Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0010595

Physical Location & Seq

Genomic Coordinates Reverse (-)

69334219 .. 69339773

Gene Structure 5555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG439600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGTTCGTCCACAACTTCCACCGTCTCAGCCTCCGCAACTCCCCCAAATTCCGATGCGTCTTGGACCAGATTGCCCCCAACTTGCCCGTCTCCTCCTCCCTCAGCTCCGTCTTCACCTCTGCCAACCTCGTCGCCGCCGCCGCCGCCTCCGGCTCCGGCTCTCTCCACAGCGCCGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCGCCATCGCCTCCGGGGCTTGTCTCTCCACTAAAGTTGATTTCTTGTGGCCCAAACTCGAAACGCAGCCAGGCTGTGATATAGTGGAGGGAGTAGACGTGACTGGATATCCTATATTCAGTGATCCAAAGGTGCAAAAAGCTATTGCATTTGCCAAGAAGGCTCACCATGGCCAGCTACGCAAGACCGGAGACCCTTATTTAGTCCATTGCATCCATACAGGAAGAATCTTGGCCATGTTGGTTCCTTCAAGTGGCGAACGAGCTGTTCAGACGGTTGTTGCTGGGATTCTCCACGATGTCGTTGATGACACGTGTGAAAGTTTCAACCGCATAGAAGAAGAATTTGGCGATGACGTAGCCAAGCTCGTAGCTGGAGTTTCCAGGTTAAGTTACATAAACCAGCTTTTGCGGAGACACCGCAGGATAAATGTGAATGACGGGAGACTTGGTCACGAGGAGGCAAATAACTTACGAGTCATGCTCTTGGGCATGGTTGATGATCCACGTGTAGTGCTTATAAAGCTTGCAGATCGTCTTCACAATATGAGAACAATTTACGCTCTGCCTCCGGCAAAAGCTCAAGCTGTTGCTAGGGAGACCTTGGTGATTTGGTGTTCTCTAGCATCCAGATTGGGTTTGTGGGCTATGAAAGCTGAACTGGAAGATCTGTGCTTTGCTGTTCTTCAGCCTCAAATGTTTAAGAACATGAGAGCTGATCTAGCTTCCATGTGGAGCTCTAGCAGCAAAGTAGGAAATTTGAAAAGAATATCTGCAAGAACCACCTTAAATGGAGGAACCTCAGTTTCAAACAATGAAGGATCCATGAATGATGAAGATGTCACAACCATGAAGGATCTCTTGGAAGCCGTAGTACCTTTCGATGTATTGTTAGATCGGAGAAAACGGTCTAATTTTCTAAGTACTCTAGGACAAGATTTGGAGACTCATAAAAGACCAAAGGTTGTGCATGATGCTGGAATTGCTTTAGCATCTCTGGTAATTTGTGAGGAGGCACTTGAGCAGGAGTTGATCATATCAACTTCTTATGTTCCAGGGATGGAAGTAACTTTATCCAGCCGTTTAAAAAGTTTGTATAGCATCTACAGCAAGATGAAACGAAAAGATGTCAGCATCAATAAAGTTTATGATGCCCGTGCATTAAGGGTAGTTGTTGGAGACAAGAATGGAACTTTGCATGGACCTGCTGTCCAATGTTGCTACAGTCTTCTAGACACTGTGCACAAGCATTGGACACCAATTGATGGTGAGTTTGATGATTACATTGTCAATCCAAAGCCTAGTGGCTATCAGTCTCTGCACACTGCAGTACAAGGTCCTGACAGATCACCTTTGGAAGTTCAAATACGAACACAGAGGATGCACGAGTATGCAGAACATGGACTTGCAGCACACTGGCTTTATAAAGAGACTGGAAACAAACTGTCGAACAGAACTAGCACTGATGAATCTGAAATAGATGCAACATCCTTTATCTCCAAAACTATGGACGACCAAAATGATAGAGAAATTGATTTCTTTCAGAAGTATAGTATGTTGAAAATTGGACATCCAGTTCTTAGAGTGGATGGAAGTCATCTTCTTGCTGCAGTTGTCATTAGAGTAGAGAAGGATGGAAGGGAATTACTCGTTGCCGTGAGCTTTGGACTAGAAGCTTCAGAAGCAGTCGCTGATAGAAAATATTCTTTTCAAAAACAACGGTGGGAAGCCTATGCAAGGTTATATAAGAAGGTTTCTGATGAGTGGTGGTGTGAACCAGGACATGGGGATTGGTGCACTTGCCTAGAGAAATATACACTTTGTCGAGACGGTATGTACCACAAGGAAGATCAGTTTGGGAGATTACTGCCAACATTCATTCAGGTGATTGATTTGACAGATGAAGAAGAATCTGAATATTGGGCTGTTGTTTCTGCTATCTTTGAGGGAAGACAGCTTGATTACATTACACCTACGCCAAGATTTAACTCAGTTACATCAACTTCCATGGAAACTAGCATCAATAACAAGGTGCATTTGCTAAGGACAATGCTACGGTGGGAAGAGCAATTACGGTCTGAAGCAATTTATGGAAATGGACAAGCCATGTATCGACGGGGTTCTGTTGTCCTTGGGGAAGTGGTGATTATATGTTGGCCGCATGGCGAAATAATGAGGTTGACAACAGGCAGCACCGCCGCAGATGCTGCTAGAAGGAAAGGACTAGACGGAAAACTGGTTTTGGTTAATGGTCAGCTGGTGTTGCCCAATACAAAGCTCACAGATGGTGATGTGGTTGAAGTCAGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008728 GO:0008893 GO:0009116 GO:0009117 GO:0009119 GO:0009150 GO:0009259 GO:0009605 GO:0009987 GO:0009991 GO:0015969 GO:0016020 GO:0016740 GO:0016772 GO:0016778 GO:0016787 GO:0016788 GO:0016794 GO:0019637 GO:0019693 GO:0030312 GO:0031667 GO:0033865 GO:0033875 GO:0034032 GO:0034035 GO:0034641 GO:0042278 GO:0042578 GO:0042594 GO:0044237 GO:0044238 GO:0044281 GO:0044464 GO:0046128 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:1901068 GO:1901135 GO:1901360 GO:1901564 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

840

Amino Acids

93.59

Weight (kDa)

6.61

Isoelectric Point (pI)

33.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD_4	PF13328	118 - 285	6.7e-44	HD domain
HD	PF01966	138 - 253	4.4e-09	HD domain
RelA_SpoT	PF04607	430 - 549	1.5e-35	Region found in RelA / SpoT proteins
DUF7589	PF24500	585 - 720	2.7e-75	Domain of unknown function (DUF7589)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010595)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33820 FvH4_7g33820
malus_domestica	MD07G1306500.v1.1
prunus_persica	Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1
pyrus_communis	pycom07g27950
rosa_chinensis	RchiOBHm_Chr1g0383931
rosa_laevigata	RLG00000026085
rosa_multiflora	Rmu_sc0005139.1_g000026
rosa_roxburghii	Rroxscaffold_4G00277130
rosa_rugosa	Rorug01G0443100 Rorug01G0443200 Rorug01G0443400.1 Rorug01G0443500.1
rosa_samantha	Rh1AG469100 Rh1CG439600 Rh1DG459600
rosa_wichuraiana	Rw1G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	731, 1635
Acc36I	ACCTGC	1 cut(s)	1423
AccB7I	CCANNNNNTGG	2 cut(s)	1475, 1994
