pycom07g28050
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
27537763 .. 27541317
3555 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g28050.10

Sequence Viewer

Length: 1506 bp
ATGGAGTCCGATCCTGAGCAACACGCGCCCTCTTCTCTCGGAAAGGTGGGGAAATCTTCAGGTGAAATTGGCGACGCACAGGAGCCACTTCTTGATGGGGCTCACAATTCAGAAAACTATTCTCTTATTGCCGCAATCCTACCATTTCTATTCCCAGCTTTTGGAGGACTACTATATGGCTATGATATTGGCGCAACATCATGTGCTACAATCTCAATAGAGTCGGCCACATTAAGCGGAGTATCATGGTACAACTTGTCATCTGTGGAAATTGGTCTCATAACTAGTGGCTCATTATATGGGGCCTTGATTGGATCTTTGCTGGCCTTTAACGTTGCTGACTTCTTAGGAAGAAGGAGGGAGTTGATTTTGGCTGCTTTATTGTATCTTCTTGGAGGCCTAGTAACAGCATTAGCACCCGACTTGCCTGTTATGGTGATTGGACGCTTCATATATGGTATAGGAATTGGACTGGCAATGCATGCGGCTCCGATGTATATTGCCGAGACAGCTCCAAGTGCAATACGAGGTCGCTTAATATCGCTCAAAGAGTTCTTCATAGTGCTTGGGATGGTTGCGGGTTATGGAATTGGTAGCCTTTTAGTTGACACAGTAGCTGGTTGGCGCTACATGTATGGAATTACTGGCCCTTTAGCAATAATTATGGGTATCGGAATGTGGTGGCTACCAGCATCACCCAGATGGATCCTTCTACGTGCCATTCAGGGAAGAGGGAATATGGATGAGTTAAAATTGACTGCAATCAGTTGCTTGTGCCGGCTTAGGGGTAGTGCTATTGGTGATTCAGCTCCTGCACAAGTAGATGAGATGCTGGTTGAGCTTGCTTATGTTGGTGACGAGAAAGAAGCCACATTAGGGGAGATGTTTCATGGAAAATGCTTGAAAGCCCTTGTGATTGGTGCTGGATTGGTCTTGTTCCAACAGATCACAGGGCAACCAAGTGTGCTGTACTATGCTGCATCGATTTTTCAGAGTGCAGGATTCTCTGAAGCATCTGATGCAACACGGGTCTCAATTTTACTTGGTGTTTTCAAGTTAATAATGACTGGAGCAGCTGTTCTTGTTGTTGATAGACTCGGGAGGAGACCTCTACTACTTGGAGGTGTTACGGGGATGGTCATCTCATTATTCCTTTTGGGATCATATTACCTTTTCTTTGATGATGCACCGGTTGCAGCTGTAGTTGCACTGATGTTGTATGTTGGATGTTATCAGATATCTTTCGGTCCCATTGGTTGGCTAATGATATCAGAAGTATTCCCCTTACGGTTAAGGGGACGAGGACTCAGTATAGCAGTGCTTGTGAATTTTGCTGCAAATGCACTGGTGACATTTGCATTTTCTCCTCTAAAGGCATTGCTGGGAGCTGGAATATTGTTTTATGTATTTGGAGTAATAGCAGTGGCATCTCTACTTTTCATTTTCTTCATCGTCCCAGAGACCAAGGGGCTTACTCTTGAGGAAATTGAGGCCAAGTGCCTTTAG

Protein Analysis

502

Amino Acids

53.19

Weight (kDa)

