MD07G1308300.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
36412223 .. 36416359
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1308300.v1.1.491

Sequence Viewer

Length: 1506 bp
ATGGCGTCCGATCCTGAGCAACACGCGCCCTCTTCTCTCGGAAAGGTGGGGAAATCTTCAGGTGAAATTGGCGACGCACAGGAGCCACTTCTTGAGGGGGCTCAGAATTCAGAAAACTATTCTCTTATTGCCGCAATCCTACCATTTCTATTCCCAGCTTTTGGAGGACTACTATATGGCTATGACATTGGCGCAACATCATGCGCTACAATTTCCATAGAGTCGGCCACATTAAGCGGAGTATCATGGTACAACTTGTCATCTGTGGAAATTGGTCTCATAACTAGTGGCTCATTATATGGGGCCTTGATTGGATCTTTGCTGGCCTTTAACATTGCTGACTTCTTAGGAAGAAGGAGGGAGTTGATTTTGGCTGCTTTATTGTATCTTCTCGGAGGCCTAGTAACAGCATTAGCACCCGACTTGCCTGTTATGGTGATTGGACGCCTCATATATGGTATAGGAATTGGACTGGCAATGCATGCTGCTCCGATGTATATTGCCGAGACAGCTCCAAGTGCGATACGAGGTCGCCTAATATCGCTCAAAGAGTTCTTCATAGTGCTTGGGATGGTTGCGGGTTATGGAATTGGTAGCCTTTTAGTTGACACAGTAGCTGGTTGGCGCTATATGTATGGAATTAGTGCCCCTTTAGCAATAATTATGGGTATTGGAATGTGGTGGCTACCCGCATCACCTAGATGGATCCTTCTGCGTGCCATACAGGGAAAAGGAAGTATGGATGAGTTAAAAGTGACTGCAATCAGTTGCTTGTGTCGGCTTAGGGGTAGTGCTATTGGTGATTCAGCTCCTGCACAAGTAGATGAGATACTGGCTGAGCTTGCTTATGTTGGTGAAGAGAAAGAAGCCACATTAGGGGAGATGTTCCATGGAAAATGCTTGAAAGCCCTTGTGATTGGTGTTGGATTAGTCTTGTTCCAACAGATCACAGGGCAACCAAGTGTGCTGTACTATGCTGCATCGATTTTTCAGAGTGCAGGATTCTCTGAAGCATCTGATGCAACACGGGTATCAATTTTACTTGGTGTTTTCAAGTTAATAATGACTGGAGCAGCTGTTCTTGTTGTTGATAGACTCGGGAGGAGACCTCTACTACTTGGAGGTGTTACGGGGATGGTCATCTCATTATTCCTTTTGGGATCATATTACCTTTTCTTTGATGATGCACCAGTTGCAGCTGTAGTTGCACTGCTGTTGTATGTTGGATGTTATCAGATATCTTTCGGTCCCATTGGTTGGCTAATGATATCAGAAGTATTCCCCTTACGGCTAAGGGGGCGAGGACTCGGTATAGCAGTGCTTGTGAATTTTGCTGCAAATGCACTGGTGACATTTGCATTTTCTCCTCTGAAGGCATTGCTGGGAGCTGGAATATTGTTTTATGCATTTGGAGTAATAGCAGTGGCATCTCTGTTTTTCATTTTCTTCATCGTCCCAGAGACCAAGGGGCTTACCCTTGAGGAAATTGAGGCCAATTGCCTTTAG

Protein Analysis

502

Amino Acids

52.98

Weight (kDa)

