Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0009066

Physical Location & Seq

Genomic Coordinates Reverse (-)

17810848 .. 17812457

Gene Structure 1610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1087800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGGCTTATACATCAAGCTTCTGCGGCAATATTCATAATTATTGTGTAGCAGCTGTACTGCTGTTTTTCTCGAGCATGTCGTTGTCGCAGTCATCCAACGCAGCGGCAGTTAGCTACAATGTGATGAAGTTTGGTGCACGAGCAGATGGGACGACGGACTCGACGCAAGCATTCGTCAAGGCATGGGCGTCGGCGTGCAGCTCCGGCCAGGGCAATGCTGTCATGTACATCCCCAAAGGAAGGTTCTTGTTGAAGGCTGTGGTGTTTAGAGGTCCATGCAAGACCGGACAAGTTACAGTTCAAATAGACGGAACCCTTGTAGCCCCCACAGACTATAGGGCTTTGGGAAACTCAGGCTACTGGATTTTATTCATTAAGGTTACCGGACTTAGGGTCCTCGGTGGTTCCCTCGACGCCAGGGGGGCTGCATTTTGGGCTTGCAGGAAATCCGGCAAGAGTTGTCCTGTTGGAGCTAGGGTACGTACGCATATATATGCGGATTTAATAATTACTCACTATATTAATATAATATGTATAAATAATTATAATAATATATGTATACATGTGCAGTCTATAACGTTCAACTGGGCAAACAGCGTTCTGGTAAATGGCTTAACATCGATCAACAGTCAGGCAACCCACCTTGTAGTCAACAGCTGCAACAATGTGGTCGTTCGAAACGTGAAGCTGATCGCTCCGAGCGAAAGCCCCAACACAGATGGTATTCATGTGCAGAGCTCTACCGGTGTCACCATAACCGGCAGCATCTTGCAAACCGGTGACGATTGCATAGCAATCGGTCCCGGCACCAGAAACCTCCATATGAGCAACATCAAGTGTGGTCCAGGCCATGGTGTAAGCATTGGAAGCCTAGGCAGGAATCTCAAGGAAGATGGTGTCCAAAATGTAACCCTAACGAATGCAGTGTTCAGTGGATCAGACAATGGAGTACGAATAAAGTCATGGGCCAGGCCCAGCACTGGCTTCGTTAGGAACATAATCTTCCAAAACATCGTCATGAGAAACGTGAAAAACCCCATCATCATTGACCAGAGCTATTGCCCCCATAACCAAGGCTGTCCTTCTAAGAGTTCAGGTGTGACGATCAGTCAAGTGACGTACAGAAACATACAAGGGACGTCGCGAACGGCAGAGGCAGTAACGTTCGACTGCAGCCCTAGCACTCCATGTACTGGGATCAGATTGCAAGATATCAAGCTTACGTATCTGAATAAGGTTGCCACGTCATCGTGCAAAAACATTAGGGGAACCAGCACTGGACTGCTTATGCCAGATCCTTGCATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

436

Amino Acids

46.45

Weight (kDa)

9.4

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pect-lyase_RHGA_epim	PF12708	39 - 88	4.3e-07	Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28	PF00295	72 - 191	6.2e-09	Glycosyl hydrolases family 28
Glyco_hydro_28	PF00295	191 - 422	3.3e-74	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43890
fragaria_vesca	FvH4_1g00260 FvH4_7g26550
malus_domestica	MD00G1087800.v1.1 MD15G1143800.v1.1
prunus_persica	Prupe.7G269400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0084561 RchiOBHm_Chr2g0149621
