Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010595

Physical Location & Seq

Genomic Coordinates Reverse (-)

23978039 .. 23984283

Gene Structure 6245 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g33820.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGATCCAAAGGCAGGTGCAAAAGGCTATTGCATTTGCCAAGAAGGCTCACCATGGCCAACTGCGCAAAACCGGAGACCCTTATTTAGTCCATTGTATCCATACAGGAAGAATCTTGGCCATGTTGGTTCCTTCTAGTGGTGAAAGAGCTGTTCATACGGTTGTTGCTGGGATTCTCCATGATGTCGTTGATGACACATGTAAAAGTTTCAACCACATAGAAGAAGAGTTTGGTGATGATGTAGCCAAGCTTGTGGCCGGAGTTTCCAGGTTAAGTTACATAAACCAGCTTTTACGGAGACACCGCAGGATAAATGTGAACGATGGGAGACTTGGTCACGAGGAGGCAAATAATCTACGAGTCATGCTCTTGGGCATGGTTGATGATCCACGTGTAGTGCTTATAAAGCTTGCAGATCGTCTTCACAATATGAGAACAATCTACGCTCTGCCTCCAGAAAAAGCTCAAGCTGTTGCAAAGGAGACCTTGGTAATTTGGTGTTCTCTAGCATCCAGATTGGGTTTATGGGCTATGAAAGCTGAACTTGAAGATCTTTGCTTTGCTGTTCTTCAGCCTCAAATGTTTAAGAACATGAGAGCTGATCTAGCTTCCATGTGGAGCTCTAGCAGCAAAGTAGGAAATTCGAAAAGAATATCTGCAAGAGCAACCTTAAATGAAGGAAGTTCAGTTTTGGACAATGAAAGATCCATAGATGATGAAGATGTCACAACCATGAAGGATCTCTTGGAAGCTGTAGTACCTTTCGATGTATTGTTAGATCGGAGAAAACGGTCTAATTTTCTAAGTACTCTAGGACAAGATTTGCAGACTCATAAAATACCAAAGGTTGTGCATGATGCTGGAATTGCTTTAGCATCTCTGGTAATTTGCGAGGAGGCACTTGAGCAGGAGTTGATCATATCAACTTCTTATGTTCCAGGGATGGAAGTAACTTTATCCAGCCGTTTAAAAAGTTTGTATAGCATCTACAGCAAGATGAAACGAAAAGATGTCAGCATCAATAAAGTTTATGATGCCCGTGCATTAAGGGTAGTTGTTGGAGACAAGAATGGGACTTTGCATGGACCTGCTGTCCAATGTTGCTACAGTCTTCTCGGCACTGTGCACAAGCATTGGACGCCAATTGATGGTGAGTTTGATGATTACATTGTCAATCCAAAGCCTAGTGGCTATCAGTCTCTGCACACTGCAGTGCAAGGTCCTGACAGATCACCTTTGGAAGTTCAAATACGAACACAGAGGATGCATGAGTATGCAGAACATGGACTTGCAGCACACTGGCTTTATAAAGAAACTGGAAACAAGGTGTCTAACAGAAGTAGCACTGATGAATCTGAAATAGATGCATCATCCTTTCTCTCCAAAACTATGGAAGACCAAAATGCTACAGAAATTGATTTCTTTCGGAAGTATAGTATGTTGAAAATTGGACATCCAGTTCTTAGAGTGGATGGAAGTCATCTTCTTGCTGCAGTTGTCATTAGGGTAGAGAAGGATGGAAGGGAATTACTTGTTGCTGTGAGCTTTGGACTAGAAGCTTCTGAAGCAGTCGCTGATAGAAAATATTCTTTTCAAAAACAACGGTGGGAGGCCTATGCAAGGTTATACAAGAAGGTTTCTGATGAGTGGTGGTGTGAACCAGGACATGGGGATTGGTGCACTTGCCTAGAGAAATATACACTTTGTCGAGACGGTATATACCACAAGGAAGATCAGTTTGGGAGATTACTGCCGACATTCATTCAGGTGATTGATTTGACAGATGAAGAAGAATCTGAATATTGGGCTGTTGTTTCTGCTATCTTTGAGGGAAGACAGCTTGATTACATTACACCTACACCAAGATTTAACTCCGTTGCATCAACTTCCATGGAAACTAGCATCAATAACAAGGTGCATTTGTTAAGGACAATGCTAAGGTGGGAAGAGCAGTTACGGTCTGAAGCGAGTTATGGGTATCGACGGGGATCTGTTGTCCTTGGGGAAGTGGTGATCATATGTTGGCCGCATGGTGAAATAATGAGGTTGACAACGGGCAGCACCGCTGCAGATGCTGCTAGGAGGGTAGGACTAGACGGAAAACTGGTTTTGGTTAATGGACAGCTGGTGTTGCCTAATACAAAGCTCACAGATGGTGATGTGGTTGAAGTCAGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008728 GO:0008893 GO:0009116 GO:0009117 GO:0009119 GO:0009150 GO:0009259 GO:0009605 GO:0009987 GO:0009991 GO:0015969 GO:0016020 GO:0016740 GO:0016772 GO:0016778 GO:0016787 GO:0016788 GO:0016794 GO:0019637 GO:0019693 GO:0030312 GO:0031667 GO:0033865 GO:0033875 GO:0034032 GO:0034035 GO:0034641 GO:0042278 GO:0042578 GO:0042594 GO:0044237 GO:0044238 GO:0044281 GO:0044464 GO:0046128 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:1901068 GO:1901135 GO:1901360 GO:1901564 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

727

Amino Acids

81.7

Weight (kDa)

6.6

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD_4	PF13328	120 - 287	3.9e-44	HD domain
HD	PF01966	140 - 255	4.5e-09	HD domain
RelA_SpoT	PF04607	432 - 551	7.1e-36	Region found in RelA / SpoT proteins
DUF7589	PF24500	588 - 613	6e-07	Domain of unknown function (DUF7589)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010595)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33820 FvH4_7g33820
malus_domestica	MD07G1306500.v1.1
prunus_persica	Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1
pyrus_communis	pycom07g27950
rosa_chinensis	RchiOBHm_Chr1g0383931
rosa_laevigata	RLG00000026085
rosa_multiflora	Rmu_sc0005139.1_g000026
rosa_roxburghii	Rroxscaffold_4G00277130
rosa_rugosa	Rorug01G0443100 Rorug01G0443200 Rorug01G0443400.1 Rorug01G0443500.1
rosa_samantha	Rh1AG469100 Rh1CG439600 Rh1DG459600
rosa_wichuraiana	Rw1G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	404, 1308
AarI	CACCTGC	1 cut(s)	4
Acc16I	TGCGCA	1 cut(s)	65
