Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0010595

Physical Location & Seq

Genomic Coordinates Reverse (-)

66376036 .. 66381910

Gene Structure 5875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG459600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGCCCTCTGCCTCATGCCAAACCTCAACCTCAATGTTCGTCCACAACTTCCACCGTCTCAGCCTCCGCAACTCCCCCAAATTCCGATGCGTCTTGGACCAGATTGCCCCCAACTTGGCCGTCTCCTCCTCCCTCAGCTCCGTCTTCACCTCTGCCAACCTCGTCGCCGCCGCCGCCGCCTCCGGCTCCGGCTCTCTCCACAGCGCCGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCGCCATCGCCTCCGGGGCTTGTCTCTCCACTAAAGTTGATTTCTTGTGGCCCAAACTCGAAACGCAGCCAGGCTGTGATATAGTGGAGGGAGTAGACGTGACTGGATATCCTATATTCAGTGATCCAAAGGTGCAAAAAGCTATTGCATTTGCCAAGAAGGCTCACCATGGCCAGCTACGCAAGACCGGAGACCCTTATTTAGTCCATTGCATCCATACAGGAAGAATCTTGGCCATGTTGGTTCCTTCAAGTGGCGAACGAGCTGTTCAGACGGTTGTTGCTGGGATTCTCCACGATGTCGTTGATGACACCTGTGAAAGTTTCAACCGCATAGATGAAGAATTTGGCGATGATGTAGCCAAGCTCGTAGCTGGAGTTTCCAGGTTAAGTTACATAAACCAGCTTTTGCGGAGACACCGCAGGATAAATGTGAATGACGGGAGACTTGGTCATGAGGAGGCAAATAACTTACGAGTCATGCTCTTGGGCATGGTTGATGATCCACGTGTAGTGCTTATAAAGCTTGCAGATCGTCTTCACAATATGAGAACAATTTACGCTCTGCCTCCGGCAAAAGCTCAAGCTGTTGCTAGGGAGACCTTGGTGATTTGGTGTTCCCTAGCATCCAGATTGGGTTTGTGGGCTATGAAAGCTGAACTGGAAGATCTGTGCTTTGCTGTTCTTCAGCCTCAAATGTTTAAGAACATGAGAGCTGATCTAGCTTCCATGTGGAGCTCTAGCAGCAAAGTAGGAAATTTGAAAAGAATATCTGCAAGATCCACCTTAAATGGAGGCAGCTCAGTTTCGGACAATGAAGGATCCATCAATGATGAAGATGTCACAACCATGAAGGATCTCTTGGAAGCCGTAGTACCTTTCGATGTATTGTTAGATCGGAGAAAACGGTCTAATTTTCTAAGTACTCTGGGACAAGATTTGGAGACTCATAAAAGACCAAAGGTTGTGCATGATGCTGGAATTGCTTTAGCATCTCTGGTAATTTGTGAGGAGGCACTTGAGCAGGAGTTGATCATATCAACTTCTTATGTTCCAGGGATGGAAGTAACTTTATCCAGCCGTTTAAAAAGTTTGTATAGCATCTACAGCAAGATGAAACGAAAAGATGTCAGCATCAATAAAGTTTATGATGCCCGTGCATTAAGGGTAGTTGTTGGAGACAAGAATGGAACTTTGCATGGACCTGCTGTCCAATGTTGCTACAGTCTTCTCGACACTGTGCACAAGCATTGGACACCAATTGATGGTGAGTTTGATGATTACATTGTCAATCCAAAGCCTAGTGGCTATCAGTCTCTGCACACTGCAGTACAAGGTCCTGACAAATCACCTTTGGAAGTTCAAATACGAACGCAGAGGATGCACGAGTATGCAGAACATGGACTTGCAGCACACTGGCTTTATAAAGAGACTGGAAACAAACTGTCTAACAGAAGCAGCACTGATGAATCTGAAATAGATGCAACATCCTTTATCTCCAAAACTATGGACGACCAAAATGATAGAGAAATTGATTTCTTTCAGAAGTATAGTATGTTGAAAATTGGGCATCCAGTTCTTAGAGTGGATGGAAGTCATCTTCTTGCTGCAGTTGTCATTAGGGTAGAGAAGGATGGAAGGGAATTACTCGTTGCCGTGAGCTTTGCACTAGAAGCTTCAGAAGCAGTCGCTGATAGAAAATATTCTTTTCAAAAACAACGGTGGGAAGCCTATGCAAGGTTATATAAGAAGGTTTCTGATGAATGGTGGTGTGAACCAGGACATGGGGATTGGTGCACTTGCCTAGAGAAATATACACTTTGTCGAGATGGTATGTACCACAAGGAAGATCAGTTTGGGAGATTACTGCCGACATTCATTCAGGTGATTGATTTGACAGATGAAGAAGAATCTGAATATTGGGCTGTTGTTTCTGCTATCTTTGAGGGAAGACAGCTTGATTACATTACACCTACGCCAAGATTTAACTCAGTTACATCAACTTCCATGGAAACTAGCATCAATAACAAGGTGCATTTGCTAAGGACAATGCTACGGTGGGAAGAGCAATTACGGTCTGAAGCAATTTATGGAAATGGACCAGCCATGTATCGACGGGGTTCTGTTGTCCTTGGGGAAGTGGTGATTATATGTTGGCCGCATGGCGAAATAATGAGGTTGACAACAGGCAGCACCGCCGCAGATGCTGCTAGAAGGAAAGGACTAGACGGAAAACTGGTTTTGGTTAATGGTCAGCTGGTGTTGCCCAATACAAAGCTCACAGATGGTGATGTGGTTGAAGTCAGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008728 GO:0008893 GO:0009116 GO:0009117 GO:0009119 GO:0009150 GO:0009259 GO:0009605 GO:0009987 GO:0009991 GO:0015969 GO:0016020 GO:0016740 GO:0016772 GO:0016778 GO:0016787 GO:0016788 GO:0016794 GO:0019637 GO:0019693 GO:0030312 GO:0031667 GO:0033865 GO:0033875 GO:0034032 GO:0034035 GO:0034641 GO:0042278 GO:0042578 GO:0042594 GO:0044237 GO:0044238 GO:0044281 GO:0044464 GO:0046128 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:1901068 GO:1901135 GO:1901360 GO:1901564 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

851

Amino Acids

94.53

Weight (kDa)

6.53

Isoelectric Point (pI)

34.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD_4	PF13328	129 - 296	2.2e-43	HD domain
HD	PF01966	149 - 264	7.8e-09	HD domain
RelA_SpoT	PF04607	441 - 560	9.5e-36	Region found in RelA / SpoT proteins
DUF7589	PF24500	596 - 731	3.3e-75	Domain of unknown function (DUF7589)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010595)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33820 FvH4_7g33820
malus_domestica	MD07G1306500.v1.1
prunus_persica	Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1
pyrus_communis	pycom07g27950
rosa_chinensis	RchiOBHm_Chr1g0383931
rosa_laevigata	RLG00000026085
rosa_multiflora	Rmu_sc0005139.1_g000026
rosa_roxburghii	Rroxscaffold_4G00277130
rosa_rugosa	Rorug01G0443100 Rorug01G0443200 Rorug01G0443400.1 Rorug01G0443500.1
rosa_samantha	Rh1AG469100 Rh1CG439600 Rh1DG459600
rosa_wichuraiana	Rw1G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	764, 1668
Acc36I	ACCTGC	1 cut(s)	1456
AccB7I	CCANNNNNTGG	2 cut(s)	1508, 2027
AccI	GTMKAC	1 cut(s)	339
AclWI	GGATC	6 cut(s)	362, 740, 1017, 1059, 1072, 1107