rosa_laevigata	RLG00000015627 RLG00000020431
rosa_multiflora	Rmu_sc0006867.1_g000032
rosa_roxburghii	Rroxscaffold_2G00097870 Rroxscaffold_2G00155960
rosa_rugosa	Rorug01G0455100 Rorug02G0413500
rosa_samantha	Rh2BG485700 Rh2CG003200 Rh2DG003200
rosa_wichuraiana	Rw2G000280 Rw2G038630 Rw7G041010 Rw7G041030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AatII	GACGTC	1 cut(s)	1142
AccB1I	GGYRCC	1 cut(s)	806
AccB7I	CCANNNNNTGG	2 cut(s)	851, 1193
AccI	GTMKAC	1 cut(s)	559
AccII	CGCG	1 cut(s)	1144
AciI	CCGC	3 cut(s)	24, 104, 497
AclI	AACGTT	2 cut(s)	578, 1163
AclWI	GGATC	3 cut(s)	943, 1205, 1289
AcoI	YGGCCR	1 cut(s)	205
AcyI	GRCGYC	3 cut(s)	188, 414, 1139
AfaI	GTAC	7 cut(s)	57, 227, 480, 484, 951, 1121, 1192
AfiI	CCNNNNNNNGG	5 cut(s)	240, 390, 851, 980, 1193
AflIII	ACRYGT	1 cut(s)	562
AgeI	ACCGGT	2 cut(s)	743, 776
AgsI	TTSAA	3 cut(s)	253, 302, 583
AhdI	GACNNNNNGTC	2 cut(s)	392, 1107
AjiI	CACGTC	1 cut(s)	1245
AjnI	CCWGG	4 cut(s)	207, 416, 844, 968
AjuI	GAANNNNNNNTTGG	2 cut(s)	227, 259
Alw21I	GWGCWC	2 cut(s)	139, 740
Alw44I	GTGCAC	1 cut(s)	135
AlwI	GGATC	3 cut(s)	943, 1205, 1289
Ama87I	CYCGRG	1 cut(s)	70
AoxI	GGCC	4 cut(s)	205, 847, 966, 971
ApaLI	GTGCAC	1 cut(s)	135
ApeKI	GCWGC	7 cut(s)	50, 101, 198, 425, 657, 762, 1173
AseI	ATTAAT	1 cut(s)	522
AsiGI	ACCGGT	2 cut(s)	743, 776
AspA2I	CCTAGG	1 cut(s)	871
AspS9I	GGNCC	6 cut(s)	272, 394, 800, 842, 966, 972
AsuC2I	CCSGG	1 cut(s)	804
AsuHPI	GGTGA	2 cut(s)	742, 791
AsuII	TTCGAA	1 cut(s)	676
AvaI	CYCGRG	1 cut(s)	70
AvaII	GGWCC	4 cut(s)	272, 394, 800, 842
AvrII	CCTAGG	1 cut(s)	871
BaeGI	GKGCMC	1 cut(s)	139
BanI	GGYRCC	1 cut(s)	806
BanII	GRGCYC	1 cut(s)	740
BauI	CACGAG	1 cut(s)	138
Bbv12I	GWGCWC	2 cut(s)	139, 740
BbvI	GCAGC	7 cut(s)	62, 113, 210, 412, 644, 774, 1185
BccI	CCATC	4 cut(s)	140, 713, 887, 1046
BceAI	ACGGC	1 cut(s)	1164
BcgI	CGANNNNNNTGC	6 cut(s)	171, 205, 778, 812, 967, 1001
BciT130I	CCWGG	4 cut(s)	209, 418, 846, 970
BcnI	CCSGG	1 cut(s)	804
BfaI	CTAG	3 cut(s)	474, 872, 1179
BfmI	CTRYAG	2 cut(s)	334, 1171
BglI	GCCNNNNNGGC	1 cut(s)	422
BisI	GCNGC	9 cut(s)	25, 51, 102, 105, 199, 426, 658, 763, 1174
BlnI	CCTAGG	1 cut(s)	871
BlsI	GCNGC	9 cut(s)	26, 52, 103, 106, 200, 427, 659, 764, 1175
Bme1390I	CCNGG	5 cut(s)	209, 418, 804, 846, 970
Bme18I	GGWCC	4 cut(s)	272, 394, 800, 842
BmeRI	GACNNNNNGTC	2 cut(s)	392, 1107
BmeT110I	CYCGRG	1 cut(s)	70
BmgBI	CACGTC	1 cut(s)	1245
BmgT120I	GGNCC	6 cut(s)	272, 394, 800, 842, 966, 972
BmiI	GGNNCC	6 cut(s)	313, 395, 406, 802, 808, 1270
BmrFI	CCNGG	5 cut(s)	209, 418, 804, 846, 970
BmrI	ACTGGG	2 cut(s)	595, 1203
BmsI	GCATC	1 cut(s)	774
BmuI	ACTGGG	2 cut(s)	595, 1203
Bpu14I	TTCGAA	1 cut(s)	676
BpuEI	CTTGAG	1 cut(s)	869
BpuMI	CCSGG	1 cut(s)	804
Bsa29I	ATCGAT	1 cut(s)	620
BsaAI	YACGTR	2 cut(s)	482, 1224
BsaHI	GRCGYC	3 cut(s)	188, 414, 1139
BsaJI	CCNNGG	6 cut(s)	208, 397, 417, 850, 871, 1072
BsaWI	WCCGGW	4 cut(s)	284, 383, 743, 776
BsaXI	ACNNNNNCTCC	2 cut(s)	462, 492
Bsc4I	CCNNNNNNNGG	5 cut(s)	240, 390, 851, 980, 1193
Bse118I	RCCGGY	3 cut(s)	743, 758, 776
Bse1I	ACTGG	5 cut(s)	365, 590, 985, 1198, 1282
Bse3DI	GCAATG	1 cut(s)	220
BseBI	CCWGG	4 cut(s)	209, 418, 846, 970
BseCI	ATCGAT	1 cut(s)	620
BseDI	CCNNGG	6 cut(s)	208, 397, 417, 850, 871, 1072
BseGI	GGATG	2 cut(s)	92, 228
BseLI	CCNNNNNNNGG	5 cut(s)	240, 390, 851, 980, 1193
BseMI	GCAATG	1 cut(s)	220
BseMII	CTCAG	1 cut(s)	366
BseNI	ACTGG	5 cut(s)	365, 590, 985, 1198, 1282
BseSI	GKGCMC	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	62, 113, 210, 412, 644, 774, 1185
BseYI	CCCAGC	1 cut(s)	974
BsgI	GTGCAG	3 cut(s)	217, 587, 752
Bsh1236I	CGCG	1 cut(s)	1144
BshFI	GGCC	4 cut(s)	207, 849, 968, 973
BshNI	GGYRCC	1 cut(s)	806
BshTI	ACCGGT	2 cut(s)	743, 776
BshVI	ATCGAT	1 cut(s)	620
BsiHKAI	GWGCWC	2 cut(s)	139, 740
BsiHKCI	CYCGRG	1 cut(s)	70
BsiSI	CCGG	8 cut(s)	204, 285, 384, 450, 744, 759, 777, 804
BsiWI	CGTACG	1 cut(s)	482
BslFI	GGGAC	3 cut(s)	163, 786, 1150
BslI	CCNNNNNNNGG	5 cut(s)	240, 390, 851, 980, 1193
BsmFI	GGGAC	3 cut(s)	163, 786, 1150
BsmI	GAATGC	2 cut(s)	170, 925
BsnI	GGCC	4 cut(s)	207, 849, 968, 973
BsoBI	CYCGRG	1 cut(s)	70
Bsp119I	TTCGAA	1 cut(s)	676
Bsp1286I	GDGCHC	2 cut(s)	139, 740
Bsp1407I	TGTACA	1 cut(s)	225
Bsp143I	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
Bsp19I	CCATGG	1 cut(s)	850
Bsp68I	TCGCGA	1 cut(s)	1144
BspACI	CCGC	3 cut(s)	24, 104, 497
BspANI	GGCC	4 cut(s)	207, 849, 968, 973
BspCNI	CTCAG	1 cut(s)	365
BspDI	ATCGAT	1 cut(s)	620