Acc36I	ACCTGC	2 cut(s)	4, 1096
AccB7I	CCANNNNNTGG	2 cut(s)	1148, 1667
AciI	CCGC	3 cut(s)	304, 2027, 2064
AclWI	GGATC	4 cut(s)	380, 699, 747, 1996
AcoI	YGGCCR	4 cut(s)	55, 117, 255, 2024
AcsI	RAATTY	1 cut(s)	640
AcuI	CTGAAG	3 cut(s)	554, 1584, 1983
AcvI	CACGTG	1 cut(s)	392
AcyI	GRCGYC	1 cut(s)	1139
AfaI	GTAC	2 cut(s)	759, 808
AfiI	CCNNNNNNNGG	5 cut(s)	13, 137, 1148, 1620, 1667
AflIII	ACRYGT	2 cut(s)	197, 391
AgsI	TTSAA	6 cut(s)	211, 548, 1247, 1444, 1595, 2168
AhdI	GACNNNNNGTC	1 cut(s)	1091
AjnI	CCWGG	3 cut(s)	266, 937, 1660
AjuI	GAANNNNNNNTTGG	6 cut(s)	213, 245, 728, 760, 1722, 1754
AleI	CACNNNNGTG	1 cut(s)	1211
AloI	GAACNNNNNNTCC	2 cut(s)	1443, 1475
Alw21I	GWGCWC	3 cut(s)	623, 1128, 1682
Alw26I	GTCTC	7 cut(s)	69, 292, 322, 476, 1056, 1203, 1704
Alw44I	GTGCAC	2 cut(s)	1124, 1678
AlwI	GGATC	4 cut(s)	380, 699, 747, 1996
AlwNI	CAGNNNCTG	3 cut(s)	1201, 1574, 2075
AoxI	GGCC	5 cut(s)	55, 117, 255, 1611, 2024
ApaLI	GTGCAC	2 cut(s)	1124, 1678
ApeKI	GCWGC	6 cut(s)	627, 1292, 1490, 2058, 2066, 2075
ApoI	RAATTY	1 cut(s)	640
Asp700I	GAANNNNTTC	1 cut(s)	1585
AspLEI	GCGC	1 cut(s)	66
AspS9I	GGNCC	2 cut(s)	1085, 1220
AsuHPI	GGTGA	9 cut(s)	41, 152, 245, 1163, 1224, 1780, 2023, 2045, 2168
AsuII	TTCGAA	1 cut(s)	644
AvaII	GGWCC	2 cut(s)	1085, 1220
BaeGI	GKGCMC	2 cut(s)	1128, 1682
BalI	TGGCCA	2 cut(s)	57, 119
BanII	GRGCYC	1 cut(s)	623
BarI	GAAGNNNNNNTAC	6 cut(s)	741, 773, 1233, 1265, 1938, 1970
BauI	CACGAG	1 cut(s)	338
BbrPI	CACGTG	1 cut(s)	392
BbsI	GAAGAC	4 cut(s)	413, 1103, 1401, 1840
Bbv12I	GWGCWC	3 cut(s)	623, 1128, 1682
BbvI	GCAGC	6 cut(s)	639, 1304, 1477, 2053, 2062, 2070
BccI	CCATC	6 cut(s)	317, 937, 1142, 1466, 1511, 2147
BceAI	ACGGC	1 cut(s)	948
BciT130I	CCWGG	3 cut(s)	268, 939, 1662
BciVI	GTATCC	1 cut(s)	107
BclI	TGATCA	2 cut(s)	915, 2013
BcoDI	GTCTC	7 cut(s)	69, 292, 322, 476, 1056, 1203, 1704
BfmI	CTRYAG	7 cut(s)	753, 988, 1105, 1209, 1407, 1491, 2067
BfuAI	ACCTGC	2 cut(s)	4, 1096
BfuI	GTATCC	1 cut(s)	107
BglI	GCCNNNNNGGC	1 cut(s)	44
BglII	AGATCT	1 cut(s)	550