5.28

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 161, 1257
AccII CGCG 1 cut(s) 26
AciI CCGC 4 cut(s) 132, 237, 485, 578
AclI AACGTT 1 cut(s) 333
AclWI GGATC 5 cut(s) 5, 322, 700, 713, 1168
AcoI YGGCCR 1 cut(s) 225
AcsI RAATTY 1 cut(s) 1327
AcuI CTGAAG 2 cut(s) 42, 1029
AfaI GTAC 2 cut(s) 251, 971
AfiI CCNNNNNNNGG 4 cut(s) 161, 784, 876, 1257
AflIII ACRYGT 1 cut(s) 630
AgeI ACCGGT 1 cut(s) 1189
AgsI TTSAA 2 cut(s) 904, 1054
AhlI ACTAGT 1 cut(s) 284
AloI GAACNNNNNNTCC 2 cut(s) 1062, 1094
AluBI AGCT 8 cut(s) 158, 512, 617, 809, 841, 1076, 1199, 1388
AluI AGCT 8 cut(s) 158, 512, 617, 809, 841, 1076, 1199, 1388
Alw26I GTCTC 5 cut(s) 281, 500, 1036, 1099, 1454
AlwI GGATC 5 cut(s) 5, 322, 700, 713, 1168
AlwNI CAGNNNCTG 2 cut(s) 617, 812
Ama87I CYCGRG 1 cut(s) 1097
AoxI GGCC 6 cut(s) 225, 303, 324, 397, 646, 1491
ApeKI GCWGC 5 cut(s) 374, 977, 1073, 1196, 1334
ApoI RAATTY 1 cut(s) 1327
AsiGI ACCGGT 1 cut(s) 1189
AspLEI GCGC 3 cut(s) 28, 194, 627
AspS9I GGNCC 3 cut(s) 303, 647, 1247
AsuHPI GGTGA 6 cut(s) 74, 448, 687, 812, 866, 1360
AvaI CYCGRG 1 cut(s) 1097
AvaII GGWCC 1 cut(s) 1247
BamHI GGATCC 1 cut(s) 705
BanII GRGCYC 1 cut(s) 103
BbvI GCAGC 5 cut(s) 361, 964, 1085, 1208, 1321
BccI CCATC 4 cut(s) 89, 565, 696, 1129
BcoDI GTCTC 5 cut(s) 281, 500, 1036, 1099, 1454
BcuI ACTAGT 1 cut(s) 284
BfaI CTAG 2 cut(s) 285, 401
BfmI CTRYAG 1 cut(s) 1200
BfoI RGCGCY 1 cut(s) 628
BisI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
BlsI GCNGC 7 cut(s) 133, 376, 487, 979, 1075, 1198, 1336
Bme18I GGWCC 1 cut(s) 1247
BmeT110I CYCGRG 1 cut(s) 1097
BmgT120I GGNCC 3 cut(s) 303, 647, 1247
BmiI GGNNCC 5 cut(s) 84, 304, 489, 707, 1249
BmsI GCATC 7 cut(s) 701, 819, 989, 1009, 1022, 1174, 1436
BplI GAGNNNNNCTC 2 cut(s) 1093, 1125
BpmI CTGGAG 1 cut(s) 1089
Bpu10I CCTNAGC 2 cut(s) 15, 782
BpuEI CTTGAG 1 cut(s) 1499
Bsa29I ATCGAT 1 cut(s) 983
BsaAI YACGTR 1 cut(s) 716
BsaBI GATNNNNATC 1 cut(s) 1139
BsaI GGTCTC 4 cut(s) 281, 1036, 1099, 1454
BsaJI CCNNGG 1 cut(s) 1464
BsaWI WCCGGW 1 cut(s) 1189
BsaXI ACNNNNNCTCC 4 cut(s) 387, 417, 1062, 1092
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 784, 876, 1257
Bse118I RCCGGY 2 cut(s) 777, 1189
Bse1I ACTGG 4 cut(s) 477, 649, 1072, 1350
Bse3DI GCAATG 2 cut(s) 483, 1376
Bse8I GATNNNNATC 1 cut(s) 1139
BseCI ATCGAT 1 cut(s) 983
BseDI CCNNGG 1 cut(s) 1464
BseGI GGATG 4 cut(s) 576, 748, 1140, 1232
BseJI GATNNNNATC 1 cut(s) 1139
BseLI CCNNNNNNNGG 4 cut(s) 161, 784, 876, 1257
BseMI GCAATG 2 cut(s) 483, 1376
BseMII CTCAG 2 cut(s) 6, 1321
BseNI ACTGG 4 cut(s) 477, 649, 1072, 1350
BseRI GAGGAG 2 cut(s) 1117, 1356
BseXI GCAGC 5 cut(s) 361, 964, 1085, 1208, 1321
BseYI CCCAGC 2 cut(s) 154, 1381
