FvH4_7g33900
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
24019580 .. 24023243
3664 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33900.t1

Sequence Viewer

Length: 1497 bp
ATGGCATCTTCTTCTTCTCTCCCACAGGTGACAAGGCTTTCAGGTTCAGGTGACATTGGTGGTGCAAAAGACCCTCTTCTTACTGGGGTGCATAAGATATCCCATAACTATTCTCTTCTTCGCGCAATATTCCCATTTTTATTCCCAGCTCTTGAAGGACTGGTATATGGCTATGATATTGGTGCCACGGCGTGTGCTACAATTTCCCTCGGGTCAGCCACATTAAGCGGAGTATCATGGTACGACTTGTCATCTCTGCAAATTGGTCTCATTGCTAGTGGCTCATTATCTGGTGCCTTGATTGGCTCTGTCCTGGCCTTCAATGCTGGTGATGTCTTAGGAAGGAGGTTTGAGTTGATTGCGTCTGCAGTATTGTATTGTATTGGAGCTCTAATAACGGCATTAGCACCTGAATTCCCTGTTATGGTGATTGGGCGCTTTGTATTTGGTGTAGGAATTGGACTGGCAATGCATGCTGCTCCTATGTATATGGCTGAGACGGCTCCAAGACAGATACGAGGTCAACTATTATCGCTCAAAGAGTTCTTTATAGTGATTGGGATGGTTGTTGGTTATGCAGTTGGTAGTGCTTTAGTGGACATATTTGGTGGTTGGCGGTATATGTATGGAGCTAGCATCCCTTTGGCAGTAATTATGGGAATTGGAATGTGGTGCCTACCGGAGTCACCTAGATGGATCCTTCTATGTGCCATACAGGGAAAAGGAAATATGCATGATTTAAAAGAGAGTGCAATACGTTGCTTGTACCGGCTTAGGGGAAAAGCTATTGGTGACTCAGCTCCTGCACTGGTAGAGGAGATGCTTGATGAGCTTTATTCTGTAGGTGAAGATAAGAAAGCTACATTAGGAGAGATGTTTCATGGGAAATGCAAGAAAGCCCTTGTCATTGGTGCAGGATTAGTTTTGTTCCAACAGATCACAGGGCAACCAAGCGTGCTGTATTATGCTGCATCAATTTTGCAGAGTGCAGGGTTTTCTGCAGCAGCTGACGCAACACGGGTCTCAATTCTGCTTGGGTTATTCAAGTTGGTAATGACTGGATCAGCTGTGCTTGTTGTTGATAGATTTGGGAGGAGACCACTTCTACTTGGAGGTGTTTCTGGGATGGTGATCTCTCTATTCATGTTGGGATCATATTACCTTTTCTTGAATGAAGCACCAGCTGTGGCTGCAATTGCACTGCTGCTCTATGTTGGGTGCTATCAGTTATCGTTTGGTCCAATTGGTTGGCTAATGATATCAGAGATCTTCCCATTAAGATTTAGAGGGCAAGGACTGAGTATAGGAGTGCTTGTGAATTTTGCTGCAAATGCACTAGTCACTCTTGCATTTTCCCCTCTAAAGGCATGGCTGGGAGCTGGACTGTTGTTTTATGTATTTGGAGCAATAGCTGTGGCATCTCTTGCTTTCATTTTCTTCATTGTCCCAGAGACAAAGGGTCTCAGTCTTGAGGAGATTGAAGAGCAATGCCTCTAG

Protein Analysis

499

Amino Acids

52.78

Weight (kDa)