5.19

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 51 - 498 2e-99 Sugar (and other) transporter
MFS_1 PF07690 53 - 449 1e-31 Major Facilitator Superfamily
MFS_1 PF07690 349 - 490 6.9e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 161, 1257
AccII CGCG 1 cut(s) 26
AciI CCGC 4 cut(s) 132, 237, 578, 690
AclWI GGATC 5 cut(s) 5, 322, 700, 713, 1168
AcoI YGGCCR 1 cut(s) 225
AcsI RAATTY 2 cut(s) 106, 1327
AcuI CTGAAG 3 cut(s) 42, 1029, 1391
AcyI GRCGYC 2 cut(s) 5, 445
AfaI GTAC 2 cut(s) 251, 971
AfiI CCNNNNNNNGG 3 cut(s) 161, 876, 1257
AgsI TTSAA 2 cut(s) 904, 1054
AhlI ACTAGT 1 cut(s) 284
AloI GAACNNNNNNTCC 2 cut(s) 1062, 1094
AluBI AGCT 8 cut(s) 158, 512, 617, 809, 841, 1076, 1199, 1388
AluI AGCT 8 cut(s) 158, 512, 617, 809, 841, 1076, 1199, 1388
Alw26I GTCTC 4 cut(s) 281, 500, 1099, 1454
AlwI GGATC 5 cut(s) 5, 322, 700, 713, 1168
AlwNI CAGNNNCTG 2 cut(s) 617, 812
Ama87I CYCGRG 1 cut(s) 1097
AoxI GGCC 5 cut(s) 225, 303, 324, 397, 1491
ApeKI GCWGC 6 cut(s) 374, 485, 977, 1073, 1196, 1334
ApoI RAATTY 2 cut(s) 106, 1327
AspLEI GCGC 4 cut(s) 28, 194, 206, 627
AspS9I GGNCC 2 cut(s) 303, 1247
AsuHPI GGTGA 6 cut(s) 74, 448, 687, 812, 866, 1360
AvaI CYCGRG 1 cut(s) 1097
AvaII GGWCC 1 cut(s) 1247
BaeGI GKGCMC 1 cut(s) 649
BaeI ACNNNNGTAYC 2 cut(s) 1014, 1047
BamHI GGATCC 1 cut(s) 705
BanII GRGCYC 1 cut(s) 103
BbvI GCAGC 6 cut(s) 361, 472, 964, 1085, 1208, 1321
BccI CCATC 3 cut(s) 565, 696, 1129
BceAI ACGGC 1 cut(s) 1304
BcoDI GTCTC 4 cut(s) 281, 500, 1099, 1454
BcuI ACTAGT 1 cut(s) 284
BfaI CTAG 3 cut(s) 285, 401, 699
BfmI CTRYAG 1 cut(s) 1200
BfoI RGCGCY 1 cut(s) 628
BisI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
BlpI GCTNAGC 1 cut(s) 837
BlsI GCNGC 7 cut(s) 133, 376, 487, 979, 1075, 1198, 1336
Bme18I GGWCC 1 cut(s) 1247
BmeT110I CYCGRG 1 cut(s) 1097
BmgT120I GGNCC 2 cut(s) 303, 1247
BmiI GGNNCC 4 cut(s) 84, 304, 707, 1249
BmsI GCATC 6 cut(s) 701, 989, 1009, 1022, 1174, 1436
BplI GAGNNNNNCTC 2 cut(s) 1093, 1125
BpmI CTGGAG 1 cut(s) 1089
Bpu10I CCTNAGC 3 cut(s) 15, 782, 1292
Bpu1102I GCTNAGC 1 cut(s) 837
BpuEI CTTGAG 2 cut(s) 113, 1499
Bsa29I ATCGAT 1 cut(s) 983
BsaBI GATNNNNATC 1 cut(s) 1139
BsaHI GRCGYC 2 cut(s) 5, 445
BsaI GGTCTC 3 cut(s) 281, 1099, 1454
BsaJI CCNNGG 2 cut(s) 889, 1464
BsaXI ACNNNNNCTCC 4 cut(s) 387, 417, 1062, 1092
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 876, 1257
Bse1I ACTGG 5 cut(s) 477, 837, 1072, 1190, 1350
Bse3DI GCAATG 3 cut(s) 333, 483, 1376
Bse8I GATNNNNATC 1 cut(s) 1139
BseCI ATCGAT 1 cut(s) 983
BseDI CCNNGG 2 cut(s) 889, 1464
BseGI GGATG 4 cut(s) 576, 748, 1140, 1232