BspFNI	CGCG	1 cut(s)	1144
BspHI	TCATGA	1 cut(s)	1017
BspLI	GGNNCC	6 cut(s)	313, 395, 406, 802, 808, 1270
BspMAI	CTGCAG	1 cut(s)	1175
BspPI	GGATC	3 cut(s)	943, 1205, 1289
BspT104I	TTCGAA	1 cut(s)	676
BspT107I	GGYRCC	1 cut(s)	806
BsrDI	GCAATG	1 cut(s)	220
BsrFI	RCCGGY	3 cut(s)	743, 758, 776
BsrGI	TGTACA	1 cut(s)	225
BsrI	ACTGG	5 cut(s)	365, 590, 985, 1198, 1282
BssAI	RCCGGY	3 cut(s)	743, 758, 776
BssECI	CCNNGG	6 cut(s)	208, 397, 417, 850, 871, 1072
BssMI	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
BssNAI	GTATAC	1 cut(s)	560
BssNI	GRCGYC	3 cut(s)	188, 414, 1139
BssSI	CACGAG	1 cut(s)	138
BssT1I	CCWWGG	3 cut(s)	850, 871, 1072
Bst1107I	GTATAC	1 cut(s)	560
Bst2BI	CACGAG	1 cut(s)	138
Bst2UI	CCWGG	4 cut(s)	209, 418, 846, 970
Bst4CI	ACNGT	2 cut(s)	298, 629
BstACI	GRCGYC	3 cut(s)	188, 414, 1139
BstAUI	TGTACA	1 cut(s)	225
BstBAI	YACGTR	2 cut(s)	482, 1224
BstBI	TTCGAA	1 cut(s)	676
BstC8I	GCNNGC	3 cut(s)	168, 196, 439
BstDEI	CTNAG	3 cut(s)	352, 389, 1086
BstDSI	CCRYGG	1 cut(s)	850
BstEII	GGTNACC	1 cut(s)	379
BstF5I	GGATG	2 cut(s)	92, 228
BstFNI	CGCG	1 cut(s)	1144
BstKTI	GATC	6 cut(s)	624, 693, 938, 1107, 1200, 1297
BstMBI	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 204, 422, 434, 867, 1179
BstNI	CCWGG	4 cut(s)	209, 418, 846, 970
BstNSI	RCATGY	2 cut(s)	79, 566
BstPI	GGTNACC	1 cut(s)	379
BstSCI	CCNGG	5 cut(s)	207, 416, 802, 844, 968
BstSFI	CTRYAG	2 cut(s)	334, 1171
BstSLI	GKGCMC	1 cut(s)	139
BstSNI	TACGTA	2 cut(s)	482, 1224
BstUI	CGCG	1 cut(s)	1144
BstV1I	GCAGC	7 cut(s)	62, 113, 210, 412, 644, 774, 1185
BstX2I	RGATCY	1 cut(s)	1294
BstYI	RGATCY	1 cut(s)	1294
BstZ17I	GTATAC	1 cut(s)	560
Bsu15I	ATCGAT	1 cut(s)	620
BsuRI	GGCC	4 cut(s)	207, 849, 968, 973
BsuTUI	ATCGAT	1 cut(s)	620
BtgI	CCRYGG	1 cut(s)	850
BtrI	CACGTC	1 cut(s)	1245
BtsCI	GGATG	2 cut(s)	92, 228
BtsI	GCAGTG	1 cut(s)	930
BtsIMutI	CAGTG	4 cut(s)	930, 937, 978, 1275
BtuMI	TCGCGA	1 cut(s)	1144
Cac8I	GCNNGC	3 cut(s)	168, 196, 439
CciI	TCATGA	1 cut(s)	1017
Cfr10I	RCCGGY	3 cut(s)	743, 758, 776
Cfr13I	GGNCC	6 cut(s)	272, 394, 800, 842, 966, 972
ClaI	ATCGAT	1 cut(s)	620
CseI	GACGC	3 cut(s)	172, 177, 422
Csp6I	GTAC	7 cut(s)	56, 226, 479, 483, 950, 1120, 1191
CspAI	ACCGGT	2 cut(s)	743, 776
