Rh1AG461800
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
67844442 .. 67846044
1603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG461800.1

Sequence Viewer

Length: 1530 bp
ATGGTCTCAGCCTACGCTCTCTTCACACACCCTTTCCCCACTTCTTCTTCTTCTTCTTCCGTTGATTATCTCTTTTCATACCCACCCCCTCCTCCTTCCAACGCAACCTTCCGTAGCCATGAATGGTTTCCTCTGCTAAAGCTCGCTAAAACCCCAAGACCTGAACCAAACCCCTTACTACCCCAACTGGGTCTCCGACCCAATGCACAGTTTCTTCTCCAATGCAGCTCCAATCCGGTCACCGCCGATATAGGGACGGTCTTCTCGCTCTTACAAGCAGTTGGAATAGACGAGAAAGAAACAAAAGTGCTTTTGGAGAAGAATCCAGCTCTGTCTTTGACGTCTTTGGATTCATTACGAGCTCGGATTGAGTGCTTCAATTCAGTTGGACTTGATGGGCTTGTGCTTTCCAATTTGATCACCAAATGTCCGAATTTGTTAACTGCTGAGGAGATTGATCCGTTTTTGAGTTTTGTCCGTCATGATATGGAAGCCAAACTTGAGCCGGGGCAGCTGAGGAGACTTTTTCGGGCAGCAGACGTTAGATTCTTGGTGGGATTTGATTATAAGGTAGGATTGCTTGTTCGTCGCGGAGTTCCGGAGGAGAAGATTGTTGATGTTCTCAACAAGGTGAATCTATACAAGGCATTGTGTCTTAAGTCAGCTGAGGAAATTGATAGGACTATCACATTCTTGAACCGTTTTGGTGGGATTGACTTGATTGTGAGGCGTCCATCGTTACTGAACTATGACTTGGAGACTCAGCTGGCTCCGAGAGTTGAGTTTCTCACTGAGGTTAGTGGTGGAGATGAAAATGCCACAGGGGTTTTGTTGGGGAAGCTTCCTGCAATTTTGAGCTACACTGTGGATCACACAAAGGGCCATGTAGAGTTGTTGAGGTCATTTGCTGGTTTAAGTGATGAACAGATATTCAAATTCTTGCTAGTTTTCCCCAATGTGGTTAGTGCCAGCAGGGAGAGGAAAATGCGTCCGAGAATTAAGTTTCTGAAGGAATGTGGGTTGAGTTCGAATGATATCTACAAGTTCTTGATCAAAGCTCCATTGTTTCTAGGCTTGTCGTTTGAAGACAACATTGCATATAAGCTTGTGTTTTTGGTGAAGATTGGGTATAGATATAGAACAAGGGACATGGCAGCAGCAATGGGATCTGCCACCAGAACAAGCTTTGATAATTTGCAAAGGGTGATTGAGTTGTTCTTGAGTTATGGTTTTTCGTGTGCCGACATTGTTGTCATGAGCAGGAGGCATCCGCAGATACTGCAGTACAGTCATAGTGCTTTGGAGAAGAAGATGGAGTACTTGATAAATGATATGGGTCGTGAAATCGAAGAGTTATTAGCCTTTCCTGCATTCCTTGGTTACAAGCTTGATGACAGAATTAAAGCCAGGTATGAAGTGAAGAGGAAGATTTTGGGGGAAGGAATGTCACTGAATAAGCTCTTAACTGTTTCATCTGAGAGCTTTAAACCAAAAACTCCTGCTTATGTAATTGATCTGAACGTGGAATGA

Protein Analysis

509

Amino Acids

57.38

Weight (kDa)

