Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010595

Physical Location & Seq

Genomic Coordinates Reverse (-)

68044976 .. 68051316

Gene Structure 6341 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ60681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

ATGCCCTCAGCCTCATGCCAAACCTCAACCTCAACCTCCGCAATGTTCGTCCACAACTTCCACCGTCTCAGCCTCCGCAACTCCCCCAAATTCCGATGCGTCTTGGACCAGATTGCCCCCAACTTGGCCGTCTCCTCCTCCCTCAGCTCCGTCTTCACCTCTGCCAACCTCGTCGCCGCCGCCGCCGCCGCCTCCGGCTCCGGCTCTCTCCACAGCGCCGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCGCCATCGCCTCCGGGGCTTGTCTCTCCACTAAAGTTGATTTCTTGTGGCCCAAACTCGAAACGCCGCCAGGCTGTGATATAGTGGAGGGAGTAGACGTGACTGGATATCCTGTATTCAGTGATCCAAAGGTGCAAAAAGCTATTGCATTTGCCAAGAAGGCTCACCATGGCCAACTACGCAAGACGGGAGACCCTTATTTAGTCCATTGCATCCATACGGGAAGAATCTTGGCCATGTTGGTTCCTTCAAGTGGCGAACGAGCTGTTCAGACGGTTGTTGCTGGGATTCTCCACGATGTCGTTGATGACACGTGCGAAAGTTTCAACCGCATAGAACAAGAATTTGGCGATGATGTAGCCAAGCTCGTAGCTGGAGTTTCCAGGTTAAGTTACATAAACCAGCTTTTGCGGAGACACCGCAGGATAAATGTGAATGACGGGAGACTTGGTCACGAGGAGGCAAATAACTTACGAGTCATGCTCTTGGGCATGGTTGATGATCCACGTGTAGTGCTTATAAAGCTTGCAGATCGTCTTCACAATATGAGAACAATTTACGCTCTGCCTCCGGCAAAAGCTCAAGCTGTTGCTAGGGAGACCTTGGTGATTTGGTGTTCCCTAGCATCCAGATTGGGTTTGTGGGCTATGAAAGCTGAACTGGAAGATCTGTGCTTTGCTGTTCTTCAGCCTCAAATGTTTAAGAACATGAGAGCTGATCTAGCTTCCATGTGGAGCTCTAGCAGCAAAGTAGGAAATTTGAAAAGAATATCTGCAAGATCCGCCTTAAATGGAGGATGCTCAGTTTCGGACAATGAAGGATCCATCAATGATGAAGATGTCACAACCATGAAGGATCTCTTGGAAGCCGTAGTACCTTTCGATGTATTGTTAGATCGGAGAAAACGGTCTAATTTTCTAAGTACTCTAGGACAAGATTTGGAGACTCATAAAAGACCAAAGGTTGTGCATGATGCTGGAATTGCTTTAGCATCTCTGGTAATTTGTGAGGAGGCACTTGAGCAGGAGTTGATCATATCAACTTCTTATGTTCCAGGGATGGAAGTAACTTTATCCAGCCGTTTAAAAAGTTTGTATAGCATCTACAGCAAGATGAAACGAAAAGATGTCAGCATCAATAAAGTTTATGATGCCCGTGCATTAAGGGTAGTTGTTGGAGACAAGAATGGAACTTTGCATGGACCTGCTGTCCAATGTTGCTACAGTCTTCTCGACACTGTGCACAAGCATTGGACACCAATTGATGGTGAGTTTGATGATTACATTGTCAATCCAAAGCCTAGTGGCTATCAGTCTCTGCACACTGCAGTACAAGGTCCTGACAAATCACCTTTGGAAGTTCAAATACGAACGCAGAGGATGCACGAGTATGCAGAACATGGACTTGCAGCACACTGGCTTTATAAAGAGACTGGAAACAAGCTGTCTAACAGAAGCAGCACTGATGAATCTGAAATAGATGCAACATCCTTTATCTCCAAAACTATGGACGACCAAAATGATAGAGAAATTGATTTCTTTCAGAAGCATAGTATGTTGAAAATTGGGCATCCAGTTCTTAGAGTGGATGGAAGTCATCTTCTTGCTGCAGTTGTCATTAGGGTAGAGAAGGATGGAAGGGAATTACTCGTTGCCGTGAGCTTTGCACTAGAAGCTTCAGAAGCAGTCGCTGATAGAAAATATTCTTTTCAAAAACAACGGTGGGAAGCCTATGCAAGGTTATATAAGAAGGTTTCTGATGAATGGTGGTGTGAACCAGGACATGGGGATTGGTGCACTTGCCTAGAGAAATATACACTTTGTCGGGATGGTATGTACCACAAGGAAGATCAGTTTGGGAGATTACTGCCGACATTCATTCAGGTGATTGATTTGACAGATGAAGAAGAATCTGAATATTGGGCTGTTGTTTCTGCTATCTTTGAGGGAAGACAGCTTGATTACATTACACCTACACCAAGATTTAACTCAGTTACATCAACTTCCGTGGAAACTAGCATCAATAACAAGGTGCATTTGCTAAGGACAATGCTACGGTGGGAAGAGCAATTACGGTCTGAAGCAATTTATGGAAATGGACAAGCCATGTATCGACGGGGTTCTGTTGTCCTTGGGGAAGTGGTGATTATATGTTGGCCGCATGGCGAAATAATGAGGTTGACAACAGGCAGCACCGCCGCAGATGCTGCTAGAAGGAAAGGACTGGACGGAAAACTGGTTTTGGTTAATGGTCAGCTGGTGTTGCCCAATACAAAGCTCACAGATGGTGATGTGGTTGAAGTCAGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008728 GO:0008893 GO:0009116 GO:0009117 GO:0009119 GO:0009150 GO:0009259 GO:0009605 GO:0009987 GO:0009991 GO:0015969 GO:0016020 GO:0016740 GO:0016772 GO:0016778 GO:0016787 GO:0016788 GO:0016794 GO:0019637 GO:0019693 GO:0030312 GO:0031667 GO:0033865 GO:0033875 GO:0034032 GO:0034035 GO:0034641 GO:0042278 GO:0042578 GO:0042594 GO:0044237 GO:0044238 GO:0044281 GO:0044464 GO:0046128 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:1901068 GO:1901135 GO:1901360 GO:1901564 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

855

Amino Acids

94.79

Weight (kDa)

6.63

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD_4	PF13328	133 - 300	7.4e-44	HD domain
HD	PF01966	153 - 268	4.4e-09	HD domain
RelA_SpoT	PF04607	445 - 564	9.6e-36	Region found in RelA / SpoT proteins
DUF7589	PF24500	600 - 735	1.4e-74	Domain of unknown function (DUF7589)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010595)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33820 FvH4_7g33820
malus_domestica	MD07G1306500.v1.1
prunus_persica	Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1
pyrus_communis	pycom07g27950
rosa_chinensis	RchiOBHm_Chr1g0383931
rosa_laevigata	RLG00000026085
rosa_multiflora	Rmu_sc0005139.1_g000026
rosa_roxburghii	Rroxscaffold_4G00277130
rosa_rugosa	Rorug01G0443100 Rorug01G0443200 Rorug01G0443400.1 Rorug01G0443500.1
rosa_samantha	Rh1AG469100 Rh1CG439600 Rh1DG459600
rosa_wichuraiana	Rw1G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	776, 1680
Acc36I	ACCTGC	1 cut(s)	1468
AccB7I	CCANNNNNTGG	2 cut(s)	1520, 2039
