3 cut(s) 176, 716, 974
Csp6I GTAC 2 cut(s) 1282, 1315
CspCI CAANNNNNGTGG 2 cut(s) 994, 1029
CviAII CATG 5 cut(s) 116, 479, 881, 1147, 1252
CviQI GTAC 2 cut(s) 1282, 1315
DdeI CTNAG 7 cut(s) 7, 444, 512, 663, 759, 789, 1473
DpnI GATC 6 cut(s) 416, 456, 867, 1049, 1165, 1512
DpnII GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
DraI TTTAAA 1 cut(s) 1483
DrdI GACNNNNNNGTC 1 cut(s) 1247
DseDI GACNNNNNNGTC 1 cut(s) 1247
Eam1104I CTCTTC 3 cut(s) 26, 1341, 1412
EarI CTCTTC 3 cut(s) 26, 1341, 1412
EciI GGCGGA 1 cut(s) 816
Ecl136II GAGCTC 1 cut(s) 359
Eco130I CCWWGG 1 cut(s) 1372
Eco24I GRGCYC 1 cut(s) 361
Eco31I GGTCTC 1 cut(s) 10
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 1 cut(s) 194
Eco53kI GAGCTC 1 cut(s) 359
Eco91I GGTNACC 1 cut(s) 235
EcoICRI GAGCTC 1 cut(s) 359
EcoO65I GGTNACC 1 cut(s) 235
EcoRII CCWGG 1 cut(s) 1403
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 1 cut(s) 1372
EcoT38I GRGCYC 1 cut(s) 361
ErhI CCWWGG 1 cut(s) 1372
FaeI CATG 5 cut(s) 119, 482, 884, 1150, 1255
FaqI GGGAC 3 cut(s) 265, 519, 1157
FatI CATG 5 cut(s) 115, 478, 880, 1146, 1251
FauI CCCGC 1 cut(s) 1275
FbaI TGATCA 2 cut(s) 414, 1047
Fnu4HI GCNGC 4 cut(s) 223, 531, 1152, 1155
FriOI GRGCYC 1 cut(s) 361
Fsp4HI GCNGC 4 cut(s) 223, 531, 1152, 1155
FspBI CTAG 2 cut(s) 941, 1067
GluI GCNGC 4 cut(s) 223, 531, 1152, 1155
HaeIII GGCC 1 cut(s) 879
HapII CCGG 3 cut(s) 233, 503, 596
HgaI GACGC 3 cut(s) 176, 716, 974
Hin1I GRCGYC 1 cut(s) 727
Hin1II CATG 5 cut(s) 119, 482, 884, 1150, 1255
HincII GTYRAC 1 cut(s) 438
HindII GTYRAC 1 cut(s) 438
HindIII AAGCTT 3 cut(s) 836, 1100, 1382
HinfI GANTC 6 cut(s) 62, 319, 347, 543, 631, 757
HpaI GTTAAC 1 cut(s) 438
HpaII CCGG 3 cut(s) 233, 503, 596
HphI GGTGA 5 cut(s) 229, 409, 640, 1126, 1213
Hpy166II GTNNAC 1 cut(s) 438
Hpy188I TCNGA 7 cut(s) 363, 429, 771, 990, 1186, 1474, 1515
Hpy188III TCNNGA 8 cut(s) 479, 596, 691, 1045, 1216, 1252, 1337, 1459
Hpy8I GTNNAC 1 cut(s) 438
Hpy99I CGWCG 1 cut(s) 588
HpyAV CCTTC 4 cut(s) 102, 115, 868, 1430
HpyCH4III ACNGT 6 cut(s) 207, 256, 698, 862, 1286, 1465
HpyCH4IV ACGT 3 cut(s) 338, 537, 1518
HpyCH4V TGCA 7 cut(s) 203, 222, 845, 1094, 1195, 1279, 1367
HpyF10VI GCNNNNNNNGC 4 cut(s) 508, 733, 1276, 1364
HpyF3I CTNAG 7 cut(s) 7, 444, 512, 663, 759, 789, 1473
HpySE526I ACGT 3 cut(s) 338, 537, 1518
Hsp92I GRCGYC 1 cut(s) 727
Hsp92II CATG 5 cut(s) 119, 482, 884, 1150, 1255
Kpn2I TCCGGA 1 cut(s) 595
Ksp22I TGATCA 2 cut(s) 414, 1047
KspAI GTTAAC 1 cut(s) 438
Kzo9I GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
LmnI GCTCC 2 cut(s) 230, 772
Lsp1109I GCAGC 4 cut(s) 234, 542, 1163, 1166
MaeI CTAG 2 cut(s) 941, 1067
MaeII ACGT 3 cut(s) 338, 537, 1518
MaeIII GTNAC 3 cut(s) 235, 1376, 1443
MalI GATC 6 cut(s) 416, 456, 867, 1049, 1165, 1512