BseJI GATNNNNATC 1 cut(s) 1139
BseLI CCNNNNNNNGG 3 cut(s) 161, 876, 1257
BseMI GCAATG 3 cut(s) 333, 483, 1376
BseMII CTCAG 3 cut(s) 6, 116, 828
BseNI ACTGG 5 cut(s) 477, 837, 1072, 1190, 1350
BseRI GAGGAG 2 cut(s) 1117, 1356
BseSI GKGCMC 1 cut(s) 649
BseXI GCAGC 6 cut(s) 361, 472, 964, 1085, 1208, 1321
BseYI CCCAGC 2 cut(s) 154, 1381
BsgI GTGCAG 2 cut(s) 798, 1017
Bsh1236I CGCG 1 cut(s) 26
BshFI GGCC 5 cut(s) 227, 305, 326, 399, 1493
BshVI ATCGAT 1 cut(s) 983
BsiHKCI CYCGRG 1 cut(s) 1097
BslFI GGGAC 2 cut(s) 1233, 1439
BslI CCNNNNNNNGG 3 cut(s) 161, 876, 1257
BsmAI GTCTC 4 cut(s) 281, 500, 1099, 1454
BsmFI GGGAC 2 cut(s) 1233, 1439
BsnI GGCC 5 cut(s) 227, 305, 326, 399, 1493
Bso31I GGTCTC 3 cut(s) 281, 1099, 1454
BsoBI CYCGRG 1 cut(s) 1097
Bsp1286I GDGCHC 2 cut(s) 103, 649
Bsp143I GATC 5 cut(s) 10, 314, 705, 945, 1160
Bsp1720I GCTNAGC 1 cut(s) 837
Bsp19I CCATGG 1 cut(s) 889
BspACI CCGC 4 cut(s) 132, 237, 578, 690
BspANI GGCC 5 cut(s) 227, 305, 326, 399, 1493
BspCNI CTCAG 3 cut(s) 7, 115, 829
BspDI ATCGAT 1 cut(s) 983
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 4 cut(s) 84, 304, 707, 1249
BspPI GGATC 5 cut(s) 5, 322, 700, 713, 1168
BspTNI GGTCTC 3 cut(s) 281, 1099, 1454
BsrDI GCAATG 3 cut(s) 333, 483, 1376
BsrI ACTGG 5 cut(s) 477, 837, 1072, 1190, 1350
BssECI CCNNGG 2 cut(s) 889, 1464
BssMI GATC 5 cut(s) 10, 314, 705, 945, 1160
BssNI GRCGYC 2 cut(s) 5, 445
BssT1I CCWWGG 2 cut(s) 889, 1464
Bst4CI ACNGT 1 cut(s) 613
Bst6I CTCTTC 2 cut(s) 37, 852
BstACI GRCGYC 2 cut(s) 5, 445
BstAPI GCANNNNNTGC 3 cut(s) 482, 1019, 1193
BstC8I GCNNGC 4 cut(s) 324, 483, 717, 843
BstDEI CTNAG 6 cut(s) 15, 102, 346, 782, 837, 1292
BstDSI CCRYGG 1 cut(s) 889
BstF5I GGATG 4 cut(s) 576, 748, 1140, 1232
BstFNI CGCG 1 cut(s) 26
BstH2I RGCGCY 1 cut(s) 628
BstHHI GCGC 4 cut(s) 28, 194, 206, 627
BstKTI GATC 5 cut(s) 13, 317, 708, 948, 1163
BstMAI GTCTC 4 cut(s) 281, 500, 1099, 1454
BstMBI GATC 5 cut(s) 10, 314, 705, 945, 1160
BstNSI RCATGY 1 cut(s) 485
BstSFI CTRYAG 1 cut(s) 1200
BstSLI GKGCMC 1 cut(s) 649
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 6 cut(s) 361, 472, 964, 1085, 1208, 1321
BstX2I RGATCY 2 cut(s) 314, 705
BstYI RGATCY 2 cut(s) 314, 705
Bsu15I ATCGAT 1 cut(s) 983
BsuRI GGCC 5 cut(s) 227, 305, 326, 399, 1493
BsuTUI ATCGAT 1 cut(s) 983
BtgI CCRYGG 1 cut(s) 889
BtsCI GGATG 4 cut(s) 576, 748, 1140, 1232
BtsI GCAGTG 3 cut(s) 1208, 1323, 1428
BtsIMutI CAGTG 4 cut(s) 1208, 1323, 1343, 1428
Cac8I GCNNGC 4 cut(s) 324, 483, 717, 843
CaiI CAGNNNCTG 2 cut(s) 617, 812
CfoI GCGC 4 cut(s) 28, 194, 206, 627
Cfr13I GGNCC 2 cut(s) 303, 1247
