FvH4_7g33891
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
24015104 .. 24019010
3907 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33891.t1

Sequence Viewer

Length: 1494 bp
ATGGCCTCCGATCCCGAGCAACCGCCGCGTTCTTCTCTCCATGAGGTTCAGAATTCAGGCGATGTTCAGATGCCTCTTCTTAATGGCGGCCAATTTTCAGACAACTATTCTGTTCTTGCCGCAGTACTCCCGTTTCTGTTCCCAGCTCTTGGAGGACTACTGTATGGCTATGATATTGGTGCCACGTCTTGTGCAACAATATCGGTAGAGTCGGCCACATTAAGTGGAGTATCATGGTACGACTTGTCATCTGTGGAAATTGGTCTTATAACCAGTGGCTCATTATATGGTGCCTTGATTGGCTCTGTGCTGGCCTTCAACATTGCTGACATCATAGGAAGGAGGTGGGAGCTGATTTCGTCTGCTATAGTCTATCTTATTGGGGCAATAGTAACAGCACTAGCACCTGACTTGCCTATTATGGTGATTGGGCGCGTTGTATTTGGTATAGGAATTGGACTGGCAATGCATGCTGCTCCCATGTATATTGCTGAGACAGCTCCAAGTCAGATACGAGGTCGACTAATATCACTTAAAGAATTCTTTATAGTACTCGGAATGGTTGCAGGTTATGGAATTGGTAGTCTTTTAGTGAGTATAGTTGGTGGTTGGCGGTATATGTATGGAGCTAGTGTCCCTCTGGCAGTAATTATGGGAATTGGAATGTGGTGGCTACCAGAGTCACCTAGATGGATCCTTCTACGCGCCATTCAAGGAAAAGGAAATATGAATGATTTGAAACAAAATGCAATCAGTTGTTTGTTCCGGCTTAGGGGTACAATTATTGGTGATTCAGCTCCTGCACTAGTAGACGAGATGCTTGATGAACTTTCTTATGTTGGTGAAGAGAAGGAAGCTACATTCTTAGAGATGTTTCATGGAAAATGCAAGAAAGCCCTCGTGATCGGTGCAGGGTTGGTGTTGTTCCAACAGATCACAGGGCAACCAAGTGTGCTGTATTATGCTGCATCAATTTTCCAGAGTGCAGGATTCTCAGCGGCATCTGACGCAACACGCGTCTCAATAGTACTTGGGTTATTCAAGTTGGTAATGACTGGAGTAGCTGTGCTTGTTGTGGATAGACTTGGGAGGAGACCTCTACTGCTTACAGGTGTTTCTGGGATGGTCATCTCTTTATTCCTCTTGGGGTCATATTACCTCTTCTTTGATGATACACCAGCCGTAGCTGTAATTGCACTGCTGGCATATGTTGGGTGTTATCAGTTCTCCTTTGGTCCCATTGGTTGGCTCATGATATCAGAAATATTTCCCTTGCGATTAAGAGGACGTGGACTTAGCATAGCAGTGCTTGTGAATTTTGCTGCGAATGCGCTGGTGACATTTTCATTTTCCCCTCTAGAGGCATGGCTGGGAGCTGGAATAGTGTTTTATATATTTGGAGCAATAGCCGTGGCATCTCTTGTTTTCATTTTCTTCATTGTCCCAGAGACAAAAGGGCTTACTCTTGAAGAAATCGAGACCAAATGCATTTAG

Protein Analysis

498

Amino Acids

53.17

Weight (kDa)