BisI	GCNGC	7 cut(s)	628, 1293, 1491, 2027, 2059, 2067, 2076
BlsI	GCNGC	7 cut(s)	629, 1294, 1492, 2028, 2060, 2068, 2077
BmcAI	AGTACT	1 cut(s)	808
Bme1390I	CCNGG	3 cut(s)	268, 939, 1662
Bme18I	GGWCC	2 cut(s)	1085, 1220
BmeRI	GACNNNNNGTC	1 cut(s)	1091
BmgT120I	GGNCC	2 cut(s)	1085, 1220
BmiI	GGNNCC	1 cut(s)	129
BmrFI	CCNGG	3 cut(s)	268, 939, 1662
BpiI	GAAGAC	4 cut(s)	413, 1103, 1401, 1840
BplI	GAGNNNNNCTC	2 cut(s)	351, 383
BpmI	CTGGAG	1 cut(s)	438
Bpu10I	CCTNAGC	1 cut(s)	1937
Bpu14I	TTCGAA	1 cut(s)	644
BpuEI	CTTGAG	2 cut(s)	450, 923
BsaAI	YACGTR	1 cut(s)	392
BsaHI	GRCGYC	1 cut(s)	1139
BsaI	GGTCTC	2 cut(s)	69, 476
BsaJI	CCNNGG	5 cut(s)	52, 486, 938, 1890, 1999
BsaWI	WCCGGW	1 cut(s)	71
BsaXI	ACNNNNNCTCC	2 cut(s)	319, 349
Bsc4I	CCNNNNNNNGG	5 cut(s)	13, 137, 1148, 1620, 1667
Bse1I	ACTGG	4 cut(s)	1304, 1321, 1457, 2109
BseBI	CCWGG	3 cut(s)	268, 939, 1662
BseDI	CCNNGG	5 cut(s)	52, 486, 938, 1890, 1999
BseGI	GGATG	7 cut(s)	509, 948, 1269, 1370, 1453, 1477, 1522
BseLI	CCNNNNNNNGG	5 cut(s)	13, 137, 1148, 1620, 1667
BseNI	ACTGG	4 cut(s)	1304, 1321, 1457, 2109
BseRI	GAGGAG	2 cut(s)	356, 908
BseSI	GKGCMC	2 cut(s)	1128, 1682
BseXI	GCAGC	6 cut(s)	639, 1304, 1477, 2053, 2062, 2070
BseYI	CCCAGC	1 cut(s)	167
BsgI	GTGCAG	1 cut(s)	1187
BshFI	GGCC	5 cut(s)	57, 119, 257, 1613, 2026
BsiHKAI	GWGCWC	3 cut(s)	623, 1128, 1682
BsiSI	CCGG	2 cut(s)	72, 258
BslFI	GGGAC	1 cut(s)	1087
BslI	CCNNNNNNNGG	5 cut(s)	13, 137, 1148, 1620, 1667
BsmAI	GTCTC	7 cut(s)	69, 292, 322, 476, 1056, 1203, 1704
BsmBI	CGTCTC	1 cut(s)	1704
BsmFI	GGGAC	1 cut(s)	1087
BsnI	GGCC	5 cut(s)	57, 119, 257, 1613, 2026
Bso31I	GGTCTC	2 cut(s)	69, 476
Bsp119I	TTCGAA	1 cut(s)	644
Bsp1286I	GDGCHC	3 cut(s)	623, 1128, 1682
Bsp19I	CCATGG	2 cut(s)	52, 1890
BspACI	CCGC	3 cut(s)	304, 2027, 2064
BspANI	GGCC	5 cut(s)	57, 119, 257, 1613, 2026
BspLI	GGNNCC	1 cut(s)	129
BspMAI	CTGCAG	3 cut(s)	1213, 1495, 2071
BspMI	ACCTGC	2 cut(s)	4, 1096
BspPI	GGATC	4 cut(s)	380, 699, 747, 1996
BspQI	GCTCTTC	1 cut(s)	1941
BspT104I	TTCGAA	1 cut(s)	644
BspTNI	GGTCTC	2 cut(s)	69, 476