7.54

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 48 - 495 2.3e-96 Sugar (and other) transporter
MFS_1 PF07690 81 - 446 4.7e-27 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 182, 293, 672
AccII CGCG 1 cut(s) 123
AciI CCGC 2 cut(s) 228, 616
AclWI GGATC 4 cut(s) 691, 704, 1069, 1159
AcsI RAATTY 2 cut(s) 413, 1318
AdeI CACNNNGTG 1 cut(s) 192
AfaI GTAC 2 cut(s) 242, 767
AfiI CCNNNNNNNGG 3 cut(s) 424, 775, 1363
AgsI TTSAA 5 cut(s) 155, 322, 1045, 1171, 1481
AhdI GACNNNNNGTC 1 cut(s) 1458
AhlI ACTAGT 1 cut(s) 1336
AjnI CCWGG 1 cut(s) 312
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 6 cut(s) 272, 491, 1027, 1090, 1445, 1466
AlwI GGATC 4 cut(s) 691, 704, 1069, 1159
AlwNI CAGNNNCTG 2 cut(s) 803, 1007
Ama87I CYCGRG 1 cut(s) 209
AoxI GGCC 1 cut(s) 315
ApeKI GCWGC 7 cut(s) 476, 968, 1001, 1004, 1190, 1204, 1325
ApoI RAATTY 2 cut(s) 413, 1318
AspLEI GCGC 2 cut(s) 125, 438
AspS9I GGNCC 1 cut(s) 1238
AsuHPI GGTGA 8 cut(s) 40, 62, 341, 439, 678, 803, 857, 1141
AsuNHI GCTAGC 1 cut(s) 632
AvaI CYCGRG 1 cut(s) 209
AvaII GGWCC 1 cut(s) 1238
BamHI GGATCC 1 cut(s) 696
BanI GGYRCC 3 cut(s) 182, 293, 672
BanII GRGCYC 1 cut(s) 391
Bbv12I GWGCWC 1 cut(s) 391
BbvI GCAGC 7 cut(s) 463, 955, 1013, 1016, 1177, 1191, 1312
BccI CCATC 3 cut(s) 556, 687, 1120
BceAI ACGGC 3 cut(s) 204, 414, 516
BciT130I CCWGG 1 cut(s) 314
BcoDI GTCTC 6 cut(s) 272, 491, 1027, 1090, 1445, 1466
BcuI ACTAGT 1 cut(s) 1336
BfaI CTAG 5 cut(s) 276, 633, 690, 1337, 1495
BfmI CTRYAG 3 cut(s) 366, 840, 999
BfoI RGCGCY 1 cut(s) 439
BglII AGATCT 1 cut(s) 1266
BisI GCNGC 7 cut(s) 477, 969, 1002, 1005, 1191, 1205, 1326
BlsI GCNGC 7 cut(s) 478, 970, 1003, 1006, 1192, 1206, 1327
Bme1390I CCNGG 1 cut(s) 314
Bme18I GGWCC 1 cut(s) 1238
BmeRI GACNNNNNGTC 1 cut(s) 1458
BmeT110I CYCGRG 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 1238
BmiI GGNNCC 5 cut(s) 184, 295, 504, 674, 698
BmrFI CCNGG 1 cut(s) 314
BmrI ACTGGG 1 cut(s) 93
BmsI GCATC 5 cut(s) 14, 645, 810, 980, 1427
BmtI GCTAGC 1 cut(s) 636
BmuI ACTGGG 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 773
BpuEI CTTGAG 1 cut(s) 1490
BsaBI GATNNNNATC 1 cut(s) 1130
BsaI GGTCTC 4 cut(s) 272, 1027, 1090, 1466
BsaJI CCNNGG 2 cut(s) 186, 208
BsaWI WCCGGW 1 cut(s) 679
BsaXI ACNNNNNCTCC 2 cut(s) 1299, 1329
Bsc4I CCNNNNNNNGG 3 cut(s) 424, 775, 1363
Bse118I RCCGGY 1 cut(s) 768
Bse1I ACTGG 5 cut(s) 88, 165, 468, 813, 1063
Bse3DI GCAATG 3 cut(s) 270, 474, 1493
Bse8I GATNNNNATC 1 cut(s) 1130
BseBI CCWGG 1 cut(s) 314
BseDI CCNNGG 2 cut(s) 186, 208
BseGI GGATG 3 cut(s) 567, 636, 1131
BseJI GATNNNNATC 1 cut(s) 1130
BseLI CCNNNNNNNGG 3 cut(s) 424, 775, 1363
BseMI GCAATG 3 cut(s) 270, 474, 1493
BseMII CTCAG 4 cut(s) 486, 810, 1289, 1477
BseNI ACTGG 5 cut(s) 88, 165, 468, 813, 1063