CviQI	GTAC	7 cut(s)	56, 226, 479, 483, 950, 1120, 1191
DdeI	CTNAG	3 cut(s)	352, 389, 1086
DpnI	GATC	6 cut(s)	623, 692, 937, 1106, 1199, 1296
DpnII	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
DriI	GACNNNNNGTC	2 cut(s)	392, 1107
EaeI	YGGCCR	1 cut(s)	205
Eam1105I	GACNNNNNGTC	2 cut(s)	392, 1107
Ecl136II	GAGCTC	1 cut(s)	738
Eco105I	TACGTA	2 cut(s)	482, 1224
Eco130I	CCWWGG	3 cut(s)	850, 871, 1072
Eco24I	GRGCYC	1 cut(s)	740
Eco32I	GATATC	1 cut(s)	1213
Eco47I	GGWCC	4 cut(s)	272, 394, 800, 842
Eco53kI	GAGCTC	1 cut(s)	738
Eco88I	CYCGRG	1 cut(s)	70
Eco91I	GGTNACC	1 cut(s)	379
EcoICRI	GAGCTC	1 cut(s)	738
EcoO109I	RGGNCCY	1 cut(s)	394
EcoO65I	GGTNACC	1 cut(s)	379
EcoRII	CCWGG	4 cut(s)	207, 416, 844, 968
EcoRV	GATATC	1 cut(s)	1213
EcoT14I	CCWWGG	3 cut(s)	850, 871, 1072
EcoT38I	GRGCYC	1 cut(s)	740
ErhI	CCWWGG	3 cut(s)	850, 871, 1072
FaqI	GGGAC	3 cut(s)	163, 786, 1150
FauNDI	CATATG	1 cut(s)	822
FblI	GTMKAC	1 cut(s)	559
Fnu4HI	GCNGC	9 cut(s)	25, 51, 102, 105, 199, 426, 658, 763, 1174
FokI	GGATG	2 cut(s)	79, 215
FriOI	GRGCYC	1 cut(s)	740
Fsp4HI	GCNGC	9 cut(s)	25, 51, 102, 105, 199, 426, 658, 763, 1174
FspBI	CTAG	3 cut(s)	474, 872, 1179
GluI	GCNGC	9 cut(s)	25, 51, 102, 105, 199, 426, 658, 763, 1174
GsaI	CCCAGC	1 cut(s)	978
HaeIII	GGCC	4 cut(s)	207, 849, 968, 973
HapII	CCGG	8 cut(s)	204, 285, 384, 450, 744, 759, 777, 804
HgaI	GACGC	3 cut(s)	172, 177, 422
Hin1I	GRCGYC	3 cut(s)	188, 414, 1139
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HindIII	AAGCTT	2 cut(s)	16, 1217
HinfI	GANTC	2 cut(s)	158, 880
HpaII	CCGG	8 cut(s)	204, 285, 384, 450, 744, 759, 777, 804
HphI	GGTGA	2 cut(s)	742, 791
Hpy166II	GTNNAC	3 cut(s)	137, 560, 652
Hpy188I	TCNGA	4 cut(s)	699, 940, 1202, 1230
Hpy188III	TCNNGA	3 cut(s)	70, 1018, 1143
Hpy8I	GTNNAC	3 cut(s)	137, 560, 652
Hpy99I	CGWCG	5 cut(s)	157, 166, 193, 416, 1144
HpyAV	CCTTC	3 cut(s)	234, 247, 1092
HpyCH4III	ACNGT	2 cut(s)	298, 629
HpyCH4IV	ACGT	9 cut(s)	481, 578, 681, 1026, 1118, 1139, 1163, 1223, 1244
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 204, 422, 434, 867, 1179
HpyF3I	CTNAG	3 cut(s)	352, 389, 1086
HpySE526I	ACGT	9 cut(s)	481, 578, 681, 1026, 1118, 1139, 1163, 1223, 1244
Hsp92I	GRCGYC	3 cut(s)	188, 414, 1139