BsrI	ACTGG	4 cut(s)	1304, 1321, 1457, 2109
BssECI	CCNNGG	5 cut(s)	52, 486, 938, 1890, 1999
BssNI	GRCGYC	1 cut(s)	1139
BssSI	CACGAG	1 cut(s)	338
BssT1I	CCWWGG	4 cut(s)	52, 486, 1890, 1999
Bst2BI	CACGAG	1 cut(s)	338
Bst2UI	CCWGG	3 cut(s)	268, 939, 1662
Bst4CI	ACNGT	7 cut(s)	160, 792, 1109, 1123, 1605, 1715, 1959
Bst6I	CTCTTC	2 cut(s)	219, 1941
BstACI	GRCGYC	1 cut(s)	1139
BstAPI	GCANNNNNTGC	1 cut(s)	2075
BstBAI	YACGTR	1 cut(s)	392
BstBI	TTCGAA	1 cut(s)	644
BstC8I	GCNNGC	1 cut(s)	411
BstDEI	CTNAG	3 cut(s)	803, 1463, 1937
BstDSI	CCRYGG	2 cut(s)	52, 1890
BstENI	CCTNNNNNAGG	1 cut(s)	1618
BstF5I	GGATG	7 cut(s)	509, 948, 1269, 1370, 1453, 1477, 1522
BstHHI	GCGC	1 cut(s)	66
BstMAI	GTCTC	7 cut(s)	69, 292, 322, 476, 1056, 1203, 1704
BstNI	CCWGG	3 cut(s)	268, 939, 1662
BstNSI	RCATGY	1 cut(s)	201
BstSCI	CCNGG	3 cut(s)	266, 937, 1660
BstSFI	CTRYAG	7 cut(s)	753, 988, 1105, 1209, 1407, 1491, 2067
BstSLI	GKGCMC	2 cut(s)	1128, 1682
BstV1I	GCAGC	6 cut(s)	639, 1304, 1477, 2053, 2062, 2070
BstV2I	GAAGAC	4 cut(s)	413, 1103, 1401, 1840
BstX2I	RGATCY	4 cut(s)	550, 704, 739, 1988
BstXI	CCANNNNNNTGG	2 cut(s)	253, 1390
BstYI	RGATCY	4 cut(s)	550, 704, 739, 1988
BsuI	GTATCC	1 cut(s)	107
BsuRI	GGCC	5 cut(s)	57, 119, 257, 1613, 2026
BtgI	CCRYGG	2 cut(s)	52, 1890
BtsCI	GGATG	7 cut(s)	509, 948, 1269, 1370, 1453, 1477, 1522
BtsI	GCAGTG	2 cut(s)	1206, 1218
BtsIMutI	CAGTG	5 cut(s)	1119, 1206, 1218, 1297, 1344
BveI	ACCTGC	2 cut(s)	4, 1096
Cac8I	GCNNGC	1 cut(s)	411
CaiI	CAGNNNCTG	3 cut(s)	1201, 1574, 2075
CfoI	GCGC	1 cut(s)	66
Cfr13I	GGNCC	2 cut(s)	1085, 1220
CseI	GACGC	1 cut(s)	1147
Csp6I	GTAC	2 cut(s)	758, 807
CviQI	GTAC	2 cut(s)	758, 807
DdeI	CTNAG	3 cut(s)	803, 1463, 1937
DraI	TTTAAA	1 cut(s)	969
DriI	GACNNNNNGTC	1 cut(s)	1091
EaeI	YGGCCR	4 cut(s)	55, 117, 255, 2024
Eam1104I	CTCTTC	2 cut(s)	219, 1941
Eam1105I	GACNNNNNGTC	1 cut(s)	1091
EarI	CTCTTC	2 cut(s)	219, 1941
Ecl136II	GAGCTC	1 cut(s)	621
Eco130I	CCWWGG	4 cut(s)	52, 486, 1890, 1999
Eco147I	AGGCCT	1 cut(s)	1613
Eco24I	GRGCYC	1 cut(s)	623
Eco31I	GGTCTC	2 cut(s)	69, 476