BseRI GAGGAG 3 cut(s) 830, 1108, 1487
BseXI GCAGC 7 cut(s) 463, 955, 1013, 1016, 1177, 1191, 1312
BseYI CCCAGC 2 cut(s) 145, 1372
BsgI GTGCAG 3 cut(s) 789, 933, 1008
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 1 cut(s) 317
BshNI GGYRCC 3 cut(s) 182, 293, 672
BsiHKAI GWGCWC 1 cut(s) 391
BsiHKCI CYCGRG 1 cut(s) 209
BsiSI CCGG 2 cut(s) 680, 769
BslFI GGGAC 1 cut(s) 1430
BslI CCNNNNNNNGG 3 cut(s) 424, 775, 1363
BsmAI GTCTC 6 cut(s) 272, 491, 1027, 1090, 1445, 1466
BsmBI CGTCTC 1 cut(s) 491
BsmFI GGGAC 1 cut(s) 1430
BsnI GGCC 1 cut(s) 317
Bso31I GGTCTC 4 cut(s) 272, 1027, 1090, 1466
BsoBI CYCGRG 1 cut(s) 209
Bsp1286I GDGCHC 1 cut(s) 391
Bsp143I GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
BspACI CCGC 2 cut(s) 228, 616
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 4 cut(s) 487, 809, 1290, 1476
BspFNI CGCG 1 cut(s) 123
BspLI GGNNCC 5 cut(s) 184, 295, 504, 674, 698
BspMAI CTGCAG 2 cut(s) 370, 1003
BspOI GCTAGC 1 cut(s) 636
BspPI GGATC 4 cut(s) 691, 704, 1069, 1159
BspQI GCTCTTC 1 cut(s) 1476
BspT107I GGYRCC 3 cut(s) 182, 293, 672
BspTNI GGTCTC 4 cut(s) 272, 1027, 1090, 1466
BsrDI GCAATG 3 cut(s) 270, 474, 1493
BsrFI RCCGGY 1 cut(s) 768
BsrI ACTGG 5 cut(s) 88, 165, 468, 813, 1063
BssAI RCCGGY 1 cut(s) 768
BssECI CCNNGG 2 cut(s) 186, 208
BssMI GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
Bst2UI CCWGG 1 cut(s) 314
Bst4CI ACNGT 1 cut(s) 1386
Bst6I CTCTTC 3 cut(s) 81, 120, 1476
BstAPI GCANNNNNTGC 2 cut(s) 473, 1424
BstC8I GCNNGC 3 cut(s) 474, 634, 956
BstDEI CTNAG 6 cut(s) 337, 495, 773, 796, 1298, 1463
BstDSI CCRYGG 1 cut(s) 186
BstF5I GGATG 3 cut(s) 567, 636, 1131
BstFNI CGCG 1 cut(s) 123
BstH2I RGCGCY 1 cut(s) 439
BstHHI GCGC 2 cut(s) 125, 438
BstKTI GATC 6 cut(s) 699, 939, 1064, 1134, 1154, 1269
BstMAI GTCTC 6 cut(s) 272, 491, 1027, 1090, 1445, 1466
BstMBI GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
BstMWI GCNNNNNNNGC 9 cut(s) 323, 473, 500, 829, 1010, 1190, 1196, 1331, 1424
BstNI CCWGG 1 cut(s) 314
BstNSI RCATGY 1 cut(s) 476
BstSCI CCNGG 1 cut(s) 312
BstSFI CTRYAG 3 cut(s) 366, 840, 999
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 7 cut(s) 463, 955, 1013, 1016, 1177, 1191, 1312
BstX2I RGATCY 2 cut(s) 696, 1266
BstXI CCANNNNNNTGG 1 cut(s) 1248
BstYI RGATCY 2 cut(s) 696, 1266
BsuRI GGCC 1 cut(s) 317
BtgI CCRYGG 1 cut(s) 186
BtsCI GGATG 3 cut(s) 567, 636, 1131
BtsI GCAGTG 1 cut(s) 1199
BtsIMutI CAGTG 2 cut(s) 806, 1199
Cac8I GCNNGC 3 cut(s) 474, 634, 956
CaiI CAGNNNCTG 2 cut(s) 803, 1007
CfoI GCGC 2 cut(s) 125, 438
Cfr10I RCCGGY 1 cut(s) 768
Cfr13I GGNCC 1 cut(s) 1238
CseI GACGC 2 cut(s) 351, 1019
Csp6I GTAC 2 cut(s) 241, 766
CspCI CAANNNNNGTGG 2 cut(s) 1395, 1430
CviAII CATG 6 cut(s) 237, 473, 734, 881, 1144, 1368
CviQI GTAC 2 cut(s) 241, 766
DdeI CTNAG 6 cut(s) 337, 495, 773, 796, 1298, 1463
DpnI GATC 6 cut(s) 698, 938, 1063, 1133, 1153, 1268
DpnII GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
DraI TTTAAA 1 cut(s) 741
DraIII CACNNNGTG 1 cut(s) 192
DriI GACNNNNNGTC 1 cut(s) 1458
Eam1104I CTCTTC 3 cut(s) 81, 120, 1476
Eam1105I GACNNNNNGTC 1 cut(s) 1458
EarI CTCTTC 3 cut(s) 81, 120, 1476
Ecl136II GAGCTC 1 cut(s) 389
Eco24I GRGCYC 1 cut(s) 391
Eco31I GGTCTC 4 cut(s) 272, 1027, 1090, 1466
Eco32I GATATC 2 cut(s) 99, 1260
Eco47I GGWCC 1 cut(s) 1238
Eco53kI GAGCTC 1 cut(s) 389
Eco88I CYCGRG 1 cut(s) 209
EcoICRI GAGCTC 1 cut(s) 389
EcoRI GAATTC 1 cut(s) 413
EcoRII CCWGG 1 cut(s) 312
EcoRV GATATC 2 cut(s) 99, 1260
EcoT22I ATGCAT 2 cut(s) 474, 735
EcoT38I GRGCYC 1 cut(s) 391
Esp3I CGTCTC 1 cut(s) 491
FaeI CATG 6 cut(s) 240, 476, 737, 884, 1147, 1371
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 1 cut(s) 1430
FatI CATG 6 cut(s) 236, 472, 733, 880, 1143, 1367
Fnu4HI GCNGC 7 cut(s) 477, 969, 1002, 1005, 1191, 1205, 1326
FokI GGATG 3 cut(s) 574, 623, 1138
FriOI GRGCYC 1 cut(s) 391
Fsp4HI GCNGC 7 cut(s) 477, 969, 1002, 1005, 1191, 1205, 1326
FspBI CTAG 5 cut(s) 276, 633, 690, 1337, 1495
GlaI GCGC 2 cut(s) 124, 437
GluI GCNGC 7 cut(s) 477, 969, 1002, 1005, 1191, 1205, 1326
GsaI CCCAGC 2 cut(s) 149, 1376
HaeII RGCGCY 1 cut(s) 439
HaeIII GGCC 1 cut(s) 317
HapII CCGG 2 cut(s) 680, 769
HgaI GACGC 2 cut(s) 351, 1019
HhaI GCGC 2 cut(s) 125, 438
Hin1II CATG 6 cut(s) 240, 476, 737, 884, 1147, 1371
Hin6I GCGC 2 cut(s) 123, 436
HinP1I GCGC 2 cut(s) 123, 436
HincII GTYRAC 1 cut(s) 524
HindII GTYRAC 1 cut(s) 524
HinfI GANTC 2 cut(s) 683, 794
HpaII CCGG 2 cut(s) 680, 769
HphI GGTGA 8 cut(s) 40, 62, 341, 439, 678, 803, 857, 1141
Hpy166II GTNNAC 2 cut(s) 524, 598
Hpy188I TCNGA 1 cut(s) 1264
Hpy188III TCNNGA 3 cut(s) 152, 1168, 1469
Hpy8I GTNNAC 2 cut(s) 524, 598
HpyAV CCTTC 4 cut(s) 149, 328, 336, 710
HpyCH4III ACNGT 1 cut(s) 1386
HpyCH4IV ACGT 1 cut(s) 757
HpyF10VI GCNNNNNNNGC 9 cut(s) 323, 473, 500, 829, 1010, 1190, 1196, 1331, 1424
HpyF3I CTNAG 6 cut(s) 337, 495, 773, 796, 1298, 1463
HpySE526I ACGT 1 cut(s) 757
Hsp92II CATG 6 cut(s) 240, 476, 737, 884, 1147, 1371
HspAI GCGC 2 cut(s) 123, 436
Kzo9I GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
LguI GCTCTTC 1 cut(s) 1476
LmnI GCTCC 7 cut(s) 386, 484, 508, 629, 805, 1376, 1403
Lsp1109I GCAGC 7 cut(s) 463, 955, 1013, 1016, 1177, 1191, 1312
LweI GCATC 5 cut(s) 14, 645, 810, 980, 1427
MaeI CTAG 5 cut(s) 276, 633, 690, 1337, 1495
MaeII ACGT 1 cut(s) 757
MaeIII GTNAC 5 cut(s) 28, 50, 684, 791, 1339
MalI GATC 6 cut(s) 698, 938, 1063, 1133, 1153, 1268
MboI GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