AccI	GTMKAC	1 cut(s)	306
AclWI	GGATC	5 cut(s)	329, 707, 1026, 1039, 1074
AcoI	YGGCCR	3 cut(s)	382, 444, 2366
AcsI	RAATTY	3 cut(s)	47, 554, 967
AcuI	CTGAAG	3 cut(s)	881, 1872, 2310
AcvI	CACGTG	2 cut(s)	525, 719
AfaI	GTAC	4 cut(s)	1086, 1135, 1542, 2048
AfiI	CCNNNNNNNGG	4 cut(s)	464, 1475, 1947, 1994
AflIII	ACRYGT	3 cut(s)	522, 524, 718
AgsI	TTSAA	8 cut(s)	462, 538, 973, 1020, 1574, 1771, 1922, 2510
AhdI	GACNNNNNGTC	1 cut(s)	1418
AjiI	CACGTC	1 cut(s)	310
AjnI	CCWGG	4 cut(s)	280, 593, 1264, 1987
AjuI	GAANNNNNNNTTGG	6 cut(s)	540, 572, 1055, 1087, 2049, 2081
AloI	GAACNNNNNNTCC	2 cut(s)	1770, 1802
Alw21I	GWGCWC	3 cut(s)	950, 1455, 2009
Alw44I	GTGCAC	2 cut(s)	1451, 2005
AlwI	GGATC	5 cut(s)	329, 707, 1026, 1039, 1074
AlwNI	CAGNNNCTG	3 cut(s)	1528, 1901, 2417
AoxI	GGCC	4 cut(s)	260, 382, 444, 2366
ApaLI	GTGCAC	2 cut(s)	1451, 2005
ApeKI	GCWGC	6 cut(s)	277, 954, 1619, 1817, 2400, 2417
ApoI	RAATTY	3 cut(s)	47, 554, 967
Asp700I	GAANNNNTTC	1 cut(s)	1912
AspLEI	GCGC	1 cut(s)	173
AspS9I	GGNCC	4 cut(s)	64, 261, 1412, 1547
AsuC2I	CCSGG	1 cut(s)	226
AvaII	GGWCC	3 cut(s)	64, 1412, 1547
BaeGI	GKGCMC	2 cut(s)	1455, 2009
BalI	TGGCCA	2 cut(s)	384, 446
BamHI	GGATCC	1 cut(s)	1031
BanII	GRGCYC	1 cut(s)	950
BarI	GAAGNNNNNNTAC	6 cut(s)	1068, 1100, 1560, 1592, 2265, 2297
BauI	CACGAG	2 cut(s)	665, 1595
BbrPI	CACGTG	2 cut(s)	525, 719
BbsI	GAAGAC	4 cut(s)	103, 740, 1430, 2167
Bbv12I	GWGCWC	3 cut(s)	950, 1455, 2009
BbvCI	CCTCAGC	1 cut(s)	101
BbvI	GCAGC	6 cut(s)	289, 966, 1631, 1804, 2404, 2412
BccI	CCATC	7 cut(s)	194, 224, 1264, 1469, 1793, 1838, 2489
BceAI	ACGGC	5 cut(s)	158, 194, 1064, 1275, 1850
BciT130I	CCWGG	4 cut(s)	282, 595, 1266, 1989
BclI	TGATCA	1 cut(s)	1242
BcnI	CCSGG	1 cut(s)	226
BfmI	CTRYAG	4 cut(s)	1315, 1432, 1536, 1818
BfoI	RGCGCY	1 cut(s)	174
BfuAI	ACCTGC	1 cut(s)	1423
BglI	GCCNNNNNGGC	2 cut(s)	227, 371
BglII	AGATCT	1 cut(s)	877
BmcAI	AGTACT	1 cut(s)	1135
Bme1390I	CCNGG	5 cut(s)	226, 282, 595, 1266, 1989
Bme18I	GGWCC	3 cut(s)	64, 1412, 1547
BmeRI	GACNNNNNGTC	1 cut(s)	1418
BmgBI	CACGTC	1 cut(s)	310
BmgT120I	GGNCC	4 cut(s)	64, 261, 1412, 1547
BmiI	GGNNCC	4 cut(s)	154, 456, 1009, 1033
BmrFI	CCNGG	5 cut(s)	226, 282, 595, 1266, 1989
BpiI	GAAGAC	4 cut(s)	103, 740, 1430, 2167
BplI	GAGNNNNNCTC	2 cut(s)	678, 710