ClaI ATCGAT 1 cut(s) 983
CseI GACGC 2 cut(s) 83, 453
Csp6I GTAC 2 cut(s) 250, 970
CviAII CATG 4 cut(s) 201, 246, 482, 890
CviQI GTAC 2 cut(s) 250, 970
DdeI CTNAG 6 cut(s) 15, 102, 346, 782, 837, 1292
DpnI GATC 5 cut(s) 12, 316, 707, 947, 1162
DpnII GATC 5 cut(s) 10, 314, 705, 945, 1160
EaeI YGGCCR 1 cut(s) 225
Eam1104I CTCTTC 2 cut(s) 37, 852
EarI CTCTTC 2 cut(s) 37, 852
Eco130I CCWWGG 2 cut(s) 889, 1464
Eco147I AGGCCT 1 cut(s) 399
Eco24I GRGCYC 1 cut(s) 103
Eco31I GGTCTC 3 cut(s) 281, 1099, 1454
Eco32I GATATC 2 cut(s) 1239, 1269
Eco47I GGWCC 1 cut(s) 1247
Eco57I CTGAAG 3 cut(s) 42, 1029, 1391
Eco88I CYCGRG 1 cut(s) 1097
EcoO109I RGGNCCY 1 cut(s) 303
EcoRI GAATTC 1 cut(s) 106
EcoRV GATATC 2 cut(s) 1239, 1269
EcoT14I CCWWGG 2 cut(s) 889, 1464
EcoT22I ATGCAT 2 cut(s) 483, 1408
EcoT38I GRGCYC 1 cut(s) 103
ErhI CCWWGG 2 cut(s) 889, 1464
FaeI CATG 4 cut(s) 204, 249, 485, 893
FaqI GGGAC 2 cut(s) 1233, 1439
FatI CATG 4 cut(s) 200, 245, 481, 889
FauI CCCGC 2 cut(s) 571, 697
Fnu4HI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
FokI GGATG 4 cut(s) 583, 755, 1147, 1239
FriOI GRGCYC 1 cut(s) 103
Fsp4HI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
FspBI CTAG 3 cut(s) 285, 401, 699
GlaI GCGC 4 cut(s) 27, 193, 205, 626
GluI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
GsaI CCCAGC 2 cut(s) 158, 1385
GsuI CTGGAG 1 cut(s) 1089
HaeII RGCGCY 1 cut(s) 628
HaeIII GGCC 5 cut(s) 227, 305, 326, 399, 1493
HgaI GACGC 2 cut(s) 83, 453
HhaI GCGC 4 cut(s) 28, 194, 206, 627
Hin1I GRCGYC 2 cut(s) 5, 445
Hin1II CATG 4 cut(s) 204, 249, 485, 893
Hin6I GCGC 4 cut(s) 26, 192, 204, 625
HinP1I GCGC 4 cut(s) 26, 192, 204, 625
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HinfI GANTC 5 cut(s) 221, 803, 1002, 1095, 1305
HphI GGTGA 6 cut(s) 74, 448, 687, 812, 866, 1360
Hpy166II GTNNAC 1 cut(s) 607
Hpy188III TCNNGA 3 cut(s) 14, 92, 1099
Hpy8I GTNNAC 1 cut(s) 607
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 3 cut(s) 348, 719, 1366
HpyCH4III ACNGT 1 cut(s) 613
HpyF3I CTNAG 6 cut(s) 15, 102, 346, 782, 837, 1292
Hsp92I GRCGYC 2 cut(s) 5, 445
Hsp92II CATG 4 cut(s) 204, 249, 485, 893
HspAI GCGC 4 cut(s) 26, 192, 204, 625
Kzo9I GATC 5 cut(s) 10, 314, 705, 945, 1160
LmnI GCTCC 6 cut(s) 82, 493, 517, 814, 1070, 1385
Lsp1109I GCAGC 6 cut(s) 361, 472, 964, 1085, 1208, 1321
LweI GCATC 6 cut(s) 701, 989, 1009, 1022, 1174, 1436
MaeI CTAG 3 cut(s) 285, 401, 699
MaeIII GTNAC 4 cut(s) 403, 754, 1126, 1348
MalI GATC 5 cut(s) 12, 316, 707, 947, 1162
MboI GATC 5 cut(s) 10, 314, 705, 945, 1160
MboII GAAGA 7 cut(s) 24, 48, 363, 380, 547, 869, 1438