5.16

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 47 - 494 3.6e-99 Sugar (and other) transporter
MFS_1 PF07690 49 - 445 6.2e-30 Major Facilitator Superfamily
MFS_1 PF07690 324 - 485 1.5e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
Acc36I ACCTGC 1 cut(s) 557
AccB1I GGYRCC 2 cut(s) 179, 290
AccB7I CCANNNNNTGG 2 cut(s) 149, 1245
AccI GTMKAC 2 cut(s) 520, 810
AccII CGCG 4 cut(s) 28, 435, 705, 1017
AciI CCGC 6 cut(s) 23, 26, 87, 120, 613, 998
AclWI GGATC 3 cut(s) 5, 688, 701
AcoI YGGCCR 2 cut(s) 88, 213
AcsI RAATTY 3 cut(s) 52, 539, 1315
AfaI GTAC 5 cut(s) 126, 239, 552, 778, 1029
AfiI CCNNNNNNNGG 4 cut(s) 149, 772, 1245, 1360
AflIII ACRYGT 1 cut(s) 1015
AgsI TTSAA 5 cut(s) 319, 713, 739, 1042, 1469
AhlI ACTAGT 1 cut(s) 805
AjiI CACGTC 2 cut(s) 186, 1289
AluBI AGCT 9 cut(s) 146, 352, 500, 629, 797, 857, 1064, 1187, 1376
AluI AGCT 9 cut(s) 146, 352, 500, 629, 797, 857, 1064, 1187, 1376
Alw26I GTCTC 5 cut(s) 488, 1024, 1087, 1442, 1472
AlwI GGATC 3 cut(s) 5, 688, 701
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 4 cut(s) 3, 88, 213, 312
ApeKI GCWGC 3 cut(s) 473, 965, 1322
ApoI RAATTY 3 cut(s) 52, 539, 1315
Asp700I GAANNNNTTC 1 cut(s) 1266
AspLEI GCGC 3 cut(s) 435, 707, 1333
AspS9I GGNCC 1 cut(s) 1235
AsuHPI GGTGA 5 cut(s) 436, 675, 800, 854, 1348
AvaI CYCGRG 1 cut(s) 14
AvaII GGWCC 1 cut(s) 1235
BamHI GGATCC 1 cut(s) 693
BanI GGYRCC 2 cut(s) 179, 290
BauI CACGAG 1 cut(s) 899
BbvI GCAGC 3 cut(s) 460, 952, 1309
BccI CCATC 2 cut(s) 684, 1117
BceAI ACGGC 2 cut(s) 1166, 1394
BcgI CGANNNNNNTGC 2 cut(s) 183, 217
BcoDI GTCTC 5 cut(s) 488, 1024, 1087, 1442, 1472
BcuI ACTAGT 1 cut(s) 805
BfaI CTAG 5 cut(s) 401, 630, 687, 806, 1358
BfmI CTRYAG 1 cut(s) 366
BfuAI ACCTGC 1 cut(s) 557
BisI GCNGC 7 cut(s) 26, 88, 120, 474, 966, 999, 1323
BlsI GCNGC 7 cut(s) 27, 89, 121, 475, 967, 1000, 1324
BmcAI AGTACT 3 cut(s) 126, 552, 1029
Bme18I GGWCC 1 cut(s) 1235
BmeT110I CYCGRG 1 cut(s) 14
BmgBI CACGTC 2 cut(s) 186, 1289
BmgT120I GGNCC 1 cut(s) 1235
BmiI GGNNCC 4 cut(s) 181, 292, 695, 1237
BmsI GCATC 5 cut(s) 60, 807, 977, 1010, 1424
BplI GAGNNNNNCTC 2 cut(s) 1081, 1113
BpmI CTGGAG 1 cut(s) 1077
Bpu10I CCTNAGC 1 cut(s) 770
BsaBI GATNNNNATC 1 cut(s) 1127
BsaI GGTCTC 2 cut(s) 1087, 1472
BsaJI CCNNGG 1 cut(s) 1410
BsaXI ACNNNNNCTCC 4 cut(s) 618, 648, 1050, 1080
Bsc4I CCNNNNNNNGG 4 cut(s) 149, 772, 1245, 1360
Bse1I ACTGG 3 cut(s) 273, 465, 1060
Bse3DI GCAATG 2 cut(s) 321, 471
Bse8I GATNNNNATC 1 cut(s) 1127
BseDI CCNNGG 1 cut(s) 1410
BseGI GGATG 1 cut(s) 1128
BseJI GATNNNNATC 1 cut(s) 1127
BseLI CCNNNNNNNGG 4 cut(s) 149, 772, 1245, 1360