8.78

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 89 - 374 3.4e-22 mTERF
mTERF PF02536 328 - 496 2.2e-30 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014181)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 567
AasI GACNNNNNNGTC 1 cut(s) 1250
AatII GACGTC 1 cut(s) 344
AccII CGCG 1 cut(s) 591
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 3 cut(s) 243, 591, 1271
AclWI GGATC 3 cut(s) 452, 876, 1174
AcsI RAATTY 2 cut(s) 433, 935
AcuI CTGAAG 1 cut(s) 1028
AcyI GRCGYC 2 cut(s) 341, 730
AfaI GTAC 2 cut(s) 1286, 1319
AfiI CCNNNNNNNGG 3 cut(s) 188, 252, 958
AflII CTTAAG 1 cut(s) 656
AgsI TTSAA 4 cut(s) 379, 697, 934, 1085
AjnI CCWGG 1 cut(s) 1406
AjuI GAANNNNNNNTTGG 4 cut(s) 92, 124, 737, 769
AloI GAACNNNNNNTCC 2 cut(s) 567, 599
Alw21I GWGCWC 1 cut(s) 364
Alw26I GTCTC 4 cut(s) 10, 197, 514, 752
AlwI GGATC 3 cut(s) 452, 876, 1174
AlwNI CAGNNNCTG 1 cut(s) 1279
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 1 cut(s) 880
ApeKI GCWGC 5 cut(s) 225, 511, 533, 1154, 1157
ApoI RAATTY 2 cut(s) 433, 935
Asp700I GAANNNNTTC 1 cut(s) 126
AspS9I GGNCC 1 cut(s) 880
AsuC2I CCSGG 1 cut(s) 507
AsuHPI GGTGA 5 cut(s) 232, 412, 643, 1129, 1216
AsuII TTCGAA 1 cut(s) 1028
BaeI ACNNNNGTAYC 2 cut(s) 1268, 1301
BanII GRGCYC 1 cut(s) 364
BarI GAAGNNNNNNTAC 2 cut(s) 1301, 1333
BbsI GAAGAC 2 cut(s) 253, 1092
Bbv12I GWGCWC 1 cut(s) 364
BbvCI CCTCAGC 3 cut(s) 447, 515, 666
BbvI GCAGC 5 cut(s) 237, 523, 545, 1166, 1169
BccI CCATC 3 cut(s) 389, 742, 1306
BciT130I CCWGG 1 cut(s) 1408
BclI TGATCA 2 cut(s) 417, 1050
BcnI CCSGG 1 cut(s) 507
BcoDI GTCTC 4 cut(s) 10, 197, 514, 752
BfaI CTAG 2 cut(s) 944, 1070
BfmI CTRYAG 1 cut(s) 1280
BfrI CTTAAG 1 cut(s) 656
BisI GCNGC 5 cut(s) 226, 512, 534, 1155, 1158
BlsI GCNGC 5 cut(s) 227, 513, 535, 1156, 1159
BmcAI AGTACT 1 cut(s) 1319
Bme1390I CCNGG 2 cut(s) 507, 1408
BmgT120I GGNCC 1 cut(s) 880
BmiI GGNNCC 1 cut(s) 771
BmrFI CCNGG 2 cut(s) 507, 1408
BmrI ACTGGG 1 cut(s) 197
BmsI GCATC 1 cut(s) 1276
BmuI ACTGGG 1 cut(s) 197
BpiI GAAGAC 2 cut(s) 253, 1092
Bpu10I CCTNAGC 3 cut(s) 447, 515, 666
Bpu14I TTCGAA 1 cut(s) 1028
BpuEI CTTGAG 2 cut(s) 521, 1240
BpuMI CCSGG 1 cut(s) 507
BsaHI GRCGYC 2 cut(s) 341, 730
BsaI GGTCTC 2 cut(s) 10, 197
BsaJI CCNNGG 2 cut(s) 506, 1375
BsaWI WCCGGW 2 cut(s) 235, 598
BsaXI ACNNNNNCTCC 2 cut(s) 177, 207
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 252, 958
Bse1I ACTGG 1 cut(s) 192
Bse3DI GCAATG 2 cut(s) 1092, 1167
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 1 cut(s) 1408
BseDI CCNNGG 2 cut(s) 506, 1375
BseGI GGATG 1 cut(s) 1267
BseLI CCNNNNNNNGG 3 cut(s) 188, 252, 958
BseMI GCAATG 2 cut(s) 1092, 1167