BpmI	CTGGAG	1 cut(s)	606
Bpu10I	CCTNAGC	2 cut(s)	101, 2252
BpuEI	CTTGAG	3 cut(s)	177, 777, 1250
BpuMI	CCSGG	1 cut(s)	226
BsaAI	YACGTR	2 cut(s)	525, 719
BsaI	GGTCTC	2 cut(s)	396, 803
BsaJI	CCNNGG	6 cut(s)	225, 379, 813, 1265, 2217, 2341
BsaWI	WCCGGW	1 cut(s)	398
BsaXI	ACNNNNNCTCC	4 cut(s)	294, 324, 646, 676
Bsc4I	CCNNNNNNNGG	4 cut(s)	464, 1475, 1947, 1994
Bse1I	ACTGG	6 cut(s)	319, 876, 1631, 1648, 1784, 2451
Bse3DI	GCAATG	1 cut(s)	418
BseBI	CCWGG	4 cut(s)	282, 595, 1266, 1989
BseDI	CCNNGG	6 cut(s)	225, 379, 813, 1265, 2217, 2341
BseGI	GGATG	8 cut(s)	423, 836, 1275, 1596, 1697, 1780, 1804, 1849
BseLI	CCNNNNNNNGG	4 cut(s)	464, 1475, 1947, 1994
BseMI	GCAATG	1 cut(s)	418
BseMII	CTCAG	4 cut(s)	40, 115, 1026, 2214
BseNI	ACTGG	6 cut(s)	319, 876, 1631, 1648, 1784, 2451
BseRI	GAGGAG	4 cut(s)	82, 85, 683, 1235
BseSI	GKGCMC	2 cut(s)	1455, 2009
BseXI	GCAGC	6 cut(s)	289, 966, 1631, 1804, 2404, 2412
BseYI	CCCAGC	1 cut(s)	494
BsgI	GTGCAG	1 cut(s)	1514
BshFI	GGCC	4 cut(s)	262, 384, 446, 2368
BsiHKAI	GWGCWC	3 cut(s)	950, 1455, 2009
BsiSI	CCGG	5 cut(s)	150, 156, 225, 399, 782
BslI	CCNNNNNNNGG	4 cut(s)	464, 1475, 1947, 1994
BsmBI	CGTCTC	3 cut(s)	29, 94, 2031
BsnI	GGCC	4 cut(s)	262, 384, 446, 2368
Bso31I	GGTCTC	2 cut(s)	396, 803
Bsp1286I	GDGCHC	3 cut(s)	950, 1455, 2009
Bsp19I	CCATGG	2 cut(s)	379, 2217
BspANI	GGCC	4 cut(s)	262, 384, 446, 2368
BspCNI	CTCAG	4 cut(s)	39, 114, 1025, 2213
BspLI	GGNNCC	4 cut(s)	154, 456, 1009, 1033
BspMAI	CTGCAG	2 cut(s)	1540, 1822
BspMI	ACCTGC	1 cut(s)	1423
BspPI	GGATC	5 cut(s)	329, 707, 1026, 1039, 1074
BspQI	GCTCTTC	1 cut(s)	2268
BspTNI	GGTCTC	2 cut(s)	396, 803
BsrDI	GCAATG	1 cut(s)	418
BsrI	ACTGG	6 cut(s)	319, 876, 1631, 1648, 1784, 2451
BssECI	CCNNGG	6 cut(s)	225, 379, 813, 1265, 2217, 2341
BssSI	CACGAG	2 cut(s)	665, 1595
BssT1I	CCWWGG	4 cut(s)	379, 813, 2217, 2341
Bst2BI	CACGAG	2 cut(s)	665, 1595
Bst2UI	CCWGG	4 cut(s)	282, 595, 1266, 1989
Bst6I	CTCTTC	1 cut(s)	2268
BstAPI	GCANNNNNTGC	1 cut(s)	2417
BstBAI	YACGTR	2 cut(s)	525, 719
BstC8I	GCNNGC	2 cut(s)	386, 738
BstDEI	CTNAG	7 cut(s)	26, 101, 1012, 1130, 1790, 2200, 2252
BstDSI	CCRYGG	2 cut(s)	379, 2217
BstENI	CCTNNNNNAGG	1 cut(s)	1945
BstF5I	GGATG	8 cut(s)	423, 836, 1275, 1596, 1697, 1780, 1804, 1849