MfeI CAATTG 1 cut(s) 1495
MflI RGATCY 2 cut(s) 314, 705
MhlI GDGCHC 2 cut(s) 103, 649
MlyI GAGTC 3 cut(s) 230, 1089, 1299
MmeI TCCRAC 3 cut(s) 904, 964, 1204
Mph1103I ATGCAT 2 cut(s) 483, 1408
MseI TTAA 4 cut(s) 233, 330, 749, 1058
MslI CAYNNNNRTG 1 cut(s) 700
MspA1I CMGCKG 2 cut(s) 1076, 1199
MunI CAATTG 1 cut(s) 1495
MvnI CGCG 1 cut(s) 26
NcoI CCATGG 1 cut(s) 889
NdeII GATC 5 cut(s) 10, 314, 705, 945, 1160
NlaIII CATG 4 cut(s) 204, 249, 485, 893
NlaIV GGNNCC 4 cut(s) 84, 304, 707, 1249
NmeAIII GCCGAG 1 cut(s) 529
NmuCI GTSAC 2 cut(s) 754, 1348
NsiI ATGCAT 2 cut(s) 483, 1408
NspI RCATGY 1 cut(s) 485
PaeI GCATGC 1 cut(s) 485
PceI AGGCCT 1 cut(s) 399
PfeI GAWTC 2 cut(s) 803, 1002
PflMI CCANNNNNTGG 2 cut(s) 161, 1257
PkrI GCNGC 7 cut(s) 133, 376, 487, 979, 1075, 1198, 1336
PleI GAGTC 3 cut(s) 229, 1089, 1299
PpsI GAGTC 3 cut(s) 229, 1089, 1299
PspFI CCCAGC 2 cut(s) 154, 1381
PspN4I GGNNCC 4 cut(s) 84, 304, 707, 1249
PspPI GGNCC 2 cut(s) 303, 1247
PstNI CAGNNNCTG 2 cut(s) 617, 812
PsuI RGATCY 2 cut(s) 314, 705
PvuII CAGCTG 2 cut(s) 1076, 1199
RsaI GTAC 2 cut(s) 251, 971
RsaNI GTAC 2 cut(s) 250, 970
RseI CAYNNNNRTG 1 cut(s) 700
SaqAI TTAA 4 cut(s) 233, 330, 749, 1058
SatI GCNGC 7 cut(s) 132, 375, 486, 978, 1074, 1197, 1335
Sau3AI GATC 5 cut(s) 10, 314, 705, 945, 1160
Sau96I GGNCC 2 cut(s) 303, 1247
SchI GAGTC 3 cut(s) 230, 1089, 1299
SduI GDGCHC 2 cut(s) 103, 649
SfaNI GCATC 6 cut(s) 701, 989, 1009, 1022, 1174, 1436
SfcI CTRYAG 1 cut(s) 1200
SinI GGWCC 1 cut(s) 1247
SmiMI CAYNNNNRTG 1 cut(s) 700
SmlI CTYRAG 2 cut(s) 92, 1478
SmoI CTYRAG 2 cut(s) 92, 1478
SpeI ACTAGT 1 cut(s) 284
SphI GCATGC 1 cut(s) 485
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 4 cut(s) 132, 237, 578, 690
SspI AATATT 1 cut(s) 1395
SspMI CTAG 3 cut(s) 285, 401, 699
StuI AGGCCT 1 cut(s) 399
StyI CCWWGG 2 cut(s) 889, 1464
TaaI ACNGT 1 cut(s) 613
TaqI TCGA 1 cut(s) 983
TaqII GACCGA 1 cut(s) 1235
TatI WGTACW 1 cut(s) 969
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 2 cut(s) 803, 1002
Tru1I TTAA 4 cut(s) 233, 330, 749, 1058
Tru9I TTAA 4 cut(s) 233, 330, 749, 1058
TscAI CASTG 4 cut(s) 1215, 1323, 1350, 1428
TseFI GTSAC 2 cut(s) 754, 1348
TseI GCWGC 6 cut(s) 374, 485, 977, 1073, 1196, 1334
Tsp45I GTSAC 2 cut(s) 754, 1348
TspDTI ATGAA 3 cut(s) 547, 1429, 1438
TspRI CASTG 4 cut(s) 1215, 1323, 1350, 1428
Van91I CCANNNNNTGG 2 cut(s) 161, 1257
VpaK11BI GGWCC 1 cut(s) 1247
XapI RAATTY 2 cut(s) 106, 1327
XceI RCATGY 1 cut(s) 485
XspI CTAG 3 cut(s) 285, 401, 699
Zsp2I ATGCAT 2 cut(s) 483, 1408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.