AccI	GTMKAC	1 cut(s)	351
AclWI	GGATC	6 cut(s)	374, 752, 1029, 1071, 1084, 1119
AcoI	YGGCCR	4 cut(s)	126, 427, 489, 2411
AcsI	RAATTY	3 cut(s)	89, 599, 1012
AcuI	CTGAAG	3 cut(s)	926, 1917, 2355
AcvI	CACGTG	2 cut(s)	570, 764
AfaI	GTAC	4 cut(s)	1131, 1180, 1587, 2093
AfiI	CCNNNNNNNGG	5 cut(s)	124, 509, 1520, 1992, 2039
AflIII	ACRYGT	2 cut(s)	567, 763
AgsI	TTSAA	7 cut(s)	507, 583, 1018, 1619, 1816, 1967, 2555
AhdI	GACNNNNNGTC	1 cut(s)	1463
AjiI	CACGTC	1 cut(s)	355
AjnI	CCWGG	4 cut(s)	325, 638, 1309, 2032
AjuI	GAANNNNNNNTTGG	6 cut(s)	585, 617, 1100, 1132, 2094, 2126
Alw21I	GWGCWC	3 cut(s)	995, 1500, 2054
Alw44I	GTGCAC	2 cut(s)	1496, 2050
AlwI	GGATC	6 cut(s)	374, 752, 1029, 1071, 1084, 1119
AlwNI	CAGNNNCTG	3 cut(s)	1573, 1946, 2462
AoxI	GGCC	5 cut(s)	126, 305, 427, 489, 2411
ApaLI	GTGCAC	2 cut(s)	1496, 2050
ApeKI	GCWGC	6 cut(s)	999, 1664, 1713, 1862, 2445, 2462
ApoI	RAATTY	3 cut(s)	89, 599, 1012
Asp700I	GAANNNNTTC	1 cut(s)	1957
AspLEI	GCGC	1 cut(s)	218
AspS9I	GGNCC	4 cut(s)	106, 306, 1457, 1592
AsuC2I	CCSGG	1 cut(s)	271
AvaII	GGWCC	3 cut(s)	106, 1457, 1592
BaeGI	GKGCMC	2 cut(s)	1500, 2054
BalI	TGGCCA	2 cut(s)	429, 491
BamHI	GGATCC	1 cut(s)	1076
BanII	GRGCYC	1 cut(s)	995
BarI	GAAGNNNNNNTAC	6 cut(s)	1113, 1145, 1605, 1637, 2310, 2342
BauI	CACGAG	2 cut(s)	710, 1640
BbrPI	CACGTG	2 cut(s)	570, 764
BbsI	GAAGAC	4 cut(s)	145, 785, 1475, 2212
Bbv12I	GWGCWC	3 cut(s)	995, 1500, 2054
BbvCI	CCTCAGC	2 cut(s)	7, 143
BbvI	GCAGC	6 cut(s)	1011, 1676, 1725, 1849, 2449, 2457
BccI	CCATC	9 cut(s)	239, 269, 1088, 1309, 1514, 1838, 1883, 2078, 2534
BceAI	ACGGC	6 cut(s)	113, 203, 239, 1109, 1320, 1895
BciT130I	CCWGG	4 cut(s)	327, 640, 1311, 2034
BclI	TGATCA	1 cut(s)	1287
BcnI	CCSGG	1 cut(s)	271
BfmI	CTRYAG	4 cut(s)	1360, 1477, 1581, 1863
BfoI	RGCGCY	1 cut(s)	219
BfuAI	ACCTGC	1 cut(s)	1468
BglI	GCCNNNNNGGC	2 cut(s)	272, 416
BglII	AGATCT	1 cut(s)	922
BmcAI	AGTACT	1 cut(s)	1180
Bme1390I	CCNGG	5 cut(s)	271, 327, 640, 1311, 2034
Bme18I	GGWCC	3 cut(s)	106, 1457, 1592
BmeRI	GACNNNNNGTC	1 cut(s)	1463
BmgBI	CACGTC	1 cut(s)	355
BmgT120I	GGNCC	4 cut(s)	106, 306, 1457, 1592
BmiI	GGNNCC	3 cut(s)	199, 501, 1078
BmrFI	CCNGG	5 cut(s)	271, 327, 640, 1311, 2034
BpiI	GAAGAC	4 cut(s)	145, 785, 1475, 2212