BseMI GCAATG 2 cut(s) 321, 471
BseMII CTCAG 2 cut(s) 483, 1008
BseNI ACTGG 3 cut(s) 273, 465, 1060
BseRI GAGGAG 1 cut(s) 1105
BseXI GCAGC 3 cut(s) 460, 952, 1309
BseYI CCCAGC 2 cut(s) 142, 1369
BsgI GTGCAG 3 cut(s) 786, 930, 1005
Bsh1236I CGCG 4 cut(s) 28, 435, 705, 1017
BshFI GGCC 4 cut(s) 5, 90, 215, 314
BshNI GGYRCC 2 cut(s) 179, 290
BsiHKCI CYCGRG 1 cut(s) 14
BsiSI CCGG 1 cut(s) 766
BslFI GGGAC 3 cut(s) 620, 1221, 1427
BslI CCNNNNNNNGG 4 cut(s) 149, 772, 1245, 1360
BsmAI GTCTC 5 cut(s) 488, 1024, 1087, 1442, 1472
BsmBI CGTCTC 1 cut(s) 1024
BsmFI GGGAC 3 cut(s) 620, 1221, 1427
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 4 cut(s) 5, 90, 215, 314
Bso31I GGTCTC 2 cut(s) 1087, 1472
BsoBI CYCGRG 1 cut(s) 14
Bsp143I GATC 4 cut(s) 10, 693, 903, 933
BspACI CCGC 6 cut(s) 23, 26, 87, 120, 613, 998
BspANI GGCC 4 cut(s) 5, 90, 215, 314
BspCNI CTCAG 2 cut(s) 484, 1007
BspFNI CGCG 4 cut(s) 28, 435, 705, 1017
BspHI TCATGA 1 cut(s) 1251
BspLI GGNNCC 4 cut(s) 181, 292, 695, 1237
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 3 cut(s) 5, 688, 701
BspT107I GGYRCC 2 cut(s) 179, 290
BspTNI GGTCTC 2 cut(s) 1087, 1472
BsrDI GCAATG 2 cut(s) 321, 471
BsrI ACTGG 3 cut(s) 273, 465, 1060
BssECI CCNNGG 1 cut(s) 1410
BssMI GATC 4 cut(s) 10, 693, 903, 933
BssSI CACGAG 1 cut(s) 899
Bst2BI CACGAG 1 cut(s) 899
Bst4CI ACNGT 1 cut(s) 162
Bst6I CTCTTC 3 cut(s) 81, 840, 1166
BstAPI GCANNNNNTGC 1 cut(s) 470
BstC8I GCNNGC 3 cut(s) 312, 471, 1203
BstDEI CTNAG 5 cut(s) 492, 770, 865, 994, 1295
BstDSI CCRYGG 1 cut(s) 1410
BstF5I GGATG 1 cut(s) 1128
BstFNI CGCG 4 cut(s) 28, 435, 705, 1017
BstHHI GCGC 3 cut(s) 435, 707, 1333
BstKTI GATC 4 cut(s) 13, 696, 906, 936
BstMAI GTCTC 5 cut(s) 488, 1024, 1087, 1442, 1472
BstMBI GATC 4 cut(s) 10, 693, 903, 933
BstMWI GCNNNNNNNGC 7 cut(s) 25, 470, 497, 1007, 1193, 1202, 1328
BstNSI RCATGY 1 cut(s) 473
BstSFI CTRYAG 1 cut(s) 366
BstUI CGCG 4 cut(s) 28, 435, 705, 1017
BstV1I GCAGC 3 cut(s) 460, 952, 1309
BstX2I RGATCY 1 cut(s) 693
BstYI RGATCY 1 cut(s) 693
BsuRI GGCC 4 cut(s) 5, 90, 215, 314
BtgI CCRYGG 1 cut(s) 1410
BtgZI GCGATG 1 cut(s) 75
BtrI CACGTC 2 cut(s) 186, 1289
BtsCI GGATG 1 cut(s) 1128
BtsI GCAGTG 2 cut(s) 1196, 1311
BtsIMutI CAGTG 3 cut(s) 280, 1196, 1311
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 3 cut(s) 312, 471, 1203
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 1251
CfoI GCGC 3 cut(s) 435, 707, 1333
Cfr13I GGNCC 1 cut(s) 1235
CseI GACGC 2 cut(s) 1006, 1016
Csp6I GTAC 5 cut(s) 125, 238, 551, 777, 1028
CspCI CAANNNNNGTGG 2 cut(s) 1392, 1427
CviAII CATG 7 cut(s) 41, 234, 470, 481, 878, 1252, 1365