BstH2I	RGCGCY	1 cut(s)	174
BstHHI	GCGC	1 cut(s)	173
BstNI	CCWGG	4 cut(s)	282, 595, 1266, 1989
BstSCI	CCNGG	5 cut(s)	224, 280, 593, 1264, 1987
BstSFI	CTRYAG	4 cut(s)	1315, 1432, 1536, 1818
BstSLI	GKGCMC	2 cut(s)	1455, 2009
BstV1I	GCAGC	6 cut(s)	289, 966, 1631, 1804, 2404, 2412
BstV2I	GAAGAC	4 cut(s)	103, 740, 1430, 2167
BstX2I	RGATCY	3 cut(s)	877, 1031, 1066
BstXI	CCANNNNNNTGG	1 cut(s)	1717
BstYI	RGATCY	3 cut(s)	877, 1031, 1066
BsuRI	GGCC	4 cut(s)	262, 384, 446, 2368
BtgI	CCRYGG	2 cut(s)	379, 2217
BtgZI	GCGATG	2 cut(s)	202, 576
BtrI	CACGTC	1 cut(s)	310
BtsCI	GGATG	8 cut(s)	423, 836, 1275, 1596, 1697, 1780, 1804, 1849
BtsI	GCAGTG	1 cut(s)	1533
BtsIMutI	CAGTG	5 cut(s)	337, 1446, 1533, 1624, 1671
BveI	ACCTGC	1 cut(s)	1423
Cac8I	GCNNGC	2 cut(s)	386, 738
CaiI	CAGNNNCTG	3 cut(s)	1528, 1901, 2417
CfoI	GCGC	1 cut(s)	173
Cfr13I	GGNCC	4 cut(s)	64, 261, 1412, 1547
CseI	GACGC	1 cut(s)	46
Csp6I	GTAC	4 cut(s)	1085, 1134, 1541, 2047
CspCI	CAANNNNNGTGG	2 cut(s)	229, 264
CviQI	GTAC	4 cut(s)	1085, 1134, 1541, 2047
DdeI	CTNAG	7 cut(s)	26, 101, 1012, 1130, 1790, 2200, 2252
DraI	TTTAAA	1 cut(s)	1296
DriI	GACNNNNNGTC	1 cut(s)	1418
EaeI	YGGCCR	3 cut(s)	382, 444, 2366
Eam1104I	CTCTTC	1 cut(s)	2268
Eam1105I	GACNNNNNGTC	1 cut(s)	1418
EarI	CTCTTC	1 cut(s)	2268
Ecl136II	GAGCTC	1 cut(s)	948
Eco130I	CCWWGG	4 cut(s)	379, 813, 2217, 2341
Eco24I	GRGCYC	1 cut(s)	950
Eco31I	GGTCTC	2 cut(s)	396, 803
Eco32I	GATATC	1 cut(s)	320
Eco47I	GGWCC	3 cut(s)	64, 1412, 1547
Eco53kI	GAGCTC	1 cut(s)	948
Eco57I	CTGAAG	3 cut(s)	881, 1872, 2310
Eco72I	CACGTG	2 cut(s)	525, 719
EcoICRI	GAGCTC	1 cut(s)	948
EcoNI	CCTNNNNNAGG	1 cut(s)	1945
EcoO109I	RGGNCCY	1 cut(s)	1547
EcoRII	CCWGG	4 cut(s)	280, 593, 1264, 1987
EcoRV	GATATC	1 cut(s)	320
EcoT14I	CCWWGG	4 cut(s)	379, 813, 2217, 2341
EcoT38I	GRGCYC	1 cut(s)	950
ErhI	CCWWGG	4 cut(s)	379, 813, 2217, 2341
Esp3I	CGTCTC	3 cut(s)	29, 94, 2031
FalI	AAGNNNNNCTT	2 cut(s)	1055, 1087
FbaI	TGATCA	1 cut(s)	1242
FblI	GTMKAC	1 cut(s)	306
FokI	GGATG	8 cut(s)	410, 823, 1282, 1603, 1684, 1767, 1811, 1856
FriOI	GRGCYC	1 cut(s)	950
GlaI	GCGC	1 cut(s)	172
GsaI	CCCAGC	1 cut(s)	498
GsuI	CTGGAG	1 cut(s)	606
HaeII	RGCGCY	1 cut(s)	174
HaeIII	GGCC	4 cut(s)	262, 384, 446, 2368
HapII	CCGG	5 cut(s)	150, 156, 225, 399, 782