BplI	GAGNNNNNCTC	2 cut(s)	723, 755
BpmI	CTGGAG	1 cut(s)	651
Bpu10I	CCTNAGC	3 cut(s)	7, 143, 2297
BpuEI	CTTGAG	3 cut(s)	222, 822, 1295
BpuMI	CCSGG	1 cut(s)	271
BsaAI	YACGTR	2 cut(s)	570, 764
BsaI	GGTCTC	2 cut(s)	441, 848
BsaJI	CCNNGG	6 cut(s)	270, 424, 858, 1310, 2262, 2386
BsaXI	ACNNNNNCTCC	4 cut(s)	339, 369, 691, 721
Bsc4I	CCNNNNNNNGG	5 cut(s)	124, 509, 1520, 1992, 2039
Bse1I	ACTGG	7 cut(s)	364, 921, 1676, 1693, 1829, 2484, 2496
Bse3DI	GCAATG	2 cut(s)	48, 463
BseBI	CCWGG	4 cut(s)	327, 640, 1311, 2034
BseDI	CCNNGG	6 cut(s)	270, 424, 858, 1310, 2262, 2386
BseLI	CCNNNNNNNGG	5 cut(s)	124, 509, 1520, 1992, 2039
BseMI	GCAATG	2 cut(s)	48, 463
BseMII	CTCAG	5 cut(s)	21, 82, 157, 1071, 2259
BseNI	ACTGG	7 cut(s)	364, 921, 1676, 1693, 1829, 2484, 2496
BseRI	GAGGAG	4 cut(s)	124, 127, 728, 1280
BseSI	GKGCMC	2 cut(s)	1500, 2054
BseXI	GCAGC	6 cut(s)	1011, 1676, 1725, 1849, 2449, 2457
BseYI	CCCAGC	1 cut(s)	539
BsgI	GTGCAG	1 cut(s)	1559
BshFI	GGCC	5 cut(s)	128, 307, 429, 491, 2413
BsiHKAI	GWGCWC	3 cut(s)	995, 1500, 2054
BsiSI	CCGG	4 cut(s)	195, 201, 270, 827
BslI	CCNNNNNNNGG	5 cut(s)	124, 509, 1520, 1992, 2039
BsmBI	CGTCTC	2 cut(s)	71, 136
BsnI	GGCC	5 cut(s)	128, 307, 429, 491, 2413
Bso31I	GGTCTC	2 cut(s)	441, 848
Bsp1286I	GDGCHC	3 cut(s)	995, 1500, 2054
Bsp19I	CCATGG	1 cut(s)	424
BspANI	GGCC	5 cut(s)	128, 307, 429, 491, 2413
BspCNI	CTCAG	5 cut(s)	20, 81, 156, 1070, 2258
BspLI	GGNNCC	3 cut(s)	199, 501, 1078
BspMAI	CTGCAG	2 cut(s)	1585, 1867
BspMI	ACCTGC	1 cut(s)	1468
BspPI	GGATC	6 cut(s)	374, 752, 1029, 1071, 1084, 1119
BspQI	GCTCTTC	1 cut(s)	2313
BspTNI	GGTCTC	2 cut(s)	441, 848
BsrDI	GCAATG	2 cut(s)	48, 463
BsrI	ACTGG	7 cut(s)	364, 921, 1676, 1693, 1829, 2484, 2496
BssECI	CCNNGG	6 cut(s)	270, 424, 858, 1310, 2262, 2386
BssSI	CACGAG	2 cut(s)	710, 1640
BssT1I	CCWWGG	3 cut(s)	424, 858, 2386
Bst2BI	CACGAG	2 cut(s)	710, 1640
Bst2UI	CCWGG	4 cut(s)	327, 640, 1311, 2034
Bst4CI	ACNGT	8 cut(s)	65, 532, 1164, 1481, 1495, 1977, 2313, 2331
Bst6I	CTCTTC	1 cut(s)	2313
BstAPI	GCANNNNNTGC	2 cut(s)	1636, 2462
BstBAI	YACGTR	2 cut(s)	570, 764
BstC8I	GCNNGC	1 cut(s)	783
BstDEI	CTNAG	8 cut(s)	7, 68, 143, 1057, 1175, 1835, 2245, 2297
BstDSI	CCRYGG	2 cut(s)	424, 2262
BstENI	CCTNNNNNAGG	1 cut(s)	1990