BsgI GTGCAG 2 cut(s) 798, 1017
Bsh1236I CGCG 1 cut(s) 26
BshFI GGCC 6 cut(s) 227, 305, 326, 399, 648, 1493
BshTI ACCGGT 1 cut(s) 1189
BshVI ATCGAT 1 cut(s) 983
BsiHKCI CYCGRG 1 cut(s) 1097
BsiSI CCGG 2 cut(s) 778, 1190
BslFI GGGAC 3 cut(s) 1233, 1311, 1439
BslI CCNNNNNNNGG 4 cut(s) 161, 784, 876, 1257
BsmAI GTCTC 5 cut(s) 281, 500, 1036, 1099, 1454
BsmFI GGGAC 3 cut(s) 1233, 1311, 1439
BsnI GGCC 6 cut(s) 227, 305, 326, 399, 648, 1493
Bso31I GGTCTC 4 cut(s) 281, 1036, 1099, 1454
BsoBI CYCGRG 1 cut(s) 1097
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 5 cut(s) 10, 314, 705, 945, 1160
BspACI CCGC 4 cut(s) 132, 237, 485, 578
BspANI GGCC 6 cut(s) 227, 305, 326, 399, 648, 1493
BspCNI CTCAG 2 cut(s) 7, 1320
BspDI ATCGAT 1 cut(s) 983
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 5 cut(s) 84, 304, 489, 707, 1249
BspPI GGATC 5 cut(s) 5, 322, 700, 713, 1168
BspTNI GGTCTC 4 cut(s) 281, 1036, 1099, 1454
BsrDI GCAATG 2 cut(s) 483, 1376
BsrFI RCCGGY 2 cut(s) 777, 1189
BsrI ACTGG 4 cut(s) 477, 649, 1072, 1350
BssAI RCCGGY 2 cut(s) 777, 1189
BssECI CCNNGG 1 cut(s) 1464
BssMI GATC 5 cut(s) 10, 314, 705, 945, 1160
BssT1I CCWWGG 1 cut(s) 1464
Bst4CI ACNGT 2 cut(s) 613, 1290
Bst6I CTCTTC 2 cut(s) 37, 724
BstAPI GCANNNNNTGC 3 cut(s) 482, 1019, 1193
BstBAI YACGTR 1 cut(s) 716
BstC8I GCNNGC 4 cut(s) 324, 483, 779, 843
BstDEI CTNAG 4 cut(s) 15, 346, 782, 1307
BstF5I GGATG 4 cut(s) 576, 748, 1140, 1232
BstFNI CGCG 1 cut(s) 26
BstH2I RGCGCY 1 cut(s) 628
BstHHI GCGC 3 cut(s) 28, 194, 627
BstKTI GATC 5 cut(s) 13, 317, 708, 948, 1163
BstMAI GTCTC 5 cut(s) 281, 500, 1036, 1099, 1454
BstMBI GATC 5 cut(s) 10, 314, 705, 945, 1160
BstMWI GCNNNNNNNGC 9 cut(s) 25, 482, 509, 518, 838, 1019, 1193, 1205, 1340
BstNSI RCATGY 2 cut(s) 485, 634
BstSFI CTRYAG 1 cut(s) 1200
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 5 cut(s) 361, 964, 1085, 1208, 1321
BstX2I RGATCY 2 cut(s) 314, 705
BstYI RGATCY 2 cut(s) 314, 705
Bsu15I ATCGAT 1 cut(s) 983
BsuRI GGCC 6 cut(s) 227, 305, 326, 399, 648, 1493
BsuTUI ATCGAT 1 cut(s) 983
BtsCI GGATG 4 cut(s) 576, 748, 1140, 1232
BtsI GCAGTG 2 cut(s) 1323, 1428
BtsIMutI CAGTG 4 cut(s) 1208, 1323, 1343, 1428
Cac8I GCNNGC 4 cut(s) 324, 483, 779, 843
CaiI CAGNNNCTG 2 cut(s) 617, 812
CfoI GCGC 3 cut(s) 28, 194, 627
Cfr10I RCCGGY 2 cut(s) 777, 1189
Cfr13I GGNCC 3 cut(s) 303, 647, 1247
ClaI ATCGAT 1 cut(s) 983
CseI GACGC 2 cut(s) 83, 453
Csp6I GTAC 2 cut(s) 250, 970
CspAI ACCGGT 1 cut(s) 1189
CviAII CATG 5 cut(s) 201, 246, 482, 631, 890
CviQI GTAC 2 cut(s) 250, 970
DdeI CTNAG 4 cut(s) 15, 346, 782, 1307
DpnI GATC 5 cut(s) 12, 316, 707, 947, 1162
DpnII GATC 5 cut(s) 10, 314, 705, 945, 1160