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	1 cut(s)	173
Hin6I	GCGC	1 cut(s)	171
HinP1I	GCGC	1 cut(s)	171
HincII	GTYRAC	1 cut(s)	2391
HindII	GTYRAC	1 cut(s)	2391
HindIII	AAGCTT	2 cut(s)	734, 1884
HinfI	GANTC	6 cut(s)	438, 499, 687, 1156, 1679, 2120
HpaII	CCGG	5 cut(s)	150, 156, 225, 399, 782
Hpy166II	GTNNAC	6 cut(s)	10, 307, 1453, 1985, 2007, 2391
Hpy188III	TCNNGA	5 cut(s)	665, 840, 1442, 1550, 2036
Hpy8I	GTNNAC	6 cut(s)	10, 307, 1453, 1985, 2007, 2391
Hpy99I	CGWCG	3 cut(s)	134, 215, 2328
HpyAV	CCTTC	8 cut(s)	364, 468, 1022, 1057, 1834, 1842, 1954, 2418
HpyCH4IV	ACGT	4 cut(s)	309, 524, 567, 718
HpyF3I	CTNAG	7 cut(s)	26, 101, 1012, 1130, 1790, 2200, 2252
HpySE526I	ACGT	4 cut(s)	309, 524, 567, 718
HspAI	GCGC	1 cut(s)	171
Ksp22I	TGATCA	1 cut(s)	1242
LguI	GCTCTTC	1 cut(s)	2268
LmnI	GCTCC	3 cut(s)	110, 158, 945
Lsp1109I	GCAGC	6 cut(s)	289, 966, 1631, 1804, 2404, 2412
MaeII	ACGT	4 cut(s)	309, 524, 567, 718
MaeIII	GTNAC	8 cut(s)	175, 202, 310, 602, 662, 1051, 1276, 2203
MfeI	CAATTG	1 cut(s)	1470
MflI	RGATCY	3 cut(s)	877, 1031, 1066
MhlI	GDGCHC	3 cut(s)	950, 1455, 2009
MlsI	TGGCCA	2 cut(s)	384, 446
MluNI	TGGCCA	2 cut(s)	384, 446
MlyI	GAGTC	2 cut(s)	696, 1150
MmeI	TCCRAC	1 cut(s)	1366
Mox20I	TGGCCA	2 cut(s)	384, 446
MroXI	GAANNNNTTC	1 cut(s)	1912
MscI	TGGCCA	2 cut(s)	384, 446
MseI	TTAA	7 cut(s)	599, 912, 998, 1295, 1373, 2196, 2457
MslI	CAYNNNNRTG	3 cut(s)	1058, 1599, 2093
Msp20I	TGGCCA	2 cut(s)	384, 446
MspA1I	CMGCKG	1 cut(s)	2467
MspI	CCGG	5 cut(s)	150, 156, 225, 399, 782
MspR9I	CCNGG	5 cut(s)	226, 282, 595, 1266, 1989
MunI	CAATTG	1 cut(s)	1470
MvaI	CCWGG	4 cut(s)	282, 595, 1266, 1989
NciI	CCSGG	1 cut(s)	226
NcoI	CCATGG	2 cut(s)	379, 2217
NlaIV	GGNNCC	4 cut(s)	154, 456, 1009, 1033
NmuCI	GTSAC	5 cut(s)	175, 202, 310, 662, 1051
PciSI	GCTCTTC	1 cut(s)	2268
PdmI	GAANNNNTTC	1 cut(s)	1912
PfeI	GAWTC	4 cut(s)	438, 499, 1679, 2120
PflFI	GACNNNGTC	1 cut(s)	660
PflMI	CCANNNNNTGG	2 cut(s)	1475, 1994
PleI	GAGTC	2 cut(s)	695, 1150
PmaCI	CACGTG	2 cut(s)	525, 719
PmlI	CACGTG	2 cut(s)	525, 719
PpsI	GAGTC	2 cut(s)	695, 1150
Ppu21I	YACGTR	2 cut(s)	525, 719
PpuMI	RGGWCCY	1 cut(s)	1547
PsiI	TTATAA	2 cut(s)	731, 1635
Psp124BI	GAGCTC	1 cut(s)	950
Psp5II	RGGWCCY	1 cut(s)	1547