MboII GAAGA 9 cut(s) 3, 6, 68, 107, 110, 860, 1261, 1429, 1493
MfeI CAATTG 2 cut(s) 1194, 1242
MflI RGATCY 2 cut(s) 696, 1266
MhlI GDGCHC 1 cut(s) 391
MlyI GAGTC 2 cut(s) 692, 788
MmeI TCCRAC 1 cut(s) 955
Mph1103I ATGCAT 2 cut(s) 474, 735
MseI TTAA 3 cut(s) 224, 740, 1277
MslI CAYNNNNRTG 1 cut(s) 691
MspA1I CMGCKG 3 cut(s) 1007, 1067, 1184
MspI CCGG 2 cut(s) 680, 769
MspR9I CCNGG 1 cut(s) 314
MunI CAATTG 2 cut(s) 1194, 1242
MvaI CCWGG 1 cut(s) 314
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 9 cut(s) 323, 473, 500, 829, 1010, 1190, 1196, 1331, 1424
NdeII GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
NheI GCTAGC 1 cut(s) 632
NlaIII CATG 6 cut(s) 240, 476, 737, 884, 1147, 1371
NlaIV GGNNCC 5 cut(s) 184, 295, 504, 674, 698
NmuCI GTSAC 5 cut(s) 28, 50, 684, 791, 1339
NsiI ATGCAT 2 cut(s) 474, 735
NspI RCATGY 1 cut(s) 476
PaeI GCATGC 1 cut(s) 476
PciSI GCTCTTC 1 cut(s) 1476
PkrI GCNGC 7 cut(s) 478, 970, 1003, 1006, 1192, 1206, 1327
PleI GAGTC 2 cut(s) 691, 788
PpsI GAGTC 2 cut(s) 691, 788
Psp124BI GAGCTC 1 cut(s) 391
Psp6I CCWGG 1 cut(s) 312
PspFI CCCAGC 2 cut(s) 145, 1372
PspGI CCWGG 1 cut(s) 312
PspN4I GGNNCC 5 cut(s) 184, 295, 504, 674, 698
PspPI GGNCC 1 cut(s) 1238
PstI CTGCAG 2 cut(s) 370, 1003
PstNI CAGNNNCTG 2 cut(s) 803, 1007
PsuI RGATCY 2 cut(s) 696, 1266
PvuII CAGCTG 3 cut(s) 1007, 1067, 1184
RsaI GTAC 2 cut(s) 242, 767
RsaNI GTAC 2 cut(s) 241, 766
RseI CAYNNNNRTG 1 cut(s) 691
SacI GAGCTC 1 cut(s) 391
SapI GCTCTTC 1 cut(s) 1476
SaqAI TTAA 3 cut(s) 224, 740, 1277
SatI GCNGC 7 cut(s) 477, 969, 1002, 1005, 1191, 1205, 1326
Sau3AI GATC 6 cut(s) 696, 936, 1061, 1131, 1151, 1266
Sau96I GGNCC 1 cut(s) 1238
SchI GAGTC 2 cut(s) 692, 788
ScrFI CCNGG 1 cut(s) 314
SduI GDGCHC 1 cut(s) 391
SfaNI GCATC 5 cut(s) 14, 645, 810, 980, 1427
SfcI CTRYAG 3 cut(s) 366, 840, 999
SinI GGWCC 1 cut(s) 1238
SmiMI CAYNNNNRTG 1 cut(s) 691
SmlI CTYRAG 1 cut(s) 1469
SmoI CTYRAG 1 cut(s) 1469
SpeI ACTAGT 1 cut(s) 1336
SphI GCATGC 1 cut(s) 476
SsiI CCGC 2 cut(s) 228, 616
SspI AATATT 1 cut(s) 129
SspMI CTAG 5 cut(s) 276, 633, 690, 1337, 1495
SstI GAGCTC 1 cut(s) 391
StyD4I CCNGG 1 cut(s) 312
TaaI ACNGT 1 cut(s) 1386
TaiI ACGT 1 cut(s) 760
Tru1I TTAA 3 cut(s) 224, 740, 1277
Tru9I TTAA 3 cut(s) 224, 740, 1277
TscAI CASTG 2 cut(s) 813, 1206
TseFI GTSAC 5 cut(s) 28, 50, 684, 791, 1339
TseI GCWGC 7 cut(s) 476, 968, 1001, 1004, 1190, 1204, 1325
Tsp45I GTSAC 5 cut(s) 28, 50, 684, 791, 1339
TspDTI ATGAA 5 cut(s) 869, 1132, 1188, 1420, 1429
TspRI CASTG 2 cut(s) 813, 1206
VpaK11BI GGWCC 1 cut(s) 1238
XapI RAATTY 2 cut(s) 413, 1318
XceI RCATGY 1 cut(s) 476
XspI CTAG 5 cut(s) 276, 633, 690, 1337, 1495
Zsp2I ATGCAT 2 cut(s) 474, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.