EaeI YGGCCR 1 cut(s) 225
Eam1104I CTCTTC 2 cut(s) 37, 724
EarI CTCTTC 2 cut(s) 37, 724
Eco130I CCWWGG 1 cut(s) 1464
Eco147I AGGCCT 1 cut(s) 399
Eco24I GRGCYC 1 cut(s) 103
Eco31I GGTCTC 4 cut(s) 281, 1036, 1099, 1454
Eco32I GATATC 2 cut(s) 1239, 1269
Eco47I GGWCC 1 cut(s) 1247
Eco57I CTGAAG 2 cut(s) 42, 1029
Eco88I CYCGRG 1 cut(s) 1097
EcoO109I RGGNCCY 1 cut(s) 303
EcoRV GATATC 2 cut(s) 1239, 1269
EcoT14I CCWWGG 1 cut(s) 1464
EcoT22I ATGCAT 1 cut(s) 483
EcoT38I GRGCYC 1 cut(s) 103
ErhI CCWWGG 1 cut(s) 1464
FaeI CATG 5 cut(s) 204, 249, 485, 634, 893
FaqI GGGAC 3 cut(s) 1233, 1311, 1439
FatI CATG 5 cut(s) 200, 245, 481, 630, 889
FauI CCCGC 1 cut(s) 571
Fnu4HI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
FokI GGATG 4 cut(s) 583, 755, 1147, 1239
FriOI GRGCYC 1 cut(s) 103
Fsp4HI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
FspBI CTAG 2 cut(s) 285, 401
GlaI GCGC 3 cut(s) 27, 193, 626
GluI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
GsaI CCCAGC 2 cut(s) 158, 1385
GsuI CTGGAG 1 cut(s) 1089
HaeII RGCGCY 1 cut(s) 628
HaeIII GGCC 6 cut(s) 227, 305, 326, 399, 648, 1493
HapII CCGG 2 cut(s) 778, 1190
HgaI GACGC 2 cut(s) 83, 453
HhaI GCGC 3 cut(s) 28, 194, 627
Hin1II CATG 5 cut(s) 204, 249, 485, 634, 893
Hin6I GCGC 3 cut(s) 26, 192, 625
HinP1I GCGC 3 cut(s) 26, 192, 625
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HinfI GANTC 6 cut(s) 5, 221, 803, 1002, 1095, 1305
HpaII CCGG 2 cut(s) 778, 1190
HphI GGTGA 6 cut(s) 74, 448, 687, 812, 866, 1360
Hpy166II GTNNAC 1 cut(s) 607
Hpy188III TCNNGA 4 cut(s) 14, 92, 1099, 1478
Hpy8I GTNNAC 1 cut(s) 607
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 2 cut(s) 348, 719
HpyCH4III ACNGT 2 cut(s) 613, 1290
HpyCH4IV ACGT 2 cut(s) 333, 715
HpyF10VI GCNNNNNNNGC 9 cut(s) 25, 482, 509, 518, 838, 1019, 1193, 1205, 1340
HpyF3I CTNAG 4 cut(s) 15, 346, 782, 1307
HpySE526I ACGT 2 cut(s) 333, 715
Hsp92II CATG 5 cut(s) 204, 249, 485, 634, 893
HspAI GCGC 3 cut(s) 26, 192, 625
KroI GCCGGC 1 cut(s) 777
KroNI GCCGGC 1 cut(s) 779
Kzo9I GATC 5 cut(s) 10, 314, 705, 945, 1160
LmnI GCTCC 6 cut(s) 82, 493, 517, 814, 1070, 1385
Lsp1109I GCAGC 5 cut(s) 361, 964, 1085, 1208, 1321
LweI GCATC 7 cut(s) 701, 819, 989, 1009, 1022, 1174, 1436
MaeI CTAG 2 cut(s) 285, 401
MaeII ACGT 2 cut(s) 333, 715
MaeIII GTNAC 4 cut(s) 403, 854, 1126, 1348
MalI GATC 5 cut(s) 12, 316, 707, 947, 1162
MboI GATC 5 cut(s) 10, 314, 705, 945, 1160
MboII GAAGA 7 cut(s) 24, 48, 363, 380, 547, 741, 1438
MflI RGATCY 2 cut(s) 314, 705
MhlI GDGCHC 1 cut(s) 103
MlyI GAGTC 4 cut(s) 14, 230, 1089, 1299
MmeI TCCRAC 2 cut(s) 964, 1204
Mph1103I ATGCAT 1 cut(s) 483
MroNI GCCGGC 1 cut(s) 777
MseI TTAA 6 cut(s) 233, 330, 536, 749, 1058, 1292