AcoI	YGGCCR	4 cut(s)	117, 415, 477, 2399
AcsI	RAATTY	3 cut(s)	80, 587, 1000
AcuI	CTGAAG	3 cut(s)	914, 1905, 2343
AcvI	CACGTG	1 cut(s)	752
AfaI	GTAC	4 cut(s)	1119, 1168, 1575, 2081
AfiI	CCNNNNNNNGG	5 cut(s)	115, 497, 1508, 1980, 2027
AflIII	ACRYGT	1 cut(s)	751
AgsI	TTSAA	7 cut(s)	495, 571, 1006, 1607, 1804, 1955, 2543
AhdI	GACNNNNNGTC	1 cut(s)	1451
AjiI	CACGTC	1 cut(s)	343
AjnI	CCWGG	4 cut(s)	313, 626, 1297, 2020
AjuI	GAANNNNNNNTTGG	4 cut(s)	1088, 1120, 2082, 2114
Alw21I	GWGCWC	3 cut(s)	983, 1488, 2042
Alw44I	GTGCAC	2 cut(s)	1484, 2038
AlwI	GGATC	6 cut(s)	362, 740, 1017, 1059, 1072, 1107
AlwNI	CAGNNNCTG	3 cut(s)	1561, 1934, 2450
AoxI	GGCC	5 cut(s)	117, 293, 415, 477, 2399
ApaLI	GTGCAC	2 cut(s)	1484, 2038
ApeKI	GCWGC	8 cut(s)	310, 987, 1041, 1652, 1701, 1850, 2433, 2450
ApoI	RAATTY	3 cut(s)	80, 587, 1000
Asp700I	GAANNNNTTC	1 cut(s)	1945
AspLEI	GCGC	1 cut(s)	206
AspS9I	GGNCC	5 cut(s)	97, 294, 1445, 1580, 2342
AsuC2I	CCSGG	1 cut(s)	259
AvaII	GGWCC	4 cut(s)	97, 1445, 1580, 2342
BaeGI	GKGCMC	2 cut(s)	1488, 2042
BalI	TGGCCA	2 cut(s)	417, 479
BamHI	GGATCC	1 cut(s)	1064
BanII	GRGCYC	1 cut(s)	983
BarI	GAAGNNNNNNTAC	6 cut(s)	1101, 1133, 1593, 1625, 2298, 2330
BauI	CACGAG	1 cut(s)	1628
BbrPI	CACGTG	1 cut(s)	752
BbsI	GAAGAC	4 cut(s)	136, 773, 1463, 2200
Bbv12I	GWGCWC	3 cut(s)	983, 1488, 2042
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	8 cut(s)	322, 999, 1053, 1664, 1713, 1837, 2437, 2445
BccI	CCATC	9 cut(s)	227, 257, 1076, 1297, 1502, 1826, 1871, 2066, 2522
BceAI	ACGGC	6 cut(s)	104, 191, 227, 1097, 1308, 1883
BciT130I	CCWGG	4 cut(s)	315, 628, 1299, 2022
BclI	TGATCA	1 cut(s)	1275
BcnI	CCSGG	1 cut(s)	259
BfmI	CTRYAG	4 cut(s)	1348, 1465, 1569, 1851
BfoI	RGCGCY	1 cut(s)	207
BfuAI	ACCTGC	1 cut(s)	1456
BglI	GCCNNNNNGGC	2 cut(s)	260, 404
BglII	AGATCT	1 cut(s)	910
BmcAI	AGTACT	1 cut(s)	1168
Bme1390I	CCNGG	5 cut(s)	259, 315, 628, 1299, 2022
Bme18I	GGWCC	4 cut(s)	97, 1445, 1580, 2342
BmeRI	GACNNNNNGTC	1 cut(s)	1451
BmgBI	CACGTC	1 cut(s)	343
BmgT120I	GGNCC	5 cut(s)	97, 294, 1445, 1580, 2342
BmiI	GGNNCC	3 cut(s)	187, 489, 1066
BmrFI	CCNGG	5 cut(s)	259, 315, 628, 1299, 2022
BpiI	GAAGAC	4 cut(s)	136, 773, 1463, 2200
BplI	GAGNNNNNCTC	2 cut(s)	711, 743
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	2 cut(s)	134, 2285
BpuEI	CTTGAG	3 cut(s)	210, 810, 1283