CviQI GTAC 5 cut(s) 125, 238, 551, 777, 1028
DdeI CTNAG 5 cut(s) 492, 770, 865, 994, 1295
DpnI GATC 4 cut(s) 12, 695, 905, 935
DpnII GATC 4 cut(s) 10, 693, 903, 933
EaeI YGGCCR 2 cut(s) 88, 213
Eam1104I CTCTTC 3 cut(s) 81, 840, 1166
EarI CTCTTC 3 cut(s) 81, 840, 1166
Eco31I GGTCTC 2 cut(s) 1087, 1472
Eco32I GATATC 1 cut(s) 1257
Eco47I GGWCC 1 cut(s) 1235
Eco88I CYCGRG 1 cut(s) 14
EcoRI GAATTC 2 cut(s) 52, 539
EcoRV GATATC 1 cut(s) 1257
EcoT22I ATGCAT 2 cut(s) 471, 1490
Esp3I CGTCTC 1 cut(s) 1024
FaeI CATG 7 cut(s) 44, 237, 473, 484, 881, 1255, 1368
FaqI GGGAC 3 cut(s) 620, 1221, 1427
FatI CATG 7 cut(s) 40, 233, 469, 480, 877, 1251, 1364
FauNDI CATATG 1 cut(s) 1207
FblI GTMKAC 2 cut(s) 520, 810
Fnu4HI GCNGC 7 cut(s) 26, 88, 120, 474, 966, 999, 1323
FokI GGATG 1 cut(s) 1135
Fsp4HI GCNGC 7 cut(s) 26, 88, 120, 474, 966, 999, 1323
FspBI CTAG 5 cut(s) 401, 630, 687, 806, 1358
GlaI GCGC 3 cut(s) 434, 706, 1332
GluI GCNGC 7 cut(s) 26, 88, 120, 474, 966, 999, 1323
GsaI CCCAGC 2 cut(s) 146, 1373
GsuI CTGGAG 1 cut(s) 1077
HaeIII GGCC 4 cut(s) 5, 90, 215, 314
HapII CCGG 1 cut(s) 766
HgaI GACGC 2 cut(s) 1006, 1016
HhaI GCGC 3 cut(s) 435, 707, 1333
Hin1II CATG 7 cut(s) 44, 237, 473, 484, 881, 1255, 1368
Hin6I GCGC 3 cut(s) 433, 705, 1331
HinP1I GCGC 3 cut(s) 433, 705, 1331
HincII GTYRAC 1 cut(s) 521
HindII GTYRAC 1 cut(s) 521
HinfI GANTC 4 cut(s) 209, 680, 791, 990
HpaII CCGG 1 cut(s) 766
HphI GGTGA 5 cut(s) 436, 675, 800, 854, 1348
Hpy166II GTNNAC 3 cut(s) 521, 811, 1292
Hpy188I TCNGA 8 cut(s) 10, 51, 69, 100, 510, 557, 1006, 1261
Hpy188III TCNNGA 7 cut(s) 14, 901, 979, 1252, 1358, 1466, 1477
Hpy8I GTNNAC 3 cut(s) 521, 811, 1292
HpyAV CCTTC 4 cut(s) 325, 333, 707, 844
HpyCH4III ACNGT 1 cut(s) 162
HpyCH4IV ACGT 2 cut(s) 185, 1288
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 470, 497, 1007, 1193, 1202, 1328
HpyF3I CTNAG 5 cut(s) 492, 770, 865, 994, 1295
HpySE526I ACGT 2 cut(s) 185, 1288
Hsp92II CATG 7 cut(s) 44, 237, 473, 484, 881, 1255, 1368
HspAI GCGC 3 cut(s) 433, 705, 1331
Kzo9I GATC 4 cut(s) 10, 693, 903, 933
LmnI GCTCC 7 cut(s) 349, 481, 505, 626, 802, 1373, 1400
Lsp1109I GCAGC 3 cut(s) 460, 952, 1309
LweI GCATC 5 cut(s) 60, 807, 977, 1010, 1424
MaeI CTAG 5 cut(s) 401, 630, 687, 806, 1358
MaeII ACGT 2 cut(s) 185, 1288
MaeIII GTNAC 3 cut(s) 391, 681, 1336
MalI GATC 4 cut(s) 12, 695, 905, 935
MboI GATC 4 cut(s) 10, 693, 903, 933
MboII GAAGA 6 cut(s) 24, 68, 857, 1153, 1426, 1481
MflI RGATCY 1 cut(s) 693
MluI ACGCGT 1 cut(s) 1015
MlyI GAGTC 2 cut(s) 218, 689
MmeI TCCRAC 1 cut(s) 952
Mph1103I ATGCAT 2 cut(s) 471, 1490