Kzo9I	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
LmnI	GCTCC	3 cut(s)	206, 470, 700
Lsp1109I	GCAGC	7 cut(s)	62, 113, 210, 412, 644, 774, 1185
LweI	GCATC	1 cut(s)	774
MaeI	CTAG	3 cut(s)	474, 872, 1179
MaeII	ACGT	9 cut(s)	481, 578, 681, 1026, 1118, 1139, 1163, 1223, 1244
MaeIII	GTNAC	8 cut(s)	292, 379, 748, 779, 907, 1099, 1114, 1159
MalI	GATC	6 cut(s)	623, 692, 937, 1106, 1199, 1296
MboI	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
MboII	GAAGA	2 cut(s)	902, 994
MflI	RGATCY	1 cut(s)	1294
MhlI	GDGCHC	2 cut(s)	139, 740
MluCI	AATT	3 cut(s)	37, 507, 541
MlyI	GAGTC	1 cut(s)	152
MmeI	TCCRAC	2 cut(s)	120, 448
MnlI	CCTC	5 cut(s)	263, 407, 419, 827, 1147
MseI	TTAA	4 cut(s)	375, 503, 522, 614
MslI	CAYNNNNRTG	2 cut(s)	492, 1016
MspA1I	CMGCKG	3 cut(s)	53, 104, 657
MspI	CCGG	8 cut(s)	204, 285, 384, 450, 744, 759, 777, 804
MspR9I	CCNGG	5 cut(s)	209, 418, 804, 846, 970
Mva1269I	GAATGC	2 cut(s)	170, 925
MvaI	CCWGG	4 cut(s)	209, 418, 846, 970
MvnI	CGCG	1 cut(s)	1144
MwoI	GCNNNNNNNGC	6 cut(s)	24, 204, 422, 434, 867, 1179
NciI	CCSGG	1 cut(s)	804
NcoI	CCATGG	1 cut(s)	850
NdeI	CATATG	1 cut(s)	822
NdeII	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
NlaIV	GGNNCC	6 cut(s)	313, 395, 406, 802, 808, 1270
NmuCI	GTSAC	4 cut(s)	748, 779, 1099, 1114
NruI	TCGCGA	1 cut(s)	1144
NspI	RCATGY	2 cut(s)	79, 566
NspV	TTCGAA	1 cut(s)	676
PaeR7I	CTCGAG	1 cut(s)	70
PagI	TCATGA	1 cut(s)	1017
PciI	ACATGT	1 cut(s)	562
PcsI	WCGNNNNNNNCGW	4 cut(s)	77, 158, 678, 699
PctI	GAATGC	2 cut(s)	170, 925
PfeI	GAWTC	1 cut(s)	880
Pfl23II	CGTACG	1 cut(s)	482
PflMI	CCANNNNNTGG	2 cut(s)	851, 1193
PinAI	ACCGGT	2 cut(s)	743, 776
PkrI	GCNGC	9 cut(s)	26, 52, 103, 106, 200, 427, 659, 764, 1175
PleI	GAGTC	1 cut(s)	152
PpsI	GAGTC	1 cut(s)	152
Ppu21I	YACGTR	2 cut(s)	482, 1224
PpuMI	RGGWCCY	1 cut(s)	394
PscI	ACATGT	1 cut(s)	562
PshBI	ATTAAT	1 cut(s)	522
PsiI	TTATAA	1 cut(s)	546
Psp124BI	GAGCTC	1 cut(s)	740
Psp1406I	AACGTT	2 cut(s)	578, 1163
Psp5II	RGGWCCY	1 cut(s)	394
Psp6I	CCWGG	4 cut(s)	207, 416, 844, 968
PspEI	GGTNACC	1 cut(s)	379
PspFI	CCCAGC	1 cut(s)	974
PspGI	CCWGG	4 cut(s)	207, 416, 844, 968
PspLI	CGTACG	1 cut(s)	482
PspN4I	GGNNCC	6 cut(s)	313, 395, 406, 802, 808, 1270