Eco47I	GGWCC	2 cut(s)	1085, 1220
Eco53kI	GAGCTC	1 cut(s)	621
Eco57I	CTGAAG	3 cut(s)	554, 1584, 1983
Eco72I	CACGTG	1 cut(s)	392
EcoICRI	GAGCTC	1 cut(s)	621
EcoNI	CCTNNNNNAGG	1 cut(s)	1618
EcoO109I	RGGNCCY	1 cut(s)	1220
EcoRII	CCWGG	3 cut(s)	266, 937, 1660
EcoT14I	CCWWGG	4 cut(s)	52, 486, 1890, 1999
EcoT22I	ATGCAT	2 cut(s)	1269, 1369
EcoT38I	GRGCYC	1 cut(s)	623
ErhI	CCWWGG	4 cut(s)	52, 486, 1890, 1999
Esp3I	CGTCTC	1 cut(s)	1704
FalI	AAGNNNNNCTT	6 cut(s)	470, 502, 528, 560, 728, 760
FaqI	GGGAC	1 cut(s)	1087
FauNDI	CATATG	1 cut(s)	2018
FbaI	TGATCA	2 cut(s)	915, 2013
Fnu4HI	GCNGC	7 cut(s)	628, 1293, 1491, 2027, 2059, 2067, 2076
FokI	GGATG	7 cut(s)	496, 955, 1276, 1357, 1440, 1484, 1529
FriOI	GRGCYC	1 cut(s)	623
Fsp4HI	GCNGC	7 cut(s)	628, 1293, 1491, 2027, 2059, 2067, 2076
FspI	TGCGCA	1 cut(s)	65
GlaI	GCGC	1 cut(s)	65
GluI	GCNGC	7 cut(s)	628, 1293, 1491, 2027, 2059, 2067, 2076
GsaI	CCCAGC	1 cut(s)	171
GsuI	CTGGAG	1 cut(s)	438
HaeIII	GGCC	5 cut(s)	57, 119, 257, 1613, 2026
HapII	CCGG	2 cut(s)	72, 258
HgaI	GACGC	1 cut(s)	1147
HhaI	GCGC	1 cut(s)	66
Hin1I	GRCGYC	1 cut(s)	1139
Hin6I	GCGC	1 cut(s)	64
HinP1I	GCGC	1 cut(s)	64
HincII	GTYRAC	1 cut(s)	2049
HindII	GTYRAC	1 cut(s)	2049
HindIII	AAGCTT	3 cut(s)	248, 407, 1557
HinfI	GANTC	6 cut(s)	111, 172, 360, 829, 1352, 1793
HpaII	CCGG	2 cut(s)	72, 258
HphI	GGTGA	9 cut(s)	41, 152, 245, 1163, 1224, 1780, 2023, 2045, 2168
Hpy166II	GTNNAC	5 cut(s)	319, 1126, 1658, 1680, 2049
Hpy188I	TCNGA	8 cut(s)	783, 1357, 1428, 1564, 1642, 1798, 1963, 2174
Hpy188III	TCNNGA	5 cut(s)	338, 455, 513, 1223, 1709
Hpy8I	GTNNAC	5 cut(s)	319, 1126, 1658, 1680, 2049
Hpy99I	CGWCG	1 cut(s)	1986
HpyAV	CCTTC	7 cut(s)	37, 141, 671, 730, 1507, 1515, 1627
HpyCH4III	ACNGT	7 cut(s)	160, 792, 1109, 1123, 1605, 1715, 1959
HpyCH4IV	ACGT	1 cut(s)	391
HpyF3I	CTNAG	3 cut(s)	803, 1463, 1937
HpySE526I	ACGT	1 cut(s)	391
Hsp92I	GRCGYC	1 cut(s)	1139
HspAI	GCGC	1 cut(s)	64
Ksp22I	TGATCA	2 cut(s)	915, 2013
LguI	GCTCTTC	1 cut(s)	1941
LmnI	GCTCC	1 cut(s)	618
Lsp1109I	GCAGC	6 cut(s)	639, 1304, 1477, 2053, 2062, 2070