MslI CAYNNNNRTG 1 cut(s) 700
MspA1I CMGCKG 2 cut(s) 1076, 1199
MspI CCGG 2 cut(s) 778, 1190
MvnI CGCG 1 cut(s) 26
MwoI GCNNNNNNNGC 9 cut(s) 25, 482, 509, 518, 838, 1019, 1193, 1205, 1340
NaeI GCCGGC 1 cut(s) 779
NdeII GATC 5 cut(s) 10, 314, 705, 945, 1160
NgoMIV GCCGGC 1 cut(s) 777
NlaIII CATG 5 cut(s) 204, 249, 485, 634, 893
NlaIV GGNNCC 5 cut(s) 84, 304, 489, 707, 1249
NmeAIII GCCGAG 1 cut(s) 529
NmuCI GTSAC 2 cut(s) 854, 1348
NsiI ATGCAT 1 cut(s) 483
NspI RCATGY 2 cut(s) 485, 634
PaeI GCATGC 1 cut(s) 485
PceI AGGCCT 1 cut(s) 399
PciI ACATGT 1 cut(s) 630
PdiI GCCGGC 1 cut(s) 779
PfeI GAWTC 2 cut(s) 803, 1002
PflMI CCANNNNNTGG 2 cut(s) 161, 1257
PinAI ACCGGT 1 cut(s) 1189
PkrI GCNGC 7 cut(s) 133, 376, 487, 979, 1075, 1198, 1336
PleI GAGTC 4 cut(s) 13, 229, 1089, 1299
PpsI GAGTC 4 cut(s) 13, 229, 1089, 1299
Ppu21I YACGTR 1 cut(s) 716
PscI ACATGT 1 cut(s) 630
Psp1406I AACGTT 1 cut(s) 333
PspFI CCCAGC 2 cut(s) 154, 1381
PspN4I GGNNCC 5 cut(s) 84, 304, 489, 707, 1249
PspPI GGNCC 3 cut(s) 303, 647, 1247
PstNI CAGNNNCTG 2 cut(s) 617, 812
PsuI RGATCY 2 cut(s) 314, 705
PvuII CAGCTG 2 cut(s) 1076, 1199
RsaI GTAC 2 cut(s) 251, 971
RsaNI GTAC 2 cut(s) 250, 970
RseI CAYNNNNRTG 1 cut(s) 700
SaqAI TTAA 6 cut(s) 233, 330, 536, 749, 1058, 1292
SatI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
Sau3AI GATC 5 cut(s) 10, 314, 705, 945, 1160
Sau96I GGNCC 3 cut(s) 303, 647, 1247
SchI GAGTC 4 cut(s) 14, 230, 1089, 1299
SduI GDGCHC 1 cut(s) 103
SfaNI GCATC 7 cut(s) 701, 819, 989, 1009, 1022, 1174, 1436
SfcI CTRYAG 1 cut(s) 1200
SinI GGWCC 1 cut(s) 1247
SmiMI CAYNNNNRTG 1 cut(s) 700
SmlI CTYRAG 1 cut(s) 1478
SmoI CTYRAG 1 cut(s) 1478
SpeI ACTAGT 1 cut(s) 284
SphI GCATGC 1 cut(s) 485
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 4 cut(s) 132, 237, 485, 578
SspI AATATT 1 cut(s) 1395
SspMI CTAG 2 cut(s) 285, 401
StuI AGGCCT 1 cut(s) 399
StyI CCWWGG 1 cut(s) 1464
TaaI ACNGT 2 cut(s) 613, 1290
TaiI ACGT 2 cut(s) 336, 718
TaqI TCGA 1 cut(s) 983
TaqII GACCGA 1 cut(s) 1235
TatI WGTACW 1 cut(s) 969
TauI GCSGC 2 cut(s) 134, 488
TfiI GAWTC 2 cut(s) 803, 1002
Tru1I TTAA 6 cut(s) 233, 330, 536, 749, 1058, 1292
Tru9I TTAA 6 cut(s) 233, 330, 536, 749, 1058, 1292
TscAI CASTG 4 cut(s) 1215, 1323, 1350, 1428
TseFI GTSAC 2 cut(s) 854, 1348
TseI GCWGC 5 cut(s) 374, 977, 1073, 1196, 1334
Tsp45I GTSAC 2 cut(s) 854, 1348
TspDTI ATGAA 5 cut(s) 439, 547, 878, 1429, 1438
TspRI CASTG 4 cut(s) 1215, 1323, 1350, 1428
Van91I CCANNNNNTGG 2 cut(s) 161, 1257
VpaK11BI GGWCC 1 cut(s) 1247
XapI RAATTY 1 cut(s) 1327
XceI RCATGY 2 cut(s) 485, 634
XspI CTAG 2 cut(s) 285, 401
Zsp2I ATGCAT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.