BpuMI	CCSGG	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	752
BsaI	GGTCTC	2 cut(s)	429, 836
BsaJI	CCNNGG	6 cut(s)	258, 412, 846, 1298, 2250, 2374
BsaWI	WCCGGW	1 cut(s)	431
BsaXI	ACNNNNNCTCC	4 cut(s)	327, 357, 679, 709
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 497, 1508, 1980, 2027
Bse1I	ACTGG	6 cut(s)	352, 909, 1664, 1681, 1817, 2484
Bse3DI	GCAATG	1 cut(s)	451
BseBI	CCWGG	4 cut(s)	315, 628, 1299, 2022
BseDI	CCNNGG	6 cut(s)	258, 412, 846, 1298, 2250, 2374
BseGI	GGATG	8 cut(s)	456, 869, 1308, 1629, 1730, 1813, 1837, 1882
BseLI	CCNNNNNNNGG	5 cut(s)	115, 497, 1508, 1980, 2027
BseMI	GCAATG	1 cut(s)	451
BseMII	CTCAG	4 cut(s)	73, 148, 1059, 2247
BseNI	ACTGG	6 cut(s)	352, 909, 1664, 1681, 1817, 2484
BseRI	GAGGAG	4 cut(s)	115, 118, 716, 1268
BseSI	GKGCMC	2 cut(s)	1488, 2042
BseXI	GCAGC	8 cut(s)	322, 999, 1053, 1664, 1713, 1837, 2437, 2445
BseYI	CCCAGC	1 cut(s)	527
BsgI	GTGCAG	1 cut(s)	1547
BshFI	GGCC	5 cut(s)	119, 295, 417, 479, 2401
BsiHKAI	GWGCWC	3 cut(s)	983, 1488, 2042
BsiSI	CCGG	5 cut(s)	183, 189, 258, 432, 815
BslFI	GGGAC	1 cut(s)	1188
BslI	CCNNNNNNNGG	5 cut(s)	115, 497, 1508, 1980, 2027
BsmBI	CGTCTC	2 cut(s)	62, 127
BsmFI	GGGAC	1 cut(s)	1188
BsnI	GGCC	5 cut(s)	119, 295, 417, 479, 2401
Bso31I	GGTCTC	2 cut(s)	429, 836
Bsp1286I	GDGCHC	3 cut(s)	983, 1488, 2042
Bsp19I	CCATGG	2 cut(s)	412, 2250
BspANI	GGCC	5 cut(s)	119, 295, 417, 479, 2401
BspCNI	CTCAG	4 cut(s)	72, 147, 1058, 2246
BspHI	TCATGA	1 cut(s)	697
BspLI	GGNNCC	3 cut(s)	187, 489, 1066
BspMAI	CTGCAG	2 cut(s)	1573, 1855
BspMI	ACCTGC	1 cut(s)	1456
BspPI	GGATC	6 cut(s)	362, 740, 1017, 1059, 1072, 1107
BspQI	GCTCTTC	1 cut(s)	2301
BspTNI	GGTCTC	2 cut(s)	429, 836
BsrDI	GCAATG	1 cut(s)	451
BsrI	ACTGG	6 cut(s)	352, 909, 1664, 1681, 1817, 2484
BssECI	CCNNGG	6 cut(s)	258, 412, 846, 1298, 2250, 2374
BssSI	CACGAG	1 cut(s)	1628
BssT1I	CCWWGG	4 cut(s)	412, 846, 2250, 2374
Bst2BI	CACGAG	1 cut(s)	1628
Bst2UI	CCWGG	4 cut(s)	315, 628, 1299, 2022
Bst4CI	ACNGT	9 cut(s)	56, 520, 1152, 1469, 1483, 1689, 1965, 2301, 2319
Bst6I	CTCTTC	1 cut(s)	2301
BstAPI	GCANNNNNTGC	2 cut(s)	1624, 2450
BstBAI	YACGTR	1 cut(s)	752
BstC8I	GCNNGC	2 cut(s)	419, 771
BstDEI	CTNAG	7 cut(s)	59, 134, 1045, 1163, 1823, 2233, 2285
BstDSI	CCRYGG	2 cut(s)	412, 2250
BstENI	CCTNNNNNAGG	1 cut(s)	1978