MaeII	ACGT	1 cut(s)	391
MaeIII	GTNAC	5 cut(s)	275, 335, 724, 949, 1953
MfeI	CAATTG	1 cut(s)	1143
MflI	RGATCY	4 cut(s)	550, 704, 739, 1988
MhlI	GDGCHC	3 cut(s)	623, 1128, 1682
MlsI	TGGCCA	2 cut(s)	57, 119
MluCI	AATT	9 cut(s)	492, 640, 796, 864, 885, 1143, 1413, 1446, 1526
MluNI	TGGCCA	2 cut(s)	57, 119
MlyI	GAGTC	2 cut(s)	369, 823
MmeI	TCCRAC	1 cut(s)	1039
Mox20I	TGGCCA	2 cut(s)	57, 119
Mph1103I	ATGCAT	2 cut(s)	1269, 1369
MroXI	GAANNNNTTC	1 cut(s)	1585
MscI	TGGCCA	2 cut(s)	57, 119
MseI	TTAA	8 cut(s)	272, 585, 671, 968, 1046, 1869, 1925, 2115
MslI	CAYNNNNRTG	4 cut(s)	731, 1211, 1272, 1766
Msp20I	TGGCCA	2 cut(s)	57, 119
MspA1I	CMGCKG	2 cut(s)	2066, 2125
MspI	CCGG	2 cut(s)	72, 258
MspR9I	CCNGG	3 cut(s)	268, 939, 1662
MunI	CAATTG	1 cut(s)	1143
MvaI	CCWGG	3 cut(s)	268, 939, 1662
NcoI	CCATGG	2 cut(s)	52, 1890
NdeI	CATATG	1 cut(s)	2018
NlaIV	GGNNCC	1 cut(s)	129
NmeAIII	GCCGAG	1 cut(s)	1095
NmuCI	GTSAC	2 cut(s)	335, 724
NsbI	TGCGCA	1 cut(s)	65
NsiI	ATGCAT	2 cut(s)	1269, 1369
NspI	RCATGY	1 cut(s)	201
NspV	TTCGAA	1 cut(s)	644
OliI	CACNNNNGTG	1 cut(s)	1211
PaqCI	CACCTGC	1 cut(s)	4
PceI	AGGCCT	1 cut(s)	1613
PciI	ACATGT	1 cut(s)	197
PciSI	GCTCTTC	1 cut(s)	1941
PdmI	GAANNNNTTC	1 cut(s)	1585
PfeI	GAWTC	4 cut(s)	111, 172, 1352, 1793
PflFI	GACNNNGTC	1 cut(s)	333
PflMI	CCANNNNNTGG	2 cut(s)	1148, 1667
PkrI	GCNGC	7 cut(s)	629, 1294, 1492, 2028, 2060, 2068, 2077
PleI	GAGTC	2 cut(s)	368, 823
PmaCI	CACGTG	1 cut(s)	392
PmlI	CACGTG	1 cut(s)	392
PpsI	GAGTC	2 cut(s)	368, 823
Ppu21I	YACGTR	1 cut(s)	392
PpuMI	RGGWCCY	1 cut(s)	1220
PscI	ACATGT	1 cut(s)	197
PsiI	TTATAA	2 cut(s)	404, 1308
Psp124BI	GAGCTC	1 cut(s)	623
Psp5II	RGGWCCY	1 cut(s)	1220
Psp6I	CCWGG	3 cut(s)	266, 937, 1660
PspCI	CACGTG	1 cut(s)	392
PspFI	CCCAGC	1 cut(s)	167
PspGI	CCWGG	3 cut(s)	266, 937, 1660
PspN4I	GGNNCC	1 cut(s)	129
PspPI	GGNCC	2 cut(s)	1085, 1220
PspPPI	RGGWCCY	1 cut(s)	1220
PstI	CTGCAG	3 cut(s)	1213, 1495, 2071
PstNI	CAGNNNCTG	3 cut(s)	1201, 1574, 2075
PsuI	RGATCY	4 cut(s)	550, 704, 739, 1988
PsyI	GACNNNGTC	1 cut(s)	333