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	1 cut(s)	218
BstNI	CCWGG	4 cut(s)	327, 640, 1311, 2034
BstSCI	CCNGG	5 cut(s)	269, 325, 638, 1309, 2032
BstSFI	CTRYAG	4 cut(s)	1360, 1477, 1581, 1863
BstSLI	GKGCMC	2 cut(s)	1500, 2054
BstV1I	GCAGC	6 cut(s)	1011, 1676, 1725, 1849, 2449, 2457
BstV2I	GAAGAC	4 cut(s)	145, 785, 1475, 2212
BstX2I	RGATCY	4 cut(s)	922, 1034, 1076, 1111
BstXI	CCANNNNNNTGG	1 cut(s)	1762
BstYI	RGATCY	4 cut(s)	922, 1034, 1076, 1111
BsuRI	GGCC	5 cut(s)	128, 307, 429, 491, 2413
BtgI	CCRYGG	2 cut(s)	424, 2262
BtgZI	GCGATG	2 cut(s)	247, 621
BtrI	CACGTC	1 cut(s)	355
BtsI	GCAGTG	1 cut(s)	1578
BtsIMutI	CAGTG	5 cut(s)	382, 1491, 1578, 1669, 1716
BveI	ACCTGC	1 cut(s)	1468
Cac8I	GCNNGC	1 cut(s)	783
CaiI	CAGNNNCTG	3 cut(s)	1573, 1946, 2462
CfoI	GCGC	1 cut(s)	218
Cfr13I	GGNCC	4 cut(s)	106, 306, 1457, 1592
CseI	GACGC	1 cut(s)	88
Csp6I	GTAC	4 cut(s)	1130, 1179, 1586, 2092
CspCI	CAANNNNNGTGG	4 cut(s)	274, 309, 2244, 2279
CviQI	GTAC	4 cut(s)	1130, 1179, 1586, 2092
DdeI	CTNAG	8 cut(s)	7, 68, 143, 1057, 1175, 1835, 2245, 2297
DraI	TTTAAA	1 cut(s)	1341
DriI	GACNNNNNGTC	1 cut(s)	1463
EaeI	YGGCCR	4 cut(s)	126, 427, 489, 2411
Eam1104I	CTCTTC	1 cut(s)	2313
Eam1105I	GACNNNNNGTC	1 cut(s)	1463
EarI	CTCTTC	1 cut(s)	2313
EciI	GGCGGA	1 cut(s)	1027
Ecl136II	GAGCTC	1 cut(s)	993
Eco130I	CCWWGG	3 cut(s)	424, 858, 2386
Eco24I	GRGCYC	1 cut(s)	995
Eco31I	GGTCTC	2 cut(s)	441, 848
Eco32I	GATATC	1 cut(s)	365
Eco47I	GGWCC	3 cut(s)	106, 1457, 1592
Eco53kI	GAGCTC	1 cut(s)	993
Eco57I	CTGAAG	3 cut(s)	926, 1917, 2355
Eco72I	CACGTG	2 cut(s)	570, 764
EcoICRI	GAGCTC	1 cut(s)	993
EcoNI	CCTNNNNNAGG	1 cut(s)	1990
EcoO109I	RGGNCCY	1 cut(s)	1592
EcoRII	CCWGG	4 cut(s)	325, 638, 1309, 2032
EcoRV	GATATC	1 cut(s)	365
EcoT14I	CCWWGG	3 cut(s)	424, 858, 2386
EcoT38I	GRGCYC	1 cut(s)	995
ErhI	CCWWGG	3 cut(s)	424, 858, 2386
Esp3I	CGTCTC	2 cut(s)	71, 136
FalI	AAGNNNNNCTT	2 cut(s)	1100, 1132
FbaI	TGATCA	1 cut(s)	1287
FblI	GTMKAC	1 cut(s)	351
FriOI	GRGCYC	1 cut(s)	995
GlaI	GCGC	1 cut(s)	217
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	1 cut(s)	651
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	5 cut(s)	128, 307, 429, 491, 2413
HapII	CCGG	4 cut(s)	195, 201, 270, 827
HgaI	GACGC	1 cut(s)	88
HhaI	GCGC	1 cut(s)	218
Hin6I	GCGC	1 cut(s)	216