MboI GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
MflI RGATCY 1 cut(s) 1163
MhlI GDGCHC 1 cut(s) 361
MlyI GAGTC 1 cut(s) 751
MmeI TCCRAC 4 cut(s) 120, 259, 364, 1278
MroI TCCGGA 1 cut(s) 595
MroXI GAANNNNTTC 1 cut(s) 123
MseI TTAA 6 cut(s) 375, 437, 911, 996, 1398, 1482
MspA1I CMGCKG 3 cut(s) 511, 662, 763
MspI CCGG 3 cut(s) 233, 503, 596
MspR9I CCNGG 2 cut(s) 504, 1405
Mva1269I GAATGC 1 cut(s) 1367
MvaI CCWGG 1 cut(s) 1405
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 4 cut(s) 508, 733, 1276, 1364
NciI CCSGG 1 cut(s) 504
NdeII GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
NlaIII CATG 5 cut(s) 119, 482, 884, 1150, 1255
NlaIV GGNNCC 3 cut(s) 196, 768, 1265
NmuCI GTSAC 2 cut(s) 235, 1443
NspV TTCGAA 1 cut(s) 1025
PagI TCATGA 2 cut(s) 478, 1251
PctI GAATGC 1 cut(s) 1367
PdmI GAANNNNTTC 1 cut(s) 123
PfeI GAWTC 5 cut(s) 62, 319, 347, 543, 631
PkrI GCNGC 4 cut(s) 224, 532, 1153, 1156
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
PsiI TTATAA 1 cut(s) 564
Psp124BI GAGCTC 1 cut(s) 361
Psp6I CCWGG 1 cut(s) 1403
PspEI GGTNACC 1 cut(s) 235
PspGI CCWGG 1 cut(s) 1403
PspN4I GGNNCC 3 cut(s) 196, 768, 1265
PspPI GGNCC 2 cut(s) 194, 877
PstI CTGCAG 1 cut(s) 1281
PstNI CAGNNNCTG 1 cut(s) 1276
PsuI RGATCY 1 cut(s) 1163
PvuII CAGCTG 3 cut(s) 511, 662, 763
RsaI GTAC 2 cut(s) 1283, 1316
RsaNI GTAC 2 cut(s) 1282, 1315
SacI GAGCTC 1 cut(s) 361
SaqAI TTAA 6 cut(s) 375, 437, 911, 996, 1398, 1482
SatI GCNGC 4 cut(s) 223, 531, 1152, 1155
Sau3AI GATC 6 cut(s) 414, 454, 865, 1047, 1163, 1510
Sau96I GGNCC 2 cut(s) 194, 877
ScaI AGTACT 1 cut(s) 1316
SchI GAGTC 1 cut(s) 751
ScrFI CCNGG 2 cut(s) 504, 1405
SduI GDGCHC 1 cut(s) 361
SfcI CTRYAG 1 cut(s) 1277
SfuI TTCGAA 1 cut(s) 1025
SinI GGWCC 1 cut(s) 194
SmlI CTYRAG 2 cut(s) 653, 1004
SmoI CTYRAG 2 cut(s) 653, 1004
SsiI CCGC 4 cut(s) 240, 588, 801, 1268
SspMI CTAG 2 cut(s) 941, 1067
SstI GAGCTC 1 cut(s) 361
StyD4I CCNGG 2 cut(s) 502, 1403
StyI CCWWGG 1 cut(s) 1372
TaaI ACNGT 6 cut(s) 207, 256, 698, 862, 1286, 1465
TaiI ACGT 3 cut(s) 341, 540, 1521
TaqI TCGA 2 cut(s) 1025, 1344
TatI WGTACW 2 cut(s) 1281, 1314
TfiI GAWTC 5 cut(s) 62, 319, 347, 543, 631
Tru1I TTAA 6 cut(s) 375, 437, 911, 996, 1398, 1482
Tru9I TTAA 6 cut(s) 375, 437, 911, 996, 1398, 1482
TscAI CASTG 3 cut(s) 793, 865, 1452
TseFI GTSAC 2 cut(s) 235, 1443
TseI GCWGC 4 cut(s) 222, 530, 1151, 1154
Tsp45I GTSAC 2 cut(s) 235, 1443
TspDTI ATGAA 7 cut(s) 63, 132, 339, 822, 933, 1425, 1458
TspGWI ACGGA 3 cut(s) 46, 98, 464
TspRI CASTG 3 cut(s) 793, 865, 1452
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 2 cut(s) 430, 932
XcmI CCANNNNNNNNNTGG 1 cut(s) 188
XmnI GAANNNNTTC 1 cut(s) 123
XspI CTAG 2 cut(s) 941, 1067
ZrmI AGTACT 1 cut(s) 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.