PspPI	GGNCC	6 cut(s)	272, 394, 800, 842, 966, 972
PspPPI	RGGWCCY	1 cut(s)	394
PstI	CTGCAG	1 cut(s)	1175
PsuI	RGATCY	1 cut(s)	1294
PvuII	CAGCTG	2 cut(s)	53, 657
RruI	TCGCGA	1 cut(s)	1144
RsaI	GTAC	7 cut(s)	57, 227, 480, 484, 951, 1121, 1192
RsaNI	GTAC	7 cut(s)	56, 226, 479, 483, 950, 1120, 1191
RseI	CAYNNNNRTG	2 cut(s)	492, 1016
SacI	GAGCTC	1 cut(s)	740
SaqAI	TTAA	4 cut(s)	375, 503, 522, 614
SatI	GCNGC	9 cut(s)	25, 51, 102, 105, 199, 426, 658, 763, 1174
Sau3AI	GATC	6 cut(s)	621, 690, 935, 1104, 1197, 1294
Sau96I	GGNCC	6 cut(s)	272, 394, 800, 842, 966, 972
SchI	GAGTC	1 cut(s)	152
ScrFI	CCNGG	5 cut(s)	209, 418, 804, 846, 970
SduI	GDGCHC	2 cut(s)	139, 740
SfaNI	GCATC	1 cut(s)	774
SfcI	CTRYAG	2 cut(s)	334, 1171
Sfr274I	CTCGAG	1 cut(s)	70
SfuI	TTCGAA	1 cut(s)	676
SinI	GGWCC	4 cut(s)	272, 394, 800, 842
SlaI	CTCGAG	1 cut(s)	70
SmiMI	CAYNNNNRTG	2 cut(s)	492, 1016
SmlI	CTYRAG	2 cut(s)	70, 884
SmoI	CTYRAG	2 cut(s)	70, 884
SnaBI	TACGTA	2 cut(s)	482, 1224
Sse9I	AATT	3 cut(s)	37, 507, 541
SsiI	CCGC	3 cut(s)	24, 104, 497
SspI	AATATT	1 cut(s)	31
SspMI	CTAG	3 cut(s)	474, 872, 1179
SstI	GAGCTC	1 cut(s)	740
StyD4I	CCNGG	5 cut(s)	207, 416, 802, 844, 968
StyI	CCWWGG	3 cut(s)	850, 871, 1072
TaaI	ACNGT	2 cut(s)	298, 629
TaiI	ACGT	9 cut(s)	484, 581, 684, 1029, 1121, 1142, 1166, 1226, 1247
TaqI	TCGA	6 cut(s)	71, 161, 411, 620, 676, 1167
TaqII	GACCGA	1 cut(s)	788
TasI	AATT	3 cut(s)	37, 507, 541
TatI	WGTACW	3 cut(s)	55, 225, 1190
TauI	GCSGC	2 cut(s)	27, 107
TfiI	GAWTC	1 cut(s)	880
Tru1I	TTAA	4 cut(s)	375, 503, 522, 614
Tru9I	TTAA	4 cut(s)	375, 503, 522, 614
TscAI	CASTG	4 cut(s)	930, 937, 985, 1282
TseFI	GTSAC	4 cut(s)	748, 779, 1099, 1114
TseI	GCWGC	7 cut(s)	50, 101, 198, 425, 657, 762, 1173
Tsp45I	GTSAC	4 cut(s)	748, 779, 1099, 1114
TspDTI	ATGAA	4 cut(s)	23, 140, 361, 716
TspGWI	ACGGA	2 cut(s)	170, 324
TspRI	CASTG	4 cut(s)	930, 937, 985, 1282
Van91I	CCANNNNNTGG	2 cut(s)	851, 1193
VneI	GTGCAC	1 cut(s)	135
VpaK11BI	GGWCC	4 cut(s)	272, 394, 800, 842
VspI	ATTAAT	1 cut(s)	522
XceI	RCATGY	2 cut(s)	79, 566
XhoI	CTCGAG	1 cut(s)	70
XmaJI	CCTAGG	1 cut(s)	871
XmiI	GTMKAC	1 cut(s)	559
XspI	CTAG	3 cut(s)	474, 872, 1179
ZraI	GACGTC	1 cut(s)	1140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.