PvuII	CAGCTG	1 cut(s)	2125
RsaI	GTAC	2 cut(s)	759, 808
RsaNI	GTAC	2 cut(s)	758, 807
RseI	CAYNNNNRTG	4 cut(s)	731, 1211, 1272, 1766
SacI	GAGCTC	1 cut(s)	623
SapI	GCTCTTC	1 cut(s)	1941
SaqAI	TTAA	8 cut(s)	272, 585, 671, 968, 1046, 1869, 1925, 2115
SatI	GCNGC	7 cut(s)	628, 1293, 1491, 2027, 2059, 2067, 2076
Sau96I	GGNCC	2 cut(s)	1085, 1220
ScaI	AGTACT	1 cut(s)	808
SchI	GAGTC	2 cut(s)	369, 823
ScrFI	CCNGG	3 cut(s)	268, 939, 1662
SduI	GDGCHC	3 cut(s)	623, 1128, 1682
SfcI	CTRYAG	7 cut(s)	753, 988, 1105, 1209, 1407, 1491, 2067
SfuI	TTCGAA	1 cut(s)	644
SinI	GGWCC	2 cut(s)	1085, 1220
SmiMI	CAYNNNNRTG	4 cut(s)	731, 1211, 1272, 1766
SmlI	CTYRAG	2 cut(s)	465, 902
SmoI	CTYRAG	2 cut(s)	465, 902
Sse9I	AATT	9 cut(s)	492, 640, 796, 864, 885, 1143, 1413, 1446, 1526
SseBI	AGGCCT	1 cut(s)	1613
SsiI	CCGC	3 cut(s)	304, 2027, 2064
SspI	AATATT	2 cut(s)	1586, 1802
SstI	GAGCTC	1 cut(s)	623
StuI	AGGCCT	1 cut(s)	1613
StyD4I	CCNGG	3 cut(s)	266, 937, 1660
StyI	CCWWGG	4 cut(s)	52, 486, 1890, 1999
TaaI	ACNGT	7 cut(s)	160, 792, 1109, 1123, 1605, 1715, 1959
TaiI	ACGT	1 cut(s)	394
TaqI	TCGA	4 cut(s)	644, 765, 1708, 1981
TasI	AATT	9 cut(s)	492, 640, 796, 864, 885, 1143, 1413, 1446, 1526
TatI	WGTACW	1 cut(s)	806
TauI	GCSGC	1 cut(s)	2029
TfiI	GAWTC	4 cut(s)	111, 172, 1352, 1793
Tru1I	TTAA	8 cut(s)	272, 585, 671, 968, 1046, 1869, 1925, 2115
Tru9I	TTAA	8 cut(s)	272, 585, 671, 968, 1046, 1869, 1925, 2115
TscAI	CASTG	5 cut(s)	1126, 1213, 1218, 1304, 1351
TseFI	GTSAC	2 cut(s)	335, 724
TseI	GCWGC	6 cut(s)	627, 1292, 1490, 2058, 2066, 2075
Tsp45I	GTSAC	2 cut(s)	335, 724
TspGWI	ACGGA	3 cut(s)	310, 1864, 2112
TspRI	CASTG	5 cut(s)	1126, 1213, 1218, 1304, 1351
Tth111I	GACNNNGTC	1 cut(s)	333
Van91I	CCANNNNNTGG	2 cut(s)	1148, 1667
VneI	GTGCAC	2 cut(s)	1124, 1678
VpaK11BI	GGWCC	2 cut(s)	1085, 1220
XagI	CCTNNNNNAGG	1 cut(s)	1618
XapI	RAATTY	1 cut(s)	640
XceI	RCATGY	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	1585
ZrmI	AGTACT	1 cut(s)	808
Zsp2I	ATGCAT	2 cut(s)	1269, 1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.