BseMII CTCAG 7 cut(s) 21, 438, 506, 657, 776, 783, 1467
BseNI ACTGG 1 cut(s) 192
BseRI GAGGAG 4 cut(s) 81, 464, 532, 617
BseXI GCAGC 5 cut(s) 237, 523, 545, 1166, 1169
Bsh1236I CGCG 1 cut(s) 591
BshFI GGCC 1 cut(s) 882
BsiHKAI GWGCWC 1 cut(s) 364
BsiSI CCGG 3 cut(s) 236, 506, 599
BslFI GGGAC 2 cut(s) 268, 1160
BslI CCNNNNNNNGG 3 cut(s) 188, 252, 958
BsmAI GTCTC 4 cut(s) 10, 197, 514, 752
BsmFI GGGAC 2 cut(s) 268, 1160
BsmI GAATGC 1 cut(s) 1370
BsnI GGCC 1 cut(s) 882
Bso31I GGTCTC 2 cut(s) 10, 197
Bsp119I TTCGAA 1 cut(s) 1028
Bsp1286I GDGCHC 1 cut(s) 364
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
BspACI CCGC 3 cut(s) 243, 591, 1271
BspANI GGCC 1 cut(s) 882
BspCNI CTCAG 7 cut(s) 20, 439, 507, 658, 775, 784, 1468
BspEI TCCGGA 1 cut(s) 598
BspFNI CGCG 1 cut(s) 591
BspHI TCATGA 2 cut(s) 481, 1254
BspLI GGNNCC 1 cut(s) 771
BspMAI CTGCAG 1 cut(s) 1284
BspPI GGATC 3 cut(s) 452, 876, 1174
BspT104I TTCGAA 1 cut(s) 1028
BspTI CTTAAG 1 cut(s) 656
BspTNI GGTCTC 2 cut(s) 10, 197
BsrDI GCAATG 2 cut(s) 1092, 1167
BsrI ACTGG 1 cut(s) 192
BssECI CCNNGG 2 cut(s) 506, 1375
BssMI GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
BssNI GRCGYC 2 cut(s) 341, 730
BssT1I CCWWGG 1 cut(s) 1375
Bst2UI CCWGG 1 cut(s) 1408
Bst4CI ACNGT 6 cut(s) 210, 259, 701, 865, 1289, 1468
Bst6I CTCTTC 3 cut(s) 26, 1344, 1415
BstACI GRCGYC 2 cut(s) 341, 730
BstAFI CTTAAG 1 cut(s) 656
BstAPI GCANNNNNTGC 1 cut(s) 1279
BstBI TTCGAA 1 cut(s) 1028
BstC8I GCNNGC 3 cut(s) 144, 768, 970
BstDEI CTNAG 7 cut(s) 7, 447, 515, 666, 762, 792, 1476
BstEII GGTNACC 1 cut(s) 238
BstF5I GGATG 1 cut(s) 1267
BstFNI CGCG 1 cut(s) 591
BstKTI GATC 6 cut(s) 420, 460, 871, 1053, 1169, 1516
BstMAI GTCTC 4 cut(s) 10, 197, 514, 752
BstMBI GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
BstMWI GCNNNNNNNGC 3 cut(s) 511, 1279, 1367
BstNI CCWGG 1 cut(s) 1408
BstPI GGTNACC 1 cut(s) 238
BstSCI CCNGG 2 cut(s) 505, 1406
BstSFI CTRYAG 1 cut(s) 1280
BstUI CGCG 1 cut(s) 591
BstV1I GCAGC 5 cut(s) 237, 523, 545, 1166, 1169
BstV2I GAAGAC 2 cut(s) 253, 1092
BstX2I RGATCY 1 cut(s) 1166
BstYI RGATCY 1 cut(s) 1166
BsuRI GGCC 1 cut(s) 882
BtsCI GGATG 1 cut(s) 1267
BtsIMutI CAGTG 3 cut(s) 789, 861, 1448
Cac8I GCNNGC 3 cut(s) 144, 768, 970
CaiI CAGNNNCTG 1 cut(s) 1279
CciI TCATGA 2 cut(s) 481, 1254
Cfr13I GGNCC 1 cut(s) 880
CseI GACGC 2 cut(s) 719, 977
Csp6I GTAC 2 cut(s) 1285, 1318
CviAII CATG 5 cut(s) 119, 482, 884, 1150, 1255
CviQI GTAC 2 cut(s) 1285, 1318
DdeI CTNAG 7 cut(s) 7, 447, 515, 666, 762, 792, 1476
DpnI GATC 6 cut(s) 419, 459, 870, 1052, 1168, 1515
DpnII GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