MroXI GAANNNNTTC 1 cut(s) 1266
MseI TTAA 4 cut(s) 81, 221, 534, 1280
MslI CAYNNNNRTG 2 cut(s) 688, 1304
MspA1I CMGCKG 1 cut(s) 998
MspI CCGG 1 cut(s) 766
Mva1269I GAATGC 1 cut(s) 1333
MvnI CGCG 4 cut(s) 28, 435, 705, 1017
MwoI GCNNNNNNNGC 7 cut(s) 25, 470, 497, 1007, 1193, 1202, 1328
NdeI CATATG 1 cut(s) 1207
NdeII GATC 4 cut(s) 10, 693, 903, 933
NlaIII CATG 7 cut(s) 44, 237, 473, 484, 881, 1255, 1368
NlaIV GGNNCC 4 cut(s) 181, 292, 695, 1237
NmuCI GTSAC 2 cut(s) 681, 1336
NsiI ATGCAT 2 cut(s) 471, 1490
NspI RCATGY 1 cut(s) 473
PaeI GCATGC 1 cut(s) 473
PagI TCATGA 1 cut(s) 1251
PcsI WCGNNNNNNNCGW 1 cut(s) 1014
PctI GAATGC 1 cut(s) 1333
PdmI GAANNNNTTC 1 cut(s) 1266
PfeI GAWTC 2 cut(s) 791, 990
PflMI CCANNNNNTGG 2 cut(s) 149, 1245
PkrI GCNGC 7 cut(s) 27, 89, 121, 475, 967, 1000, 1324
PleI GAGTC 2 cut(s) 217, 688
PpsI GAGTC 2 cut(s) 217, 688
PsiI TTATAA 1 cut(s) 269
PspFI CCCAGC 2 cut(s) 142, 1369
PspN4I GGNNCC 4 cut(s) 181, 292, 695, 1237
PspPI GGNCC 1 cut(s) 1235
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 1 cut(s) 693
RsaI GTAC 5 cut(s) 126, 239, 552, 778, 1029
RsaNI GTAC 5 cut(s) 125, 238, 551, 777, 1028
RseI CAYNNNNRTG 2 cut(s) 688, 1304
SalI GTCGAC 1 cut(s) 519
SaqAI TTAA 4 cut(s) 81, 221, 534, 1280
SatI GCNGC 7 cut(s) 26, 88, 120, 474, 966, 999, 1323
Sau3AI GATC 4 cut(s) 10, 693, 903, 933
Sau96I GGNCC 1 cut(s) 1235
ScaI AGTACT 3 cut(s) 126, 552, 1029
SchI GAGTC 2 cut(s) 218, 689
SfaNI GCATC 5 cut(s) 60, 807, 977, 1010, 1424
SfcI CTRYAG 1 cut(s) 366
SinI GGWCC 1 cut(s) 1235
SmiMI CAYNNNNRTG 2 cut(s) 688, 1304
SpeI ACTAGT 1 cut(s) 805
SphI GCATGC 1 cut(s) 473
SsiI CCGC 6 cut(s) 23, 26, 87, 120, 613, 998
SspI AATATT 1 cut(s) 1266
SspMI CTAG 5 cut(s) 401, 630, 687, 806, 1358
TaaI ACNGT 1 cut(s) 162
TaiI ACGT 2 cut(s) 188, 1291
TaqI TCGA 2 cut(s) 520, 1476
TatI WGTACW 3 cut(s) 124, 550, 1027
TauI GCSGC 4 cut(s) 28, 90, 122, 1001
TfiI GAWTC 2 cut(s) 791, 990
Tru1I TTAA 4 cut(s) 81, 221, 534, 1280
Tru9I TTAA 4 cut(s) 81, 221, 534, 1280
TscAI CASTG 3 cut(s) 280, 1203, 1311
TseFI GTSAC 2 cut(s) 681, 1336
TseI GCWGC 3 cut(s) 473, 965, 1322
Tsp45I GTSAC 2 cut(s) 681, 1336
TspDTI ATGAA 6 cut(s) 743, 840, 866, 1335, 1417, 1426
TspRI CASTG 3 cut(s) 280, 1203, 1311
Van91I CCANNNNNTGG 2 cut(s) 149, 1245
VpaK11BI GGWCC 1 cut(s) 1235
XapI RAATTY 3 cut(s) 52, 539, 1315
XbaI TCTAGA 1 cut(s) 1357
XceI RCATGY 1 cut(s) 473
XmiI GTMKAC 2 cut(s) 520, 810
XmnI GAANNNNTTC 1 cut(s) 1266
XspI CTAG 5 cut(s) 401, 630, 687, 806, 1358
ZrmI AGTACT 3 cut(s) 126, 552, 1029
Zsp2I ATGCAT 2 cut(s) 471, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.