HinP1I	GCGC	1 cut(s)	216
HincII	GTYRAC	1 cut(s)	2436
HindII	GTYRAC	1 cut(s)	2436
HindIII	AAGCTT	2 cut(s)	779, 1929
HinfI	GANTC	6 cut(s)	483, 544, 732, 1201, 1724, 2165
HpaII	CCGG	4 cut(s)	195, 201, 270, 827
Hpy166II	GTNNAC	6 cut(s)	52, 352, 1498, 2030, 2052, 2436
Hpy188III	TCNNGA	5 cut(s)	710, 885, 1487, 1595, 2081
Hpy8I	GTNNAC	6 cut(s)	52, 352, 1498, 2030, 2052, 2436
Hpy99I	CGWCG	3 cut(s)	176, 260, 2373
HpyAV	CCTTC	8 cut(s)	409, 513, 1067, 1102, 1879, 1887, 1999, 2463
HpyCH4III	ACNGT	8 cut(s)	65, 532, 1164, 1481, 1495, 1977, 2313, 2331
HpyCH4IV	ACGT	3 cut(s)	354, 569, 763
HpyF3I	CTNAG	8 cut(s)	7, 68, 143, 1057, 1175, 1835, 2245, 2297
HpySE526I	ACGT	3 cut(s)	354, 569, 763
HspAI	GCGC	1 cut(s)	216
Ksp22I	TGATCA	1 cut(s)	1287
LguI	GCTCTTC	1 cut(s)	2313
LmnI	GCTCC	3 cut(s)	152, 203, 990
Lsp1109I	GCAGC	6 cut(s)	1011, 1676, 1725, 1849, 2449, 2457
MaeII	ACGT	3 cut(s)	354, 569, 763
MaeIII	GTNAC	8 cut(s)	220, 247, 355, 647, 707, 1096, 1321, 2248
MfeI	CAATTG	1 cut(s)	1515
MflI	RGATCY	4 cut(s)	922, 1034, 1076, 1111
MhlI	GDGCHC	3 cut(s)	995, 1500, 2054
MlsI	TGGCCA	2 cut(s)	429, 491
MluNI	TGGCCA	2 cut(s)	429, 491
MlyI	GAGTC	2 cut(s)	741, 1195
MmeI	TCCRAC	1 cut(s)	1411
Mox20I	TGGCCA	2 cut(s)	429, 491
MroXI	GAANNNNTTC	1 cut(s)	1957
MscI	TGGCCA	2 cut(s)	429, 491
MseI	TTAA	7 cut(s)	644, 957, 1043, 1340, 1418, 2241, 2502
MslI	CAYNNNNRTG	3 cut(s)	1103, 1644, 2138
Msp20I	TGGCCA	2 cut(s)	429, 491
MspA1I	CMGCKG	1 cut(s)	2512
MspI	CCGG	4 cut(s)	195, 201, 270, 827
MspR9I	CCNGG	5 cut(s)	271, 327, 640, 1311, 2034
MunI	CAATTG	1 cut(s)	1515
MvaI	CCWGG	4 cut(s)	327, 640, 1311, 2034
NciI	CCSGG	1 cut(s)	271
NcoI	CCATGG	1 cut(s)	424
NlaIV	GGNNCC	3 cut(s)	199, 501, 1078
NmuCI	GTSAC	5 cut(s)	220, 247, 355, 707, 1096
PciSI	GCTCTTC	1 cut(s)	2313
PdmI	GAANNNNTTC	1 cut(s)	1957
PfeI	GAWTC	4 cut(s)	483, 544, 1724, 2165
PflFI	GACNNNGTC	1 cut(s)	705
PflMI	CCANNNNNTGG	2 cut(s)	1520, 2039
PleI	GAGTC	2 cut(s)	740, 1195
PmaCI	CACGTG	2 cut(s)	570, 764
PmlI	CACGTG	2 cut(s)	570, 764
PpsI	GAGTC	2 cut(s)	740, 1195
Ppu21I	YACGTR	2 cut(s)	570, 764
PpuMI	RGGWCCY	1 cut(s)	1592
PsiI	TTATAA	2 cut(s)	776, 1680
Psp124BI	GAGCTC	1 cut(s)	995
Psp5II	RGGWCCY	1 cut(s)	1592
Psp6I	CCWGG	4 cut(s)	325, 638, 1309, 2032
PspCI	CACGTG	2 cut(s)	570, 764