DraI TTTAAA 1 cut(s) 1486
DrdI GACNNNNNNGTC 1 cut(s) 1250
DseDI GACNNNNNNGTC 1 cut(s) 1250
Eam1104I CTCTTC 3 cut(s) 26, 1344, 1415
EarI CTCTTC 3 cut(s) 26, 1344, 1415
Ecl136II GAGCTC 1 cut(s) 362
Eco130I CCWWGG 1 cut(s) 1375
Eco24I GRGCYC 1 cut(s) 364
Eco31I GGTCTC 2 cut(s) 10, 197
Eco32I GATATC 1 cut(s) 1036
Eco53kI GAGCTC 1 cut(s) 362
Eco57I CTGAAG 1 cut(s) 1028
Eco91I GGTNACC 1 cut(s) 238
EcoICRI GAGCTC 1 cut(s) 362
EcoO65I GGTNACC 1 cut(s) 238
EcoRII CCWGG 1 cut(s) 1406
EcoRV GATATC 1 cut(s) 1036
EcoT14I CCWWGG 1 cut(s) 1375
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 1 cut(s) 1375
FaeI CATG 5 cut(s) 122, 485, 887, 1153, 1258
FalI AAGNNNNNCTT 2 cut(s) 483, 515
FaqI GGGAC 2 cut(s) 268, 1160
FatI CATG 5 cut(s) 118, 481, 883, 1149, 1254
FbaI TGATCA 2 cut(s) 417, 1050
Fnu4HI GCNGC 5 cut(s) 226, 512, 534, 1155, 1158
FokI GGATG 1 cut(s) 1254
FriOI GRGCYC 1 cut(s) 364
Fsp4HI GCNGC 5 cut(s) 226, 512, 534, 1155, 1158
FspBI CTAG 2 cut(s) 944, 1070
GluI GCNGC 5 cut(s) 226, 512, 534, 1155, 1158
HaeIII GGCC 1 cut(s) 882
HapII CCGG 3 cut(s) 236, 506, 599
HgaI GACGC 2 cut(s) 719, 977
Hin1I GRCGYC 2 cut(s) 341, 730
Hin1II CATG 5 cut(s) 122, 485, 887, 1153, 1258
HincII GTYRAC 1 cut(s) 441
HindII GTYRAC 1 cut(s) 441
HindIII AAGCTT 4 cut(s) 839, 1103, 1183, 1385
HinfI GANTC 5 cut(s) 322, 350, 546, 634, 760
HpaI GTTAAC 1 cut(s) 441
HpaII CCGG 3 cut(s) 236, 506, 599
HphI GGTGA 5 cut(s) 232, 412, 643, 1129, 1216
Hpy166II GTNNAC 1 cut(s) 441
Hpy188I TCNGA 8 cut(s) 197, 366, 432, 774, 993, 1008, 1477, 1518
Hpy188III TCNNGA 7 cut(s) 482, 599, 694, 1048, 1219, 1255, 1340
Hpy8I GTNNAC 1 cut(s) 441
Hpy99I CGWCG 1 cut(s) 591
HpyAV CCTTC 4 cut(s) 105, 118, 1003, 1433
HpyCH4III ACNGT 6 cut(s) 210, 259, 701, 865, 1289, 1468
HpyCH4IV ACGT 3 cut(s) 341, 540, 1521
HpyCH4V TGCA 7 cut(s) 206, 225, 848, 1097, 1198, 1282, 1370
HpyF10VI GCNNNNNNNGC 3 cut(s) 511, 1279, 1367
HpyF3I CTNAG 7 cut(s) 7, 447, 515, 666, 762, 792, 1476
HpySE526I ACGT 3 cut(s) 341, 540, 1521
Hsp92I GRCGYC 2 cut(s) 341, 730
Hsp92II CATG 5 cut(s) 122, 485, 887, 1153, 1258
Kpn2I TCCGGA 1 cut(s) 598
Ksp22I TGATCA 2 cut(s) 417, 1050
KspAI GTTAAC 1 cut(s) 441
Kzo9I GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
LmnI GCTCC 3 cut(s) 233, 775, 1063
Lsp1109I GCAGC 5 cut(s) 237, 523, 545, 1166, 1169
LweI GCATC 1 cut(s) 1276
MaeI CTAG 2 cut(s) 944, 1070
MaeII ACGT 3 cut(s) 341, 540, 1521
MaeIII GTNAC 4 cut(s) 238, 738, 1379, 1446
MalI GATC 6 cut(s) 419, 459, 870, 1052, 1168, 1515
MboI GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
MflI RGATCY 1 cut(s) 1166
MhlI GDGCHC 1 cut(s) 364
MlyI GAGTC 1 cut(s) 754