BstF5I	GGATG	8 cut(s)	456, 869, 1308, 1629, 1730, 1813, 1837, 1882
BstH2I	RGCGCY	1 cut(s)	207
BstHHI	GCGC	1 cut(s)	206
BstNI	CCWGG	4 cut(s)	315, 628, 1299, 2022
BstSCI	CCNGG	5 cut(s)	257, 313, 626, 1297, 2020
BstSFI	CTRYAG	4 cut(s)	1348, 1465, 1569, 1851
BstSLI	GKGCMC	2 cut(s)	1488, 2042
BstV1I	GCAGC	8 cut(s)	322, 999, 1053, 1664, 1713, 1837, 2437, 2445
BstV2I	GAAGAC	4 cut(s)	136, 773, 1463, 2200
BstX2I	RGATCY	4 cut(s)	910, 1022, 1064, 1099
BstXI	CCANNNNNNTGG	1 cut(s)	1750
BstYI	RGATCY	4 cut(s)	910, 1022, 1064, 1099
BsuRI	GGCC	5 cut(s)	119, 295, 417, 479, 2401
BtgI	CCRYGG	2 cut(s)	412, 2250
BtgZI	GCGATG	2 cut(s)	235, 609
BtrI	CACGTC	1 cut(s)	343
BtsCI	GGATG	8 cut(s)	456, 869, 1308, 1629, 1730, 1813, 1837, 1882
BtsI	GCAGTG	1 cut(s)	1566
BtsIMutI	CAGTG	5 cut(s)	370, 1479, 1566, 1657, 1704
BveI	ACCTGC	1 cut(s)	1456
Cac8I	GCNNGC	2 cut(s)	419, 771
CaiI	CAGNNNCTG	3 cut(s)	1561, 1934, 2450
CciI	TCATGA	1 cut(s)	697
CfoI	GCGC	1 cut(s)	206
Cfr13I	GGNCC	5 cut(s)	97, 294, 1445, 1580, 2342
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	4 cut(s)	1118, 1167, 1574, 2080
CspCI	CAANNNNNGTGG	2 cut(s)	262, 297
CviQI	GTAC	4 cut(s)	1118, 1167, 1574, 2080
DdeI	CTNAG	7 cut(s)	59, 134, 1045, 1163, 1823, 2233, 2285
DraI	TTTAAA	1 cut(s)	1329
DriI	GACNNNNNGTC	1 cut(s)	1451
EaeI	YGGCCR	4 cut(s)	117, 415, 477, 2399
Eam1104I	CTCTTC	1 cut(s)	2301
Eam1105I	GACNNNNNGTC	1 cut(s)	1451
EarI	CTCTTC	1 cut(s)	2301
Ecl136II	GAGCTC	1 cut(s)	981
Eco130I	CCWWGG	4 cut(s)	412, 846, 2250, 2374
Eco24I	GRGCYC	1 cut(s)	983
Eco31I	GGTCTC	2 cut(s)	429, 836
Eco32I	GATATC	1 cut(s)	353
Eco47I	GGWCC	4 cut(s)	97, 1445, 1580, 2342
Eco53kI	GAGCTC	1 cut(s)	981
Eco57I	CTGAAG	3 cut(s)	914, 1905, 2343
Eco72I	CACGTG	1 cut(s)	752
EcoICRI	GAGCTC	1 cut(s)	981
EcoNI	CCTNNNNNAGG	1 cut(s)	1978
EcoO109I	RGGNCCY	1 cut(s)	1580
EcoRII	CCWGG	4 cut(s)	313, 626, 1297, 2020
EcoRV	GATATC	1 cut(s)	353
EcoT14I	CCWWGG	4 cut(s)	412, 846, 2250, 2374
EcoT38I	GRGCYC	1 cut(s)	983
ErhI	CCWWGG	4 cut(s)	412, 846, 2250, 2374
Esp3I	CGTCTC	2 cut(s)	62, 127
FalI	AAGNNNNNCTT	2 cut(s)	1088, 1120
FaqI	GGGAC	1 cut(s)	1188
FbaI	TGATCA	1 cut(s)	1275
FblI	GTMKAC	1 cut(s)	339
FokI	GGATG	8 cut(s)	443, 856, 1315, 1636, 1717, 1800, 1844, 1889
FriOI	GRGCYC	1 cut(s)	983
GlaI	GCGC	1 cut(s)	205
GsaI	CCCAGC	1 cut(s)	531
GsuI	CTGGAG	1 cut(s)	639