Psp6I	CCWGG	4 cut(s)	280, 593, 1264, 1987
PspCI	CACGTG	2 cut(s)	525, 719
PspFI	CCCAGC	1 cut(s)	494
PspGI	CCWGG	4 cut(s)	280, 593, 1264, 1987
PspN4I	GGNNCC	4 cut(s)	154, 456, 1009, 1033
PspPI	GGNCC	4 cut(s)	64, 261, 1412, 1547
PspPPI	RGGWCCY	1 cut(s)	1547
PstI	CTGCAG	2 cut(s)	1540, 1822
PstNI	CAGNNNCTG	3 cut(s)	1528, 1901, 2417
PsuI	RGATCY	3 cut(s)	877, 1031, 1066
PsyI	GACNNNGTC	1 cut(s)	660
PvuII	CAGCTG	1 cut(s)	2467
RsaI	GTAC	4 cut(s)	1086, 1135, 1542, 2048
RsaNI	GTAC	4 cut(s)	1085, 1134, 1541, 2047
RseI	CAYNNNNRTG	3 cut(s)	1058, 1599, 2093
SacI	GAGCTC	1 cut(s)	950
SapI	GCTCTTC	1 cut(s)	2268
SaqAI	TTAA	7 cut(s)	599, 912, 998, 1295, 1373, 2196, 2457
Sau96I	GGNCC	4 cut(s)	64, 261, 1412, 1547
ScaI	AGTACT	1 cut(s)	1135
SchI	GAGTC	2 cut(s)	696, 1150
ScrFI	CCNGG	5 cut(s)	226, 282, 595, 1266, 1989
SduI	GDGCHC	3 cut(s)	950, 1455, 2009
SfcI	CTRYAG	4 cut(s)	1315, 1432, 1536, 1818
SinI	GGWCC	3 cut(s)	64, 1412, 1547
SmiMI	CAYNNNNRTG	3 cut(s)	1058, 1599, 2093
SmlI	CTYRAG	3 cut(s)	192, 792, 1229
SmoI	CTYRAG	3 cut(s)	192, 792, 1229
SspI	AATATT	2 cut(s)	1913, 2129
SstI	GAGCTC	1 cut(s)	950
StyD4I	CCNGG	5 cut(s)	224, 280, 593, 1264, 1987
StyI	CCWWGG	4 cut(s)	379, 813, 2217, 2341
TaiI	ACGT	4 cut(s)	312, 527, 570, 721
TaqI	TCGA	5 cut(s)	270, 1092, 1658, 2035, 2323
TatI	WGTACW	2 cut(s)	1133, 1540
TauI	GCSGC	6 cut(s)	137, 140, 143, 146, 2371, 2411
TfiI	GAWTC	4 cut(s)	438, 499, 1679, 2120
Tru1I	TTAA	7 cut(s)	599, 912, 998, 1295, 1373, 2196, 2457
Tru9I	TTAA	7 cut(s)	599, 912, 998, 1295, 1373, 2196, 2457
TscAI	CASTG	5 cut(s)	337, 1453, 1540, 1631, 1678
TseFI	GTSAC	5 cut(s)	175, 202, 310, 662, 1051
TseI	GCWGC	6 cut(s)	277, 954, 1619, 1817, 2400, 2417
Tsp45I	GTSAC	5 cut(s)	175, 202, 310, 662, 1051
TspDTI	ATGAA	9 cut(s)	875, 1041, 1052, 1059, 1076, 1340, 1692, 2077, 2127
TspGWI	ACGGA	2 cut(s)	97, 2454
TspRI	CASTG	5 cut(s)	337, 1453, 1540, 1631, 1678
Tth111I	GACNNNGTC	1 cut(s)	660
Van91I	CCANNNNNTGG	2 cut(s)	1475, 1994
VneI	GTGCAC	2 cut(s)	1451, 2005
VpaK11BI	GGWCC	3 cut(s)	64, 1412, 1547
XagI	CCTNNNNNAGG	1 cut(s)	1945
XapI	RAATTY	3 cut(s)	47, 554, 967
XbaI	TCTAGA	1 cut(s)	1441
XmiI	GTMKAC	1 cut(s)	306
XmnI	GAANNNNTTC	1 cut(s)	1912
ZrmI	AGTACT	1 cut(s)	1135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.