MmeI TCCRAC 4 cut(s) 123, 220, 262, 367
MroI TCCGGA 1 cut(s) 598
MroXI GAANNNNTTC 1 cut(s) 126
MseI TTAA 7 cut(s) 440, 657, 914, 999, 1401, 1463, 1485
MspA1I CMGCKG 3 cut(s) 514, 665, 766
MspCI CTTAAG 1 cut(s) 656
MspI CCGG 3 cut(s) 236, 506, 599
MspR9I CCNGG 2 cut(s) 507, 1408
Mva1269I GAATGC 1 cut(s) 1370
MvaI CCWGG 1 cut(s) 1408
MvnI CGCG 1 cut(s) 591
MwoI GCNNNNNNNGC 3 cut(s) 511, 1279, 1367
NciI CCSGG 1 cut(s) 507
NdeII GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
NlaIII CATG 5 cut(s) 122, 485, 887, 1153, 1258
NlaIV GGNNCC 1 cut(s) 771
NmuCI GTSAC 2 cut(s) 238, 1446
NspV TTCGAA 1 cut(s) 1028
PagI TCATGA 2 cut(s) 481, 1254
PctI GAATGC 1 cut(s) 1370
PdmI GAANNNNTTC 1 cut(s) 126
PfeI GAWTC 4 cut(s) 322, 350, 546, 634
PkrI GCNGC 5 cut(s) 227, 513, 535, 1156, 1159
PleI GAGTC 1 cut(s) 754
PpsI GAGTC 1 cut(s) 754
PsiI TTATAA 1 cut(s) 567
Psp124BI GAGCTC 1 cut(s) 364
Psp6I CCWGG 1 cut(s) 1406
PspEI GGTNACC 1 cut(s) 238
PspGI CCWGG 1 cut(s) 1406
PspN4I GGNNCC 1 cut(s) 771
PspPI GGNCC 1 cut(s) 880
PstI CTGCAG 1 cut(s) 1284
PstNI CAGNNNCTG 1 cut(s) 1279
PsuI RGATCY 1 cut(s) 1166
PvuII CAGCTG 3 cut(s) 514, 665, 766
RsaI GTAC 2 cut(s) 1286, 1319
RsaNI GTAC 2 cut(s) 1285, 1318
SacI GAGCTC 1 cut(s) 364
SaqAI TTAA 7 cut(s) 440, 657, 914, 999, 1401, 1463, 1485
SatI GCNGC 5 cut(s) 226, 512, 534, 1155, 1158
Sau3AI GATC 6 cut(s) 417, 457, 868, 1050, 1166, 1513
Sau96I GGNCC 1 cut(s) 880
ScaI AGTACT 1 cut(s) 1319
SchI GAGTC 1 cut(s) 754
ScrFI CCNGG 2 cut(s) 507, 1408
SduI GDGCHC 1 cut(s) 364
SfaNI GCATC 1 cut(s) 1276
SfcI CTRYAG 1 cut(s) 1280
SfuI TTCGAA 1 cut(s) 1028
SmlI CTYRAG 3 cut(s) 500, 656, 1219
SmoI CTYRAG 3 cut(s) 500, 656, 1219
SsiI CCGC 3 cut(s) 243, 591, 1271
SspMI CTAG 2 cut(s) 944, 1070
SstI GAGCTC 1 cut(s) 364
StyD4I CCNGG 2 cut(s) 505, 1406
StyI CCWWGG 1 cut(s) 1375
TaaI ACNGT 6 cut(s) 210, 259, 701, 865, 1289, 1468
TaiI ACGT 3 cut(s) 344, 543, 1524
TaqI TCGA 2 cut(s) 1028, 1347
TatI WGTACW 2 cut(s) 1284, 1317
TfiI GAWTC 4 cut(s) 322, 350, 546, 634
Tru1I TTAA 7 cut(s) 440, 657, 914, 999, 1401, 1463, 1485
Tru9I TTAA 7 cut(s) 440, 657, 914, 999, 1401, 1463, 1485
TscAI CASTG 3 cut(s) 796, 868, 1455
TseFI GTSAC 2 cut(s) 238, 1446
TseI GCWGC 5 cut(s) 225, 511, 533, 1154, 1157
Tsp45I GTSAC 2 cut(s) 238, 1446
TspDTI ATGAA 7 cut(s) 66, 135, 342, 825, 936, 1428, 1461
TspGWI ACGGA 4 cut(s) 49, 101, 450, 467
TspRI CASTG 3 cut(s) 796, 868, 1455
Vha464I CTTAAG 1 cut(s) 656
XapI RAATTY 2 cut(s) 433, 935
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 2 cut(s) 944, 1070
ZraI GACGTC 1 cut(s) 342
ZrmI AGTACT 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.