HaeII	RGCGCY	1 cut(s)	207
HaeIII	GGCC	5 cut(s)	119, 295, 417, 479, 2401
HapII	CCGG	5 cut(s)	183, 189, 258, 432, 815
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	1 cut(s)	206
Hin6I	GCGC	1 cut(s)	204
HinP1I	GCGC	1 cut(s)	204
HincII	GTYRAC	1 cut(s)	2424
HindII	GTYRAC	1 cut(s)	2424
HindIII	AAGCTT	2 cut(s)	767, 1917
HinfI	GANTC	6 cut(s)	471, 532, 720, 1189, 1712, 2153
HpaII	CCGG	5 cut(s)	183, 189, 258, 432, 815
Hpy166II	GTNNAC	6 cut(s)	43, 340, 1486, 2018, 2040, 2424
Hpy188III	TCNNGA	5 cut(s)	698, 873, 1475, 1583, 2069
Hpy8I	GTNNAC	6 cut(s)	43, 340, 1486, 2018, 2040, 2424
Hpy99I	CGWCG	3 cut(s)	167, 248, 2361
HpyAV	CCTTC	8 cut(s)	397, 501, 1055, 1090, 1867, 1875, 1987, 2451
HpyCH4III	ACNGT	9 cut(s)	56, 520, 1152, 1469, 1483, 1689, 1965, 2301, 2319
HpyCH4IV	ACGT	2 cut(s)	342, 751
HpyF3I	CTNAG	7 cut(s)	59, 134, 1045, 1163, 1823, 2233, 2285
HpySE526I	ACGT	2 cut(s)	342, 751
HspAI	GCGC	1 cut(s)	204
Ksp22I	TGATCA	1 cut(s)	1275
LguI	GCTCTTC	1 cut(s)	2301
LmnI	GCTCC	3 cut(s)	143, 191, 978
Lsp1109I	GCAGC	8 cut(s)	322, 999, 1053, 1664, 1713, 1837, 2437, 2445
MaeII	ACGT	2 cut(s)	342, 751
MaeIII	GTNAC	7 cut(s)	208, 235, 343, 635, 1084, 1309, 2236
MfeI	CAATTG	1 cut(s)	1503
MflI	RGATCY	4 cut(s)	910, 1022, 1064, 1099
MhlI	GDGCHC	3 cut(s)	983, 1488, 2042
MlsI	TGGCCA	2 cut(s)	417, 479
MluNI	TGGCCA	2 cut(s)	417, 479
MlyI	GAGTC	2 cut(s)	729, 1183
MmeI	TCCRAC	1 cut(s)	1399
Mox20I	TGGCCA	2 cut(s)	417, 479
MroXI	GAANNNNTTC	1 cut(s)	1945
MscI	TGGCCA	2 cut(s)	417, 479
MseI	TTAA	7 cut(s)	632, 945, 1031, 1328, 1406, 2229, 2490
MslI	CAYNNNNRTG	3 cut(s)	1091, 1632, 2126
Msp20I	TGGCCA	2 cut(s)	417, 479
MspA1I	CMGCKG	1 cut(s)	2500
MspI	CCGG	5 cut(s)	183, 189, 258, 432, 815
MspR9I	CCNGG	5 cut(s)	259, 315, 628, 1299, 2022
MunI	CAATTG	1 cut(s)	1503
MvaI	CCWGG	4 cut(s)	315, 628, 1299, 2022
NciI	CCSGG	1 cut(s)	259
NcoI	CCATGG	2 cut(s)	412, 2250
NlaIV	GGNNCC	3 cut(s)	187, 489, 1066
NmuCI	GTSAC	4 cut(s)	208, 235, 343, 1084
PagI	TCATGA	1 cut(s)	697
PciSI	GCTCTTC	1 cut(s)	2301
PdmI	GAANNNNTTC	1 cut(s)	1945
PfeI	GAWTC	4 cut(s)	471, 532, 1712, 2153
PflFI	GACNNNGTC	1 cut(s)	693
PflMI	CCANNNNNTGG	2 cut(s)	1508, 2027
PleI	GAGTC	2 cut(s)	728, 1183
PmaCI	CACGTG	1 cut(s)	752
PmlI	CACGTG	1 cut(s)	752
PpsI	GAGTC	2 cut(s)	728, 1183
Ppu21I	YACGTR	1 cut(s)	752
PpuMI	RGGWCCY	1 cut(s)	1580