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	4 cut(s)	325, 638, 1309, 2032
PspN4I	GGNNCC	3 cut(s)	199, 501, 1078
PspPI	GGNCC	4 cut(s)	106, 306, 1457, 1592
PspPPI	RGGWCCY	1 cut(s)	1592
PstI	CTGCAG	2 cut(s)	1585, 1867
PstNI	CAGNNNCTG	3 cut(s)	1573, 1946, 2462
PsuI	RGATCY	4 cut(s)	922, 1034, 1076, 1111
PsyI	GACNNNGTC	1 cut(s)	705
PvuII	CAGCTG	1 cut(s)	2512
RsaI	GTAC	4 cut(s)	1131, 1180, 1587, 2093
RsaNI	GTAC	4 cut(s)	1130, 1179, 1586, 2092
RseI	CAYNNNNRTG	3 cut(s)	1103, 1644, 2138
SacI	GAGCTC	1 cut(s)	995
SapI	GCTCTTC	1 cut(s)	2313
SaqAI	TTAA	7 cut(s)	644, 957, 1043, 1340, 1418, 2241, 2502
Sau96I	GGNCC	4 cut(s)	106, 306, 1457, 1592
ScaI	AGTACT	1 cut(s)	1180
SchI	GAGTC	2 cut(s)	741, 1195
ScrFI	CCNGG	5 cut(s)	271, 327, 640, 1311, 2034
SduI	GDGCHC	3 cut(s)	995, 1500, 2054
SfcI	CTRYAG	4 cut(s)	1360, 1477, 1581, 1863
SinI	GGWCC	3 cut(s)	106, 1457, 1592
SmiMI	CAYNNNNRTG	3 cut(s)	1103, 1644, 2138
SmlI	CTYRAG	3 cut(s)	237, 837, 1274
SmoI	CTYRAG	3 cut(s)	237, 837, 1274
SspI	AATATT	2 cut(s)	1958, 2174
SstI	GAGCTC	1 cut(s)	995
StyD4I	CCNGG	5 cut(s)	269, 325, 638, 1309, 2032
StyI	CCWWGG	3 cut(s)	424, 858, 2386
TaaI	ACNGT	8 cut(s)	65, 532, 1164, 1481, 1495, 1977, 2313, 2331
TaiI	ACGT	3 cut(s)	357, 572, 766
TaqI	TCGA	4 cut(s)	315, 1137, 1488, 2368
TatI	WGTACW	2 cut(s)	1178, 1585
TauI	GCSGC	8 cut(s)	179, 182, 185, 188, 191, 325, 2416, 2456
TfiI	GAWTC	4 cut(s)	483, 544, 1724, 2165
Tru1I	TTAA	7 cut(s)	644, 957, 1043, 1340, 1418, 2241, 2502
Tru9I	TTAA	7 cut(s)	644, 957, 1043, 1340, 1418, 2241, 2502
TscAI	CASTG	5 cut(s)	382, 1498, 1585, 1676, 1723
TseFI	GTSAC	5 cut(s)	220, 247, 355, 707, 1096
TseI	GCWGC	6 cut(s)	999, 1664, 1713, 1862, 2445, 2462
Tsp45I	GTSAC	5 cut(s)	220, 247, 355, 707, 1096
TspDTI	ATGAA	9 cut(s)	920, 1086, 1104, 1121, 1385, 1737, 2031, 2122, 2172
TspGWI	ACGGA	3 cut(s)	139, 2251, 2499
TspRI	CASTG	5 cut(s)	382, 1498, 1585, 1676, 1723
Tth111I	GACNNNGTC	1 cut(s)	705
Van91I	CCANNNNNTGG	2 cut(s)	1520, 2039
VneI	GTGCAC	2 cut(s)	1496, 2050
VpaK11BI	GGWCC	3 cut(s)	106, 1457, 1592
XagI	CCTNNNNNAGG	1 cut(s)	1990
XapI	RAATTY	3 cut(s)	89, 599, 1012
XmiI	GTMKAC	1 cut(s)	351
XmnI	GAANNNNTTC	1 cut(s)	1957
ZrmI	AGTACT	1 cut(s)	1180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.