PsiI	TTATAA	2 cut(s)	764, 1668
Psp124BI	GAGCTC	1 cut(s)	983
Psp5II	RGGWCCY	1 cut(s)	1580
Psp6I	CCWGG	4 cut(s)	313, 626, 1297, 2020
PspCI	CACGTG	1 cut(s)	752
PspFI	CCCAGC	1 cut(s)	527
PspGI	CCWGG	4 cut(s)	313, 626, 1297, 2020
PspN4I	GGNNCC	3 cut(s)	187, 489, 1066
PspPI	GGNCC	5 cut(s)	97, 294, 1445, 1580, 2342
PspPPI	RGGWCCY	1 cut(s)	1580
PstI	CTGCAG	2 cut(s)	1573, 1855
PstNI	CAGNNNCTG	3 cut(s)	1561, 1934, 2450
PsuI	RGATCY	4 cut(s)	910, 1022, 1064, 1099
PsyI	GACNNNGTC	1 cut(s)	693
PvuII	CAGCTG	1 cut(s)	2500
RsaI	GTAC	4 cut(s)	1119, 1168, 1575, 2081
RsaNI	GTAC	4 cut(s)	1118, 1167, 1574, 2080
RseI	CAYNNNNRTG	3 cut(s)	1091, 1632, 2126
SacI	GAGCTC	1 cut(s)	983
SapI	GCTCTTC	1 cut(s)	2301
SaqAI	TTAA	7 cut(s)	632, 945, 1031, 1328, 1406, 2229, 2490
Sau96I	GGNCC	5 cut(s)	97, 294, 1445, 1580, 2342
ScaI	AGTACT	1 cut(s)	1168
SchI	GAGTC	2 cut(s)	729, 1183
ScrFI	CCNGG	5 cut(s)	259, 315, 628, 1299, 2022
SduI	GDGCHC	3 cut(s)	983, 1488, 2042
SfcI	CTRYAG	4 cut(s)	1348, 1465, 1569, 1851
SinI	GGWCC	4 cut(s)	97, 1445, 1580, 2342
SmiMI	CAYNNNNRTG	3 cut(s)	1091, 1632, 2126
SmlI	CTYRAG	3 cut(s)	225, 825, 1262
SmoI	CTYRAG	3 cut(s)	225, 825, 1262
SspI	AATATT	2 cut(s)	1946, 2162
SstI	GAGCTC	1 cut(s)	983
StyD4I	CCNGG	5 cut(s)	257, 313, 626, 1297, 2020
StyI	CCWWGG	4 cut(s)	412, 846, 2250, 2374
TaaI	ACNGT	9 cut(s)	56, 520, 1152, 1469, 1483, 1689, 1965, 2301, 2319
TaiI	ACGT	2 cut(s)	345, 754
TaqI	TCGA	5 cut(s)	303, 1125, 1476, 2068, 2356
TatI	WGTACW	2 cut(s)	1166, 1573
TauI	GCSGC	6 cut(s)	170, 173, 176, 179, 2404, 2444
TfiI	GAWTC	4 cut(s)	471, 532, 1712, 2153
Tru1I	TTAA	7 cut(s)	632, 945, 1031, 1328, 1406, 2229, 2490
Tru9I	TTAA	7 cut(s)	632, 945, 1031, 1328, 1406, 2229, 2490
TscAI	CASTG	5 cut(s)	370, 1486, 1573, 1664, 1711
TseFI	GTSAC	4 cut(s)	208, 235, 343, 1084
TseI	GCWGC	8 cut(s)	310, 987, 1041, 1652, 1701, 1850, 2433, 2450
Tsp45I	GTSAC	4 cut(s)	208, 235, 343, 1084
TspGWI	ACGGA	2 cut(s)	130, 2487
TspRI	CASTG	5 cut(s)	370, 1486, 1573, 1664, 1711
Tth111I	GACNNNGTC	1 cut(s)	693
Van91I	CCANNNNNTGG	2 cut(s)	1508, 2027
VneI	GTGCAC	2 cut(s)	1484, 2038
VpaK11BI	GGWCC	4 cut(s)	97, 1445, 1580, 2342
XagI	CCTNNNNNAGG	1 cut(s)	1978
XapI	RAATTY	3 cut(s)	80, 587, 1000
XmiI	GTMKAC	1 cut(s)	339
XmnI	GAANNNNTTC	1 cut(s)	1945
ZrmI	AGTACT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.